Gene list
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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 2
Number of genes found: 40
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Photobacterium profundum, ss9 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PBPRB1438 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 1592388 | 363 | - | 0.407714 |
NA | PBPRB0576 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 669181 | 1710 | + | 0.442105 |
NA | PBPRB0988 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 1127628 | 552 | - | 0.355072 |
NA | PBPRB0709 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 832042 | 1539 | - | 0.403509 |
NA | PBPRB0913 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 1053804 | 537 | + | 0.389199 |
NA | PBPRB1497 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 1652095 | 453 | - | 0.379691 |
NA | PBPRB0710 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 833577 | 999 | - | 0.428428 |
NA | PBPRB1893 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 2078134 | 663 | + | 0.45098 |
NA | PBPRB1539 | Hypothetical selenocysteine-specific translation elongation factor | SubName: Full=Hypothetical selenocysteine-specific translation elongation factor; | chromosome 2 | CDS | 1688615 | 1725 | - | 0.44058 |
NA | PBPRB1226 | hypothetical cysteinyl-tRNA synthetase (cysS) | RecName: Full=Putative cysteine--tRNA ligase 2; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase 2; Short=CysRS 2; | chromosome 2 | CDS | 1375704 | 1374 | + | 0.435953 |
AGR_C_50 | PBPRB1066 | hypothetical acetyltransferase | SubName: Full=Hypothetical acetyltransferase; | chromosome 2 | CDS | 1209979 | 528 | - | 0.401515 |
CV1182 | PBPRB1772 | hypothetical endoribonuclease L-PSP | SubName: Full=Hypothetical endoribonuclease L-PSP; | chromosome 2 | CDS | 1937662 | 1236 | - | 0.385113 |
CV2853 | PBPRB0212 | putative ATP-dependent RNA helicase DbpA | SubName: Full=Putative ATP-dependent RNA helicase DbpA; | chromosome 2 | CDS | 237697 | 1389 | + | 0.429086 |
ECS1855 | PBPRB0933 | putative Sui1 family protein | SubName: Full=Putative Sui1 family protein; | chromosome 2 | CDS | 1073803 | 339 | + | 0.430678 |
ISPLU9A | PBPRB0815 | hypothetical Tn5 trasposase | SubName: Full=Hypothetical Tn5 trasposase; | chromosome 2 | CDS | 946823 | 1272 | + | 0.408019 |
ISPLU9A | PBPRB1780 | hypothetical transposase | SubName: Full=Hypothetical transposase; | chromosome 2 | CDS | 1945696 | 1386 | - | 0.410534 |
ISPLU9A | PBPRB1485 | hypothetical Tn5 trasposase | SubName: Full=Hypothetical Tn5 trasposase; | chromosome 2 | CDS | 1641107 | 1119 | - | 0.413762 |
ISPLU9A | PBPRB0297 | putative transposase | SubName: Full=Putative transposase; | chromosome 2 | CDS | 336676 | 1389 | - | 0.409647 |
ISPLU9A | PBPRB0910 | hypothetical transposase | SubName: Full=Hypothetical transposase; | chromosome 2 | CDS | 1050745 | 1386 | + | 0.409091 |
ISPLU9A | PBPRB1162 | hypothetical transposase | SubName: Full=Hypothetical transposase; | chromosome 2 | CDS | 1310684 | 1386 | - | 0.409812 |
NE1563 | PBPRB1201 | putative relE protein | SubName: Full=Putative relE protein; | chromosome 2 | CDS | 1350166 | 291 | + | 0.402062 |
OB0457 | PBPRB1654 | Hypothetical ribosomal protein N-acetyltransferase | SubName: Full=Hypothetical ribosomal protein N-acetyltransferase; | chromosome 2 | CDS | 1801780 | 531 | - | 0.344633 |
PLU4523 | PBPRB0427 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome 2 | CDS | 498315 | 1872 | + | 0.457799 |
R00736 | PBPRB1933 | putative translation initiation inhibitor, yjgF family | SubName: Full=Putative translation initiation inhibitor, yjgF family; | chromosome 2 | CDS | 2125900 | 348 | - | 0.405172 |
RHLE | PBPRB1232 | putative ATP-dependent RNA helicase RhlE | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome 2 | CDS | 1381325 | 1416 | - | 0.449859 |
RSC0201 | PBPRB1407 | putative nuclease | SubName: Full=Putative nuclease; | chromosome 2 | CDS | 1563235 | 1398 | - | 0.405579 |
RSUA | PBPRB1023 | hypothetical ribosomal small subunit pseudouridine synthase A | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome 2 | CDS | 1166280 | 687 | - | 0.393013 |
S0788 | PBPRB1008 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome 2 | CDS | 1147474 | 1296 | + | 0.422839 |
SF0747 | PBPRB0199 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome 2 | CDS | 218106 | 1368 | - | 0.421053 |
SO3403 | PBPRB1909 | hypothetical ribosomal subunit interface protein | SubName: Full=Hypothetical ribosomal subunit interface protein; | chromosome 2 | CDS | 2103416 | 357 | + | 0.369748 |
SO3783 | PBPRB1761 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome 2 | CDS | 1928264 | 1158 | - | 0.430915 |
SRMB | PBPRB0982 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome 2 | CDS | 1120665 | 1425 | - | 0.427368 |
STM4458 | PBPRB0241 | probable translation initiation inhibitor | SubName: Full=Probable translation initiation inhibitor; | chromosome 2 | CDS | 274405 | 378 | + | 0.399471 |
TRPS | PBPRB0397 | putative tryptophanyl-tRNA synthetase | SubName: Full=Putative tryptophanyl-tRNA synthetase; | chromosome 2 | CDS | 453595 | 1020 | + | 0.410784 |
VPA0323 | PBPRB1237 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 1387651 | 372 | - | 0.483871 |
VV12506 | PBPRB0530 | hypothetical acetyltransferase | SubName: Full=Hypothetical acetyltransferase; | chromosome 2 | CDS | 616340 | 540 | - | 0.448148 |
VVA0031 | PBPRB1479 | putative Glutathione synthase; Ribosomal protein S6 modification enzyme | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome 2 | CDS | 1635627 | 1041 | - | 0.422671 |
Y2787 | PBPRB1174 | putative periplasmic L-asparaginase II | SubName: Full=Putative periplasmic L-asparaginase II; | chromosome 2 | CDS | 1325579 | 1065 | - | 0.414084 |
YAEJ | PBPRB0779 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 911170 | 414 | + | 0.410628 |
YDAF | PBPRB0703 | hypothetical acetyltransferase | SubName: Full=Hypothetical acetyltransferase; | chromosome 2 | CDS | 823180 | 531 | + | 0.38983 |