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2024-06-02 10:30:57

Gene list

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COG category: Nucleotide transport and metabolism
Genomic element: chromosome 1

Number of genes found: 89

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA2628 Putative deoxyguanosinetriphosphate triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome 1 CDS3044009 1311 + 0.446987
NA PBPRA3496 putative adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome 1 CDS3952926 1053 + 0.45584
NA PBPRA0781 putative GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome 1 CDS864532 1584 + 0.445076
NA PBPRA2446 putative orotidine 5-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome 1 CDS2831295 696 - 0.454023
NA PBPRA1277 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1448696 246 - 0.373984
NA PBPRA1469 putative phosphoribosylaminoimidazole-succinocar boxamide synthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome 1 CDS1665306 1104 - 0.407609
NA PBPRA0630 putative Deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome 1 CDS689607 774 + 0.440568
NA PBPRA2260 putative ureidoglycolate hydrolaseSubName: Full=Putative ureidoglycolate hydrolase; chromosome 1 CDS2603555 600 - 0.393333
NA PBPRA1638 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1869164 567 + 0.349206
NA PBPRA1213 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1362937 1311 + 0.395118
AGR_C_42 PBPRA2244 putative xanthine dehydrogenase, XdhB subunitSubName: Full=Putative xanthine dehydrogenase, XdhB subunit; chromosome 1 CDS2583773 2403 + 0.443196
BA1592 PBPRA2266 hypothetical xanthine/uracil permeaseSubName: Full=Hypothetical xanthine/uracil permease; chromosome 1 CDS2609434 1407 + 0.45629
BLR8122 PBPRA1061 hypothetical diadenosine tetraphosphate hydrolaseSubName: Full=Hypothetical diadenosine tetraphosphate hydrolase; chromosome 1 CDS1178435 429 - 0.433566
C5468 PBPRA0633 putative purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type 1; Short=PNP 1; EC=2.4.2.1; chromosome 1 CDS693282 726 + 0.433884
CARB PBPRA0597 putative carbamoylphosphate synthase large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome 1 CDS650935 3234 + 0.446815
CV4330 PBPRA2405 Putative dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome 1 CDS2778105 1029 + 0.448008
CYAA PBPRA3526 putative adenylate cyclaseSubName: Full=Putative adenylate cyclase; chromosome 1 CDS3985864 2574 - 0.419969
DHT PBPRA1991 hypothetical hydrolase ygeZSubName: Full=Hypothetical hydrolase ygeZ; chromosome 1 CDS2289385 1497 - 0.446226
EBIG1822 PBPRA1952 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2249441 522 - 0.350575
ECS0533 PBPRA2836 Predicted orfSubName: Full=Predicted orf; chromosome 1 CDS3282244 1683 - 0.420677
ECS3752 PBPRA1942 putative proteoglycanSubName: Full=Putative proteoglycan; chromosome 1 CDS2238094 1329 - 0.440933
FHS PBPRA2764 putative formate-tetrahydrofolate ligaseRecName: Full=Formate--tetrahydrofolate ligase; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase; Short=FHS; Short=FTHFS; chromosome 1 CDS3206048 1755 + 0.463248
GMK PBPRA0191 putative guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome 1 CDS197313 627 - 0.409888
GUAD PBPRA2246 putative guanine aminohydrolaseSubName: Full=Putative guanine aminohydrolase; chromosome 1 CDS2587059 1338 + 0.415546
HD0887 PBPRA0629 putative NupC family proteinSubName: Full=Putative NupC family protein; chromosome 1 CDS687541 1254 + 0.437799
HD0998 PBPRA2907 putative uracil permeaseSubName: Full=Putative uracil permease; chromosome 1 CDS3338125 1254 + 0.439394
HD1933 PBPRA1200 putative thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome 1 CDS1348813 630 + 0.44127
MSSA PBPRA2451 putative cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome 1 CDS2835855 732 - 0.439891
NRDB PBPRA2460 putative ribonucleoside-diphosphate reductase, beta subunitSubName: Full=Putative ribonucleoside-diphosphate reductase,beta subunit; chromosome 1 CDS2850046 1134 + 0.390653
PA5496 PBPRA2143 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2464941 708 + 0.409605
