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2024-06-16 14:37:10

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome II

Number of genes found: 58

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Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0317 putative manganese binding agmatinase (SpeB)SubName: Full=Putative manganese binding agmatinase (SpeB); EC=3.5.3.11; chromosome II CDS367765 1110 + 0.434234
NA PSHAb0428 putative acetylornithine transaminaseRecName: Full=Acetylornithine aminotransferase; Short=ACOAT; EC=2.6.1.11; chromosome II CDS487681 1206 - 0.42869
NA PSHAb0097 putative enzyme proteinSubName: Full=Putative enzyme protein; chromosome II CDS115021 1668 - 0.394484
NA PSHAb0238 conserved protein of unknown functionSubName: Full=Putative uncharacterized protein; chromosome II CDS281958 2469 + 0.432159
NA PSHAb0235 putative enzymeSubName: Full=Putative enzyme; chromosome II CDS276521 2049 - 0.41386
NA PSHAb0005 Dipeptidyl-peptidase IVSubName: Full=Dipeptidyl-peptidase IV; EC=3.4.14.5; chromosome II CDS8452 2334 + 0.421165
NA PSHAb0183 putative transporterSubName: Full=Putative transporter; chromosome II CDS221736 1227 + 0.405868
NA PSHAb0303 putative S-C lyaseSubName: Full=Putative S-C lyase; chromosome II CDS354560 387 - 0.390181
NA PSHAb0401 Histidine ammonia-lyase (hutT-like)SubName: Full=Histidine ammonia-lyase (HutT-like); EC=4.3.1.3; chromosome II CDS457180 1545 + 0.43754
NA PSHAb0190 conserved protein of unknown functionSubName: Full=Putative uncharacterized protein; chromosome II CDS228130 624 + 0.371795
NA PSHAb0034 putative spermine/spermidine synthase proteinSubName: Full=Putative spermine/spermidine synthase protein; EC=2.5.1.16; chromosome II CDS39191 909 + 0.360836
NA PSHAb0246 putative orphan proteinSubName: Full=Putative orphan protein; chromosome II CDS290503 183 + 0.344262
NA PSHAb0042 putative membrane proteinSubName: Full=Putative membrane protein; chromosome II CDS49385 354 + 0.358757
NA PSHAb0160 conserved protein of unknown function ; putative integral inner membrane sodium-dependent carbohydrate transporter proteinSubName: Full=Putative uncharacterized protein; chromosome II CDS197519 2604 - 0.43126
NA PSHAb0151 putative sodium-dependent carbohydrate permeaseSubName: Full=Putative sodium-dependent carbohydrate permease; chromosome II CDS185547 2439 - 0.374334
NA PSHAb0239 putative orphan proteinSubName: Full=Putative orphan protein; chromosome II CDS284490 219 + 0.452055
NA PSHAb0465 probable isopropylmalate dehydrogenaseSubName: Full=Probable isopropylmalate dehydrogenase; EC=1.1.1.85; chromosome II CDS523204 1008 - 0.418651
NA PSHAb0214 putative transport proteinSubName: Full=Putative transport protein; chromosome II CDS251834 876 + 0.389269
NA PSHAb0023 putative membrane proteinSubName: Full=Putative membrane protein; chromosome II CDS29277 1518 - 0.453228
NA PSHAb0115 putative enzyme proteinSubName: Full=Putative enzyme protein; chromosome II CDS140003 384 - 0.455729
NA PSHAb0051 putative amino acid efflux proteinSubName: Full=Putative amino acid efflux protein; chromosome II CDS56000 645 - 0.384496
NA PSHAb0057 putative Zn-dependent aminopeptidaseSubName: Full=Putative Zn-dependent aminopeptidase; chromosome II CDS63742 2451 + 0.414117
