Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 155
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Nitrosomonas europaea ATCC 19718, ATCC 19718 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | NE1851 | YER057c/YjgF/UK114 family | SubName: Full=YER057c/YjgF/UK114 family; | chromosome | CDS | 1999916 | 390 | - | 0.55641 |
| NA | NE0420 | Ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 462027 | 462 | + | 0.398268 |
| NA | NE0414 | Ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 459583 | 306 | + | 0.415033 |
| NA | NE0775 | tRNA/rRNA methyltransferase (SpoU) | SubName: Full=tRNA/rRNA methyltransferase (SpoU); EC=2.1.1.-; | chromosome | CDS | 840997 | 834 | + | 0.492806 |
| NA | NE2171 | Formyl transferase N-terminus | SubName: Full=Formyl transferase N-terminus; EC=2.-.-.-; | chromosome | CDS | 2359934 | 786 | - | 0.424936 |
| NA | NE0413 | Ribosomal protein L5:Mitochondrial ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 459033 | 540 | + | 0.372222 |
| NA | NE0427 | Ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 466675 | 393 | + | 0.414758 |
| NA | NE0691 | tRNA pseudouridine synthase | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 751240 | 819 | + | 0.487179 |
| NA | NE0493 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 533980 | 318 | - | 0.509434 |
| NA | NE0763 | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 828817 | 927 | + | 0.474649 |
| NA | NE0946 | SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family | SubName: Full=SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family; | chromosome | CDS | 1031893 | 1020 | + | 0.444118 |
| NA | NE1563 | Protein of unknown function DUF79 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1695378 | 291 | + | 0.32646 |
| NA | NE1972 | sun; rRNA methylase | SubName: Full=Sun rRNA methylase; | chromosome | CDS | 2129034 | 1281 | + | 0.534738 |
| NA | NE2252 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 2442464 | 1782 | + | 0.517957 |
| NA | NE2498 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2729205 | 807 | - | 0.491945 |
| NA | NE0061 | Sigma 54 modulation protein / S30EA ribosomal protein | SubName: Full=Sigma 54 modulation protein / S30EA ribosomal protein; | chromosome | CDS | 81151 | 336 | - | 0.386905 |
| NA | NE0874 | Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 953350 | 1014 | + | 0.524655 |
| NA | NE0526 | Uncharacterized protein family UPF0044 | SubName: Full=Uncharacterized protein family UPF0044; | chromosome | CDS | 562796 | 381 | - | 0.493438 |
| NA | NE2291 | cAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily | SubName: Full=cAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily; | chromosome | CDS | 2485723 | 765 | - | 0.500654 |
| NA | NE0437 | Cytidine and deoxycytidylate deaminase zinc-binding region | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 474482 | 504 | + | 0.553571 |
| NA | NE2335 | Fe-S oxidoreductases family 1 | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 2534571 | 1332 | - | 0.453453 |
| NA | NE1431 | t-RNA synthetase, class Ib | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 1559381 | 1230 | + | 0.502439 |
| NA | NE1912 | hemK_fam: modification methylase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 2064788 | 870 | - | 0.513793 |
| NA | NE1725 | SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family | SubName: Full=SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family; | chromosome | CDS | 1861300 | 633 | + | 0.532385 |
| NA | NE0476 | Protein of unknown function DUF79 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 516603 | 255 | + | 0.466667 |
| NA | NE0411 | Ribosomal protein L14b/L23e family | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 458315 | 369 | + | 0.425474 |
| NA | NE0190 | ADP-glucose pyrophosphorylase | SubName: Full=ADP-glucose pyrophosphorylase; EC=2.7.7.-; | chromosome | CDS | 228266 | 720 | - | 0.548611 |
| NA | NE0005 | possible 16S pseudouridylate synthase | SubName: Full=Possible 16S pseudouridylate synthase; | chromosome | CDS | 5907 | 732 | + | 0.502732 |
| NA | NE0351 | putative tRNA/rRNA methyltransferase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 394569 | 783 | + | 0.528736 |
