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2024-06-02 10:37:30

Gene list

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COG category: Nucleotide transport and metabolism
Genomic element: chromosome

Number of genes found: 85

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Bacillus subtilis phage PBSX
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BL03229 Histidine triad containing proteinSubName: Full=Histidine triad containing protein; SubName: Full=Uncharacterized protein; chromosome CDS1952959 429 + 0.317016
NA BL03601 putative ribonucleaseSubName: Full=Putative ribonuclease; SubName: Full=Ribonuclease; EC=3.1.27.-; chromosome CDS3546804 456 + 0.47807
NA BL05395 putative PhosphohydrolaseSubName: Full=NUDIX hydrolase family protein; SubName: Full=Putative Phosphohydrolase; chromosome CDS4187710 411 - 0.481752
NA BL03688 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2601440 336 - 0.345238
NA BL01370 Formate tetrahydrofolate ligaseRecName: Full=Formate--tetrahydrofolate ligase; EC=6.3.4.3; AltName: Full=Formyltetrahydrofolate synthetase; Short=FHS; Short=FTHFS; chromosome CDS2276773 1686 - 0.507117
NA BL02102 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase 1; Short=DERA 1; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 1; AltName: Full=Phosphodeoxyriboaldolase 1; Short=Deoxyriboaldolase 1; chromosome CDS2628133 672 - 0.511905
NA BL02468 hypothetical proteinSubName: Full=Anaerobic ribonucleoside-triphosphate reductase large subunit NrdD; EC=1.17.4.2; SubName: Full=Uncharacterized protein; chromosome CDS3649808 1869 - 0.468165
NA BL00578 putative deaminaseSubName: Full=Putative cytidine deaminase; SubName: Full=Putative deaminase; chromosome CDS2207871 402 - 0.470149
NA BL01390 hypothetical proteinSubName: Full=Putative metal-dependent hydrolase; SubName: Full=Uncharacterized protein; chromosome CDS2190058 1350 - 0.5
NA BL02627 conserved hypothetical proteinSubName: Full=Putative inosine-uridine preferring nucleoside hydrolase; chromosome CDS745885 954 - 0.523061
NA BL03110 5'-Nucleotidase, N-terminal,5'-Nucleotidase, N-terminal chromosome CDS831845 4272 - 0.497425
NA BL03026 hypothetical protein, putative hydrolaseSubName: Full=Putative NUDIX hydrolase; SubName: Full=Uncharacterized protein; chromosome CDS888323 612 + 0.470588
adaA BL05281 methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) chromosome CDS2721866 411 + 0.50365
adeC BL01613 adenine deaminaseRecName: Full=Adenine deaminase; Short=Adenase; Short=Adenine aminase; EC=3.5.4.2; chromosome CDS1624815 1722 + 0.501161
adk BL01030 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS143982 654 + 0.446483
apt BL01126 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS2777513 513 - 0.475634
carA BL03245 carbamoyl-phosphate transferase-arginine (subunit A)RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS1220010 1065 + 0.513615
carB BL03246 carbamoyl-phosphate transferase-arginine (subunit B)RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS1221067 3090 + 0.511974
cdd BL03673 cytidine/deoxycytidine deaminaseSubName: Full=Cytidine deaminase Cdd; EC=3.5.4.5; SubName: Full=Cytidine/deoxycytidine deaminase; chromosome CDS2617301 411 - 0.472019
cmk BL02219 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS2365865 681 - 0.491924
comEB BL02086 ComEBSubName: Full=ComEB; SubName: Full=Cytidine deaminase ComEB; EC=3.5.4.12; chromosome CDS2647254 570 - 0.464912
dck BL02366 deoxyadenosine/deoxycytidine kinaseSubName: Full=Deoxyadenosine/deoxycytidine kinase; SubName: Full=Deoxyadenosine/deoxycytidine kinase Dck; EC=2.7.1.74; EC=2.7.1.76; chromosome CDS26774 642 - 0.434579
deoC BL00229 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase 2; Short=DERA 2; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 2; AltName: Full=Phosphodeoxyriboaldolase 2; Short=Deoxyriboaldolase 2; chromosome CDS4064536 672 - 0.50744
deoD BL01437 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type; Short=PNP; EC=2.4.2.1; chromosome CDS2240769 699 - 0.482117
dgk BL02367 deoxyguanosine kinaseSubName: Full=Deoxyguanosine kinase; SubName: Full=Deoxyguanosine kinase Dgk; EC=2.7.1.113; chromosome CDS27412 624 - 0.410256
