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2024-06-09 00:40:25

Gene list

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COG category: Nucleotide transport and metabolism
Genomic element: chromosome I

Number of genes found: 71

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VV0083 adenylate cyclaseSubName: Full=Adenylate cyclase; chromosome I CDS93951 2535 + 0.490335
VV0140 integraseSubName: Full=Integrase; chromosome I CDS150095 207 + 0.386473
VV0238 xanthine/uracil permease family proteinSubName: Full=Xanthine/uracil permease family protein; chromosome I CDS245550 1404 - 0.527778
VV0243 guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome I CDS252786 624 - 0.466346
VV0280 orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome I CDS291084 642 + 0.493769
VV0409 2`,3`-cyclic-nucleotide 2`-phosphodiesteraseSubName: Full=2`,3`-cyclic-nucleotide 2`-phosphodiesterase; chromosome I CDS402226 1974 - 0.480243
VV0514 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS502683 636 + 0.45283
VV0527 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase 1; Short=DERA 1; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 1; AltName: Full=Phosphodeoxyriboaldolase 1; Short=Deoxyriboaldolase 1; chromosome I CDS510225 660 - 0.421212
VV0624 carbamoylphosphate synthase small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome I CDS611941 1140 + 0.475439
VV0625 carbamoylphosphate synthase large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome I CDS613097 3234 + 0.501546
VV0635 nucleoside phosphorylaseRecName: Full=5-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Short=MTA/SAH nucleosidase; Short=MTAN; EC=3.2.2.9; AltName: Full=5-methylthioadenosine nucleosidase; Short=MTA nucleosidase; AltName: Full=S-adenosylhomocysteine nucleosidase; Short=AdoHcy nucleosidase; Short=SAH nucleosidase; Short=SRH nucleosidase; chromosome I CDS622058 696 - 0.45977
VV0679 thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome I CDS676928 852 + 0.474178
VV0726 exopolyphosphataseSubName: Full=Exopolyphosphatase; chromosome I CDS729833 1500 - 0.468667
VV0763 nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome I CDS767295 426 + 0.471831
VV0776 GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome I CDS782082 1554 + 0.470399
VV0843 cytosine/adenosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome I CDS846833 546 + 0.498168
VV0847 phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domainRecName: Full=Phosphoribosylformylglycinamidine synthase; Short=FGAM synthase; Short=FGAMS; EC=6.3.5.3; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; chromosome I CDS849550 4056 + 0.501233
VV0855 xanthine-guanine phosphoribosyltransferaseRecName: Full=Xanthine phosphoribosyltransferase; EC=2.4.2.22; AltName: Full=Xanthine-guanine phosphoribosyltransferase; Short=XGPRT; chromosome I CDS860631 465 + 0.475269
VV0882 DNA/RNA endonuclease GSubName: Full=DNA/RNA endonuclease G; chromosome I CDS882718 750 - 0.501333
VV0926 phosphoribosylpyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; chromosome I CDS927453 945 - 0.488889
VV0936 5'-nucleotidase precursorSubName: Full=5-nucleotidase; chromosome I CDS935821 1695 + 0.477286
VV1002 adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome I CDS997760 645 + 0.458915
VV1043 histidine triad family proteinSubName: Full=Histidine triad family protein; chromosome I CDS1046427 459 - 0.481481
VV1046 formyltetrahydrofolate hydrolaseSubName: Full=Formyltetrahydrofolate hydrolase; chromosome I CDS1049645 912 - 0.434211
VV1061 nucleoside permeaseSubName: Full=Nucleoside permease; chromosome I CDS1062936 1200 + 0.490833
VV1112 dGTP triphosphohydrolaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome I CDS1119120 1332 - 0.49024
VV1243 ribonucleotide reductase, beta subunitSubName: Full=Ribonucleotide reductase, beta subunit; chromosome I CDS1259605 1134 - 0.451499
VV1244 ribonucleotide reductase, alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome I CDS1260819 2304 - 0.474826
VV1261 uridine kinaseRecName: Full=Uridine kinase; EC=2.7.1.48; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase; chromosome I CDS1280613 651 + 0.450077
VV1280 thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome I CDS1300236 639 + 0.482003
VV1299 cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome I CDS1320901 693 + 0.480519
VV1304 orotidine-5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; chromosome I CDS1325580 699 + 0.463519
VV1316 tRNA-(MS[2]IO[6]A)-hydroxylaseSubName: Full=tRNA-(MS[2]IO[6]A)-hydroxylase; chromosome I CDS1341829 774 - 0.440568
VV1341 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome I CDS1367497 1371 - 0.468271
VV1363 thymidine kinaseRecName: Full=Thymidine kinase; EC=2.7.1.21; chromosome I CDS1388101 579 + 0.447323
VV1468 phosphoribosylaminoimidazolesuccinocarboxamidesynthaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome I CDS1505447 1104 - 0.461957
VV1654 dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome I CDS1708183 1011 + 0.440158