| NA | NE1953 | rRNA_methyl_1: RNA methyltransferase, TrmHfamily, group 1 | SubName: Full=rRNA_methyl_1: RNA methyltransferase, TrmHfamily, group 1; | chromosome | CDS | 2110218 | 741 | - | 0.553306 |
| NA | NE0025 | Metallo-beta-lactamase superfamily | SubName: Full=Metallo-beta-lactamase superfamily; | chromosome | CDS | 31721 | 1407 | - | 0.517413 |
| NA | NE0761 | putative translation initiation factor protein | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 825643 | 2670 | + | 0.510487 |
| NA | NE2270 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2460540 | 1035 | - | 0.437681 |
| NA | NE1807 | putative ATP-dependent RNA helicase protein | SubName: Full=Putative ATP-dependent RNA helicase protein; | chromosome | CDS | 1954496 | 1374 | + | 0.53639 |
| NA | NE0436 | adenine specific methylase, HemK family | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 473497 | 939 | - | 0.533546 |
| NA | NE1755 | Formylmethionine deformylase | RecName: Full=Peptide deformylase 1; Short=PDF 1; EC=3.5.1.88; AltName: Full=Polypeptide deformylase 1; | chromosome | CDS | 1893425 | 531 | + | 0.549906 |
| NA | NE2565 | S4 domain | SubName: Full=S4 domain; | chromosome | CDS | 2804085 | 411 | - | 0.557178 |
| NA | NE0047 | Cytidine and deoxycytidylate deaminase zinc-binding region | SubName: Full=Cytidine and deoxycytidylate deaminase zinc-binding region; | chromosome | CDS | 59059 | 582 | + | 0.601375 |
| NA | NE0085 | SAM (and some other nucleotide) binding motif:NOL1/NOP2/sun f... | SubName: Full=SAM (And some other nucleotide) binding motif:NOL1/NOP2/sun f; | chromosome | CDS | 103819 | 1260 | - | 0.511905 |
| NA | NE1457 | Ribonucleases G and E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 1590529 | 2562 | + | 0.52381 |
| NA | NE1584 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1714296 | 297 | + | 0.400673 |
| NA | NE0435 | possible pseudouridylate synthase family 1 | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 472644 | 879 | + | 0.541524 |
| NA | NE0681 | putative transmembrane protein | SubName: Full=Putative transmembrane protein; | chromosome | CDS | 740422 | 570 | - | 0.519298 |
| NA | NE0410 | Ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 457979 | 255 | + | 0.380392 |
| NA | NE1672 | RimM | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 1807789 | 510 | + | 0.511765 |
| NA | NE0807 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 876438 | 456 | - | 0.497807 |
| NA | NE0404 | Ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 455123 | 837 | + | 0.431302 |
| NA | NE2302 | rRNA_methyl_2: RNA methyltransferase, TrmH family, group 2 | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 2495699 | 465 | + | 0.569892 |
| NA | NE0527 | FtsJ cell division protein | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 563220 | 621 | + | 0.494364 |
| NA | NE1823 | GTP1/OBG family:Conserved hypothetical protein 92 | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 1970502 | 1092 | - | 0.526557 |
| alaS | NE1930 | Alanyl-tRNA synthetase:DHHA1 domain | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 2084262 | 2592 | - | 0.51929 |
| argS | NE0364 | Arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 407590 | 1761 | + | 0.511641 |
| cafA | NE0355 | S1 RNA binding domain:Ribonuclease E and G | SubName: Full=S1 RNA binding domain:Ribonuclease E and G; EC=3.1.4.-; | chromosome | CDS | 397628 | 1446 | - | 0.52213 |
| cca | NE1614 | Poly A polymerase family:HD domain | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 1740272 | 1239 | - | 0.564972 |
| cysS | NE0043 | Cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 54841 | 1398 | + | 0.501431 |
| def | NE1970 | Formylmethionine deformylase | RecName: Full=Peptide deformylase 2; Short=PDF 2; EC=3.5.1.88; AltName: Full=Polypeptide deformylase 2; | chromosome | CDS | 2127444 | 558 | + | 0.517921 |
| efp | NE0897 | Elongation factor P (EF-P) | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 976038 | 558 | - | 0.442652 |
| fmt | NE1971 | Formyl transferase N-terminus:Methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 2128063 | 975 | + | 0.548718 |
