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2024-06-17 05:50:45

Gene list

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COG category: Lipid transport and metabolism
Genomic element: chromosome

Number of genes found: 70

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Thiobacillus denitrificans ATCC 25259, ATCC 25259
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tbd_2596 long chain fatty acid transport proteinSubName: Full=Long chain fatty acid transport protein; Flags: Precursor; chromosome CDS2671609 1218 - 0.669951
NA Tbd_0924 3-oxoacyl-(acyl-carrier protein) reductaseSubName: Full=3-oxoacyl-(Acyl-carrier protein) reductase; chromosome CDS978929 783 - 0.671775
NA Tbd_1697 putative terpenoid synthaseSubName: Full=Putative terpenoid synthase; Flags: Precursor; chromosome CDS1788416 846 + 0.684397
NA Tbd_1860 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, LytB proteinRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS1954347 927 + 0.642934
NA Tbd_0790 phosphatidate cytidylyltransferaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; Flags: Precursor; chromosome CDS832385 807 + 0.70632
NA Tbd_1696 putative phytoene synthase-like proteinSubName: Full=Putative phytoene synthase-like protein; chromosome CDS1787568 846 + 0.647754
NA Tbd_1117 acyl carrier protein phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome CDS1173738 651 + 0.671275
NA Tbd_2776 putative transporter proteinSubName: Full=Putative transporter protein; Flags: Precursor; chromosome CDS2856286 1155 - 0.645887
NA Tbd_0446 phospholipase D/TransphosphatidylaseSubName: Full=Phospholipase D/Transphosphatidylase; chromosome CDS465871 1191 + 0.664148
NA Tbd_1547 3-oxoacyl-(acyl-carrier-protein) synthase I/IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1631554 1233 - 0.641525
NA Tbd_2243 phospholipase D/TransphosphatidylaseSubName: Full=Phospholipase D/Transphosphatidylase; Flags: Precursor; chromosome CDS2317918 1443 + 0.668053
NA Tbd_0504 acetate--CoA ligaseRecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; chromosome CDS528664 1968 + 0.667683
NA Tbd_0879 deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS928492 1857 - 0.691438
NA Tbd_1549 3-oxoacyl-(acyl-carrier-protein) reductaseSubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; chromosome CDS1633307 771 - 0.674449
NA Tbd_2194 phosphatidylglycerophosphatase ARecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS2275135 480 + 0.695833
NA Tbd_1755 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1846568 435 - 0.588506
NA Tbd_2183 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2266331 453 - 0.708609
NA Tbd_2744 acyl carrier protein, putativeSubName: Full=Acyl carrier protein, putative; chromosome CDS2824727 270 + 0.614815
NA Tbd_1987 CDP-diacylglycerol--serineO-phosphatidyltransferaseSubName: Full=CDP-diacylglycerol--serine O-phosphatidyltransferase; EC=2.7.8.8; chromosome CDS2077979 789 - 0.642586
NA Tbd_1396 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1477007 366 + 0.672131
NA Tbd_1474 phospholipase D/TransphosphatidylaseSubName: Full=Phospholipase D/Transphosphatidylase; chromosome CDS1559811 2145 - 0.686247
NA Tbd_1003 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas eRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome CDS1071480 702 + 0.67094
NA Tbd_1968 Anti-Sigm factor, ChrRSubName: Full=Anti-Sigm factor, ChrR; chromosome CDS2059837 453 - 0.690949
NA Tbd_0169 phospholipid/glycerol acyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS182911 822 - 0.70073
NA Tbd_0594 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS622478 1224 + 0.683007
NA Tbd_2180 putative Long-chain fatty acid transport proteinSubName: Full=Putative Long-chain fatty acid transport protein; Flags: Precursor; chromosome CDS2263034 1146 - 0.63438
NA Tbd_0789 di-trans-poly-cis-decaprenylcistransferaseRecName: Full=Isoprenyl transferase; EC=2.5.1.-; chromosome CDS831628 738 + 0.654472
NA Tbd_1555 acetyl-CoA carboxylase, biotin carboxylaseSubName: Full=Acetyl-CoA carboxylase, biotin carboxylase; chromosome CDS1637955 1419 + 0.630726
NA Tbd_0190 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS202715 783 + 0.591315
NA Tbd_0081 2-hydroxy-3-oxopropionate reductaseSubName: Full=2-hydroxy-3-oxopropionate reductase; EC=1.1.1.60; chromosome CDS83363 879 - 0.664391
NA Tbd_2747 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2826994 318 + 0.732704
NA Tbd_2672 putative RpfF proteinSubName: Full=Putative RpfF protein; chromosome CDS2747424 903 - 0.58804
NA Tbd_0386 4-diphosphocytidyl-2C-methyl-D-erythritol kinaseRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS414539 837 + 0.679809
NA Tbd_2345 phospholipid/glycerol acyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; Flags: Precursor; chromosome CDS2418791 723 - 0.676349
