TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-06-16 09:19:13

Gene list

Applied filters:

COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 111

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Tropheryma whipplei TW08/27, TW08/27
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TW661 conserved ATP/GTP binding proteinSubName: Full=Conserved ATP/GTP binding protein; chromosome CDS752772 1035 - 0.461836
NA TW287 class I tRNA synthetase (I, L, M and V)RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS324081 3171 + 0.461684
NA TW335 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS367483 678 + 0.492625
NA TW286 class I tRNA synthetase (I, L, M and V)RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS321314 2571 - 0.452353
NA TW251 putative pseudouridine synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS278405 912 + 0.471491
NA TW424 putative rRNA methyltransferaseSubName: Full=Putative rRNA methyltransferase; chromosome CDS462460 792 + 0.44697
NA TW763 conserved hypothetical protein (putative deaminase)RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS860629 513 + 0.448343
NA TW721 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS814114 459 - 0.479303
NA TW334 putative peptide chain release factor methyltransferaseSubName: Full=Putative peptide chain release factor methyltransferase; EC=2.1.1.-; chromosome CDS366577 858 + 0.473193
NA TW376 putative ribonucleaseSubName: Full=Putative ribonuclease; chromosome CDS407992 1083 - 0.397045
NA TW627 conserved hypothetical proteinRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS713825 1413 - 0.482661
NA TW810 putative RNA nucleotidyltransferaseSubName: Full=Putative RNA nucleotidyltransferase; chromosome CDS918020 1437 + 0.503132
NA TW454 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS491355 969 - 0.413829
alaS TW393 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS427986 2643 + 0.458948
argS TW419 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS456981 1653 + 0.420448
aspS TW766 aspartyl-tRNA synthetaseSubName: Full=Aspartyl-tRNA synthetase; EC=6.1.1.12; chromosome CDS862885 1299 - 0.461124
cysS1 TW423 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase 1; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase 1; Short=CysRS 1; chromosome CDS461063 1401 + 0.438258
cysS2 TW456 cysteinyl-tRNA synthetaseRecName: Full=Putative cysteine--tRNA ligase 2; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase 2; Short=CysRS 2; chromosome CDS493213 1353 - 0.443459
def TW462 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS499172 606 + 0.465347
efp TW401 elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS436842 558 + 0.448029
fmt TW411 methionyl-tRNA formyltransferaseSubName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS449695 960 + 0.433333
frr TW321 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS353710 546 + 0.46337
fusA TW694 elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS787370 2106 - 0.470085
gatA TW356 glutamyl-tRNA (gln) amidotransferase subunit ARecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome CDS389299 1482 + 0.468286
gatB TW357 glutamyl-tRNA (gln) amidotransferase subunit BRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS390777 1515 + 0.466007
gatC TW355 glutamyl-tRNA(gln) amidotransferase subunit CSubName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit C; EC=6.3.5.-; chromosome CDS389007 303 + 0.491749
gltX TW563 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS600620 1443 - 0.446292
glyQS TW262 glycyl-tRNA synthetaseSubName: Full=Glycyl-tRNA synthetase; EC=6.1.1.14; chromosome CDS293012 3075 - 0.44
hisS TW794 histidyl-tRNA synthetaseRecName: Full=Probable histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS900245 1281 - 0.453552
infA TW228 translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS255844 222 + 0.504505
infB TW614 translation initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS698201 2412 - 0.504975
infC TW608 translation initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS689959 549 - 0.500911
ksgA TW569 dimethyladenosine transferaseSubName: Full=Dimethyladenosine transferase; EC=2.1.1.-; chromosome CDS616652 1257 - 0.480509
leuS TW385 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS418111 2421 + 0.439488
lysS TW072 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; chromosome CDS62943 1638 - 0.454823
map TW511 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS549738 870 + 0.449425
metG TW775 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; chromosome CDS872789 1752 + 0.455479
miaA TW626 tRNA delta (2)-isopentenylpyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS712844 861 - 0.456446
pheS TW605 phenylalanyl-tRNA synthetase alpha chainRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS687857 1011 - 0.468843
pnp TW347 mRNA processing exonucleaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS377107 2208 + 0.495471
prfA TW333 peptide chain release factor 1SubName: Full=Peptide chain release factor 1; chromosome CDS365530 1044 + 0.466475
prfB TW574 peptide chain release factor 2SubName: Full=Peptide chain release factor 2; chromosome CDS627148 1131 - 0.468612
proS TW588 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS660811 1806 + 0.459579
pth TW673 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS764591 561 - 0.465241
rbfA TW613 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS697504 591 - 0.485618
rimM TW306 probable 16s rRNA processing protein RimMRecName: Full=Ribosome maturation factor RimM; chromosome CDS342303 549 + 0.489982
rne TW291 ribonuclease ESubName: Full=Ribonuclease E; EC=3.1.4.-; chromosome CDS329749 1650 + 0.481212
rnpA TW817 ribonuclease P protein componentSubName: Full=Ribonuclease P protein component; EC=3.1.26.5; chromosome CDS925397 339 - 0.383481
