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2024-06-06 07:10:21

Gene list

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COG category: Lipid transport and metabolism
Genomic element: chromosome 1

Number of genes found: 79

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VP0029 fatty oxidation complex, beta subunitRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome 1 CDS26892 1176 - 0.512755
VP0030 fatty oxidation complex, alpha subunitRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; EC=5.3.3.8; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome 1 CDS28083 2172 - 0.483886
VP0085 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS94138 1638 + 0.507937
VP0207 putative oxidoreductase (flagellin modification)SubName: Full=Putative oxidoreductase (Flagellin modification); chromosome 1 CDS217516 762 + 0.41601
VP0348 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS342567 549 + 0.468124
VP0351 putative long-chain-fatty-acid-CoA ligaseSubName: Full=Putative long-chain-fatty-acid-CoA ligase; chromosome 1 CDS346021 1809 + 0.462134
VP0537 LytB proteinRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome 1 CDS553595 966 + 0.477226
VP0608 GcpE proteinRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome 1 CDS632160 1119 + 0.457551
VP0626 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS655018 1137 + 0.432718
VP0645 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS675440 444 + 0.432432
VP0685 phosphatidylglycerophosphatase ARecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome 1 CDS717477 507 + 0.475345
VP0686 1-deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome 1 CDS718060 1866 - 0.463558
VP0740 kinase, GHMP familyRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome 1 CDS777619 888 - 0.460586
VP0808 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS840902 828 - 0.466184
VP0870 long-chain-fatty-acid-CoA ligaseSubName: Full=Long-chain-fatty-acid-CoA ligase; chromosome 1 CDS902659 1692 + 0.471631
VP0881 putative beta-ketoacyl-ACP synthaseSubName: Full=Putative beta-ketoacyl-ACP synthase; chromosome 1 CDS914577 1224 - 0.508987
VP0882 putative beta-ketoacyl-ACP reductaseSubName: Full=Putative beta-ketoacyl-ACP reductase; chromosome 1 CDS915797 726 - 0.501377
VP0883 putative beta-hydroxydecanoyl-ACP dehydraseSubName: Full=Putative beta-hydroxydecanoyl-ACP dehydrase; chromosome 1 CDS916519 465 - 0.449462
VP0884 putative 3-oxoacyl-ACP synthaseSubName: Full=Putative 3-oxoacyl-ACP synthase; chromosome 1 CDS916976 1188 - 0.493266
VP0891 putative (3R)-hydroxymyristoyl-(acyl carrier protein) dehydrataseSubName: Full=Putative (3R)-hydroxymyristoyl-(Acyl carrier protein) dehydratase; chromosome 1 CDS925408 369 - 0.449865
VP0892 putative surfactin synthetaseSubName: Full=Putative surfactin synthetase; chromosome 1 CDS925787 1371 - 0.473377
VP0894 putative acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome 1 CDS927752 258 - 0.406977
VP0895 putative acyl carrier proteinSubName: Full=Putative acyl carrier protein; chromosome 1 CDS928025 261 - 0.394636
VP0896 putative phospholipid biosynthesis acyltransferaseSubName: Full=Putative phospholipid biosynthesis acyltransferase; chromosome 1 CDS928299 780 - 0.39359
VP0933 o-succinylbenzoic acid-CoA ligaseSubName: Full=O-succinylbenzoic acid-CoA ligase; chromosome 1 CDS971155 1443 + 0.469161
VP0937 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS973984 1875 - 0.471467
VP0949 acyl-CoA thioesterase IISubName: Full=Acyl-CoA thioesterase II; chromosome 1 CDS990454 861 - 0.471545
VP1120 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS1178614 726 + 0.475207
VP1183 cardiolipin synthaseRecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; chromosome 1 CDS1241952 1455 - 0.47354
VP1193 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1254180 612 - 0.455882
VP1230 oxidoreductase, acyl-CoA dehydrogenase familySubName: Full=Oxidoreductase, acyl-CoA dehydrogenase family; chromosome 1 CDS1295697 2283 + 0.477004
VP1320 putative CDP-ribitol pyrophosphorylaseRecName: Full=Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase 2; AltName: Full=MEP cytidylyltransferase 2; Short=MCT 2; chromosome 1 CDS1400091 717 + 0.400279
VP1452 acyl carrier protein phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome 1 CDS1561398 585 - 0.442735
VP1492 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1602458 828 - 0.461353
VP1591 3-hydroxydecanoyl-(acyl-carrier-protein)dehydrat aseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome 1 CDS1683550 519 + 0.454721
VP1644 PrpE proteinSubName: Full=PrpE protein; chromosome 1 CDS1759485 1905 - 0.476115
VP1730 putative long-chain-fatty-acid-CoA ligaseSubName: Full=Putative long-chain-fatty-acid-CoA ligase; chromosome 1 CDS1845567 1560 + 0.477564
VP1732 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS1847844 795 + 0.484277
VP1826 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1926537 822 - 0.383212
VP1943 CDP-diacylglycerol-glycerol-3-phosphate3-phospha tidyltransferaseSubName: Full=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; chromosome 1 CDS2035030 558 - 0.451613
VP1964 putative long-chain-fatty-acid-CoA ligaseSubName: Full=Putative long-chain-fatty-acid-CoA ligase; chromosome 1 CDS2054705 1542 - 0.464332
