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2024-05-29 02:12:30

Gene list

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COG category: Carbohydrate transport and metabolism
Genomic element: chromosome 2

Number of genes found: 124

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VPA0038 glucosamine-6-phosphate isomeraseRecName: Full=Glucosamine-6-phosphate deaminase; EC=3.5.99.6; AltName: Full=GlcN6P deaminase; Short=GNPDA; AltName: Full=Glucosamine-6-phosphate isomerase; chromosome 2 CDS31871 801 - 0.456929
VPA0055 chitinaseSubName: Full=Chitinase; chromosome 2 CDS45762 2547 - 0.494307
VPA0080 putative sugar-phosphate isomeraseSubName: Full=Putative sugar-phosphate isomerase; chromosome 2 CDS70611 636 + 0.474843
VPA0082 putative 2-dehydro-3-deoxygluconokinaseSubName: Full=Putative 2-dehydro-3-deoxygluconokinase; chromosome 2 CDS72333 930 + 0.487097
VPA0083 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolaseSubName: Full=4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; chromosome 2 CDS73274 624 + 0.485577
VPA0098 putative efflux pump proteinSubName: Full=Putative efflux pump protein; chromosome 2 CDS89885 1491 + 0.488263
VPA0102 putative isomeraseSubName: Full=Putative isomerase; chromosome 2 CDS94374 2691 + 0.490896
VPA0116 permeaseSubName: Full=Permease; chromosome 2 CDS108394 1353 + 0.495196
VPA0117 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS109763 1137 + 0.534741
VPA0119 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS112525 900 + 0.477778
VPA0168 multidrug resistance protein DSubName: Full=Multidrug resistance protein D; chromosome 2 CDS163045 1206 - 0.501658
VPA0180 phospho-beta-glucosidase BSubName: Full=Phospho-beta-glucosidase B; chromosome 2 CDS176615 1392 - 0.45977
VPA0230 putative sugar phosphotransferase component II BSubName: Full=Putative sugar phosphotransferase component II B; chromosome 2 CDS235189 288 - 0.447917
VPA0231 phosphotransferase enzyme II, A componentSubName: Full=Phosphotransferase enzyme II, A component; chromosome 2 CDS235544 444 - 0.472973
VPA0241 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS246294 909 + 0.475248
VPA0297 PTS system, fructose-specific IIBC componentSubName: Full=PTS system, fructose-specific IIBC component; chromosome 2 CDS297376 1401 - 0.47823
VPA0298 PTS system, fructose-specific IIA componentSubName: Full=PTS system, fructose-specific IIA component; chromosome 2 CDS298788 441 - 0.38322
VPA0303 putative regulatory proteinSubName: Full=Putative regulatory protein; chromosome 2 CDS303524 741 + 0.479082
VPA0314 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS312565 909 - 0.480748
VPA0333 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS326797 1209 - 0.468983
VPA0357 putative beta-mannosidase precursorSubName: Full=Putative beta-mannosidase; chromosome 2 CDS349622 2409 + 0.467829
VPA0372 phosphoenolpyruvate synthaseRecName: Full=Phosphoenolpyruvate synthase; Short=PEP synthase; EC=2.7.9.2; AltName: Full=Pyruvate, water dikinase; chromosome 2 CDS367205 2388 - 0.469849
VPA0389 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS383844 2880 + 0.474306
VPA0403 putative membrane proteinSubName: Full=Putative membrane protein; chromosome 2 CDS400001 909 - 0.455446
VPA0439 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS428376 636 + 0.471698
VPA0447 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS437900 1650 - 0.433939
VPA0461 alpha-amylaseRecName: Full=Alpha-amylase; EC=3.2.1.1; chromosome 2 CDS456193 1350 + 0.46
VPA0492 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS499136 1035 + 0.457971
VPA0500 putative PTS system, mannitol-specific enzyme II componentSubName: Full=Putative PTS system, mannitol-specific enzyme II component; chromosome 2 CDS506781 444 + 0.432432
VPA0501 mannitol-specific PTS system enzyme II componentSubName: Full=Mannitol-specific PTS system enzyme II component; chromosome 2 CDS507237 1428 + 0.496499
VPA0520 multidrug resistance protein DSubName: Full=Multidrug resistance protein D; chromosome 2 CDS526902 1194 + 0.457286
VPA0525 putative transporter, DME familySubName: Full=Putative transporter, DME family; chromosome 2 CDS529665 891 - 0.482604
