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2024-06-10 19:49:16

Gene list

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COG category: Nucleotide transport and metabolism
Genomic element: chromosome

Number of genes found: 81

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Nocardia farcinica IFM 10152, IFM 10152
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA nfa5530 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS568789 426 - 0.683099
NA nfa13470 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1509128 954 - 0.721174
NA nfa2380 putative cytidine/deoxycytidylate deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS247724 480 + 0.758333
NA nfa9320 putative guanyl-specific ribonucleaseSubName: Full=Putative guanyl-specific ribonuclease; chromosome CDS1035387 459 + 0.721133
NA nfa23760 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2537142 477 - 0.633124
NA nfa37110 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3925089 573 - 0.680628
NA nfa25490 putative nucleoside hydrolaseSubName: Full=Putative nucleoside hydrolase; chromosome CDS2717040 1068 - 0.719101
NA nfa51810 putative phosphataseSubName: Full=Putative phosphatase; chromosome CDS5479972 1032 - 0.70155
NA nfa49830 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5197682 789 + 0.66033
NA nfa52370 putative allantoicaseRecName: Full=Probable allantoicase; EC=3.5.3.4; AltName: Full=Allantoate amidinohydrolase; chromosome CDS5535275 990 - 0.735354
NA nfa44190 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4582208 876 - 0.652968
NA nfa8960 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS997838 1326 + 0.710407
NA nfa52410 putative hydrolaseSubName: Full=Putative hydrolase; chromosome CDS5541327 1359 - 0.752024
NA nfa34960 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3707749 1275 - 0.690196
NA nfa44200 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4583198 717 + 0.647141
NA nfa18360 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2007050 666 - 0.714715
NA nfa5600 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS575538 603 + 0.723051
NA nfa9530 putative adenosine deaminaseRecName: Full=Adenosine deaminase; EC=3.5.4.4; AltName: Full=Adenosine aminohydrolase; chromosome CDS1054190 1098 + 0.699454
NA nfa4540 putative MutT family proteinSubName: Full=Putative MutT family protein; chromosome CDS470887 456 + 0.725877
NA nfa42400 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4389660 465 - 0.744086
NA nfa55650 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5897477 2880 - 0.727778
NA nfa7440 putative MutT family proteinSubName: Full=Putative MutT family protein; chromosome CDS800338 483 - 0.654244
NA nfa10120 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1115345 453 - 0.719647
NA nfa36220 putative dihydroorotaseRecName: Full=Dihydroorotase; Short=DHOase; EC=3.5.2.3; chromosome CDS3835067 1314 - 0.722222
NA nfa10960 hypothetical proteinRecName: Full=Non-canonical purine NTP pyrophosphatase; EC=3.6.1.19; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase; chromosome CDS1211754 621 + 0.748792
NA nfa9610 putative purine nucleoside phosphorylaseRecName: Full=Purine nucleoside phosphorylase; EC=2.4.2.1; AltName: Full=Inosine-guanosine phosphorylase; chromosome CDS1061149 804 - 0.745025
NA nfa5670 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS584079 237 + 0.666667
NA nfa34640 putative MutT family proteinSubName: Full=Putative MutT family protein; chromosome CDS3672188 474 + 0.597046
NA nfa16930 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1845666 519 + 0.743738
NA nfa44690 putative deaminaseSubName: Full=Putative deaminase; chromosome CDS4636400 510 + 0.747059
NA nfa9500 putative cytidine deaminaseSubName: Full=Putative cytidine deaminase; chromosome CDS1051749 402 + 0.664179
NA nfa30050 putative cytidine/deoxycytidylate deaminaseSubName: Full=Putative cytidine/deoxycytidylate deaminase; chromosome CDS3186265 609 + 0.748768
NA nfa12330 putative transporterSubName: Full=Putative transporter; chromosome CDS1370486 1467 + 0.664622
NA nfa49420 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5163204 684 + 0.643275
