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2024-06-29 05:37:13

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 2

Number of genes found: 40

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRB1438 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1592388 363 - 0.407714
NA PBPRB0988 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1127628 552 - 0.355072
NA PBPRB1539 Hypothetical selenocysteine-specific translation elongation factorSubName: Full=Hypothetical selenocysteine-specific translation elongation factor; chromosome 2 CDS1688615 1725 - 0.44058
NA PBPRB1226 hypothetical cysteinyl-tRNA synthetase (cysS)RecName: Full=Putative cysteine--tRNA ligase 2; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase 2; Short=CysRS 2; chromosome 2 CDS1375704 1374 + 0.435953
NA PBPRB0913 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1053804 537 + 0.389199
NA PBPRB1893 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS2078134 663 + 0.45098
NA PBPRB0710 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS833577 999 - 0.428428
NA PBPRB0576 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS669181 1710 + 0.442105
NA PBPRB1497 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1652095 453 - 0.379691
NA PBPRB0709 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS832042 1539 - 0.403509
AGR_C_50 PBPRB1066 hypothetical acetyltransferaseSubName: Full=Hypothetical acetyltransferase; chromosome 2 CDS1209979 528 - 0.401515
CV1182 PBPRB1772 hypothetical endoribonuclease L-PSPSubName: Full=Hypothetical endoribonuclease L-PSP; chromosome 2 CDS1937662 1236 - 0.385113
CV2853 PBPRB0212 putative ATP-dependent RNA helicase DbpASubName: Full=Putative ATP-dependent RNA helicase DbpA; chromosome 2 CDS237697 1389 + 0.429086
ECS1855 PBPRB0933 putative Sui1 family proteinSubName: Full=Putative Sui1 family protein; chromosome 2 CDS1073803 339 + 0.430678
ISPLU9A PBPRB1780 hypothetical transposaseSubName: Full=Hypothetical transposase; chromosome 2 CDS1945696 1386 - 0.410534
ISPLU9A PBPRB1162 hypothetical transposaseSubName: Full=Hypothetical transposase; chromosome 2 CDS1310684 1386 - 0.409812
ISPLU9A PBPRB1485 hypothetical Tn5 trasposaseSubName: Full=Hypothetical Tn5 trasposase; chromosome 2 CDS1641107 1119 - 0.413762
ISPLU9A PBPRB0297 putative transposaseSubName: Full=Putative transposase; chromosome 2 CDS336676 1389 - 0.409647
ISPLU9A PBPRB0910 hypothetical transposaseSubName: Full=Hypothetical transposase; chromosome 2 CDS1050745 1386 + 0.409091
ISPLU9A PBPRB0815 hypothetical Tn5 trasposaseSubName: Full=Hypothetical Tn5 trasposase; chromosome 2 CDS946823 1272 + 0.408019
NE1563 PBPRB1201 putative relE proteinSubName: Full=Putative relE protein; chromosome 2 CDS1350166 291 + 0.402062
OB0457 PBPRB1654 Hypothetical ribosomal protein N-acetyltransferaseSubName: Full=Hypothetical ribosomal protein N-acetyltransferase; chromosome 2 CDS1801780 531 - 0.344633
PLU4523 PBPRB0427 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome 2 CDS498315 1872 + 0.457799
R00736 PBPRB1933 putative translation initiation inhibitor, yjgF familySubName: Full=Putative translation initiation inhibitor, yjgF family; chromosome 2 CDS2125900 348 - 0.405172
RHLE PBPRB1232 putative ATP-dependent RNA helicase RhlERecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome 2 CDS1381325 1416 - 0.449859
RSC0201 PBPRB1407 putative nucleaseSubName: Full=Putative nuclease; chromosome 2 CDS1563235 1398 - 0.405579
RSUA PBPRB1023 hypothetical ribosomal small subunit pseudouridine synthase ARecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome 2 CDS1166280 687 - 0.393013
S0788 PBPRB1008 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome 2 CDS1147474 1296 + 0.422839
SF0747 PBPRB0199 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome 2 CDS218106 1368 - 0.421053
SO3403 PBPRB1909 hypothetical ribosomal subunit interface proteinSubName: Full=Hypothetical ribosomal subunit interface protein; chromosome 2 CDS2103416 357 + 0.369748
SO3783 PBPRB1761 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome 2 CDS1928264 1158 - 0.430915
SRMB PBPRB0982 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome 2 CDS1120665 1425 - 0.427368
STM4458 PBPRB0241 probable translation initiation inhibitorSubName: Full=Probable translation initiation inhibitor; chromosome 2 CDS274405 378 + 0.399471
TRPS PBPRB0397 putative tryptophanyl-tRNA synthetaseSubName: Full=Putative tryptophanyl-tRNA synthetase; chromosome 2 CDS453595 1020 + 0.410784
VPA0323 PBPRB1237 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1387651 372 - 0.483871
VV12506 PBPRB0530 hypothetical acetyltransferaseSubName: Full=Hypothetical acetyltransferase; chromosome 2 CDS616340 540 - 0.448148
VVA0031 PBPRB1479 putative Glutathione synthase; Ribosomal protein S6 modification enzymeRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome 2 CDS1635627 1041 - 0.422671
Y2787 PBPRB1174 putative periplasmic L-asparaginase IISubName: Full=Putative periplasmic L-asparaginase II; chromosome 2 CDS1325579 1065 - 0.414084
YAEJ PBPRB0779 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS911170 414 + 0.410628
YDAF PBPRB0703 hypothetical acetyltransferaseSubName: Full=Hypothetical acetyltransferase; chromosome 2 CDS823180 531 + 0.38983