VPA0535 putative phosphomannomutaseSubName: Full=Putative phosphomannomutase; chromosome 2 CDS537839 1695 - 0.485546
VPA0565 putative glucose dehydrogenase-BSubName: Full=Putative glucose dehydrogenase-B; chromosome 2 CDS564628 1122 - 0.467023
VPA0569 putative permeaseSubName: Full=Putative permease; chromosome 2 CDS568291 903 + 0.477298
VPA0613 putative permeaseSubName: Full=Putative permease; chromosome 2 CDS617839 879 + 0.492605
VPA0669 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS687256 306 - 0.457516
VPA0673 methylglyoxal synthaseRecName: Full=Methylglyoxal synthase; Short=MGS; EC=4.2.3.3; chromosome 2 CDS692846 456 - 0.480263
VPA0674 periplasmic protein TorTSubName: Full=Periplasmic protein TorT; chromosome 2 CDS693365 1005 - 0.475622
VPA0701 putative oxalate/formate antiporterSubName: Full=Putative oxalate/formate antiporter; chromosome 2 CDS726618 1233 - 0.479319
VPA0757 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS787957 885 - 0.463277
VPA0811 PTS system, fructose-specific IIBC componentSubName: Full=PTS system, fructose-specific IIBC component; chromosome 2 CDS842345 1734 - 0.497117
VPA0812 1-phosphofructokinaseRecName: Full=Phosphofructokinase; chromosome 2 CDS844098 975 - 0.495385
VPA0813 PTS system, fructose-specific IIA/FPR componentSubName: Full=PTS system, fructose-specific IIA/FPR component; chromosome 2 CDS845084 1131 - 0.485411
VPA0823 pyruvate kinase IIRecName: Full=Pyruvate kinase; EC=2.7.1.40; chromosome 2 CDS853898 1479 - 0.487492
VPA0824 putative regulatory protein UhpCSubName: Full=Putative regulatory protein UhpC; chromosome 2 CDS855511 1380 - 0.473913
VPA0832 chitodextrinaseSubName: Full=Chitodextrinase; chromosome 2 CDS865637 3165 + 0.485308
VPA0833 glucose-1-phosphate adenylyltransferaseRecName: Full=Glucose-1-phosphate adenylyltransferase 2; EC=2.7.7.27; AltName: Full=ADP-glucose pyrophosphorylase 2; Short=ADPGlc PPase 2; AltName: Full=ADP-glucose synthase 2; chromosome 2 CDS868910 1215 - 0.455967
VPA0835 inosine-guanosine kinaseSubName: Full=Inosine-guanosine kinase; chromosome 2 CDS872467 1305 - 0.460536
VPA0904 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS942059 360 - 0.516667
VPA0905 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS942584 312 - 0.474359
VPA0963 MFS family, hexose phosphate transport proteinSubName: Full=MFS family, hexose phosphate transport protein; chromosome 2 CDS1005595 1395 + 0.463799
VPA0966 regulatory protein UhpCSubName: Full=Regulatory protein UhpC; chromosome 2 CDS1009246 1341 + 0.490679
VPA0967 putative mannose-6-phosphate isomeraseRecName: Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; chromosome 2 CDS1010711 1236 + 0.470065
VPA0973 putative MFS family transport proteinSubName: Full=Putative MFS family transport protein; chromosome 2 CDS1018868 1161 + 0.481481
VPA0999 alpha-amylaseSubName: Full=Alpha-amylase; chromosome 2 CDS1050712 1524 - 0.461942
VPA1016 multidrug resistance protein DSubName: Full=Multidrug resistance protein D; chromosome 2 CDS1069624 1134 - 0.448854
VPA1019 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1072272 528 - 0.458333
VPA1083 ribokinaseSubName: Full=Ribokinase; chromosome 2 CDS1142215 918 - 0.485839
VPA1084 ribose ABC transporter, periplasmic D-ribose-binding proteinSubName: Full=Ribose ABC transporter, periplasmic D-ribose-binding protein; chromosome 2 CDS1143361 879 - 0.499431
VPA1085 ribose ABC transporter, permease proteinSubName: Full=Ribose ABC transporter, permease protein; chromosome 2 CDS1144325 984 - 0.480691
VPA1086 ribose ABC transporter, ATP-binding proteinRecName: Full=Ribose import ATP-binding protein RbsA; EC=3.6.3.17; chromosome 2 CDS1145305 1506 - 0.465471
VPA1087 ribose ABC transporter proteinRecName: Full=D-ribose pyranase; EC=5.5.1.n1; chromosome 2 CDS1146833 420 - 0.466667
VPA1177 putative chitinase ASubName: Full=Putative chitinase A; chromosome 2 CDS1245266 1293 - 0.472544
VPA1180 transaldolase BRecName: Full=Transaldolase; EC=2.2.1.2; chromosome 2 CDS1248158 951 + 0.462671
VPA1181 transketolase 1RecName: Full=Transketolase 2; Short=TK 2; EC=2.2.1.1; chromosome 2 CDS1249232 1992 + 0.490964