NA nfa8440 putative methylthioadenosine phosphorylaseRecName: Full=S-methyl-5-thioadenosine phosphorylase; EC=2.4.2.28; AltName: Full=5-methylthioadenosine phosphorylase; chromosome CDS935791 810 + 0.703704
NA nfa14630 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1643928 357 + 0.691877
NA nfa8600 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS957553 1212 - 0.710396
NA nfa39060 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4111856 852 - 0.607981
NA nfa49460 putative MutT family proteinSubName: Full=Putative MutT family protein; chromosome CDS5166421 468 - 0.638889
adk nfa7950 putative adenylate kinaseRecName: Full=Adenylate kinase; Short=AK; EC=2.7.4.3; AltName: Full=ATP-AMP transphosphorylase; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase; chromosome CDS859767 546 + 0.690476
apt nfa36880 putative adenine phosphoribosyltransferaseRecName: Full=Adenine phosphoribosyltransferase; Short=APRT; EC=2.4.2.7; chromosome CDS3905980 576 - 0.743056
carA nfa36200 putative carbamoyl-phosphate synthase small subunitRecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; chromosome CDS3833455 1119 - 0.705094
carB nfa36190 putative carbamoyl-phosphate synthase large subunitRecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; chromosome CDS3830123 3333 - 0.70147
cmk nfa20120 putative cytidylate kinaseRecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.25; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS2188914 738 + 0.728997
dcd nfa54290 putative 2'-deoxycytidine 5'-triphosphate deaminaseRecName: Full=Deoxycytidine triphosphate deaminase; Short=dCTP deaminase; EC=3.5.4.13; chromosome CDS5747984 600 - 0.681667
deoA nfa9510 putative thymidine phosphorylaseSubName: Full=Putative thymidine phosphorylase; chromosome CDS1052167 1284 + 0.746106
deoC nfa52030 putative deoxyribose-phosphate aldolaseRecName: Full=Deoxyribose-phosphate aldolase; Short=DERA; EC=4.1.2.4; AltName: Full=2-deoxy-D-ribose 5-phosphate aldolase; AltName: Full=Phosphodeoxyriboaldolase; Short=Deoxyriboaldolase; chromosome CDS5499193 669 - 0.729447
dgt nfa14690 putative dGTPaseRecName: Full=Deoxyguanosinetriphosphate triphosphohydrolase-like protein; chromosome CDS1649906 1260 + 0.72619
dut nfa37530 putative deoxyuridinetriphosphataseRecName: Full=Deoxyuridine 5-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; chromosome CDS3971937 498 - 0.736948
gmk nfa36160 putative guanylate kinaseRecName: Full=Guanylate kinase; EC=2.7.4.8; AltName: Full=GMP kinase; chromosome CDS3827778 582 - 0.685567
gppA nfa48560 putative exopolyphosphataseSubName: Full=Putative exopolyphosphatase; chromosome CDS5068649 948 - 0.724684
guaA nfa8970 putative GMP synthaseRecName: Full=GMP synthase [glutamine-hydrolyzing]; EC=6.3.5.2; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase; chromosome CDS999226 1575 + 0.705397
hpt nfa3890 putative hypoxanthine phosphoribosyltransferaseSubName: Full=Putative hypoxanthine phosphoribosyltransferase; chromosome CDS404836 558 + 0.655914
ndk nfa13510 putative nucleoside diphosphate kinaseRecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase; EC=2.7.4.6; AltName: Full=Nucleoside-2-P kinase; chromosome CDS1514961 420 + 0.692857
nrdE nfa43070 putative ribonucleoside-diphosphate reductase alpha subunitRecName: Full=Ribonucleoside-diphosphate reductase; EC=1.17.4.1; chromosome CDS4464381 3309 - 0.636748
nrdF nfa42980 putative ribonucleoside-diphosphate reductase beta subunitRecName: Full=Ribonucleoside-diphosphate reductase subunit beta; EC=1.17.4.1; chromosome CDS4452892 963 - 0.630322
nrdI nfa43080 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4467755 510 - 0.666667
prsA nfa48790 putative phosphoribosyl pyrophosphate synthetaseRecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; chromosome CDS5093976 981 + 0.678899
purA nfa53730 putative adenylosuccinate synthetaseRecName: Full=Adenylosuccinate synthetase; Short=AMPSase; Short=AdSS; EC=6.3.4.4; AltName: Full=IMP--aspartate ligase; chromosome CDS5677992 1290 - 0.681395
purB nfa5590 putative adenylosuccinate lyaseSubName: Full=Putative adenylosuccinate lyase; chromosome CDS574112 1422 + 0.713783
