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2024-06-17 07:13:23

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 179

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Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA S2751 putative ATP synthase beta subunitRecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; chromosome CDS2641023 741 - 0.547908
NA S1534 hypothetical proteinRecName: Full=RutC family protein YoaB; chromosome CDS1493507 393 - 0.506361
NA S1083 hypothetical proteinRecName: Full=Putative aminoacrylate peracid reductase RutC; EC=1.-.-.-; chromosome CDS1064065 387 - 0.537468
alaS S2911 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS2787515 2631 - 0.537438
ansA S1571 cytoplasmic L-asparaginase ISubName: Full=Cytoplasmic L-asparaginase I; chromosome CDS1529251 1017 - 0.508358
ansB S3157 periplasmic L-asparaginase IISubName: Full=Periplasmic L-asparaginase II; chromosome CDS3033957 1047 - 0.52531
argS S2007 arginine tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS1930222 1734 + 0.529988
asnS S0991 asparagine tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS976776 1401 - 0.528194
aspS S1942 aspartate tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS1881818 1773 - 0.538071
cafA S3502 ribonuclease GRecName: Full=Ribonuclease G; Short=RNase G; EC=3.1.26.-; AltName: Full=Cytoplasmic axial filament protein; chromosome CDS3373980 1470 - 0.521088
cca S3302 tRNA nucleotidyl transferaseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS3179679 1239 + 0.561743
cysS S0465 cysteine tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS472936 1386 + 0.547619
dbpA S1447 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1410534 1368 + 0.516082
deaD S3420 inducible ATP-independent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3289294 1941 - 0.555384
def S3543 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS3406690 510 + 0.462745
efp S4570 elongation factor P (EF-P)RecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4472279 567 + 0.497355
fmt S3544 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS3407214 948 + 0.525316
frr S0165 ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS183303 558 + 0.508961
ftsJ S3437 cell division proteinRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS3310335 630 - 0.501587
fusA S4404 GTP-binding protein chain elongation factor EF-GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS4330060 1968 + 0.508638
glnS S0624 glutamine tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS640196 1665 - 0.524324
gltX S2605 glutamate tRNA synthetase, catalytic subunitRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2498807 1416 - 0.525424
glyQ S4165 glycine tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS4068237 912 + 0.558114
glyS S4166 glycine tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS4069158 2070 + 0.557005
gshB S3142 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; chromosome CDS3022370 951 + 0.535226
hemK S1299 possible protoporphyrinogen oxidaseRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS1262690 834 + 0.551559
hisS S2732 histidine tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS2622342 1275 - 0.543529
ileS S0025 isoleucine tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS21345 2817 + 0.556621
infA S0884 protein chain initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS872410 219 - 0.484018
infB S3426 protein chain initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS3296665 2649 - 0.534541
infC S1631 protein chain initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS1584854 435 + 0.473563
iucB S4055 siderophore biosynthesis proteinSubName: Full=Siderophore biosynthesis protein; chromosome CDS3951736 948 - 0.564346
ksgA S0050 S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS50413 822 - 0.534063
lasT S4706 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4598644 687 + 0.502183
leuS S0661 leucine tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS671969 2583 + 0.533875
lysS S3075 lysine tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS2959661 1518 - 0.528986
map S0161 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS179143 795 - 0.50566
miaA S4594 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS4496230 951 + 0.534175
pcnB S0138 poly(A) polymerase IRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; chromosome CDS148998 1365 - 0.557509
pheS S1634 phenylalanine tRNA synthetase, alpha-subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1586441 984 + 0.539634
pnp S3422 polynucleotide phosphorylaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS3292356 2205 - 0.535147
prfA S1298 peptide chain release factor RF-1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS1261608 1083 + 0.530009
prfB S3076 peptide chain release factor RF-2RecName: Full=Peptide chain release factor 2; Short=RF-2; chromosome CDS2961188 1099 - 0.532302
prfC S4678 peptide chain release factor RF-3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS4568436 1590 + 0.535849
prfH S0305 probable peptide chain release factorSubName: Full=Probable peptide chain release factor; chromosome CDS304523 456 + 0.563596
