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2024-05-28 20:23:56

Gene list

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COG category: Lipid transport and metabolism
Genomic element: chromosome

Number of genes found: 77

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Saccharophagus degradans 2-40, 2-40
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Sde_2739 conserved hypothetical proteinSubName: Full=Cyclase/dehydrase; chromosome CDS3468320 432 - 0.493056
NA Sde_1657 PAP2 superfamily proteinSubName: Full=Phosphoesterase, PA-phosphatase related; chromosome CDS2125667 516 - 0.436047
NA Sde_2052 3-isopropylmalate dehydratase small subunit regionSubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; chromosome CDS2631832 558 - 0.460573
NA Sde_3531 conserved hypothetical proteinSubName: Full=AMP-dependent synthetase and ligase; chromosome CDS4484703 3492 + 0.480241
NA Sde_2591 1-deoxy-D-xylulose-5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS3286744 1179 - 0.497031
NA Sde_2244 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2851176 414 - 0.391304
NA Sde_0690 Dihydroneopterin aldolaseSubName: Full=Phosphatidate cytidylyltransferase; chromosome CDS893144 864 + 0.431713
NA Sde_3381 deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS4312100 1950 + 0.533846
NA Sde_0165 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS203758 240 + 0.416667
NA Sde_3744 (Acyl-carrier protein) phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome CDS4743891 630 - 0.474603
NA Sde_1769 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunitSubName: Full=Phosphoesterase, PA-phosphatase related; chromosome CDS2257587 684 - 0.431287
NA Sde_3776 histidine kinaseSubName: Full=Histidine kinase; EC=2.7.3.-; chromosome CDS4777606 1185 + 0.452321
NA Sde_2001 Palmitoyl-CoA hydrolaseSubName: Full=Palmitoyl-CoA hydrolase; EC=3.1.2.2; chromosome CDS2518404 852 + 0.480047
NA Sde_3777 response regulator receiver, CheY-likeSubName: Full=Uncharacterized protein; chromosome CDS4778801 708 + 0.385593
NA Sde_3919 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4939413 822 + 0.475669
NA Sde_3494 Acyl-CoA dehydrogenases-likeSubName: Full=Acyl-CoA dehydrogenase-like protein; chromosome CDS4449625 1221 + 0.439803
NA Sde_0166 putative carnitine operon oxidoreductaseSubName: Full=Acyl-CoA dehydrogenase protein; chromosome CDS204010 1188 + 0.5
NA Sde_1849 acyltransferases-likeSubName: Full=Acyltransferase 3; chromosome CDS2338983 1365 - 0.412454
NA Sde_2480 Acyl-CoA hydrolase-likeSubName: Full=Thioesterase superfamily; chromosome CDS3133535 558 + 0.433692
NA Sde_1628 Helix-turn-helix, AraC typeRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS2091923 945 + 0.511111
NA Sde_2563 Elongation factor TsRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS3252735 936 - 0.522436
NA Sde_0998 beta-ketoacyl-ACP synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; EC=2.3.1.41; chromosome CDS1280006 1218 - 0.510673
NA Sde_1627 fatty acid/phospholipid synthesis protein PlsXRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS2090836 1026 + 0.519493
NA Sde_1605 Fatty-acid oxidation complex alpha-subunitSubName: Full=3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase; EC=1.1.1.35; EC=4.2.1.17; chromosome CDS2061835 2166 + 0.468606
NA Sde_2984 Sterol desaturase-likeSubName: Full=C-5 sterol desaturase; EC=1.3.3.-; chromosome CDS3788979 720 - 0.416667
NA Sde_1631 Sodium:alanine symporterRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS2094334 1233 + 0.48013
NA Sde_3724 TRAP dicarboxylate transporter, DctM subunitSubName: Full=Sterol desaturase-like protein; chromosome CDS4712431 939 + 0.444089
NA Sde_0691 7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPKSubName: Full=CDP-alcohol phosphatidyltransferase; chromosome CDS893994 591 + 0.434856
NA Sde_1065 Galactose-1-phosphate uridyl transferase, class ISubName: Full=Lipase, class 3; chromosome CDS1364896 900 - 0.465556
NA Sde_1886 Pseudouridine synthase, RsuSubName: Full=AMP-dependent synthetase and ligase; chromosome CDS2381162 1602 + 0.433833
NA Sde_1326 polyhydroxyalkanoic acid synthaseSubName: Full=Poly(R)-hydroxyalkanoic acid synthase, class I; chromosome CDS1720762 1797 + 0.47468
NA Sde_3758 putative acyl-CoA thioester hydrolaseSubName: Full=Thioesterase superfamily; chromosome CDS4758262 405 + 0.493827
NA Sde_0164 ATP-grasp enzyme-likeSubName: Full=ATP-grasp enzyme-like protein; chromosome CDS202118 1251 + 0.450839
NA Sde_3452 putative phosphatidylglycerophosphatase ARecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS4394444 480 - 0.460417
NA Sde_1517 3-oxoacyl-(acyl-carrier protein) synthaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; EC=2.3.1.41; chromosome CDS1956365 999 - 0.433433
NA Sde_2538 phosphatidylserine synthaseSubName: Full=CDP-diacylglycerol--serine O-phosphatidyltransferase; EC=2.7.8.8; chromosome CDS3215588 876 - 0.460046
NA Sde_2850 putative lipase/esteraseSubName: Full=Alpha/beta hydrolase fold-3; chromosome CDS3603785 927 - 0.480043
