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2024-06-02 17:45:59

Gene list

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COG category: Carbohydrate transport and metabolism
Genomic element: chromosome I

Number of genes found: 129

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VC0028 dihydroxy-acid dehydrataseRecName: Full=Dihydroxy-acid dehydratase; Short=DAD; EC=4.2.1.9; chromosome I CDS24792 1842 - 0.547231
VC0069 multidrug resistance protein, putativeSubName: Full=Multidrug resistance protein, putative; chromosome I CDS69296 1203 + 0.501247
VC0075 MadN proteinSubName: Full=MadN protein; chromosome I CDS75266 888 - 0.483108
VC0081 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS79052 912 - 0.506579
VC0207 PTS system, sucrose-specific IIBC component, putativeRecName: Full=PTS system N-acetylmuramic acid-specific EIIBC component; AltName: Full=EIIBC-MurNAc; Includes: RecName: Full=N-acetylmuramic acid-specific phosphotransferase enzyme IIB component; EC=2.7.1.69; AltName: Full=PTS system N-acetylmuramic acid-specific EIIB component; Includes: RecName: Full=N-acetylmuramic acid permease IIC component; AltName: Full=PTS system N-acetylmuramic acid-specific EIIC component; chromosome I CDS214449 1449 + 0.518979
VC0239 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS243212 1773 - 0.452341
VC0240 ADP-L-glycero-D-mannoheptose-6-epimeraseRecName: Full=ADP-L-glycero-D-manno-heptose-6-epimerase; EC=5.1.3.20; AltName: Full=ADP-L-glycero-beta-D-manno-heptose-6-epimerase; Short=ADP-glyceromanno-heptose 6-epimerase; Short=ADP-hep 6-epimerase; Short=AGME; chromosome I CDS245143 945 - 0.461376
VC0242 phosphomannomutaseRecName: Full=Phosphomannomutase; Short=PMM; EC=5.4.2.8; chromosome I CDS247929 1392 + 0.386494
VC0246 lipopolysaccharide/O-antigen transport proteinSubName: Full=Lipopolysaccharide/O-antigen transport protein; chromosome I CDS252918 795 + 0.348428
VC0247 lipopolysaccharide/O-antigen transport proteinSubName: Full=Lipopolysaccharide/O-antigen transport protein; chromosome I CDS253651 816 + 0.363971
VC0260 mannosyl-transferaseSubName: Full=Mannosyl-transferase; chromosome I CDS265374 1866 - 0.435155
VC0262 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; chromosome I CDS267392 972 + 0.450617
VC0269 mannose-6-phosphate isomeraseRecName: Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; chromosome I CDS274509 1200 + 0.4125
VC0270 ROK family proteinSubName: Full=ROK family protein; chromosome I CDS275674 981 + 0.442406
VC0285 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolaseSubName: Full=4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; chromosome I CDS294219 606 - 0.551155
VC0286 gluconate permease, putativeSubName: Full=Gluconate permease, putative; chromosome I CDS294837 1377 - 0.547567
VC0287 thermoresistant gluconokinaseSubName: Full=Thermoresistant gluconokinase; chromosome I CDS296367 516 + 0.501938
VC0288 phosphogluconate dehydrataseSubName: Full=Phosphogluconate dehydratase; chromosome I CDS296819 1857 + 0.542273
VC0302 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS309994 1191 + 0.534845
VC0336 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independentRecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Short=BPG-independent PGAM; Short=Phosphoglyceromutase; Short=iPGM; EC=5.4.2.12; chromosome I CDS354684 1533 - 0.510763
VC0337 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS356359 942 - 0.524416
VC0374 glucose-6-phosphate isomeraseRecName: Full=Glucose-6-phosphate isomerase; Short=GPI; EC=5.3.1.9; AltName: Full=Phosphoglucose isomerase; Short=PGI; AltName: Full=Phosphohexose isomerase; Short=PHI; chromosome I CDS389886 1653 + 0.488808