prmA S3514 methylase for 50S ribosomal subunit protein L11RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS3386724 882 + 0.544218
proS S0187 proline tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS207442 1719 - 0.544503
pth S1291 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1254525 585 - 0.500855
queA S0350 probable S-adenosylmethionine:tRNA ribosyltransferase-isomeraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS353645 1071 + 0.539683
rbfA S3425 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS3296100 402 - 0.529851
relE S1669 hypothetical proteinRecName: Full=mRNA interferase RelE; EC=3.1.-.-; AltName: Full=Endoribonuclease RelE; AltName: Full=Toxin RelE; chromosome CDS1620096 288 - 0.46875
rhlB S3906 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS3799099 1266 + 0.524487
rhlE S0788 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS769856 1221 + 0.553645
rimJ S1150 ribosomal-protein-alanine acetyltransferaseRecName: Full=Ribosomal-protein-alanine acetyltransferase; EC=2.3.1.128; AltName: Full=Acetylating enzyme for N-terminal of ribosomal protein S5; chromosome CDS1116215 585 + 0.495726
rimK S0848 ribosomal protein S6 modification proteinRecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Poly-alpha-glutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; chromosome CDS833540 903 + 0.555925
rimL S1491 ribosomal-protein-serine acetyltransferaseSubName: Full=Ribosomal-protein-serine acetyltransferase; chromosome CDS1453348 537 + 0.439479
rmf S1019 ribosome modulation factorRecName: Full=Ribosome modulation factor; Short=RMF; chromosome CDS1006747 168 + 0.547619
rna S0535 RNase ISubName: Full=RNase I; chromosome CDS545935 825 - 0.509091
rnd S1539 RNase DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1499240 1116 + 0.543011
rne S1168 RNase ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS1131785 3183 - 0.558278
rnpA S4011 RNase P, protein component; protein C5RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS3906329 360 + 0.561111
rph S4086 RNase PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome CDS3988393 717 + 0.563459
rplA S3678 50S ribosomal subunit protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS3573883 705 - 0.513475
rplB S4413 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS4336957 822 + 0.526764
rplC S4410 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS4335395 630 + 0.514286
rplD S4411 50S ribosomal subunit protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS4336035 606 + 0.529703
rplE S4422 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS4340883 540 + 0.498148
rplF S4425 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS4342181 534 + 0.524345
rplI S4628 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS4522545 450 + 0.497778
rplJ S3677 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS3572973 498 - 0.524096
rplK S3679 50S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS3574591 429 - 0.522144
rplL S3676 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; AltName: Full=L8; chromosome CDS3572541 366 - 0.461749
rplM S3486 50S ribosomal subunit protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS3356178 429 - 0.503497
rplN S4420 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS4340172 372 + 0.510753
rplO S4429 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS4343782 435 + 0.535632
rplP S4417 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS4339152 411 + 0.518248
rplQ S4436 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS4348322 384 + 0.536458
rplR S4426 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS4342724 354 + 0.536723
rplS S2843 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS2737468 348 - 0.482759
rplT S1633 50S ribosomal subunit protein L20/regulatorRecName: Full=50S ribosomal protein L20; chromosome CDS1585635 357 + 0.481793
rplU S3444 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS3316440 312 - 0.483974
rplV S4415 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS4338088 333 + 0.495495
rplW S4412 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS4336637 303 + 0.481848
rplX S4421 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS4340554 315 + 0.460317
rplY S2401 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS2285174 285 + 0.498246
rpmA S3443 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS3316162 258 - 0.496124
rpmB S4092 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS3993269 237 + 0.531646
rpmC S4418 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS4339562 192 + 0.536458
rpmD S4428 50S ribosomal subunit protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS4343599 180 + 0.494444
rpmE S3733 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS3630915 213 - 0.488263
rpmF S1173 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1137976 174 + 0.54023
rpmG S4093 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS3993526 168 + 0.39881
rpmH S4010 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS3906172 141 + 0.51773
rpmI S1632 50S ribosomal subunit protein ARecName: Full=50S ribosomal protein L35; chromosome CDS1585385 198 + 0.494949