NA PSHAb0215 putative metal-dependent dipeptidaseSubName: Full=Putative metal-dependent dipeptidase; EC=3.4.13.9; chromosome II CDS252792 1221 - 0.428337
NA PSHAb0063 putative peptidaseSubName: Full=Putative peptidase; chromosome II CDS73931 2019 - 0.423972
NA PSHAb0033 putative membrane proteinSubName: Full=Putative membrane protein; chromosome II CDS38578 621 + 0.407407
NA PSHAb0171 putative hydrolaseSubName: Full=Putative hydrolase; chromosome II CDS211643 1314 - 0.425419
NA PSHAb0129 putative dihydroxyacid dehydratase (ilvD-like)RecName: Full=Dihydroxy-acid dehydratase 2; Short=DAD 2; EC=4.2.1.9; chromosome II CDS159570 1680 + 0.435714
NA PSHAb0427 putative arginine succinyltransferaseSubName: Full=Putative arginine succinyltransferase; EC=2.3.1.109; chromosome II CDS486597 1035 - 0.427053
NA PSHAb0029 putative enzyme proteinSubName: Full=Putative enzyme protein; chromosome II CDS35740 501 + 0.397206
NA PSHAb0479 putative idonate or gluconate permeaseSubName: Full=Putative idonate or gluconate permease; chromosome II CDS540778 1344 - 0.425595
NA PSHAb0302 putative aminopeptidaseSubName: Full=Putative aminopeptidase; EC=3.4.11.1; chromosome II CDS353174 1362 + 0.435389
NA PSHAb0477 putative cystathionine gamma-synthase or beta-lyase, PLP-dependentSubName: Full=Putative cystathionine gamma-synthase or beta-lyase, PLP-dependent; chromosome II CDS538083 1272 + 0.430818
NA PSHAb0543 putative ornithine cyclodeaminaseSubName: Full=Putative ornithine cyclodeaminase; EC=4.3.1.12; chromosome II CDS607365 1071 + 0.434174
NA PSHAb0390 putative dihydrodipicolinate synthase (dapA-like)SubName: Full=Putative dihydrodipicolinate synthase (DapA-like); EC=4.2.1.52; chromosome II CDS450141 918 + 0.422658
NA PSHAb0360 putative permeaseSubName: Full=Putative permease; chromosome II CDS419366 282 + 0.312057
NA PSHAb0240 putative efflux proteinSubName: Full=Putative efflux protein; chromosome II CDS285152 618 + 0.435275
aroH PSHAb0559 Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphateSubName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase); EC=2.5.1.54; chromosome II CDS630071 1356 - 0.433628
asd PSHAb0528 putative aspartate-semialdehyde dehydrogenaseRecName: Full=Aspartate-semialdehyde dehydrogenase; Short=ASA dehydrogenase; Short=ASADH; EC=1.2.1.11; AltName: Full=Aspartate-beta-semialdehyde dehydrogenase; chromosome II CDS597051 1116 + 0.446237
astB PSHAb0177 putative succinylarginine dihydrolaseRecName: Full=N-succinylarginine dihydrolase; EC=3.5.3.23; chromosome II CDS217306 1347 - 0.434298
betA PSHAb0418 putative choline dehydrogenase (flavoprotein)RecName: Full=Choline dehydrogenase; EC=1.1.99.1; chromosome II CDS477680 1668 - 0.434053
betC PSHAb0261 putative choline dehydrogenaseSubName: Full=Putative choline dehydrogenase; EC=1.1.99.1; chromosome II CDS307281 1602 + 0.425718
gltB PSHAb0127 glutamate synthase, large subunit, GOGATSubName: Full=Glutamate synthase, large subunit, GOGAT; EC=1.4.1.13; chromosome II CDS153304 4608 + 0.446398
gltD PSHAb0128 glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein, GOGATSubName: Full=Glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein, GOGAT; EC=1.4.1.14; chromosome II CDS157932 1491 + 0.463447
