Gene list
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COG category: Nucleotide transport and metabolism
Genomic element: chromosome
Number of genes found: 44
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Tropheryma whipplei str. Twist, twist | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | TWT051 | cytidylate kinase/GTP-binding protein fusion | SubName: Full=Cytidylate kinase/GTP-binding protein fusion; EC=2.7.4.14; | chromosome | CDS | 49849 | 2061 | + | 0.483261 |
NA | TWT085 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 95131 | 342 | - | 0.435673 |
NA | TWT263 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 347906 | 537 | + | 0.450652 |
NA | TWT751 | unknown | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 861941 | 513 | + | 0.448343 |
NA | TWT282 | HIT-like protein | SubName: Full=HIT-like protein; | chromosome | CDS | 364783 | 324 | + | 0.425926 |
NA | TWT621 | unknown | RecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; | chromosome | CDS | 728035 | 582 | - | 0.5 |
NA | TWT322 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 404703 | 270 | - | 0.488889 |
NA | TWT796 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 915326 | 405 | - | 0.48642 |
adk | TWT534 | adenylate kinase | RecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; | chromosome | CDS | 638168 | 561 | - | 0.481283 |
carA | TWT366 | carbamoyl-phosphate synthase small chain | RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; | chromosome | CDS | 453446 | 1146 | - | 0.461606 |
carB | TWT365 | carbamoyl-phosphate synthase large chain | RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; | chromosome | CDS | 450148 | 3312 | - | 0.451691 |
dcd | TWT787 | dCTP deaminase | RecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; | chromosome | CDS | 904018 | 591 | - | 0.483926 |
deoD | TWT018 | purine nucleoside phosphorylase | RecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; | chromosome | CDS | 18059 | 885 | - | 0.503955 |
dgt | TWT287 | dGTP triphosphohydrolase | SubName: Full=dGTP triphosphohydrolase; EC=3.1.5.1; | chromosome | CDS | 368048 | 1440 | + | 0.428472 |
dut | TWT487 | deoxyuridine 5'-triphosphate nucleotidohydrolase | RecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; | chromosome | CDS | 580587 | 441 | - | 0.498866 |
gmk | TWT363 | guanylate kinase | RecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; | chromosome | CDS | 448307 | 915 | - | 0.452459 |
guaA | TWT079 | GMP synthase | RecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; | chromosome | CDS | 87137 | 1512 | + | 0.465608 |
guaB2 | TWT076 | inosine-5'-monophosphate dehydrogenase-like protein | SubName: Full=Inosine-5-monophosphate dehydrogenase-like protein; EC=1.1.1.205; | chromosome | CDS | 84777 | 1155 | + | 0.500433 |
hpt | TWT589 | hypoxanthine-guanine phosphoribosyltransferase | SubName: Full=Hypoxanthine-guanine phosphoribosyltransferase; EC=2.4.2.8; | chromosome | CDS | 679112 | 552 | - | 0.442029 |
ndkA | TWT475 | nucleoside diphosphate kinase | RecName: Full=Nucleoside diphosphate kinase; EC=2.7.4.6; | chromosome | CDS | 563561 | 411 | - | 0.489051 |
nrdA | TWT683 | ribonucleotide reductase alpha chain | RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; | chromosome | CDS | 795682 | 2379 | - | 0.446406 |
nrdB | TWT682 | ribonucleotide reductase beta chain | RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; | chromosome | CDS | 794603 | 984 | - | 0.411585 |
prsA | TWT187 | ribose-phosphate pyrophosphokinase | SubName: Full=Ribose-phosphate pyrophosphokinase; EC=2.7.6.1; | chromosome | CDS | 236862 | 1047 | - | 0.464183 |
purA | TWT792 | adenylosuccinate synthetase | RecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; | chromosome | CDS | 910129 | 1290 | + | 0.466667 |
purB | TWT791 | adenylosuccinate lyase | SubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; | chromosome | CDS | 908622 | 1446 | + | 0.469571 |
purC | TWT109 | phosphoribosylaminoimidazole-succinocarboxamidesynthase | RecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; | chromosome | CDS | 127361 | 918 | - | 0.438998 |
purD | TWT725 | phosphoribosylamine--glycine ligase | RecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; | chromosome | CDS | 835697 | 1260 | + | 0.469841 |
purE | TWT027 | phosphoribosylaminoimidazole carboxylase catalytic subunit | RecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; | chromosome | CDS | 28322 | 543 | + | 0.480663 |
purF | TWT723 | amidophosphoribosyltransferase | RecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; | chromosome | CDS | 832455 | 1515 | - | 0.479868 |
purH | TWT084 | phosphoribosylaminoimidazolecarboxamideformyltransferase | SubName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; EC=3.5.4.10; | chromosome | CDS | 93415 | 1629 | + | 0.470227 |
purK | TWT026 | phosphoribosylaminoimidazole carboxylase ATPase subunit | SubName: Full=Phosphoribosylaminoimidazole carboxylase ATPase subunit; EC=4.1.1.21; | chromosome | CDS | 26789 | 1455 | + | 0.480412 |
purL | TWT794 | phosphoribosylformylglycinamidine synthase II | RecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; | chromosome | CDS | 911879 | 2343 | - | 0.488263 |
purM | TWT724 | phosphoribosylformylglycinamidine cyclo-ligase | RecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; | chromosome | CDS | 834026 | 1014 | - | 0.5 |
purN | TWT083 | phosphoribosylglycinamide formyltransferase | SubName: Full=Phosphoribosylglycinamide formyltransferase; EC=2.1.2.2; | chromosome | CDS | 92728 | 648 | + | 0.444444 |
purQ | TWT795 | phosphoribosylformylglycinamidine synthase I | SubName: Full=Phosphoribosylformylglycinamidine synthase I; EC=6.3.5.3; | chromosome | CDS | 914642 | 681 | - | 0.468429 |
pyrB | TWT196 | aspartate carbamoyltransferase | SubName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; | chromosome | CDS | 259506 | 1221 | + | 0.459459 |
pyrC | TWT367 | dihydroorotase | RecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; | chromosome | CDS | 454633 | 1287 | - | 0.445221 |
pyrD | TWT238 | dihydroorotate oxidase | SubName: Full=Dihydroorotate oxidase; EC=1.3.98.1; | chromosome | CDS | 321833 | 1008 | + | 0.430556 |
pyrF | TWT364 | orotidine-5'-phosphate decarboxylase | RecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; | chromosome | CDS | 449240 | 912 | - | 0.466009 |
pyrG | TWT100 | CTP synthase | RecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; | chromosome | CDS | 111967 | 1638 | - | 0.474969 |
pyrH | TWT447 | uridylate kinase | RecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; | chromosome | CDS | 539785 | 696 | - | 0.491379 |
thyX | TWT616 | thymidylate synthase | RecName: Full=Thymidylate synthase ThyX; Short=TS; Short=TSase; EC=2.1.1.148; | chromosome | CDS | 723301 | 735 | - | 0.434014 |
tmk | TWT695 | thymidylate kinase | RecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; | chromosome | CDS | 809160 | 600 | - | 0.445 |
umpA | TWT743 | orotate phosphoribosyltransferase | RecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; | chromosome | CDS | 853734 | 645 | - | 0.486822 |