rpmJ S4431 50S ribosomal subunit protein L36RecName: Full=50S ribosomal protein L36; AltName: Full=Ribosomal protein B; chromosome CDS4345587 117 + 0.478632
rpsA S0971 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS949755 1674 + 0.510753
rpsB S0162 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS180305 726 + 0.511019
rpsC S4416 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS4338438 702 + 0.507123
rpsD S4434 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS4346658 609 + 0.509031
rpsE S4427 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS4343092 504 + 0.498016
rpsF S4625 30S ribosomal subunit protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS4521555 396 + 0.527778
rpsG S4403 30S ribosomal subunit protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS4329345 471 + 0.496815
rpsH S4424 30S ribosomal subunit protein S8, and regulatorRecName: Full=30S ribosomal protein S8; chromosome CDS4341776 393 + 0.501272
rpsI S3485 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS3355770 393 - 0.524173
rpsJ S4409 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS4335051 312 + 0.554487
rpsK S4433 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS4346223 390 + 0.515385
rpsL S4402 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS4328874 375 + 0.533333
rpsM S4432 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS4345850 357 + 0.518207
rpsN S4423 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS4341437 306 + 0.526144
rpsO S3423 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS3294738 270 - 0.514815
rpsP S2846 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS2739222 249 - 0.514056
rpsQ S4419 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS4339753 255 + 0.47451
rpsR S4627 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS4522276 228 + 0.526316
rpsS S4414 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS4337795 279 + 0.491039
rpsT S0022 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS19769 186 - 0.456989
rpsU S3311 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS3188482 216 + 0.518519
rsuA S2399 16S pseudouridylate 516 synthaseRecName: Full=Ribosomal small subunit pseudouridine synthase A; EC=5.4.99.19; AltName: Full=16S pseudouridylate 516 synthase; AltName: Full=16S rRNA pseudouridine(516) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; chromosome CDS2282444 696 - 0.533046
selB S4140 selenocysteinyl-tRNA-specific translation factorSubName: Full=Selenocysteinyl-tRNA-specific translation factor; chromosome CDS4041059 1845 + 0.56206
serS S0893 serine tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS885647 1293 + 0.527456
sfhB S2829 ftsH mutation suppressorRecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; chromosome CDS2724332 981 + 0.529052
smpA S2854 small membrane protein ARecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; chromosome CDS2746967 153 + 0.470588
spoU S4078 putative RNA methylaseRecName: Full=tRNA (guanosine(18)-2-O)-methyltransferase; EC=2.1.1.34; AltName: Full=tRNA [Gm18] methyltransferase; chromosome CDS3979737 690 - 0.552174
srmB S2811 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2703555 1335 + 0.549064
sun S3545 hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; chromosome CDS3408207 1290 + 0.5
tgt S0351 tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=Virulence-associated protein VacC; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS354770 1128 + 0.507092
thrS S1630 threonine tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1582814 1929 + 0.498186
trmA S3697 tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS3589937 1101 + 0.510445
trmD S2844 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS2737857 768 - 0.532552
trpS S4360 tryptophan tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS4289858 1005 + 0.520398
truA S2529 pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2422393 813 - 0.555966
truB S3424 tRNA pseudouridine 5S synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS3295156 945 - 0.520635
tsf S0163 protein chain elongation factor EF-TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS181288 852 + 0.496479
tufA S4405 protein chain elongation factor EF-Tu (duplicate of tufB)RecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS4332098 1185 + 0.531646
tufB S3682 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS3576338 1185 - 0.532489
tyrS S1794 tyrosine tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS1732304 1275 - 0.517647
valS S4492 valine tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS4395931 2856 + 0.547619
yabO S0055 hypothetical proteinRecName: Full=Ribosomal large subunit pseudouridine synthase A; EC=5.4.99.28; EC=5.4.99.29; AltName: Full=23S rRNA pseudouridine(746) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; AltName: Full=tRNA pseudouridine(32) synthase; chromosome CDS57100 660 - 0.542424
yadB S0139 putative tRNA synthetaseRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome CDS150455 927 - 0.535059
yadP S0142 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS152770 540 - 0.559259