VV1768 diadenosine tetraphosphate hydrolaseSubName: Full=Diadenosine tetraphosphate hydrolase; chromosome I CDS1814142 417 - 0.40048
VV1929 adenylate kinaseSubName: Full=Adenylate kinase; chromosome I CDS1920581 540 - 0.401852
VV1962 cytidine deaminaseRecName: Full=Cytidine deaminase; EC=3.5.4.5; AltName: Full=Cytidine aminohydrolase; Short=CDA; chromosome I CDS1953456 909 + 0.473047
VV1963 phosphoribosylglycinamide formyltransferase 2RecName: Full=Phosphoribosylglycinamide formyltransferase 2; Short=GART 2; EC=2.1.2.-; AltName: Full=5-phosphoribosylglycinamide transformylase 2; AltName: Full=Formate-dependent GAR transformylase; AltName: Full=GAR transformylase 2; chromosome I CDS1954496 1176 + 0.486395
VV1968 ADP-ribose pyrophosphataseSubName: Full=ADP-ribose pyrophosphatase; chromosome I CDS1958893 819 - 0.466422
VV2151 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2166908 336 + 0.375
VV2192 thymidylate kinaseSubName: Full=Thymidylate kinase; chromosome I CDS2199926 621 - 0.386473
VV2243 adenylosuccinate lyaseSubName: Full=Adenylosuccinate lyase; chromosome I CDS2266108 1380 - 0.498551
VV2374 diadenosine tetraphosphate hydrolaseSubName: Full=Diadenosine tetraphosphate hydrolase; chromosome I CDS2404077 408 - 0.463235
VV2377 uridine phosphorylaseRecName: Full=Uridine phosphorylase; EC=2.4.2.3; chromosome I CDS2408093 759 - 0.496706
VV2412 adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome I CDS2443091 546 - 0.479853
VV2419 glutamine phosphoribosylpyrophosphate amidotransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome I CDS2447026 1515 - 0.468647
VV2513 uracil permeaseSubName: Full=Uracil permease; chromosome I CDS2543179 1254 + 0.484848
VV2514 uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome I CDS2544559 642 - 0.450156
VV2515 phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; AltName: Full=AIR synthase; AltName: Full=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; chromosome I CDS2545364 1041 + 0.487992
VV2516 folate-dependent phosphoribosylglycinamide formyltransferase PurNSubName: Full=Folate-dependent phosphoribosylglycinamide formyltransferase PurN; chromosome I CDS2546508 675 + 0.494815
VV2555 uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome I CDS2584382 735 - 0.484354
VV2676 purine-nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase DeoD-type 1; Short=PNP 1; EC=2.4.2.1; chromosome I CDS2713690 765 - 0.461438
VV2678 thymidine phosphorylaseRecName: Full=Thymidine phosphorylase; EC=2.4.2.4; AltName: Full=TdRPase; chromosome I CDS2715765 1356 - 0.500737
VV2679 deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase 2; Short=DERA 2; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase 2; AltName: Full=Phosphodeoxyriboaldolase 2; Short=Deoxyriboaldolase 2; chromosome I CDS2717182 777 - 0.472329
VV2680 nucleoside permeaseSubName: Full=Nucleoside permease; chromosome I CDS2718517 1263 - 0.463183
VV2769 hypoxanthine-guanine phosphoribosyltransferaseSubName: Full=Hypoxanthine-guanine phosphoribosyltransferase; chromosome I CDS2822691 531 - 0.427495
VV2819 CTP synthaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome I CDS2875507 1785 - 0.463866
VV2879 xanthosine triphosphate pyrophosphataseRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome I CDS2930985 681 + 0.481645
VV2920 aspartate carbamoyltransferase, catalytic chainRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome I CDS2979830 930 + 0.501075
VV2921 aspartate carbamoyltransferase, regulatory subunitRecName: Full=Aspartate carbamoyltransferase regulatory chain; chromosome I CDS2980774 462 + 0.448052
VV2968 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS3047940 267 - 0.490637
VV3062 cytosine deaminaseSubName: Full=Cytosine deaminase; chromosome I CDS3143191 1497 + 0.493654
VV3066 adenylosuccinate synthaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome I CDS3147482 1317 - 0.464692
VV3142 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; Includes: RecName: Full=Phosphoribosylaminoimidazolecarboxamide formyltransferase; EC=2.1.2.3; AltName: Full=AICAR transformylase; Includes: RecName: Full=IMP cyclohydrolase; EC=3.5.4.10; AltName: Full=ATIC; AltName: Full=IMP synthase; AltName: Full=Inosinicase; chromosome I CDS3225592 1593 + 0.518519
VV3143 phosphoribosylamine-glycine ligaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome I CDS3227197 1335 + 0.532584
VV3184 guanosine-5'-triphosphate,3'-diphosphatepyrophos phataseRecName: Full=Guanosine-5-triphosphate,3-diphosphate pyrophosphatase; EC=3.6.1.40; AltName: Full=Guanosine pentaphosphate phosphohydrolase; AltName: Full=pppGpp-5-phosphohydrolase; chromosome I CDS3272018 1572 + 0.51145
VV3218 phosphoribosylaminoimidazole carboxylase, catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide mutase; chromosome I CDS3308927 486 + 0.512346
VV3219 phosphoribosylaminoimidazole carboxylase, ATPase subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide synthase; Short=N5-CAIR synthase; EC=6.3.4.18; AltName: Full=5-(carboxyamino)imidazole ribonucleotide synthetase; chromosome I CDS3309416 1134 + 0.479718