Gene list
Applied filters:
COG category: Amino acid transport and metabolism
Genomic element: chromosome
Number of genes found: 57
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae) | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
argF | bbp333 | ornithine carbamoyltransferase anabolic | RecName: Full=Ornithine carbamoyltransferase; Short=OTCase; EC=2.1.3.3; | chromosome | CDS | 387894 | 1020 | + | 0.264706 |
argG | bbp048 | argininosuccinate synthase | RecName: Full=Argininosuccinate synthase; EC=6.3.4.5; AltName: Full=Citrulline--aspartate ligase; | chromosome | CDS | 53764 | 1230 | + | 0.318699 |
argH | bbp049 | argininosuccinate lyase | RecName: Full=Argininosuccinate lyase; Short=ASAL; EC=4.3.2.1; AltName: Full=Arginosuccinase; | chromosome | CDS | 55107 | 1377 | + | 0.279593 |
aroA | bbp288 | 3-phosphoshikimate 1-carboxyvinyltransferase | RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; EC=2.5.1.19; AltName: Full=5-enolpyruvylshikimate-3-phosphate synthase; Short=EPSP synthase; Short=EPSPS; | chromosome | CDS | 336665 | 1284 | - | 0.288162 |
aroB | bbp480 | 3-dehydroquinate synthase | RecName: Full=3-dehydroquinate synthase; EC=4.2.3.4; | chromosome | CDS | 540099 | 1068 | - | 0.27809 |
aroC | bbp091 | chorismate synthase | RecName: Full=Chorismate synthase; EC=4.2.3.5; AltName: Full=5-enolpyruvylshikimate-3-phosphate phospholyase; | chromosome | CDS | 101526 | 1068 | - | 0.344569 |
aroE | bbp437 | shikimate 5-dehydrogenase | RecName: Full=Shikimate dehydrogenase; EC=1.1.1.25; | chromosome | CDS | 511465 | 849 | - | 0.252061 |
aroH | bbp118 | phospho-2-dehydro-3-deoxyheptonate aldolase | RecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive; EC=2.5.1.54; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; AltName: Full=DAHP synthase; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase; | chromosome | CDS | 129441 | 1047 | + | 0.342884 |
aroK | bbp481 | shikimate kinase | RecName: Full=Shikimate kinase; Short=SK; EC=2.7.1.71; | chromosome | CDS | 541217 | 525 | - | 0.293333 |
aroQ | bbp362 | 3-dehydroquinate dehydratase | RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase; EC=4.2.1.10; AltName: Full=Type II DHQase; | chromosome | CDS | 418870 | 465 | + | 0.268817 |
asd | bbp398 | aspartate-semialdehyde dehydrogenase | RecName: Full=Aspartate-semialdehyde dehydrogenase; Short=ASA dehydrogenase; Short=ASADH; EC=1.2.1.11; AltName: Full=Aspartate-beta-semialdehyde dehydrogenase; | chromosome | CDS | 461390 | 1110 | - | 0.301802 |
carA | bbp135 | carbamoyl-phosphate synthase small chain | RecName: Full=Carbamoyl-phosphate synthase small chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase glutamine chain; | chromosome | CDS | 149829 | 1194 | - | 0.282245 |
carB | bbp134 | carbamoyl phosphate synthetase large chain | RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain; | chromosome | CDS | 146590 | 3231 | - | 0.29836 |
cysE | bbp051 | serine acetyltransferase | RecName: Full=Serine acetyltransferase; Short=SAT; EC=2.3.1.30; | chromosome | CDS | 57358 | 765 | + | 0.288889 |
dapA | bbp090 | dihydrodipicolinate synthase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 100159 | 885 | - | 0.303955 |
dapB | bbp136 | dihydrodipicolinate reductase | RecName: Full=4-hydroxy-tetrahydrodipicolinate reductase; Short=HTPA reductase; EC=1.17.1.8; | chromosome | CDS | 151161 | 819 | - | 0.266178 |
dapD | bbp211 | 2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferase | RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; EC=2.3.1.117; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THDP succinyltransferase; Short=THP succinyltransferase; Short=Tetrahydropicolinate succinylase; | chromosome | CDS | 247523 | 825 | - | 0.293333 |
dapE | bbp089 | succinyl-diaminopimelate desuccinylase | RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; EC=3.5.1.18; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; | chromosome | CDS | 98589 | 1134 | + | 0.302469 |