VC0425 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS455459 798 + 0.496241
VC0473 transketolase 1RecName: Full=Transketolase 1; Short=TK 1; EC=2.2.1.1; chromosome I CDS501605 2085 + 0.534293
VC0476 D-erythrose 4-phosphate dehydrogenaseRecName: Full=D-erythrose-4-phosphate dehydrogenase; Short=E4PDH; EC=1.2.1.72; chromosome I CDS506780 1158 + 0.463731
VC0477 phosphoglycerate kinaseRecName: Full=Phosphoglycerate kinase; EC=2.7.2.3; chromosome I CDS508071 1179 + 0.489398
VC0478 fructose-bisphosphate aldolase, class IISubName: Full=Fructose-bisphosphate aldolase, class II; chromosome I CDS509405 1077 + 0.471681
VC0485 pyruvate kinase IRecName: Full=Pyruvate kinase; EC=2.7.1.40; chromosome I CDS514732 1413 - 0.475584
VC0486 transcriptional regulator, DeoR familySubName: Full=Transcriptional regulator, DeoR family; chromosome I CDS516560 783 + 0.452107
VC0579 phosphoheptose isomerase, putativeRecName: Full=Phosphoheptose isomerase; EC=5.3.1.28; AltName: Full=Sedoheptulose 7-phosphate isomerase; chromosome I CDS608662 591 - 0.475465
VC0611 phosphoglucomutase/phosphomannomutase, putativeSubName: Full=Phosphoglucomutase/phosphomannomutase, putative; chromosome I CDS642814 1413 - 0.491861
VC0612 cellobiose/cellodextrin-phosphorylase, putativeSubName: Full=Cellobiose/cellodextrin-phosphorylase, putative; chromosome I CDS644349 2406 - 0.504988
VC0613 beta-N-acetylhexosaminidaseSubName: Full=Beta-N-acetylhexosaminidase; chromosome I CDS646873 1914 - 0.50209
VC0614 conserved hypothetical proteinRecName: Full=Glucosamine kinase GspK; EC=2.7.1.8; AltName: Full=GlcN kinase; chromosome I CDS648783 978 - 0.527607
VC0639 phosphoglucomutase/phosphomannomutase family protein MrsARecName: Full=Phosphoglucosamine mutase; EC=5.4.2.10; chromosome I CDS680988 1341 + 0.478002
VC0689 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS735892 1800 + 0.508889
VC0692 beta-hexosaminidaseRecName: Full=Beta-hexosaminidase; EC=3.2.1.52; AltName: Full=Beta-N-acetylhexosaminidase; AltName: Full=N-acetyl-beta-glucosaminidase; chromosome I CDS739874 993 + 0.523666
VC0745 inositol monophosphate family proteinRecName: Full=Inositol-1-monophosphatase; Short=I-1-Pase; Short=IMPase; Short=Inositol-1-phosphatase; EC=3.1.3.25; chromosome I CDS798822 867 - 0.478662
VC0798 citrate lyase, beta subunitSubName: Full=Citrate lyase, beta subunit; chromosome I CDS854565 891 + 0.547699
VC0853 conserved hypothetical proteinRecName: Full=NAD kinase; EC=2.7.1.23; AltName: Full=ATP-dependent NAD kinase; chromosome I CDS918527 885 - 0.468927
VC0910 PTS system, trehalose-specific IIBC componentSubName: Full=PTS system, trehalose-specific IIBC component; chromosome I CDS969788 1437 + 0.499652
VC0911 trehalose-6-phosphate hydrolaseSubName: Full=Trehalose-6-phosphate hydrolase; chromosome I CDS971304 1689 + 0.470693
VC0964 PTS system, glucose-specific IIA componentSubName: Full=PTS system, glucose-specific IIA component; chromosome I CDS1029142 510 - 0.454902
VC0965 phosphoenolpyruvate-protein phosphotransferaseRecName: Full=Phosphoenolpyruvate-protein phosphotransferase; EC=2.7.3.9; AltName: Full=Phosphotransferase system, enzyme I; chromosome I CDS1029760 1722 - 0.461672
VC0966 phosphocarrier protein HPrRecName: Full=Phosphocarrier protein HPr; EC=2.7.11.-; AltName: Full=Histidine-containing protein; chromosome I CDS1031615 258 - 0.465116
VC0993 N-acetylglucosamine repressorSubName: Full=N-acetylglucosamine repressor; chromosome I CDS1058502 1215 - 0.469136
VC0994 N-acetylglucosamine-6-phosphate deacetylaseRecName: Full=N-acetylglucosamine-6-phosphate deacetylase; EC=3.5.1.25; AltName: Full=GlcNAc 6-P deacetylase; chromosome I CDS1059719 1137 - 0.458223