PA5497 PBPRA2142 conserved hypothetical proteinRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome 1 CDS2462770 2151 + 0.437471
PFS PBPRA0538 putative MTA/SAH nucleosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome 1 CDS572578 699 - 0.436338
PLU0519 PBPRA1397 Hypothetical NupC family proteinSubName: Full=Hypothetical NupC family protein; chromosome 1 CDS1571720 1218 + 0.429392
PLU0519 PBPRA2012 putative NupC, nucleoside permeaseSubName: Full=Putative NupC, nucleoside permease; chromosome 1 CDS2318112 1209 - 0.42928
PLU1241 PBPRA0836 Putative xanthine-guanine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome 1 CDS925291 459 + 0.422658
PLU1372 PBPRA0759 putative nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome 1 CDS839155 429 + 0.410256
PLU2759 PBPRA2909 putative uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome 1 CDS3340070 627 - 0.419458
PLU2764 PBPRA0724 putative exopolyphosphataseSubName: Full=Putative exopolyphosphatase; chromosome 1 CDS801105 1188 - 0.430135
PLU3317 PBPRA0788 Putative phosphoribosylformylglycinamidine (FGAM) synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome 1 CDS873584 3969 + 0.466364
PURK PBPRA3574 Hypothetical phosphoribosylaminoimidazole carboxylase, catalytic subunitSubName: Full=Hypothetical phosphoribosylaminoimidazole carboxylase, catalytic subunit; chromosome 1 CDS4041303 606 - 0.432343
PURM PBPRA2910 putative phosphoribosylformylglycinamidine cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome 1 CDS3340886 1041 + 0.456292
PURU-2 PBPRA1448 formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; chromosome 1 CDS1625630 873 + 0.490263
PYRB PBPRA0474 putative aspartate transcarbamylase catalytic subunitRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome 1 CDS497388 930 - 0.434409
PYRI PBPRA0473 putative aspartate carbamoyltransferase, regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome 1 CDS496907 504 - 0.369048
RB0787 PBPRA2261 putative allantoicaseRecName: Full=Probable allantoicase; EC=3.5.3.4; AltName: Full=Allantoate amidinohydrolase; chromosome 1 CDS2604349 993 - 0.4572
S0155 PBPRA2536 hypotheticaldeoxyguanosinetriphosphatetriphosphohydrolaseSubName: Full=Hypothetical deoxyguanosinetriphosphatetriphosphohydrolase; chromosome 1 CDS2942079 1533 + 0.385519
S0421 PBPRA1016 putative adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome 1 CDS1125634 525 + 0.432381
S0426 PBPRA1024 putative adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome 1 CDS1135012 645 + 0.460465
S1011 PBPRA1767 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome 1 CDS2035405 1011 + 0.41543
S1294 PBPRA2849 putative phosphoribosylpyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome 1 CDS3298692 948 + 0.451477
S2693 PBPRA2911 putative phosphoribosylglycinamide formyltransferase 2SubName: Full=Putative phosphoribosylglycinamide formyltransferase 2; chromosome 1 CDS3341931 645 + 0.415504
S2695 PBPRA0725 hypotetical protein chromosome 1 CDS802445 168 - 0.470238
S3149 PBPRA3148 hypothetical Xanthosine triphosphate pyrophosphataseRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome 1 CDS3582964 750 + 0.464
S4087 PBPRA0199 putative orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome 1 CDS208098 642 + 0.451713
S4600 PBPRA3345 putative adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome 1 CDS3793726 1299 - 0.463433
SCO6213 PBPRA2267 putative hydroxydechloroatrazine ethylaminohydrolaseSubName: Full=Putative hydroxydechloroatrazine ethylaminohydrolase; chromosome 1 CDS2611028 1365 + 0.463736
SF0029 PBPRA0596 putative carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome 1 CDS649764 1155 + 0.464069
SF2316 PBPRA2459 putative ribonucleoside-diphosphate reductase, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome 1 CDS2847734 2262 + 0.417772
SF3852 PBPRA3543 putative exopolyphosphataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome 1 CDS4006371 1494 + 0.463186
SF4078 PBPRA3419 putativeosphoribosylaminoimidazolecarboxamidefor myltransferase/IMPcyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; chromosome 1 CDS3867684 1635 + 0.473394