VP1971 putative acyl-CoA hydrolaseSubName: Full=Putative acyl-CoA hydrolase; chromosome 1 CDS2063210 396 + 0.459596
VP2033 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS2131194 747 + 0.483266
VP2052 3-oxoacyl-(acyl-carrier-protein) synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome 1 CDS2152681 1251 - 0.470823
VP2053 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome 1 CDS2154025 234 - 0.41453
VP2054 3-oxoacyl-(acyl-carrier-protein) reductaseSubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; chromosome 1 CDS2154504 735 - 0.478912
VP2055 malonyl Coa-acyl carrier protein transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome 1 CDS2155273 924 - 0.469697
VP2056 3-oxoacyl-(acyl-carrier-protein) synthase IIIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III protein 1; AltName: Full=Beta-ketoacyl-ACP synthase III 1; Short=KAS III 1; chromosome 1 CDS2156273 951 - 0.458465
VP2057 fatty acid/phospholipid synthesis protein PlsXRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome 1 CDS2157229 1026 - 0.451267
VP2120 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome 1 CDS2224867 684 + 0.48538
VP2146 putative oxidoreductase proteinSubName: Full=Putative oxidoreductase protein; chromosome 1 CDS2257838 690 + 0.468116
VP2189 acetyl-CoA carboxylase, carboxyl transferase beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 1; Short=ACCase subunit beta 1; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta 1; EC=6.4.1.2; chromosome 1 CDS2298486 927 - 0.468177
VP2194 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome 1 CDS2307363 1212 - 0.480198
VP2208 fatty oxidation complex, alpha subunitRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome 1 CDS2320500 2112 - 0.464962
VP2209 fatty oxidation complex, beta subunitRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=ACSs; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Acyl-CoA ligase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome 1 CDS2322611 1308 - 0.5
VP2212 long-chain fatty acid transport proteinSubName: Full=Long-chain fatty acid transport protein; chromosome 1 CDS2326228 1251 + 0.433253
VP2213 long-chain fatty acid transport proteinSubName: Full=Long-chain fatty acid transport protein; chromosome 1 CDS2327788 1320 + 0.460606
VP2289 oxidoreductase, acyl-CoA dehydrogenase familySubName: Full=Oxidoreductase, acyl-CoA dehydrogenase family; chromosome 1 CDS2397135 2445 + 0.489571
VP2302 acetyl-CoA carboxylase, carboxyl transferase alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome 1 CDS2411456 960 - 0.469792
VP2307 (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehy drataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome 1 CDS2418710 453 - 0.441501
VP2312 1-deoxy-D-xylulose 5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome 1 CDS2424712 1206 - 0.465174
VP2313 phosphatidate cytidylyltransferaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; chromosome 1 CDS2425969 843 - 0.427046
VP2314 undecaprenyl diphosphate synthaseRecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; Short=UDS; AltName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP synthase; chromosome 1 CDS2426824 756 - 0.444444
VP2408 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2527875 1113 + 0.438455
VP2425 putative long-chain-fatty-acid-CoA ligaseSubName: Full=Putative long-chain-fatty-acid-CoA ligase; chromosome 1 CDS2542758 1707 + 0.471002
VP2445 putative lipid carrier proteinSubName: Full=Putative lipid carrier protein; chromosome 1 CDS2565083 534 - 0.417603
VP2558 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase MeCPsRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome 1 CDS2702280 477 - 0.473795
VP2559 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas eRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1; AltName: Full=MEP cytidylyltransferase 1; Short=MCT 1; chromosome 1 CDS2702774 705 - 0.466667
VP2568 holo-(acyl-carrier-protein) synthaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome 1 CDS2715360 381 - 0.467192
VP2657 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; chromosome 1 CDS2809226 726 - 0.465565
VP2698 putative V10 pilinSubName: Full=Putative V10 pilin; chromosome 1 CDS2852305 498 - 0.421687
VP2825 phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome 1 CDS2992086 858 + 0.481352
VP2878 acetyl-CoA synthaseRecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; chromosome 1 CDS3049669 1953 + 0.503328
VP2880 acetyl-CoA carboxylase, biotin carboxyl carrier proteinSubName: Full=Acetyl-CoA carboxylase, biotin carboxyl carrier protein; chromosome 1 CDS3052438 459 + 0.494553
VP2881 acetyl-CoA carboxylase, biotin carboxylaseSubName: Full=Acetyl-CoA carboxylase, biotin carboxylase; chromosome 1 CDS3052911 1344 + 0.485119
VP2934 phosphatidylserine synthaseSubName: Full=Phosphatidylserine synthase; chromosome 1 CDS3126321 1341 + 0.425056
VP2947 glycerol-3-phosphate acyltransferaseRecName: Full=Glycerol-3-phosphate acyltransferase; Short=GPAT; EC=2.3.1.15; chromosome 1 CDS3150685 2427 + 0.482901
VP2974 lysophospholipase L2SubName: Full=Lysophospholipase L2; chromosome 1 CDS3172573 1011 + 0.480712
VP3055 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS3261105 879 - 0.453925