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2024-06-10 15:40:35

Gene list

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COG category: Nucleotide transport and metabolism
Genomic element: chromosome

Number of genes found: 76

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Lactobacillus acidophilus NCFM, NCFM
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA LBA0820 MTA-SAH nucleosidaseSubName: Full=MTA-SAH nucleosidase; EC=3.2.2.9; chromosome CDS802320 696 + 0.357759
NA LBA1776 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1802609 414 + 0.306763
NA LBA0199 inosine-5'-monophosphate dehydrogenaseRecName: Full=Inosine-5-monophosphate dehydrogenase; Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH; EC=1.1.1.205; chromosome CDS194769 1143 + 0.4007
NA LBA0145 2-deoxyribosyltransferaseSubName: Full=2-deoxyribosyltransferase; chromosome CDS140422 480 - 0.352083
NA LBA0577 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS564184 630 - 0.374603
NA LBA1745 guanylate kinaseSubName: Full=Guanylate kinase; chromosome CDS1781748 450 - 0.362222
NA LBA0434 putative UDP-sugar hydrolaseSubName: Full=Putative UDP-sugar hydrolase; chromosome CDS408247 1383 + 0.350687
NA LBA0766 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS752055 624 + 0.366987
NA LBA0210 DCMP deaminaseSubName: Full=DCMP deaminase; EC=3.5.4.12; chromosome CDS205352 480 + 0.38125
NA LBA0240 xanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; Short=XPRTase; EC=2.4.2.22; chromosome CDS236972 579 - 0.397237
NA LBA0375 cytidine-deoxycytidylate deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS350778 507 + 0.351085
NA LBA0426 hypothetical proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS401677 609 + 0.380952
NA LBA1893 GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS1903498 993 + 0.377643
NA LBA1150 carbamoyl-phosphate synthase small subunitSubName: Full=Carbamoyl-phosphate synthase small subunit; EC=6.3.5.5; chromosome CDS1126126 1056 - 0.325758
NA LBA1057 HIT-like proteinSubName: Full=HIT-like protein; chromosome CDS1041831 468 + 0.294872
NA LBA1067 putative phosphorylaseSubName: Full=Putative phosphorylase; chromosome CDS1047882 762 + 0.374016
NA LBA1064 phosphorylaseSubName: Full=Phosphorylase; chromosome CDS1045682 762 + 0.349081
NA LBA0865 nucleoside hydrolaseSubName: Full=Nucleoside hydrolase; EC=3.2.2.-; chromosome CDS847719 927 - 0.378641
NA LBA1950 deoxyguanosine kinaseRecName: Full=Deoxyguanosine kinase; Short=DGK; Short=DGUO kinase; EC=2.7.1.113; AltName: Full=Deoxynucleoside kinase complex I F-component; chromosome CDS1961926 687 + 0.349345
NA LBA0233 CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS229463 1620 + 0.382716
NA LBA0345 dUTPaseSubName: Full=DUTPase; chromosome CDS326061 552 + 0.333333
NA LBA1562 formate-tetrahydrofolate ligaseRecName: Full=Formate--tetrahydrofolate ligase 2; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase 2; Short=FHS 2; Short=FTHFS 2; chromosome CDS1554848 1662 - 0.395307
NA LBA0381 thymidylate (dTMP) kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS356078 651 + 0.347158
NA LBA0239 xanthine permeaseSubName: Full=Xanthine permease; chromosome CDS235684 1281 - 0.393443
NA LBA1949 deoxyadenosine kinaseRecName: Full=Deoxyadenosine kinase; Short=DADO kinase; Short=DAK; EC=2.7.1.76; AltName: Full=Deoxynucleoside kinase complex I S-component; chromosome CDS1961253 648 + 0.356481
NA LBA1325 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS1303939 615 - 0.386992
NA LBA1149 carbamoyl-phosphate synthase large subunitSubName: Full=Carbamoyl-phosphate synthase large subunit; EC=6.3.5.5; chromosome CDS1122937 3186 - 0.318267
NA LBA0391 deoxyribose-p aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS362931 714 + 0.345938
NA LBA0562 uracil permeaseSubName: Full=Uracil permease; chromosome CDS547925 1335 - 0.413483
NA LBA0160 anaerobic NTP reductaseSubName: Full=Anaerobic NTP reductase; EC=1.17.4.2; chromosome CDS152886 2196 + 0.365209
NA LBA1631 putative deoxyribosyltransferaseSubName: Full=Putative deoxyribosyltransferase; chromosome CDS1639451 504 - 0.34127
NA LBA1052 putative glutamine amidotransferaseSubName: Full=Putative glutamine amidotransferase; chromosome CDS1037526 669 + 0.366218
NA LBA1535 adenosine deaminaseSubName: Full=Adenosine deaminase; EC=3.5.4.4; chromosome CDS1527708 1002 + 0.355289
NA LBA1586 histidine triad HIT family proteinSubName: Full=Histidine triad HIT family protein; chromosome CDS1578929 432 + 0.351852
NA LBA1066 putative phosphorylaseSubName: Full=Putative phosphorylase; chromosome CDS1047095 771 + 0.343709
NA LBA0312 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS300928 657 + 0.343988
NA LBA0770 uracil p-ribosyltransferase uppRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS755702 630 + 0.393651