rph TW640 ribonuclease PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome CDS727191 771 - 0.46952
rplA TW730 50S ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS825023 684 - 0.494152
rplB TW210 50s ribosomal protein l2RecName: Full=50S ribosomal protein L2; chromosome CDS245758 834 + 0.528777
rplC TW207 50S ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS244074 633 + 0.522907
rplD TW208 50s ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS244696 747 + 0.52075
rplE TW219 50S ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS249622 552 + 0.472826
rplF TW221 50S ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS250595 546 + 0.472527
rplI TW114 50s ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS124733 462 - 0.482684
rplJ TW729 50s ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS824388 501 - 0.499002
rplK TW731 50S ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS825703 426 - 0.474178
rplL TW728 50s ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS823996 381 - 0.496063
rplM TW153 50S ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS178288 426 + 0.504695
rplN TW217 50s ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS248910 372 + 0.505376
rplO TW224 50s ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS252558 444 + 0.506757
rplP TW214 50s ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS247898 432 + 0.49537
rplQ TW233 50S ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS258010 540 + 0.555556
rplR TW222 50S ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS251137 360 + 0.505556
rplS TW308 50s ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS343681 348 + 0.471264
rplT TW606 50s ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS689251 411 - 0.515815
rplU TW292 50s ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS331522 315 + 0.495238
rplV TW212 50s ribosomal protein l22RecName: Full=50S ribosomal protein L22; chromosome CDS246877 360 + 0.488889
rplW TW209 50s ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS245439 312 + 0.432692
rplX TW218 50S ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS249284 342 + 0.467836
rplY TW677 50s ribosomal protein L25RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS766845 564 - 0.52305
rpmA TW293 50s ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS331877 249 + 0.566265
rpmB TW125 50s ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS131520 237 + 0.540084
rpmC TW215 50s ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS248316 240 + 0.5
rpmE TW458 50s ribosomal protein L31RecName: Full=50S ribosomal protein L31 type B; chromosome CDS495667 252 - 0.428571
rpmF TW198 50s ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS236982 198 + 0.570707
rpmG TW126 50s ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS131756 171 + 0.473684
rpmI TW607 50s ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS689691 198 - 0.535354
rpmJ TW229 50S ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS256068 120 + 0.491667
rpsA TW479 30s ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS515795 1422 - 0.452883
rpsB TW318 30s ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS351125 864 + 0.489583
rpsC TW213 30s ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS247239 663 + 0.505279
rpsD TW392 30s ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS427160 618 + 0.555016
rpsE TW223 30s ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS251493 861 + 0.526132
rpsF TW117 30s ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS126021 303 - 0.50165
rpsG TW695 30S ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS789511 471 - 0.5138
rpsH TW220 30S ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS250203 399 + 0.483709
rpsI TW154 30s ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS178713 465 + 0.56129
rpsJ TW206 30S ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS243756 309 + 0.466019
rpsK TW231 30S ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS256600 393 + 0.513995
rpsL TW696 30S ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS789981 375 - 0.546667
rpsM TW230 30S ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS256222 375 + 0.52
rpsN TW127 30s ribosomal protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS131927 306 + 0.558824
rpsO TW346 30s ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS376790 273 + 0.527473
rpsP TW304 30s ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS341630 447 + 0.552573
rpsQ TW216 30S ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS248552 261 + 0.482759
rpsR TW115 30s ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS125191 252 - 0.488095
rpsS TW211 30s ribosomal protein s19RecName: Full=30S ribosomal protein S19; chromosome CDS246596 282 + 0.489362
rpsT TW495 30s ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS533550 288 + 0.503472
serS TW740 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS835755 1254 + 0.46571
tgt TW620 queuine tRNA-ribosyltransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS704564 1215 + 0.460082
thrS TW508 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS545454 1923 - 0.459178
trmD TW307 tRNA (guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS342884 705 + 0.425532
trmU TW353 probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS385916 1080 + 0.490741
trpS TW705 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS799092 1008 + 0.453373
truA TW234 tRNA pseudouridine synthase ARecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS258575 804 + 0.46393
truB TW097 tRNA pseudouridine synthase BRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS96582 1152 - 0.444444
tsf TW319 elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS352019 822 + 0.504866
tufA TW131 elongation factor TU-1RecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS136972 1194 + 0.505025
tyrS TW603 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS683275 1416 - 0.47952