| fusA1 | NE2053 | Translation elongation and release factors (GTPases) | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 2229358 | 2091 | - | 0.450502 |
| gatA | NE2072 | Amidase:Glutamyl-tRNA(Gln) amidotransferase A subunit | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 2250380 | 1461 | + | 0.512663 |
| gatB | NE2073 | gatB: glutamyl-tRNA(Gln) amidotransferase, B subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 2251896 | 1437 | + | 0.507307 |
| gatC | NE2071 | Glu-tRNAGln amidotransferase C subunit | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 2250030 | 288 | + | 0.451389 |
| glnS | NE2363 | Glutamyl-tRNA synthetase:Glutaminyl-tRNA synthetase GlnS | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 2567612 | 1671 | + | 0.505685 |
| glnS | NE2356 | Glutamyl-tRNA synthetase:Glutaminyl-tRNA synthetase GlnS | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 2560102 | 1671 | + | 0.505685 |
| gltX | NE1624 | gltX; glutamate-tRNA synthetase (catalytic subunit)(sye protein) | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 1754414 | 1392 | - | 0.533046 |
| glyQ | NE1187 | Glycyl-tRNA synthetase, alpha subunit | SubName: Full=Glycyl-tRNA synthetase, alpha subunit; EC=6.1.1.14; | chromosome | CDS | 1286268 | 978 | - | 0.552147 |
| glyS | NE1186 | Glycyl-tRNA synthetase, beta subunit | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 1284124 | 2148 | - | 0.549348 |
| gshB | NE1295 | gshB; glutathione synthetase protein | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; | chromosome | CDS | 1414596 | 963 | + | 0.548287 |
| hisS | NE0150 | hisS; histidine-tRNA synthetase protein | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 174183 | 1233 | + | 0.530414 |
| ileS | NE1149 | t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 1245592 | 2820 | - | 0.531915 |
| infA | NE0422 | S1 RNA binding domain:Translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 463811 | 219 | + | 0.378995 |
| infC | NE0957 | Initiation factor 3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 1041621 | 495 | - | 0.436364 |
| ksgA | NE0884 | ksgA; dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 966331 | 774 | + | 0.496124 |
| leuS | NE1139 | t-RNA synthetase, class Ia:Leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 1234324 | 2610 | - | 0.531801 |
| ligT | NE1401 | putative 2'-5' RNA ligase | SubName: Full=Putative 2-5 RNA ligase; EC=6.5.1.-; | chromosome | CDS | 1530806 | 576 | - | 0.555556 |
| lysS | NE2355 | lysS; putative lysyl-tRNA synthetase protein | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 2558314 | 1509 | - | 0.499669 |
| map | NE0275 | Methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 305311 | 819 | + | 0.514042 |
| miaA | NE1976 | tRNA isopentenyltransferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 2135084 | 954 | - | 0.532495 |
| omlA | NE0615 | possible outer membrane lipoprotein OmlA | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 668246 | 495 | - | 0.472727 |
| pcnB | NE0069 | Poly A polymerase family | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 88660 | 1383 | + | 0.537961 |
| pheS | NE0954 | pheS; phenylalanyl-tRNA synthetase, alpha-subunit | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 1039822 | 1038 | - | 0.447977 |
| pnp | NE0172 | pnp; polyribonucleotide nucleotidyltransferase protein | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 210838 | 2127 | - | 0.497884 |
| prfA | NE1913 | prfA: peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 2065654 | 1080 | - | 0.523148 |
| prfB | NE1229 | Peptide chain release factor 2 | RecName: Full=Peptide chain release factor 2; Short=RF-2; | chromosome | CDS | 1337349 | 1044 | - | 0.519157 |
| prfC | NE2481 | prfC; peptide chain release factor RF-3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 2707230 | 1608 | + | 0.536692 |
| prmA | NE0654 | prmA; putative ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 709274 | 942 | + | 0.53397 |
| proS | NE1317 | Prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 1436837 | 1707 | + | 0.51611 |