VC0995 PTS system, N-acetylglucosamine-specific IIABC componentSubName: Full=PTS system, N-acetylglucosamine-specific IIABC component; chromosome I CDS1061324 1572 + 0.489822
VC1069 glyceraldehyde 3-phosphate dehydrogenaseSubName: Full=Glyceraldehyde 3-phosphate dehydrogenase; chromosome I CDS1136296 1002 + 0.48004
VC1071 transporter, putativeSubName: Full=Transporter, putative; chromosome I CDS1137847 1236 + 0.507282
VC1123 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1191714 540 + 0.488889
VC1129 inosine-guanosine kinaseSubName: Full=Inosine-guanosine kinase; chromosome I CDS1196815 1305 + 0.429119
VC1240 alpha-ribazole-5`-phosphate phosphatase CobC, putativeSubName: Full=Alpha-ribazole-5`-phosphate phosphatase CobC, putative; chromosome I CDS1313900 603 + 0.52073
VC1261 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1335279 1215 + 0.485597
VC1281 PTS system, cellobiose-specific IIB componentSubName: Full=PTS system, cellobiose-specific IIB component; chromosome I CDS1356926 306 + 0.408497
VC1282 PTS system, cellobiose-specific IIC componentSubName: Full=PTS system, cellobiose-specific IIC component; chromosome I CDS1357310 1341 + 0.457122
VC1283 PTS system, cellobiose-specific IIA componentSubName: Full=PTS system, cellobiose-specific IIA component; chromosome I CDS1358697 336 + 0.428571
VC1284 6-phospho-beta-glucosidaseSubName: Full=6-phospho-beta-glucosidase; chromosome I CDS1359014 1323 + 0.464097
VC1325 galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding proteinSubName: Full=Galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein; chromosome I CDS1409080 975 + 0.501538
VC1327 galactoside ABC transporter, ATP-binding proteinRecName: Full=Galactose/methyl galactoside import ATP-binding protein MglA; EC=3.6.3.17; chromosome I CDS1410224 1545 + 0.462783
VC1328 galactoside ABC transporter, permease proteinSubName: Full=Galactoside ABC transporter, permease protein; chromosome I CDS1411773 1014 + 0.476331
VC1333 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1416672 552 - 0.485507
VC1336 carboxyphosphonoenolpyruvate phosphonomutaseRecName: Full=Methylisocitrate lyase; EC=4.1.3.30; AltName: Full=2-methylisocitrate lyase; chromosome I CDS1419710 927 + 0.523193
VC1391 multidrug transporter, putativeSubName: Full=Multidrug transporter, putative; chromosome I CDS1481602 1407 + 0.52452
VC1411 multidrug resistance protein VceBSubName: Full=Multidrug resistance protein VceB; chromosome I CDS1504292 1536 + 0.468099
VC1532 ROK family proteinRecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; chromosome I CDS1644672 909 - 0.49725
VC1539 conserved hypothetical proteinRecName: Full=Uncharacterized protein VC_1539; chromosome I CDS1650858 867 + 0.448674
VC1549 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding proteinSubName: Full=Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein; chromosome I CDS1661257 1305 + 0.483525
VC1550 glycerol-3-phosphate ABC transporter, permease proteinSubName: Full=Glycerol-3-phosphate ABC transporter, permease protein; chromosome I CDS1662637 882 + 0.510204
VC1551 glycerol-3-phosphate ABC transporter, permease proteinSubName: Full=Glycerol-3-phosphate ABC transporter, permease protein; chromosome I CDS1663528 843 + 0.465006
VC1552 glycerol-3-phosphate ABC transporter, ATP-binding proteinRecName: Full=sn-glycerol-3-phosphate import ATP-binding protein UgpC; EC=3.6.3.20; chromosome I CDS1664360 1182 + 0.497462
VC1553 glycerol-3-phosphate regulon repressorSubName: Full=Glycerol-3-phosphate regulon repressor; chromosome I CDS1665566 762 + 0.488189
VC1555 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1667144 513 - 0.512671
VC1558 6-phospho-beta-glucosidaseSubName: Full=6-phospho-beta-glucosidase; chromosome I CDS1669192 1437 - 0.473208