SF4190 PBPRA1536 hypothetical isoaspartyl dipeptidaseRecName: Full=Isoaspartyl dipeptidase; EC=3.4.19.-; chromosome 1 CDS1740502 1167 - 0.396744
SF4273 PBPRA3313 putative 2`,3`-cyclic-nucleotide 2`-phosphodiesteraseSubName: Full=Putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase; chromosome 1 CDS3762102 1989 + 0.419809
SLL0509 PBPRA1434 hypothetical Ap4A phosphorylase IISubName: Full=Hypothetical Ap4A phosphorylase II; chromosome 1 CDS1608530 804 + 0.404229
SMB21011 PBPRA2243 putative xanthine dehydrogenase, XdhA subunitSubName: Full=Putative xanthine dehydrogenase, XdhA subunit; chromosome 1 CDS2582332 1449 + 0.436853
SMB21293 PBPRA1930 putative guanine aminohydrolaseSubName: Full=Putative guanine aminohydrolase; chromosome 1 CDS2219488 1317 - 0.420653
SMC02513 PBPRA1931 putative xanthine permeaseSubName: Full=Putative xanthine permease; chromosome 1 CDS2221025 1482 - 0.431849
SO1218 PBPRA0631 putative thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome 1 CDS690681 1233 + 0.482563
SO1631 PBPRA2966 putative Uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome 1 CDS3399682 723 - 0.449516
SO2794 PBPRA1478 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1678579 873 - 0.408935
SO3441 PBPRA3080 putative CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome 1 CDS3517545 1638 - 0.433455
STM1883 PBPRA1685 putative phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome 1 CDS1930187 1176 - 0.465136
STM2183 PBPRA1689 putative cytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome 1 CDS1934681 888 - 0.431306
STM2568 PBPRA0786 Putative cytosine/adenosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome 1 CDS870681 516 + 0.476744
STY0706 PBPRA2062 putstive inosine-uridine preferring nucleoside hydrolase family proteinRecName: Full=Pyrimidine-specific ribonucleoside hydrolase RihA; EC=3.2.-.-; AltName: Full=Cytidine/uridine-specific hydrolase; chromosome 1 CDS2376433 933 + 0.444802
STY1301 PBPRA1084 putative thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome 1 CDS1203249 579 + 0.398964
STY4046 PBPRA0186 putative xanthine/uracil permeaseSubName: Full=Putative xanthine/uracil permease; chromosome 1 CDS190071 1380 - 0.465217
STY4809 PBPRA2472 putative tRNA-(MS[2]IO[6]A)-hydroxylaseSubName: Full=Putative tRNA-(MS[2]IO[6]A)-hydroxylase; chromosome 1 CDS2863902 792 + 0.421717
T0175 PBPRA3180 putative hypoxanthine ribosyl transferaseSubName: Full=Putative hypoxanthine ribosyl transferase; chromosome 1 CDS3607879 597 - 0.400335
T1688 PBPRA1145 putative adenylosuccinate lyaseSubName: Full=Putative adenylosuccinate lyase; chromosome 1 CDS1284662 1368 - 0.436404
UDK PBPRA1170 Putative uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome 1 CDS1317551 747 + 0.425703
UDP2 PBPRA1431 putative uridine phosphorylaseSubName: Full=Putative uridine phosphorylase; chromosome 1 CDS1604570 756 + 0.464286
VP1530 PBPRA1851 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2133565 984 - 0.40752
VV0679 PBPRA0581 putative thymidylate synthetase (thyA)RecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome 1 CDS634773 852 + 0.422535
VV2192 PBPRA1605 putative hymidylate kinaseSubName: Full=Putative hymidylate kinase; chromosome 1 CDS1838787 561 - 0.402852
VV3143 PBPRA3420 putative phosphoribosylamine-glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome 1 CDS3869441 1290 + 0.48062
Y1770 PBPRA2403 putative Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolasesSubName: Full=Putative Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; chromosome 1 CDS2775127 351 - 0.418803
YPO2772 PBPRA2648 putative glutamine phosphoribosylpyrophosphate amidotransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome 1 CDS3066259 1518 - 0.418972
Z2008 PBPRA1066 putative formyltetrahydrofolate deformylaseSubName: Full=Putative formyltetrahydrofolate deformylase; chromosome 1 CDS1184151 840 - 0.42619
Z5353 PBPRA1221 Putative uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome 1 CDS1375343 768 + 0.436198