VPA1184 putative drug transport transmembrane proteinSubName: Full=Putative drug transport transmembrane protein; chromosome 2 CDS1253136 1179 - 0.469042
VPA1215 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1288149 942 + 0.476645
VPA1217 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1289874 1038 - 0.463391
VPA1221 LuxP proteinRecName: Full=Autoinducer 2-binding periplasmic protein LuxP; Flags: Precursor; chromosome 2 CDS1295259 1098 - 0.442623
VPA1230 glyceraldehyde 3-phosphate dehydrogenaseSubName: Full=Glyceraldehyde 3-phosphate dehydrogenase; chromosome 2 CDS1304527 1434 + 0.467225
VPA1283 putative MFS transporterSubName: Full=Putative MFS transporter; chromosome 2 CDS1361618 1215 + 0.463374
VPA1341 putative Spa29, component of the Mxi-Spa secretion machinerySubName: Full=Putative Spa29, component of the Mxi-Spa secretion machinery; chromosome 2 CDS1413045 684 - 0.375731
VPA1384 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1455728 378 - 0.455026
VPA1385 putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome 2 CDS1456060 333 - 0.444444
VPA1399 maltose ABC transporter, permease proteinRecName: Full=Maltose transport system permease protein MalG; chromosome 2 CDS1469083 891 - 0.461279
VPA1400 maltose ABC transporter, permease proteinRecName: Full=Maltose transport system permease protein MalF; chromosome 2 CDS1469986 1575 - 0.460952
VPA1401 maltose ABC transporter, periplasmic maltose-binding proteinSubName: Full=Maltose ABC transporter, periplasmic maltose-binding protein; chromosome 2 CDS1471640 1179 - 0.465649
VPA1402 maltose/maltodextrin ABC transporter, ATP-binding proteinRecName: Full=Maltose/maltodextrin import ATP-binding protein MalK; EC=3.6.3.19; chromosome 2 CDS1473493 1119 + 0.45487
VPA1413 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1486671 402 + 0.440298
VPA1420 PTS system, fructose-specific IIABC componentSubName: Full=PTS system, fructose-specific IIABC component; chromosome 2 CDS1492924 1872 - 0.486645
VPA1421 PTS system, fructose-specific IIB componentSubName: Full=PTS system, fructose-specific IIB component; chromosome 2 CDS1495063 303 + 0.471947
VPA1422 putative PTS system, nitrogen regulatory IIA componentSubName: Full=Putative PTS system, nitrogen regulatory IIA component; chromosome 2 CDS1495374 777 + 0.465894
VPA1424 PTS system, fructose-specific IIABC componentSubName: Full=PTS system, fructose-specific IIABC component; chromosome 2 CDS1497413 1908 + 0.499476
VPA1425 mannose-6-phosphate isomeraseRecName: Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; chromosome 2 CDS1499396 1233 + 0.484996
VPA1429 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1503361 2046 - 0.463832
VPA1484 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1584962 1182 - 0.468697
VPA1491 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1590307 744 + 0.469086
VPA1529 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1631144 927 - 0.459547
VPA1564 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1661034 945 + 0.458201
VPA1569 putative transaldolaseSubName: Full=Putative transaldolase; chromosome 2 CDS1666704 675 + 0.453333
VPA1574 putative membrane transport proteinRecName: Full=Multidrug resistance protein MdtL; chromosome 2 CDS1670691 1191 + 0.47691
VPA1576 putative transmembrane proteinSubName: Full=Putative transmembrane protein; chromosome 2 CDS1672966 870 + 0.482759
VPA1593 putative cyclodextrin glucanotransferaseSubName: Full=Putative cyclodextrin glucanotransferase; chromosome 2 CDS1688249 2634 + 0.493166
VPA1605 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1704585 390 - 0.423077
VPA1616 alpha-amylaseSubName: Full=Alpha-amylase; chromosome 2 CDS1714130 2061 - 0.492965
VPA1618 1,4-alpha-glucan branching enzymeRecName: Full=1,4-alpha-glucan branching enzyme GlgB; EC=2.4.1.18; AltName: Full=1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; AltName: Full=Alpha-(1->4)-glucan branching enzyme; AltName: Full=Glycogen branching enzyme; Short=BE; chromosome 2 CDS1717200 2268 - 0.492945
VPA1619 4-alpha-glucanotransferaseSubName: Full=4-alpha-glucanotransferase; chromosome 2 CDS1719663 2181 - 0.491976
