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2024-06-01 21:12:08

Gene list

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COG category: Coenzyme transport and metabolism
Genomic element: chromosome

Number of genes found: 51

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Tropheryma whipplei TW08/27, TW08/27
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TW378 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS409719 696 - 0.406609
NA TW026 putative protein ligaseSubName: Full=Putative uncharacterized protein; chromosome CDS25738 747 + 0.441767
NA TW554 putative polyprenyl diphosphate synthaseSubName: Full=Putative polyprenyl diphosphate synthase; chromosome CDS589617 1065 + 0.428169
NA TW176 putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome CDS218878 450 + 0.431111
NA TW068 putative iron-siderophore uptake system ATP-binding componentSubName: Full=Putative iron-siderophore uptake system ATP-binding component; chromosome CDS59134 786 - 0.42112
NA TW408 putative flavoproteinSubName: Full=Putative flavoprotein; chromosome CDS445401 1233 + 0.476075
NA TW063 putative ubiquinone/menaquinone methyltransferaseRecName: Full=Demethylmenaquinone methyltransferase; EC=2.1.1.163; AltName: Full=Menaquinone biosynthesis C-methyltransferase UbiE; chromosome CDS53375 720 + 0.493056
NA TW227 putative aminotransferaseSubName: Full=Putative aminotransferase; chromosome CDS254911 864 + 0.472222
NA TW011 putative glutamine amidotransferaseSubName: Full=Putative glutamine amidotransferase; chromosome CDS11399 639 + 0.507042
NA TW745 porphyrin biosynthesis proteinSubName: Full=Porphyrin biosynthesis protein; EC=2.1.1.107; chromosome CDS841752 726 - 0.472452
NA TW062 putative chorismate binding enzymeSubName: Full=Putative chorismate binding enzyme; chromosome CDS52002 1278 - 0.438185
NA TW008 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS9640 693 - 0.492063
NA TW641 conserved hypothetical proteinRecName: Full=Nicotinate phosphoribosyltransferase; EC=6.3.4.21; chromosome CDS727985 1329 + 0.451467
NA TW505 conserved hypothetical proteinRecName: Full=Glutamine amidotransferase subunit PdxT; EC=2.6.-.-; AltName: Full=Glutamine amidotransferase glutaminase subunit PdxT; chromosome CDS543467 567 - 0.465608
NA TW506 conserved hypothetical proteinRecName: Full=Pyridoxal biosynthesis lyase PdxS; EC=4.-.-.-; chromosome CDS544033 864 - 0.488426
NA TW064 putative polyprenyl diphosphate synthaseSubName: Full=Putative polyprenyl diphosphate synthase; chromosome CDS54106 1017 + 0.487709
NA TW690 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS779537 612 + 0.418301
Dxs TW280 1-deoxy-D-xylulose 5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS313747 1890 + 0.48836
coaA TW156 pantothenate kinaseSubName: Full=Pantothenate kinase; EC=2.7.1.33; chromosome CDS180517 756 - 0.383598
coaD TW196 phosphopantetheine adenylyltransferaseRecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; Short=PPAT; chromosome CDS234982 531 + 0.474576
coaE TW478 dephospho-CoA kinaseRecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; chromosome CDS515051 741 - 0.45614
fgs TW288 folylpolyglutamate synthaseSubName: Full=Folylpolyglutamate synthase; EC=6.3.2.17; chromosome CDS327361 1362 + 0.450073
folD TW653 FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]RecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; chromosome CDS747349 876 - 0.449772
folE TW174 GTP cyclohydrolase ISubName: Full=GTP cyclohydrolase I; EC=3.5.4.16; chromosome CDS216002 546 + 0.498168
folP TW175 dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; EC=2.5.1.15; chromosome CDS216584 2298 + 0.462141
hemA TW750 glutamyl-tRNA reductaseRecName: Full=Glutamyl-tRNA reductase; Short=GluTR; EC=1.2.1.70; chromosome CDS846577 1344 + 0.469494
hemB TW744 delta-aminolevulinic acid dehydrataseRecName: Full=Delta-aminolevulinic acid dehydratase; EC=4.2.1.24; chromosome CDS840770 972 - 0.475309
hemC TW746 porphobilinogen deaminaseSubName: Full=Porphobilinogen deaminase; EC=4.3.1.8; chromosome CDS842474 966 - 0.47205