gmk BL02293 guanylate kinase chromosome CDS1746742 639 + 0.482003
guaA BL00920 GMP synthetaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS691267 1542 + 0.481842
guaC BL05105 GMP reductaseRecName: Full=GMP reductase; EC=1.7.1.7; AltName: Full=Guanosine 5-monophosphate oxidoreductase; Short=Guanosine monophosphate reductase; chromosome CDS1211719 981 - 0.470948
guaD BL03735 guanine deaminaseSubName: Full=Guanine deaminase; SubName: Full=Guanine deaminase GuaD; EC=3.5.4.3; chromosome CDS1412477 471 - 0.47983
hit BL01103 cell-cycle regulation protein-HitSubName: Full=Cell-cycle regulation protein-Hit; SubName: Full=Histidine triad domain protein Hit; chromosome CDS1080746 420 - 0.445238
hprT BL05003 hypoxanthine-guanine phosphoribosyltransferaseSubName: Full=Hypoxanthine-guanine phosphoribosyltransferase; SubName: Full=Hypoxanthine-guanine phosphoribosyltransferase HprT; EC=2.4.2.8; chromosome CDS81137 540 + 0.442593
mtn BL02020 methylthioadenosine nucleosidaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome CDS2744096 696 - 0.478448
ndk BL02781 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS2351119 447 - 0.458613
nrdE BL01192 ribonucleoside-diphosphate reductase (major subunit)RecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS1920185 2103 + 0.446981
nrdF BL01193 ribonucleoside-diphosphate reductase (minor subunit)RecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS1922308 978 + 0.447853
nrdI BL05177 NrdIRecName: Full=Protein NrdI; chromosome CDS1919833 396 + 0.444444
nupC BL00228 pyrimidine-nucleoside transport proteinSubName: Full=Pyrimidine nucleoside transport protein NupC; SubName: Full=Pyrimidine-nucleoside transport protein; chromosome CDS4063273 1182 - 0.467851
pbuX BL00679 xanthine permeaseSubName: Full=Xanthine permease; SubName: Full=Xanthine permease PbuX; chromosome CDS2292816 1317 - 0.498861
pdp BL00227 pyrimidine-nucleoside phosphorylaseSubName: Full=Pyrimidine nucleoside phosphorylase Pdp; EC=2.4.2.2; SubName: Full=Pyrimidine-nucleoside phosphorylase; chromosome CDS4061941 1302 - 0.520737
prs BL00519 phosphoribosylpyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS62484 951 + 0.475289
pucH BL01094 allantoinaseRecName: Full=Allantoinase; EC=3.5.2.5; AltName: Full=Allantoin-utilizing enzyme; chromosome CDS1127427 1365 + 0.393407
pucIA BL00463 Permease for cytosine/purines, uracil, thiamine, allantoinSubName: Full=Cytosine permease CodB; SubName: Full=Permease for cytosine/purines, uracil, thiamine, allantoin; chromosome CDS1932001 1350 + 0.446667
punA BL00774 purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS2427875 816 - 0.509804
purA BL03156 adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS4188184 1293 - 0.49884
purB BL01478 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; SubName: Full=Adenylosuccinate lyase PurB; EC=4.3.2.2; chromosome CDS698913 1296 + 0.498457
purC BL01479 phosphoribosylaminoimidazole succinocarboxamide synthetaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS700283 717 + 0.451883
purD BL01487 phosphoribosylglycinamide synthetaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS708850 1269 + 0.530339
purE BL01476 phosphoribosylaminoimidazole carboxylase IRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS697293 489 + 0.529652
purF BL01483 glutamine phosphoribosylpyrophosphate amidotransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS704123 1431 + 0.514326
purH BL01486 phosphoribosylaminoimidazole carboxy formyl formyltransferase and inosine-monophosphate cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; chromosome CDS707298 1539 + 0.508772
purK BL01477 phosphoribosylaminoimidazole carboxylase IISubName: Full=Phosphoribosylaminoimidazole carboxylase II; chromosome CDS697774 1143 + 0.52231
purL BL01482 phosphoribosylformylglycinamidine synthetase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS701919 2229 + 0.52131
purM BL01484 phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome CDS705677 1041 + 0.523535
purN BL01485 phosphoribosylglycinamide formyltransferaseSubName: Full=Phosphoribosylglycinamide formyltransferase; SubName: Full=Phosphoribosylglycinamide formyltransferase PurN; EC=2.1.2.2; chromosome CDS706714 588 + 0.5