NA Tbd_2746 conserved hypothetical protein, potential CoA ligase (AMP forming)SubName: Full=Uncharacterized protein; chromosome CDS2825666 1332 + 0.738739
NA Tbd_0728 Holo-acyl carrier protein synthaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome CDS770683 396 - 0.704545
NA Tbd_1551 Beta-ketoacyl-acyl carrier protein synthase III (FabH)RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS1635189 960 - 0.659375
NA Tbd_1488 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1575949 1050 + 0.602857
NA Tbd_2597 long-chain fatty-acid-CoA ligaseSubName: Full=Long-chain fatty-acid-CoA ligase; chromosome CDS2672853 1809 - 0.693753
NA Tbd_1699 probable oxidoreductaseSubName: Full=Probable oxidoreductase; Flags: Precursor; chromosome CDS1790529 744 + 0.688172
NA Tbd_0181 acetyl-CoA carboxylase, biotin carboxylaseSubName: Full=Acetyl-CoA carboxylase, biotin carboxylase; chromosome CDS193851 1350 - 0.651111
NA Tbd_1004 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS1072174 483 + 0.68323
NA Tbd_1799 long-chain fatty acid transport proteinSubName: Full=Long-chain fatty acid transport protein; Flags: Precursor; chromosome CDS1900631 1368 - 0.554094
NA Tbd_0700 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferaseSubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; chromosome CDS741440 567 - 0.661376
NA Tbd_2760 phospholipid/glycerol acyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS2838833 831 - 0.684717
NA Tbd_0182 acetyl-CoA biotin carboxyl carrierSubName: Full=Acetyl-CoA biotin carboxyl carrier; chromosome CDS195274 450 - 0.633333
NA Tbd_1672 enoyl-(acyl-carrier-protein) reductase (NADH)RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; chromosome CDS1757864 855 + 0.630409
NA Tbd_0796 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS839602 438 + 0.614155
NA Tbd_2007 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferaseSubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; chromosome CDS2094362 594 - 0.691919
NA Tbd_1051 phospholipase D/TransphosphatidylaseSubName: Full=Phospholipase D/Transphosphatidylase; chromosome CDS1115528 1260 - 0.63254
NA Tbd_1988 phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome CDS2078862 627 - 0.645933
NA Tbd_1469 short-chain dehydrogenase/reductaseSubName: Full=Short-chain dehydrogenase/reductase; chromosome CDS1553511 705 - 0.676596
NA Tbd_0976 putative proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1040896 510 - 0.631373
NA Tbd_1886 possible oxo-acyl acyl carrier protein dehydrogenaseSubName: Full=Possible oxo-acyl acyl carrier protein dehydrogenase; Flags: Precursor; chromosome CDS1985170 729 - 0.556927
NA Tbd_0791 1-deoxy-D-xylulose 5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; Flags: Precursor; chromosome CDS833188 1185 + 0.691983
NA Tbd_2756 3-oxoacyl-(ACP) reductaseSubName: Full=3-oxoacyl-(ACP) reductase; Flags: Precursor; chromosome CDS2835200 720 + 0.7
NA Tbd_0734 putative short chain dehydrogenaseSubName: Full=Putative short chain dehydrogenase; chromosome CDS777404 729 - 0.696845
NA Tbd_1912 acetyl-CoA carboxylase carboxyl transferase, beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS2008026 867 - 0.66436
NA Tbd_1548 Acyl carrier protein (ACP)RecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1632987 234 - 0.568376
NA Tbd_1305 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1383467 1026 - 0.734893
NA Tbd_2785 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome CDS2866289 765 + 0.703268
NA Tbd_2701 short-chain dehydrogenase/reductase (SDR) superfamilySubName: Full=Short-chain dehydrogenase/reductase (SDR) superfamily; chromosome CDS2783411 741 - 0.665317
NA Tbd_1550 malonyl CoA-acyl carrier protein transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS1634088 933 - 0.6806
NA Tbd_0588 acetyl-CoA carboxylase, alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS616878 969 + 0.642931
NA Tbd_1552 fatty acid synthesis plsX proteinRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS1636145 1020 - 0.65098
NA Tbd_0576 putative long-chain fatty acid transport proteinSubName: Full=Putative long-chain fatty acid transport protein; Flags: Precursor; chromosome CDS604484 1203 + 0.581047
NA Tbd_0194 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS205485 858 - 0.658508
NA Tbd_2753 probable 3-oxoacyl-(acyl-carrier-protein) synthaseSubName: Full=Probable 3-oxoacyl-(Acyl-carrier-protein) synthase; chromosome CDS2832708 1221 + 0.727273
NA Tbd_2594 fatty acid desaturaseSubName: Full=Fatty acid desaturase; chromosome CDS2669097 1173 - 0.653026
NA Tbd_1482 CDP-diacylglycerol-serineo-phosphatidyltransferaseSubName: Full=CDP-diacylglycerol-serine o-phosphatidyltransferase; chromosome CDS1570033 621 + 0.674718