hemE TW749 uroporphyrinogen decarboxylaseRecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; chromosome CDS845400 1158 - 0.512953
hemH TW747 ferrochelataseRecName: Full=Ferrochelatase; EC=4.99.1.1; AltName: Full=Heme synthase; AltName: Full=Protoheme ferro-lyase; chromosome CDS843450 1176 - 0.497449
hemL TW743 glutamate-1-semialdehyde 2,1-aminomutaseRecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase; Short=GSA; EC=5.4.3.8; AltName: Full=Glutamate-1-semialdehyde aminotransferase; Short=GSA-AT; chromosome CDS839366 1401 - 0.493219
ilvB TW567 acetolactate synthaseRecName: Full=Acetolactate synthase; EC=2.2.1.6; chromosome CDS604602 1746 - 0.46449
ilvC TW565 ketol-acid reductoisomeraseRecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; chromosome CDS603297 1002 - 0.448104
ilvE TW564 branched-chain amino acid aminotransferaseRecName: Full=Branched-chain-amino-acid aminotransferase; EC=2.6.1.42; chromosome CDS602111 1086 - 0.476059
lipA TW301 lipoic acid synthetaseRecName: Full=Lipoyl synthase; EC=2.8.1.8; AltName: Full=Lip-syn; Short=LS; AltName: Full=Lipoate synthase; AltName: Full=Lipoic acid synthase; AltName: Full=Sulfur insertion protein LipA; chromosome CDS338230 1056 - 0.481061
lipB TW302 lipoate-protein ligase BRecName: Full=Octanoyltransferase; EC=2.3.1.181; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase; chromosome CDS339304 678 - 0.460177
menA TW080 1,4-dihydroxy-2-naphthoate octaprenyltransferaseSubName: Full=1,4-dihydroxy-2-naphthoate octaprenyltransferase; EC=2.5.1.-; chromosome CDS72796 912 + 0.472588
menB TW120 naphthoate synthaseSubName: Full=Naphthoate synthase; EC=4.1.3.36; chromosome CDS128106 918 + 0.509804
menD TW078 putative menaquinone biosynthesis protein MenDRecName: Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Short=SEPHCHC synthase; EC=2.2.1.9; AltName: Full=Menaquinone biosynthesis protein MenD; chromosome CDS70637 1584 + 0.49053
metK TW409 S-adenosylmethionine synthetaseRecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; chromosome CDS446643 1188 + 0.453704
nadD TW296 nicotinate-nucleotide adenylyltransferaseRecName: Full=Probable nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; AltName: Full=Deamido-NAD(+) diphosphorylase; AltName: Full=Deamido-NAD(+) pyrophosphorylase; AltName: Full=Nicotinate mononucleotide adenylyltransferase; Short=NaMN adenylyltransferase; chromosome CDS333790 561 + 0.461676
nadE TW365 NH(3)-dependent NAD(+) synthetaseRecName: Full=NH(3)-dependent NAD(+) synthetase; EC=6.3.1.5; chromosome CDS397571 816 + 0.469363
panB TW510 3-methyl-2-oxobutanoate hydroxymethyltransferaseRecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; EC=2.1.2.11; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT; chromosome CDS548929 810 + 0.446914
panC TW073 pantoate--beta-alanine ligaseRecName: Full=Pantothenate synthetase; Short=PS; EC=6.3.2.1; AltName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; chromosome CDS64669 867 + 0.460208
ribA TW709 GTP cyclohydrolase IIRecName: Full=GTP cyclohydrolase-2; EC=3.5.4.25; AltName: Full=GTP cyclohydrolase II; chromosome CDS802594 636 + 0.441824
ribB TW708 3,4-dihydroxy-2-butanone 4-phosphate synthaseRecName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase; Short=DHBP synthase; EC=4.1.99.12; chromosome CDS801930 648 + 0.481481
ribD TW706 riboflavin biosynthesis protein RibDRecName: Full=Riboflavin biosynthesis protein RibD; chromosome CDS800071 1116 + 0.47043
ribE TW707 riboflavin synthase alpha chainSubName: Full=Riboflavin synthase alpha chain; EC=2.5.1.9; chromosome CDS801259 645 + 0.457364
ribF TW180 riboflavin biosynthesis protein RibF [includes: riboflavin kinase]SubName: Full=Riboflavin biosynthesis protein RibF [includes: riboflavin kinase]; EC=2.7.1.26; chromosome CDS221811 939 + 0.438765
ribH TW710 6,7-dimethyl-8-ribityllumazine synthaseRecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=LS; Short=Lumazine synthase; EC=2.5.1.78; chromosome CDS803253 471 + 0.464968
trpE TW384 anthranilate synthase component ISubName: Full=Anthranilate synthase component I; EC=4.1.3.27; chromosome CDS416640 1431 + 0.438854