purQ BL01481 phosphoribosylformylglycinamidine synthetase IRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS701252 684 + 0.482456
purR BL00523 transcriptional regulatorSubName: Full=Purine operon repressor PurR; SubName: Full=Transcriptional regulator; chromosome CDS59087 834 + 0.460432
purS BL01480 PurSSubName: Full=Phosphoribosylformylglycinamidine synthase subunit PurS; EC=6.3.5.3; SubName: Full=PurS; chromosome CDS701001 255 + 0.462745
purU BL03753 Formyltetrahydrofolate deformylaseSubName: Full=Formyltetrahydrofolate deformylase; SubName: Full=Formyltetrahydrofolate deformylase YkkE; EC=3.5.1.10; chromosome CDS1406512 903 + 0.464009
pyrAA BL02275 carbamoyl-phosphate synthetase (glutaminase subunit)RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS1727258 1095 + 0.484018
pyrAB BL02276 carbamoyl-phosphate synthetase (catalytic subunit)RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS1728337 3213 + 0.514472
pyrB BL02273 aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS1725071 921 + 0.489685
pyrC BL02274 dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS1725975 1287 + 0.521368
pyrD BL02278 dihydroorotate dehydrogenase (catalytic subunit)RecName: Full=Dihydroorotate dehydrogenase; Short=DHOD; Short=DHODase; Short=DHOdehase; EC=1.3.-.-; chromosome CDS1732316 936 + 0.547009
pyrE BL02280 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS1733936 630 + 0.531746
pyrF BL02279 orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome CDS1733220 720 + 0.536111
pyrG BL03966 CTP synthetase chromosome CDS3787310 1512 - 0.48082
pyrH BL01242 uridylate kinase chromosome CDS1824245 723 + 0.485477
pyrP BL02272 uracil permeaseSubName: Full=Uracil permease; SubName: Full=Uracil permease PyrP; chromosome CDS1723623 1305 + 0.524138
pyrR BL02271 transcriptional attenuator and uracil phosphoribosyltransferase activity (minor)RecName: Full=Bifunctional protein PyrR; chromosome CDS1722872 549 + 0.520947
spoIIP BL02090 SpoIIP chromosome CDS2640471 1206 - 0.475954
tdk BL03975 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome CDS3778854 585 - 0.51453
thyA BL02642 thymidylate synthase ARecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS1974107 840 + 0.441667
tmk BL02509 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS43627 639 + 0.450704
udk BL02025 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome CDS2749162 636 - 0.454403
upp BL03992 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS3759176 630 - 0.480952
xpt BL00680 xanthine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; Short=XPRTase; EC=2.4.2.22; chromosome CDS2294129 585 - 0.473504
yaaJ BL02356 putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ chromosome CDS30002 591 + 0.49577
ybbM BL02700 conserved hypothetical YbbMRecName: Full=Anti-sigma-W factor RsiW; chromosome CDS178887 621 + 0.47343
yerA BL01492 putative Metallo-dependent hydrolaseSubName: Full=Putative Metallo-dependent hydrolase; SubName: Full=Putative adenine deaminase YerA; EC=3.5.4.2; chromosome CDS714204 1740 + 0.455172
ysnA BL00311 conserved protein YsnARecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS2866034 591 - 0.502538
ytoQ BL00073 Nucleoside 2-deoxyribosyltransferase YtoQSubName: Full=Nucleoside 2-deoxyribosyltransferase YtoQ; SubName: Full=YtoQ; chromosome CDS3018255 447 + 0.440716
yunD BL02148 putative nucleotidase YunDSubName: Full=Putative nucleotidase YunD; SubName: Full=Putative phosphoesterase YunD; EC=3.1.3.-; chromosome CDS3271852 1356 - 0.503687
yutK BL03151 putative nucleoside uptake transporter YutKSubName: Full=Nucleoside transporter YutK; SubName: Full=Putative nucleoside uptake transporter YutK; chromosome CDS3248771 1218 - 0.481117
ywdJ BL03897 putative transporter YwdJSubName: Full=Putative purine/xanthine permease YwdJ; SubName: Full=Putative transporter YwdJ; chromosome CDS3831872 1302 - 0.501536
yxjA BL01938 Concentrative nucleoside transporterSubName: Full=Concentrative nucleoside transporter; SubName: Full=Purine nucleoside transport protein NupG; chromosome CDS4024446 1194 + 0.449749