NA Sde_1885 putative acyl-CoA dehydrogenaseSubName: Full=Acyl-CoA dehydrogenase-like protein; chromosome CDS2379224 1788 + 0.475392
NA Sde_3255 4-diphosphocytidyl-2-C-methyl-D-erythritolkinaseRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS4153773 867 + 0.499423
NA Sde_2518 Pseudouridine synthase, RluDSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS3190023 606 - 0.460396
NA Sde_3471 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4421631 1041 - 0.486071
NA Sde_0174 acyltransferase-likeSubName: Full=Acyltransferase 3; chromosome CDS215113 1077 - 0.407614
NA Sde_0812 Phospho-N-acetylmuramoyl-pentapeptidetransferaseSubName: Full=Biotin carboxyl carrier protein; chromosome CDS1058772 456 - 0.524123
NA Sde_2453 putative acyl-CoA synthaseSubName: Full=AMP-dependent synthetase and ligase; chromosome CDS3100767 1767 - 0.449349
NA Sde_2593 Di-trans-poly-cis-decaprenylcistransferaseRecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; AltName: Full=Undecaprenyl pyrophosphate synthase; chromosome CDS3288744 750 - 0.508
NA Sde_1606 Acetyl-CoA C-acyltransferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS2064003 1176 + 0.518707
NA Sde_1630 Pyridoxal phosphate-dependent deaminaseRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS2093907 237 + 0.383966
NA Sde_2445 conserved hypothetical acyl dehydrataseSubName: Full=MaoC-like dehydratase; chromosome CDS3090141 693 - 0.437229
NA Sde_2586 (3R)-hydroxymyristoyl-(acyl carrier proteinRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS3280476 438 - 0.429224
NA Sde_2077 acetyl-CoA carboxylase beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS2657416 864 - 0.462963
NA Sde_0053 Phospholipase/lecithinase/hemolysin-likeSubName: Full=Phospholipase/lecithinase/hemolysin-like protein; chromosome CDS57877 981 + 0.438328
NA Sde_0171 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS211434 240 + 0.420833
NA Sde_0149 Cellulose-binding, family IISubName: Full=Acyltransferase 3; chromosome CDS184303 1089 + 0.354454
NA Sde_1127 putative allophanate hydrolaseSubName: Full=Allophanate hydrolase subunit 2; chromosome CDS1459939 3630 + 0.484573
NA Sde_1982 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2492757 186 - 0.38172
NA Sde_1247 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; chromosome CDS1598110 696 + 0.472701
NA Sde_1067 acetyl-coenzyme A synthetaseRecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; chromosome CDS1367106 1938 + 0.512384
NA Sde_2313 Phospholipase/lecithinase/hemolysin-likeSubName: Full=Phospholipase/lecithinase/hemolysin-like protein; chromosome CDS2939320 1023 + 0.428153
NA Sde_2592 Phosphatidate cytidylyltransferaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; chromosome CDS3287927 825 - 0.535758
NA Sde_2679 Phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome CDS3398000 861 + 0.461092
NA Sde_0999 3-hydroxydecanoyl-(acyl-carrier protein) dehydrataseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome CDS1281340 525 - 0.48381
NA Sde_0811 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligaseSubName: Full=Acetyl-CoA carboxylase, biotin carboxylase; chromosome CDS1057411 1341 - 0.50261
NA Sde_3495 Acyl-CoA dehydrogenases-likeSubName: Full=Acyl-CoA dehydrogenase-like protein; chromosome CDS4450850 1098 + 0.481785
NA Sde_0006 acetoacetyl-CoA synthaseSubName: Full=Bifunctional acetoacetyl-CoA synthase/AMP-(Fatty) acid ligase; EC=6.2.1.1; EC=6.2.1.16; chromosome CDS7724 1941 + 0.462133
NA Sde_0011 Protoheme IX farnesyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS12672 723 - 0.431535
NA Sde_1248 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS1598808 468 + 0.467949
NA Sde_1107 Acetyl-CoA carboxylaseRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS1431888 957 + 0.481714
NA Sde_0626 conserved hypothetical proteinSubName: Full=3-oxoacyl-(Acyl carrier protein) synthase; chromosome CDS790686 1113 - 0.463612
NA Sde_1603 putative beta-ketoacyl synthaseSubName: Full=Beta-ketoacyl synthase; chromosome CDS2059034 1857 + 0.488961
NA Sde_3492 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS4447791 264 + 0.409091
NA Sde_3132 acyl-CoA dehydrogenase family proteinSubName: Full=Acyl-CoA dehydrogenase-like protein; chromosome CDS4005201 1770 - 0.50339
NA Sde_2457 beta-ketoacyl-acyl carrier protein synthase IISubName: Full=Beta-ketoacyl-acyl carrier protein synthase; EC=2.3.1.41; chromosome CDS3104884 1329 - 0.436418
NA Sde_2858 Phosphatidylserine synthase-likeSubName: Full=CDP-alcohol phosphatidyltransferase; chromosome CDS3616638 606 - 0.445545
NA Sde_3479 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6SubName: Full=PspA/IM30; chromosome CDS4433419 690 - 0.475362
NA Sde_3157 Esterase/lipase-likeSubName: Full=Alpha/beta hydrolase fold-3; chromosome CDS4034016 1035 - 0.471498
NA Sde_3149 Phosphoryl transfer system, HPrSubName: Full=Acetyl-CoA C-acetyltransferase; EC=2.3.1.9; chromosome CDS4024154 1179 - 0.513995
NA Sde_2378 Oxidoreductase alpha (molybdopterin) subunitSubName: Full=Enoyl-CoA hydratase; EC=4.2.1.17; chromosome CDS3015770 774 - 0.498708