| pth | NE1824 | Peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 1971668 | 588 | - | 0.559524 |
| rbfA | NE0762 | Ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 828363 | 354 | + | 0.49435 |
| rhlE | NE2040 | rhlE; ATP-dependent RNA helicase RhlE | SubName: Full=RhlE ATP-dependent RNA helicase RhlE; | chromosome | CDS | 2209232 | 1497 | - | 0.504342 |
| rluC | NE1456 | rluC; ribosomal large subunit pseudouridine synthase C | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1589056 | 1032 | - | 0.484496 |
| rluD | NE0505 | rluD; ribosomal large subunit pseudouridine synthase D | RecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; | chromosome | CDS | 543547 | 1035 | - | 0.550725 |
| rnpA | NE0389 | Bacterial ribonuclease P protein | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 444329 | 360 | - | 0.491667 |
| rph | NE0276 | 3' exoribonuclease family | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 306197 | 726 | + | 0.541322 |
| rplA | NE2049 | Ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 2225768 | 705 | - | 0.432624 |
| rplC | NE0401 | Ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 453506 | 648 | + | 0.410494 |
| rplD | NE0402 | Ribosomal protein L4/L1e | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 454174 | 621 | + | 0.402576 |
| rplF | NE0416 | Ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 460368 | 543 | + | 0.370166 |
| rplI | NE0195 | Ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 233577 | 456 | - | 0.464912 |
| rplJ | NE2048 | Ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 2224948 | 516 | - | 0.45155 |
| rplK | NE2050 | Ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 2226462 | 432 | - | 0.444444 |
| rplL | NE2047 | Ribosomal protein L7/L12 C-terminal domain | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 2224503 | 375 | - | 0.448 |
| rplM | NE1484 | Ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 1619424 | 435 | - | 0.466667 |
| rplP | NE0408 | Ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 457364 | 417 | + | 0.455635 |
| rplR | NE0417 | Ribosomal protein L18P/L5E:Ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 460925 | 360 | + | 0.369444 |
| rplS | NE1674 | Ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 1809123 | 399 | + | 0.458647 |
| rplT | NE0955 | Ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 1040928 | 360 | - | 0.427778 |
| rplU | NE1293 | Ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 1412792 | 312 | - | 0.490385 |
| rplV | NE0406 | Ribosomal protein L22p / L17e | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 456258 | 333 | + | 0.435435 |
| rplW | NE0403 | Ribosomal L23 protein | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 454791 | 336 | + | 0.327381 |
| rplX | NE0412 | Ribosomal protein L24/bacterial NUSG:Ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 458701 | 318 | + | 0.330189 |
| rplY | NE1825 | Ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 1972375 | 597 | - | 0.485762 |
| rpmA | NE1292 | Ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 1412522 | 258 | - | 0.542636 |
| rpmB | NE1465 | Ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 1599634 | 237 | + | 0.518987 |
| rpmC | NE0409 | Ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 457788 | 195 | + | 0.4 |
| rpmD | NE0419 | Ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 461840 | 186 | + | 0.360215 |
| rpmE,rpL31 | NE1036 | Ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 1124143 | 225 | + | 0.44 |
| rpmF | NE1644 | probable 50S ribosomal subunit protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1776708 | 183 | + | 0.502732 |
| rpmG | NE1466 | Ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 1599908 | 156 | + | 0.378205 |
| rpmH | NE0390 | Ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 444728 | 135 | - | 0.533333 |
| rpmI | NE0956 | Ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 1041299 | 198 | - | 0.439394 |
| rps4 | NE2143 | Ribosomal protein S4:S4 domain | RecName: Full=30S ribosomal protein S4 B; | chromosome | CDS | 2329323 | 618 | + | 0.516181 |
| rpsA | NE1962 | Ribosomal protein S1:S1 RNA binding domain | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 2117293 | 1719 | - | 0.470041 |