VC1594 aldose 1-epimeraseRecName: Full=Aldose 1-epimerase; EC=5.1.3.3; AltName: Full=Galactose mutarotase; chromosome I CDS1705924 1053 - 0.51377
VC1595 galactokinaseRecName: Full=Galactokinase; EC=2.7.1.6; AltName: Full=Galactose kinase; chromosome I CDS1706985 1218 - 0.519704
VC1597 multidrug transporter, putativeSubName: Full=Multidrug transporter, putative; chromosome I CDS1709719 1434 - 0.490237
VC1618 multidrug resistance protein, putativeSubName: Full=Multidrug resistance protein, putative; chromosome I CDS1730964 1218 + 0.498358
VC1632 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1757297 1437 + 0.51009
VC1634 multidrug resistance proteinSubName: Full=Multidrug resistance protein; chromosome I CDS1759459 1206 - 0.515755
VC1656 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1788409 864 - 0.487269
VC1690 alpha-1,6-galactosidase, putativeSubName: Full=Alpha-1,6-galactosidase, putative; chromosome I CDS1823364 1125 - 0.504889
VC1697 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1830805 831 + 0.494585
VC1726 glycogen synthaseRecName: Full=Glycogen synthase; EC=2.4.1.21; AltName: Full=Starch [bacterial glycogen] synthase; chromosome I CDS1863877 1455 - 0.487972
VC1727 glucose-1-phosphate adenylyltransferaseRecName: Full=Glucose-1-phosphate adenylyltransferase 1; EC=2.7.7.27; AltName: Full=ADP-glucose pyrophosphorylase 1; Short=ADPGlc PPase 1; AltName: Full=ADP-glucose synthase 1; chromosome I CDS1865333 1218 - 0.465517
VC1777 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1927130 1284 - 0.453271
VC1778 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1928421 522 - 0.411877
VC1779 C4-dicarboxylate-binding periplasmic proteinSubName: Full=C4-dicarboxylate-binding periplasmic protein; chromosome I CDS1928993 966 - 0.44617
VC1781 conserved hypothetical proteinRecName: Full=Putative N-acetylmannosamine-6-phosphate 2-epimerase; EC=5.1.3.9; AltName: Full=ManNAc-6-P epimerase; chromosome I CDS1930173 723 + 0.471646
VC1782 ROK family proteinRecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; chromosome I CDS1930883 864 + 0.450231
VC1783 N-acetylglucosamine-6-phosphate deacetylaseRecName: Full=N-acetylglucosamine-6-phosphate deacetylase; EC=3.5.1.25; AltName: Full=GlcNAc 6-P deacetylase; chromosome I CDS1931750 1137 + 0.449428
VC1784 neuraminidaseRecName: Full=Sialidase; EC=3.2.1.18; AltName: Full=Neuraminidase; Short=NANase; Flags: Precursor; chromosome I CDS1933231 2424 + 0.451733
VC1820 PTS system, fructose-specific IIA componentSubName: Full=PTS system, fructose-specific IIA component; chromosome I CDS1961098 441 + 0.37415
VC1821 PTS system, fructose-specific IIBC componentSubName: Full=PTS system, fructose-specific IIBC component; chromosome I CDS1961550 1404 + 0.497863
VC1822 PTS system, fructose-specific IIABC componentSubName: Full=PTS system, fructose-specific IIABC component; chromosome I CDS1963028 1866 - 0.495177
VC1823 PTS system, fructose-specific IIB componentSubName: Full=PTS system, fructose-specific IIB component; chromosome I CDS1965110 300 + 0.493333
VC1824 PTS system, nitrogen regulatory IIA component, putativeSubName: Full=PTS system, nitrogen regulatory IIA component, putative; chromosome I CDS1965418 780 + 0.476923
VC1826 PTS system, fructose-specific IIABC componentSubName: Full=PTS system, fructose-specific IIABC component; chromosome I CDS1967400 1902 + 0.50368
VC1827 mannose-6-phosphate isomeraseRecName: Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; chromosome I CDS1969417 1167 + 0.461011
VC1897 Hit family proteinSubName: Full=Hit family protein; chromosome I CDS2043911 351 - 0.478632
VC1912 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2061646 1170 - 0.454701