hisA PSHAb0489 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'- phosphoribosyl)-4-imidazolecarboxamide isomeraseRecName: Full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; EC=5.3.1.16; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; chromosome II CDS553374 729 - 0.438957
hisB PSHAb0491 modular bifunctional: histidinol-phosphatase (N-terminal); imidazoleglycerol-phosphate dehydratase (C-terminal)SubName: Full=Modular bifunctional: histidinol-phosphatase (N-terminal) imidazoleglycerol-phosphate dehydratase (C-terminal); EC=3.1.3.15; EC=4.2.1.19; chromosome II CDS554723 1062 - 0.42467
hisC PSHAb0492 histidinol phosphate aminotransferaseSubName: Full=Histidinol phosphate aminotransferase; EC=2.6.1.9; chromosome II CDS555781 1110 - 0.422523
hisD PSHAb0493 bifunctional HisD: L-histidinal:NAD+ dehydrogenase ; L-histidinol:NAD+ dehydrogenaseRecName: Full=Histidinol dehydrogenase; Short=HDH; EC=1.1.1.23; chromosome II CDS556880 1302 - 0.447005
hisF PSHAb0483 imidazole glycerol phosphate synthase, subunit with HisH; may channel ammoniumRecName: Full=Imidazole glycerol phosphate synthase subunit HisF; EC=4.1.3.-; AltName: Full=IGP synthase cyclase subunit; AltName: Full=IGP synthase subunit HisF; AltName: Full=ImGP synthase subunit HisF; Short=IGPS subunit HisF; chromosome II CDS544408 774 - 0.416021
hisG PSHAb0494 ATP phosphoribosyltransferaseRecName: Full=ATP phosphoribosyltransferase; Short=ATP-PRT; Short=ATP-PRTase; EC=2.4.2.17; chromosome II CDS558187 900 - 0.43
hisH PSHAb0490 Imidazole glycerol phosphate synthase subunit hisH (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subuniSubName: Full=Imidazole glycerol phosphate synthase subunit hisH (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH); EC=2.4.2.-; chromosome II CDS554136 549 - 0.471767
hisI PSHAb0482 bifunctional: phosphoribosyl-AMP cyclohydrolase (N-terminal); phosphoribosyl-ATP pyrophosphatase (C-terminal)RecName: Full=Histidine biosynthesis bifunctional protein HisIE; chromosome II CDS543797 615 - 0.413008
ilvH PSHAb0463 acetolactate synthase isozyme III small subunitSubName: Full=Acetolactate synthase isozyme III small subunit; EC=2.2.1.6; chromosome II CDS520541 501 - 0.413174
ilvI PSHAb0464 acetolactate synthase isozyme III large subunitRecName: Full=Acetolactate synthase; EC=2.2.1.6; chromosome II CDS521041 1725 - 0.428406
iscS PSHAb0099 Cysteine desulfurase (ThiI) (transpersulfidase) (NifS protein homolog)SubName: Full=Cysteine desulfurase (ThiI) (Transpersulfidase) (NifS protein homolog); EC=2.8.1.7; chromosome II CDS117905 1128 + 0.376773
ltaE PSHAb0295 Low-specificity L-threonine aldolase (Low-specificity L-TA)SubName: Full=Low-specificity L-threonine aldolase (Low-specificity L-TA); EC=4.1.2.5; chromosome II CDS344984 1005 - 0.433831
nanA PSHAb0156 N-acetylneuraminate lyase (aldolase)SubName: Full=N-acetylneuraminate lyase (Aldolase); EC=4.1.3.3; chromosome II CDS190981 906 - 0.43819
smvA PSHAb0203 putative SmvA (YddG) efflux proteinSubName: Full=Putative SmvA (YddG) efflux protein; chromosome II CDS239070 921 + 0.388708
yaaJ PSHAb0545 putative amino acid permeaseSubName: Full=Putative amino acid permease; chromosome II CDS609456 1407 + 0.427861