VPA1620 maltodextrin phosphorylaseRecName: Full=Phosphorylase; EC=2.4.1.1; chromosome 2 CDS1721961 2454 - 0.486553
VPA1628 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1731307 297 + 0.468013
VPA1638 putative pullulanase precursorSubName: Full=Putative pullulanase; chromosome 2 CDS1743486 3990 + 0.491479
VPA1641 putative maltogenic amylaseSubName: Full=Putative maltogenic amylase; chromosome 2 CDS1749551 1611 - 0.476102
VPA1644 maltose-inducible porinRecName: Full=Maltoporin; AltName: Full=Maltose-inducible porin; Flags: Precursor; chromosome 2 CDS1753012 1299 - 0.464973
VPA1645 glycogen operon protein GlgXSubName: Full=Glycogen operon protein GlgX; chromosome 2 CDS1754755 1992 + 0.48243
VPA1647 hypothetical multidrug resistance protein DSubName: Full=Hypothetical multidrug resistance protein D; chromosome 2 CDS1757631 1209 + 0.501241
VPA1660 putative transport proteinSubName: Full=Putative transport protein; chromosome 2 CDS1779042 1206 + 0.503317
VPA1663 putative binding protein component of ABC sugar transporterSubName: Full=Putative binding protein component of ABC sugar transporter; chromosome 2 CDS1783317 1245 - 0.527711
VPA1667 PTS system, glucose-specific IIBC componentSubName: Full=PTS system, glucose-specific IIBC component; chromosome 2 CDS1786945 1443 + 0.520443
VPA1671 ABC-type arabinose transport system, permease componentSubName: Full=ABC-type arabinose transport system, permease component; chromosome 2 CDS1791228 990 - 0.488889
VPA1672 L-arabinose transport ATP-binding proteinRecName: Full=Arabinose import ATP-binding protein AraG; EC=3.6.3.17; chromosome 2 CDS1792232 1521 - 0.463511
VPA1673 L-arabinose-binding periplasmic protein precursorSubName: Full=L-arabinose-binding periplasmic protein; chromosome 2 CDS1793803 1002 - 0.47006
VPA1675 sugar isomerase SgaE, AraD/FucA familySubName: Full=Sugar isomerase SgaE, AraD/FucA family; chromosome 2 CDS1796872 741 + 0.503374
VPA1676 putative L-arabinose isomeraseRecName: Full=L-arabinose isomerase; EC=5.3.1.4; chromosome 2 CDS1797619 1497 + 0.478958
VPA1691 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1809953 696 + 0.45546
VPA1695 6-phospho-beta-glucosidaseSubName: Full=6-phospho-beta-glucosidase; chromosome 2 CDS1813073 1314 + 0.491629
VPA1700 mannonate dehydrataseRecName: Full=Mannonate dehydratase; EC=4.2.1.8; AltName: Full=D-mannonate hydro-lyase; chromosome 2 CDS1818647 1188 - 0.494949
VPA1702 putative dicarboxylate-binding periplasmic proteinSubName: Full=Putative dicarboxylate-binding periplasmic protein; chromosome 2 CDS1820863 984 - 0.471545
VPA1703 putative small integral C4-dicarboxylate membrane transport proteinSubName: Full=Putative small integral C4-dicarboxylate membrane transport protein; chromosome 2 CDS1822162 522 + 0.47318
VPA1704 putative integral membrane protein, possible transporterSubName: Full=Putative integral membrane protein, possible transporter; chromosome 2 CDS1822695 1302 + 0.506912
VPA1705 mannonate oxidoreductaseSubName: Full=Mannonate oxidoreductase; chromosome 2 CDS1824048 1467 + 0.511929
VPA1706 putative uronate isomeraseRecName: Full=Uronate isomerase; EC=5.3.1.12; AltName: Full=Glucuronate isomerase; AltName: Full=Uronic isomerase; chromosome 2 CDS1825524 1413 + 0.503185
VPA1707 putative 2-dehydro-3-deoxygluconokinaseSubName: Full=Putative 2-dehydro-3-deoxygluconokinase; chromosome 2 CDS1826940 978 + 0.496933
VPA1708 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolaseSubName: Full=4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase; chromosome 2 CDS1827927 630 + 0.504762
VPA1744 putative PTS system, sucrose-specific IIBC componentRecName: Full=PTS system N-acetylmuramic acid-specific EIIBC component; AltName: Full=EIIBC-MurNAc; Includes: RecName: Full=N-acetylmuramic acid-specific phosphotransferase enzyme IIB component; EC=2.7.1.69; AltName: Full=PTS system N-acetylmuramic acid-specific EIIB component; Includes: RecName: Full=N-acetylmuramic acid permease IIC component; AltName: Full=PTS system N-acetylmuramic acid-specific EIIC component; chromosome 2 CDS1865492 1455 + 0.484536