| rpsB | NE1718 | Ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 1853198 | 756 | - | 0.497355 |
| rpsC | NE0407 | Ribosomal protein S3:Type 2 KH domain:KH domain | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 456627 | 648 | + | 0.381173 |
| rpsD | NE0425 | Ribosomal protein S4:S4 domain | RecName: Full=30S ribosomal protein S4 A; | chromosome | CDS | 465022 | 627 | + | 0.406699 |
| rpsE | NE0418 | Ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 461301 | 534 | + | 0.426966 |
| rpsF | NE0198 | Ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 234676 | 441 | - | 0.473923 |
| rpsG | NE2054 | Ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 2231521 | 471 | - | 0.44586 |
| rpsH | NE0415 | Ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 459961 | 396 | + | 0.378788 |
| rpsI | NE1483 | Ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 1619020 | 393 | - | 0.478372 |
| rpsJ | NE0400 | Ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 453150 | 309 | + | 0.378641 |
| rpsK | NE0424 | Ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 464618 | 390 | + | 0.469231 |
| rpsL | NE2055 | Ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 2232068 | 378 | - | 0.478836 |
| rpsM | NE0423 | Ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 464218 | 360 | + | 0.394444 |
| rpsO | NE0173 | Ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 213159 | 270 | - | 0.5 |
| rpsP | NE1671 | Ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 1807491 | 270 | + | 0.537037 |
| rpsR | NE0196 | Ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 234051 | 279 | - | 0.451613 |
| rpsS | NE0405 | Ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 455965 | 285 | + | 0.4 |
| rpsT | NE2340 | Ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 2540394 | 264 | - | 0.488636 |
| rpsU | NE0226 | Ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 257934 | 213 | + | 0.460094 |
| rrf | NE1715 | Ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 1850708 | 558 | - | 0.455197 |
| serS | NE0180 | tRNA synthetases, class-II (G, H, P and S):Seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 218882 | 1314 | - | 0.520548 |
| tgt | NE1141 | tgt; tRNA-guanine transglycosylase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 1238214 | 1116 | + | 0.547491 |
| thrS | NE0958 | thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) protein | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 1042241 | 1908 | - | 0.427673 |
| trmB | NE1673 | tRNA (guanine-N1-)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 1808309 | 813 | + | 0.484625 |
| trmU | NE0963 | trmU; tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 1049051 | 1089 | + | 0.471074 |
| trpS | NE1727 | t-RNA synthetase, class Ib:Tryptophanyl-tRNA synthetase | SubName: Full=T-RNA synthetase, class Ib:Tryptophanyl-tRNA synthetase; EC=6.1.1.2; | chromosome | CDS | 1862663 | 1203 | + | 0.526185 |
| tsaA | NE1140 | Queuosine biosynthesis protein | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 1237156 | 1062 | + | 0.52354 |
| tsf | NE1717 | Ubiquitin-associated domain:Elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 1852239 | 885 | - | 0.508475 |
| tuf2 | NE0399 | GTPases-translation elongation factors and sulfate adenylate transferase subunit 1 | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 451898 | 1191 | + | 0.497061 |
| tuf2 | NE2052 | GTPases-translation elongation factors and sulfate adenylate transferase subunit 1 | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 2228137 | 1191 | - | 0.498741 |
| valS | NE0444 | probable valyl-tRNA synthetase (valine--tRNA ligase) protein | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 482437 | 2757 | + | 0.528836 |
| ygcA | NE1857 | SAM (and some other nucleotide) binding motif | RecName: Full=Uncharacterized RNA methyltransferase NE1857; EC=2.1.1.-; | chromosome | CDS | 2006677 | 1182 | + | 0.529611 |
| yliG | NE0911 | Uncharacterized protein family UPF0004 | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 993053 | 1344 | + | 0.529018 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|