purC nfa13190 putativephosphoribosylaminoimidazole-succinocarboxamidesynthetaseRecName: Full=Phosphoribosylaminoimidazole-succinocarboxamide synthase; EC=6.3.2.6; AltName: Full=SAICAR synthetase; chromosome CDS1476295 891 + 0.69697
purD nfa5550 putative phosphoribosylglycinamide synthetaseRecName: Full=Phosphoribosylamine--glycine ligase; EC=6.3.4.13; AltName: Full=GARS; AltName: Full=Glycinamide ribonucleotide synthetase; AltName: Full=Phosphoribosylglycinamide synthetase; chromosome CDS569854 1272 + 0.737421
purE nfa10010 putative phosphoribosylaminoimidazole carboxylase catalytic subunitRecName: Full=N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase; EC=5.4.99.18; chromosome CDS1107377 507 + 0.725838
purF nfa5790 putative phosphoribosylpyrophosphate amidotransferaseRecName: Full=Amidophosphoribosyltransferase; Short=ATase; EC=2.4.2.14; AltName: Full=Glutamine phosphoribosylpyrophosphate amidotransferase; chromosome CDS597546 1500 + 0.704667
purHJ nfa49860 putative phosphoribosylaminoimidazole carboxy formyl formyltransferase/inosine-monophosphate cyclohydrolaseRecName: Full=Bifunctional purine biosynthesis protein PurH; chromosome CDS5199831 1572 - 0.715649
purK nfa10000 putative phosphoribosylaminoimidazole carboxylase ATPase subunitSubName: Full=Putative phosphoribosylaminoimidazole carboxylase ATPase subunit; chromosome CDS1106155 1221 + 0.714988
purL nfa5730 putative phosphoribosylformylglycinamidine synthase IIRecName: Full=Phosphoribosylformylglycinamidine synthase 2; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase II; Short=FGAM synthase II; chromosome CDS589940 2295 + 0.708932
purM nfa5800 putative phosphoribosylaminoimidazole synthetaseRecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase; EC=6.3.3.1; chromosome CDS599137 1077 + 0.706592
purN nfa49870 putative phosphoribosylglycinamide formyltransferaseSubName: Full=Putative phosphoribosylglycinamide formyltransferase; chromosome CDS5201399 648 - 0.71142
purQ nfa5680 putative phosphoribosylformylglycinamidine synthase IRecName: Full=Phosphoribosylformylglycinamidine synthase 1; EC=6.3.5.3; AltName: Full=Phosphoribosylformylglycinamidine synthase I; Short=FGAM synthase I; chromosome CDS584312 678 + 0.725664
purU nfa52050 putative formyltetrahydrofolate deformylaseSubName: Full=Putative formyltetrahydrofolate deformylase; chromosome CDS5500626 891 + 0.704826
pyrB nfa36230 putative aspartate carbamoyltransferaseRecName: Full=Aspartate carbamoyltransferase; EC=2.1.3.2; AltName: Full=Aspartate transcarbamylase; Short=ATCase; chromosome CDS3836412 960 - 0.713542
pyrD nfa29160 putative dihydroorotate dehydrogenaseRecName: Full=Dihydroorotate dehydrogenase (quinone); EC=1.3.5.2; AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase; chromosome CDS3099486 1110 - 0.736036
pyrE nfa53980 putative orotate phosphoribosyltransferaseRecName: Full=Orotate phosphoribosyltransferase; Short=OPRT; Short=OPRTase; EC=2.4.2.10; chromosome CDS5701335 573 - 0.717277
pyrF nfa36180 putative orotidine 5'-phosphate decarboxylaseRecName: Full=Orotidine 5-phosphate decarboxylase; EC=4.1.1.23; AltName: Full=OMP decarboxylase; chromosome CDS3829281 846 - 0.738771
pyrG nfa20050 putative CTP synthetaseRecName: Full=CTP synthase; EC=6.3.4.2; AltName: Full=CTP synthetase; AltName: Full=UTP--ammonia ligase; chromosome CDS2181595 1722 + 0.684088
pyrH nfa41290 putative uridylate kinaseRecName: Full=Uridylate kinase; Short=UK; EC=2.7.4.22; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase; Short=UMPK; chromosome CDS4276938 729 - 0.646091
pyrR nfa36240 putative pyrimidine operon regulatorRecName: Full=Bifunctional protein PyrR; chromosome CDS3837375 627 - 0.717703
thyA nfa50220 putative thymidylate synthaseRecName: Full=Thymidylate synthase; Short=TS; Short=TSase; EC=2.1.1.45; chromosome CDS5236624 801 + 0.670412
tmk nfa46120 putative thymidylate kinaseRecName: Full=Thymidylate kinase; EC=2.7.4.9; AltName: Full=dTMP kinase; chromosome CDS4800373 648 - 0.734568
upp nfa9590 putative uracil phosphoribosyltransferaseRecName: Full=Uracil phosphoribosyltransferase; EC=2.4.2.9; AltName: Full=UMP pyrophosphorylase; AltName: Full=UPRTase; chromosome CDS1058879 624 + 0.719551