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2024-06-12 11:39:46

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome II

Number of genes found: 28

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Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VVA0001 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS192 1971 + 0.474378
VVA0031 putative glutathione synthaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome II CDS29588 1041 - 0.479347
VVA0081 2-methylthioadenine synthetaseRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome II CDS92110 1410 + 0.510638
VVA0154 pseudouridylate synthase, 23S RNA-specificRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome II CDS177014 1698 - 0.538869
VVA0169 rRNA methylaseSubName: Full=rRNA methylase; chromosome II CDS198936 735 + 0.497959
VVA0229 SAM-dependent methyltransferaseRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome II CDS262687 1194 + 0.507538
VVA0360 DNA and RNA helicaseSubName: Full=DNA and RNA helicase; chromosome II CDS419351 1344 + 0.469494
VVA0450 acetyltransferaseSubName: Full=Acetyltransferase; chromosome II CDS515201 558 - 0.455197
VVA0646 DNA and RNA helicaseSubName: Full=DNA and RNA helicase; chromosome II CDS720329 1380 - 0.476812
VVA0657 DNA and RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome II CDS740601 1926 + 0.490654
VVA0731 DNA and RNA helicaseSubName: Full=DNA and RNA helicase; chromosome II CDS832042 1257 + 0.472554
VVA0768 acetyltransferaseSubName: Full=Acetyltransferase; chromosome II CDS863905 540 - 0.444444
VVA0787 sui1 family proteinSubName: Full=Sui1 family protein; chromosome II CDS889161 312 + 0.435897
VVA0939 DNA and RNA helicaseSubName: Full=DNA and RNA helicase; chromosome II CDS1033259 1338 - 0.480568
VVA1033 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS1159065 360 - 0.402778
VVA1139 putative translation initiation inhibitorSubName: Full=Putative translation initiation inhibitor; chromosome II CDS1265765 363 - 0.482094
VVA1141 N-acetyl-beta-hexosaminidaseSubName: Full=N-acetyl-beta-hexosaminidase; chromosome II CDS1267273 2472 - 0.501214
VVA1144 putative translation initiation inhibitorSubName: Full=Putative translation initiation inhibitor; chromosome II CDS1271531 393 - 0.501272
VVA1159 DNA and RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome II CDS1284553 1530 + 0.511111
VVA1165 acetyltransferaseSubName: Full=Acetyltransferase; chromosome II CDS1287741 555 + 0.472072
VVA1176 predicted rRNA methylaseSubName: Full=Predicted rRNA methylase; chromosome II CDS1300252 522 + 0.503831
VVA1311 ribosomal protein S6 modification proteinRecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; chromosome II CDS1452936 906 + 0.466887
VVA1334 N-formylmethionyl-tRNA deformylaseRecName: Full=Peptide deformylase 1; Short=PDF 1; EC=3.5.1.88; AltName: Full=Polypeptide deformylase 1; chromosome II CDS1479262 507 - 0.473373
VVA1349 Tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase 1; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase 1; Short=TyrRS 1; chromosome II CDS1496919 1269 + 0.49409
VVA1432 putative translation elongation factor GSubName: Full=Putative translation elongation factor G; chromosome II CDS1586217 2019 + 0.492323
VVA1457 DNA and RNA helicaseSubName: Full=DNA and RNA helicase; chromosome II CDS1604317 1209 + 0.46402
VVA1587 DNA and RNA helicaseSubName: Full=DNA and RNA helicase; chromosome II CDS1729873 1311 - 0.50267
VVA1664 tRNA and rRNA cytosine-C5-methylaseSubName: Full=tRNA and rRNA cytosine-C5-methylase; chromosome II CDS1817561 1248 - 0.517628