yaeJ S0184 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS205264 423 + 0.541371
ybfG S2467 putative transformylaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS2360657 1551 + 0.513217
ybjF S0855 putative enzymeRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome CDS840092 1128 + 0.546986
yceC S1170 hypothetical proteinRecName: Full=Ribosomal large subunit pseudouridine synthase C; EC=5.4.99.24; AltName: Full=23S rRNA pseudouridine(955/2504/2580) synthase; AltName: Full=rRNA pseudouridylate synthase C; AltName: Full=rRNA-uridine isomerase C; chromosome CDS1135549 960 + 0.515625
ycfB S1235 hypothetical proteinRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS1196744 1152 - 0.537326
ychF S1290 putative GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS1253317 1092 - 0.510073
yciH S1369 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1336805 330 + 0.49697
yciL S1356 hypothetical proteinRecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; chromosome CDS1321006 873 + 0.542955
yciO S1355 hypothetical proteinRecName: Full=Uncharacterized protein YciO; chromosome CDS1320249 657 + 0.496195
yeiP S2387 putative elongation factorRecName: Full=Elongation factor P-like protein; chromosome CDS2267851 828 + 0.507246
yfcB S2542 putative adenine-specific methylaseRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome CDS2435088 1266 - 0.511848
yfhC S2778 putative deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2675813 537 - 0.540037
yfiA S2835 putative yhbH sigma 54 modulatorRecName: Full=Ribosome-associated inhibitor A; chromosome CDS2730439 342 + 0.461988
yfiF S2816 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2707976 1038 - 0.565511
yfjA S2845 hypothetical proteinRecName: Full=Ribosome maturation factor RimM; chromosome CDS2738655 549 - 0.48816
ygcA S2992 putative enzymeRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS2867389 1302 - 0.515361
ygjO S3331 putative enzymeRecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; chromosome CDS3213641 1137 - 0.53562
yhaR S3365 hypothetical proteinRecName: Full=Putative reactive intermediate deaminase TdcF; EC=3.5.4.-; chromosome CDS3242345 390 - 0.525641
yhbH S3461 probable sigma-54 modulation proteinRecName: Full=Ribosome hibernation promoting factor; chromosome CDS3329459 288 + 0.444444
yhbY S3438 hypothetical proteinRecName: Full=RNA-binding protein YhbY; chromosome CDS3311090 294 + 0.486395
yhdG S3515 putative dehydrogenaseRecName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-; chromosome CDS3388057 843 + 0.520759
yibK S4123 hypothetical proteinRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS4020933 474 - 0.550633
yicN S3970 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3863814 480 - 0.51875
yihZ S3787 hypothetical proteinRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS3683122 438 - 0.552511
yjbC S3635 hypothetical proteinRecName: Full=Ribosomal large subunit pseudouridine synthase F; EC=5.4.99.-; AltName: Full=23S rRNA pseudouridine(2604) synthase; AltName: Full=rRNA pseudouridylate synthase F; AltName: Full=rRNA-uridine isomerase F; chromosome CDS3517246 873 - 0.520046
yjbN S3574 hypothetical proteinRecName: Full=tRNA-dihydrouridine synthase A; EC=1.-.-.-; chromosome CDS3443535 1020 + 0.532353
yjeA S4578 putative lysyl-tRNA synthetaseRecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; chromosome CDS4479223 978 + 0.522495
yjeJ S4566 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4469178 870 - 0.454023
yjfH S4603 hypothetical proteinRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS4506253 732 + 0.560109
yjgF S4509 hypothetical proteinRecName: Full=2-iminobutanoate/2-iminopropanoate deaminase; EC=3.5.99.10; AltName: Full=Enamine/imine deaminase; chromosome CDS4408360 426 + 0.507042
yjgH S4504 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4406103 396 + 0.474747
yjiI S4443 hypothetical proteinRecName: Full=Probable RNA 2-phosphotransferase; EC=2.7.1.-; chromosome CDS4353240 687 - 0.487627
yjjT S4674 putative enzymeRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS4565691 1032 - 0.546512
yleA S0643 hypothetical proteinRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS652997 1425 + 0.540351
yliG S0828 hypothetical proteinRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS817025 1326 - 0.527149
ymfC S1237 hypothetical proteinRecName: Full=Ribosomal large subunit pseudouridine synthase E; EC=5.4.99.20; AltName: Full=rRNA pseudouridylate synthase E; AltName: Full=rRNA-uridine isomerase E; chromosome CDS1198375 624 - 0.516026
yohI S2354 putative regulator proteinRecName: Full=tRNA-dihydrouridine synthase C; EC=1.-.-.-; chromosome CDS2231683 948 - 0.543249
yqcB S2998 hypothetical proteinRecName: Full=tRNA pseudouridine synthase C; EC=5.4.99.26; AltName: Full=tRNA pseudouridine(65) synthase; AltName: Full=tRNA pseudouridylate synthase C; AltName: Full=tRNA-uridine isomerase C; chromosome CDS2876691 783 - 0.535121
yrdC S3538 hypothetical proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS3403808 573 - 0.52356
yrfH S4344 hypothetical proteinRecName: Full=Heat shock protein 15; chromosome CDS4273740 402 - 0.532338