VC1927 C4-dicarboxylate transport proteinSubName: Full=C4-dicarboxylate transport protein; chromosome I CDS2078993 1362 - 0.505874
VC1928 C4-dicarboxylate transport protein DctQ, putativeSubName: Full=C4-dicarboxylate transport protein DctQ, putative; chromosome I CDS2080358 699 - 0.466381
VC1929 C4-dicarboxylate-binding periplasmic proteinSubName: Full=C4-dicarboxylate-binding periplasmic protein; chromosome I CDS2081087 999 - 0.487487
VC1966 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2115867 1881 + 0.496013
VC2000 glyceraldehyde 3-phosphate dehydrogenaseSubName: Full=Glyceraldehyde 3-phosphate dehydrogenase; chromosome I CDS2152265 996 + 0.468875
VC2001 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2153408 891 + 0.491582
VC2007 transcriptional regulator, ROK familySubName: Full=Transcriptional regulator, ROK family; chromosome I CDS2159327 1218 - 0.460591
VC2008 pyruvate kinase IIRecName: Full=Pyruvate kinase; EC=2.7.1.40; chromosome I CDS2160989 1446 + 0.487552
VC2013 PTS system, glucose-specific IIBC componentSubName: Full=PTS system, glucose-specific IIBC component; chromosome I CDS2166647 1503 - 0.477711
VC2032 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2186633 876 + 0.502283
VC2075 histidine triad family proteinSubName: Full=Histidine triad family protein; chromosome I CDS2232809 444 + 0.493243
VC2095 phosphoglucomutaseSubName: Full=Phosphoglucomutase; chromosome I CDS2256154 1647 - 0.48816
VC2217 beta-N-acetylhexosaminidaseSubName: Full=Beta-N-acetylhexosaminidase; chromosome I CDS2371485 2652 - 0.495475
VC2230 phosphoheptose isomeraseRecName: Full=Phosphoheptose isomerase; EC=5.3.1.28; AltName: Full=Sedoheptulose 7-phosphate isomerase; chromosome I CDS2383272 576 - 0.456597
VC2300 ampG protein, putativeSubName: Full=AmpG protein, putative; chromosome I CDS2454099 1389 + 0.478762
VC2348 phosphopentomutaseRecName: Full=Phosphopentomutase; EC=5.4.2.7; AltName: Full=Phosphodeoxyribomutase; chromosome I CDS2504399 1221 - 0.505324
VC2447 enolaseRecName: Full=Enolase; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase; AltName: Full=2-phosphoglycerate dehydratase; chromosome I CDS2626616 1302 - 0.480031
VC2480 ribose-5-phosphate isomeraseRecName: Full=Ribose-5-phosphate isomerase A; EC=5.3.1.6; AltName: Full=Phosphoriboisomerase A; Short=PRI; chromosome I CDS2659090 657 + 0.494673
VC2487 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2667410 1089 - 0.431589
VC2531 PTS system, nitrogen regulatory IIA componentSubName: Full=PTS system, nitrogen regulatory IIA component; chromosome I CDS2713688 447 + 0.469799
VC2533 phosphocarrier protein NPrRecName: Full=Phosphocarrier protein NPr; EC=2.7.11.-; AltName: Full=Nitrogen-related HPr; chromosome I CDS2715016 279 + 0.516129
VC2544 fructose-1,6-bisphosphataseRecName: Full=Fructose-1,6-bisphosphatase class 1; Short=FBPase class 1; EC=3.1.3.11; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1; chromosome I CDS2724901 1011 + 0.487636
VC2566 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2748179 810 + 0.516049
VC2625 ribulose-phosphate 3-epimeraseRecName: Full=Ribulose-phosphate 3-epimerase; EC=5.1.3.1; chromosome I CDS2796111 711 - 0.507736
VC2670 triosephosphate isomeraseRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase; chromosome I CDS2837230 798 + 0.507519
VC2688 glpX proteinRecName: Full=Fructose-1,6-bisphosphatase; chromosome I CDS2855699 1008 + 0.529762
VC2689 6-phosphofructokinase, isozyme IRecName: Full=ATP-dependent 6-phosphofructokinase; Short=ATP-PFK; Short=Phosphofructokinase; EC=2.7.1.11; AltName: Full=Phosphohexokinase; chromosome I CDS2856783 996 - 0.492972
VC2761 multidrug resistance proteinSubName: Full=Multidrug resistance protein; chromosome I CDS2946786 1230 + 0.489431