NA LBA0041 ribonucleoside triphosphate reductaseRecName: Full=Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase; Short=RTPR; EC=1.17.4.2; chromosome CDS35642 2235 - 0.38613
NA LBA0245 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS239826 1551 + 0.399742
NA LBA1750 ribonucleotide reductaseSubName: Full=Ribonucleotide reductase; chromosome CDS1785520 936 + 0.353632
NA LBA0131 ribose-p pyrokinaseSubName: Full=Ribose-p pyrokinase; EC=2.7.6.1; chromosome CDS124218 987 + 0.378926
NA LBA0967 cytidin monophosphate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; chromosome CDS941219 663 + 0.357466
NA LBA1268 uridine mono phosphate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS1247065 726 - 0.37741
aprT LBA1242 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS1217854 528 - 0.38447
carA LBA1380 carbamoyl-phosphate synthase, small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS1359389 1086 - 0.38582
carB LBA1379 carbamoyl-phosphate synthase, large subunit (glutamine-hydrolyzing)RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS1356208 3189 - 0.389777
flaR LBA1143 putative adenylate kinase DNA topology modulatorSubName: Full=Putative adenylate kinase DNA topology modulator; EC=2.7.4.3; chromosome CDS1117000 492 - 0.323171
hprT LBA0613 hypothetical proteinSubName: Full=Putative uncharacterized protein hprT; chromosome CDS599925 570 + 0.34386
iunH LBA0591 nucleoside hydrolaseSubName: Full=Nucleoside hydrolase; chromosome CDS576209 927 + 0.395901
mutT LBA1055 mutator proteinSubName: Full=Mutator protein; chromosome CDS1040442 624 + 0.376603
nrdI LBA1749 ribonucleotide reductaseSubName: Full=Ribonucleotide reductase; chromosome CDS1785071 447 + 0.326622
prsA LBA0224 ribose-p-pyrophosphokinaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS220709 975 + 0.388718
purA LBA1892 adenylosuccinate synthaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS1902010 1290 - 0.378295
purB LBA1891 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; EC=4.3.2.2; chromosome CDS1900711 1296 - 0.388889
purC LBA1559 phosphoribosylaminoimidazole-succinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS1552283 717 - 0.391911
purD LBA1551 phosphoribosylamine-glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS1543237 1272 - 0.434748
purE LBA1561 phosphoribosylaminoimidazole carboxylaseRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS1554345 486 - 0.432099
purH LBA1552 phosphoribosylaminoimidazolecarboxamideformyltransferaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome CDS1544521 1542 - 0.392996
purK LBA1560 phosphoribosylaminoimidazole carboxylaseSubName: Full=Phosphoribosylaminoimidazole carboxylase; EC=4.1.1.21; chromosome CDS1553204 1080 - 0.405556
purL LBA1556 phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS1549135 2229 - 0.410947
purL LBA1555 phosphoribosylpyrophosphate amidotransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS1547711 1467 - 0.421268
purM LBA1554 phosphoribosylformylglycinamide cyclo-ligaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS1546671 1038 - 0.434489
purN LBA1553 phosphoribosyl glycinamide formyltransferaseSubName: Full=Phosphoribosyl glycinamide formyltransferase; chromosome CDS1546059 603 - 0.353234
purQ LBA1557 phosphoribosylformylglycinamidine synthaseRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS1551360 672 - 0.391369
purR LBA0218 repressorSubName: Full=Repressor; chromosome CDS214093 831 + 0.365824
purS LBA1558 putative phosphoribosylformylglycinamidine (FGAM) synthaseSubName: Full=Putative phosphoribosylformylglycinamidine (FGAM) synthase; chromosome CDS1552028 255 - 0.360784
purU LBA1153 formate-tetrahydrofolate ligaseRecName: Full=Formate--tetrahydrofolate ligase 1; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase 1; Short=FHS 1; Short=FTHFS 1; chromosome CDS1128562 1677 - 0.349434
pyrB LBA1382 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS1361752 957 - 0.366771
pyrC LBA1381 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1360475 1278 - 0.394366
pyrD LBA1384 dihydroorotate dehydrogenase B, catalytic unitRecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD A; Short=DHODase A; Short=DHOdehase A; EC=1.3.98.1; chromosome CDS1363568 924 - 0.392857
pyrE LBA1387 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS1365451 639 + 0.377152
pyrF LBA1386 orotidine-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS1364744 708 + 0.405367
pyrR LBA1383 uracil phosphoribosyltransferaseRecName: Full=Bifunctional protein PyrR; chromosome CDS1362849 543 - 0.39779
pyrR LBA0563 pyrimidine operon regulator proteinRecName: Full=Bifunctional protein PyrR; chromosome CDS549271 531 - 0.40113
thyA LBA0901 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS875752 957 + 0.344828
yfkN LBA0953 2',3'-cyclic-nucleotide 2'-phosphodiesteraseSubName: Full=2,3-cyclic-nucleotide 2-phosphodiesterase; chromosome CDS927399 1557 + 0.351959