dapF | bbp533 | diaminopimelate epimerase | RecName: Full=Diaminopimelate epimerase; Short=DAP epimerase; EC=5.1.1.7; | chromosome | CDS | 599411 | 861 | - | 0.264808 |
glyA | bbp268 | serine hydroxymethyltransferase | RecName: Full=Serine hydroxymethyltransferase; Short=SHMT; Short=Serine methylase; EC=2.1.2.1; | chromosome | CDS | 308661 | 1254 | + | 0.30622 |
hisA | bbp098 | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | RecName: Full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; EC=5.3.1.16; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; | chromosome | CDS | 108962 | 726 | + | 0.267218 |
hisB | bbp096 | histidinol-phosphatase | RecName: Full=Histidine biosynthesis bifunctional protein HisB; Includes: RecName: Full=Histidinol-phosphatase; EC=3.1.3.15; Includes: RecName: Full=Imidazoleglycerol-phosphate dehydratase; Short=IGPD; EC=4.2.1.19; | chromosome | CDS | 107294 | 1074 | + | 0.292365 |
hisC | bbp095 | histidinol-phosphate aminotransferase | RecName: Full=Histidinol-phosphate aminotransferase; EC=2.6.1.9; AltName: Full=Imidazole acetol-phosphate transaminase; | chromosome | CDS | 106210 | 1083 | + | 0.263158 |
hisD | bbp094 | histidinol dehydrogenase | RecName: Full=Histidinol dehydrogenase; Short=HDH; EC=1.1.1.23; | chromosome | CDS | 104901 | 1308 | + | 0.294343 |
hisF | bbp099 | HisF protein | RecName: Full=Imidazole glycerol phosphate synthase subunit HisF; EC=4.1.3.-; AltName: Full=IGP synthase cyclase subunit; AltName: Full=IGP synthase subunit HisF; AltName: Full=ImGP synthase subunit HisF; Short=IGPS subunit HisF; | chromosome | CDS | 109681 | 777 | + | 0.305019 |
hisG | bbp093 | ATP phosphoribosyltransferase | RecName: Full=ATP phosphoribosyltransferase; Short=ATP-PRT; Short=ATP-PRTase; EC=2.4.2.17; | chromosome | CDS | 103996 | 900 | + | 0.302222 |
hisH | bbp097 | amidotransferase HisH | RecName: Full=Imidazole glycerol phosphate synthase subunit HisH; EC=2.4.2.-; AltName: Full=IGP synthase glutamine amidotransferase subunit; AltName: Full=IGP synthase subunit HisH; AltName: Full=ImGP synthase subunit HisH; Short=IGPS subunit HisH; | chromosome | CDS | 108368 | 591 | + | 0.258883 |
hisI | bbp100 | phosphoribosyl-AMP cyclohydrolase | RecName: Full=Histidine biosynthesis bifunctional protein HisIE; Includes: RecName: Full=Phosphoribosyl-AMP cyclohydrolase; Short=PRA-CH; EC=3.5.4.19; Includes: RecName: Full=Phosphoribosyl-ATP pyrophosphatase; Short=PRA-PH; EC=3.6.1.31; | chromosome | CDS | 110451 | 621 | + | 0.26248 |
ilvC | bbp541 | ketol-acid reductoisomerase | RecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; | chromosome | CDS | 605635 | 1476 | - | 0.292005 |
ilvD | bbp542 | dihydroxy-acid dehydratase | RecName: Full=Dihydroxy-acid dehydratase; Short=DAD; EC=4.2.1.9; | chromosome | CDS | 607185 | 1839 | - | 0.324089 |
ilvH | bbp207 | acetolactate synthase small subunit | RecName: Full=Acetolactate synthase small subunit; EC=2.2.1.6; AltName: Full=Acetohydroxy-acid synthase small subunit; Short=AHAS; Short=ALS; | chromosome | CDS | 241972 | 480 | - | 0.272917 |
ilvI | bbp208 | acetolactate synthase large subunit | RecName: Full=Acetolactate synthase large subunit; Short=AHAS; EC=2.2.1.6; AltName: Full=Acetohydroxy-acid synthase large subunit; Short=ALS; | chromosome | CDS | 242448 | 1731 | - | 0.326979 |
leuA | bbp493 | 2-isopropylmalate synthase | RecName: Full=Putative 2-isopropylmalate synthase; EC=2.3.3.13; AltName: Full=Alpha-IPM synthase; AltName: Full=Alpha-isopropylmalate synthase; | chromosome | CDS | 554780 | 1173 | - | 0.283887 |
leuB | bbp496 | 3-isopropylmalate dehydrogenase | RecName: Full=3-isopropylmalate dehydrogenase; EC=1.1.1.85; AltName: Full=3-IPM-DH; AltName: Full=Beta-IPM dehydrogenase; Short=IMDH; | chromosome | CDS | 558228 | 1101 | - | 0.301544 |
leuC | bbp495 | 3-isopropylmalate dehydratase large subunit | RecName: Full=3-isopropylmalate dehydratase large subunit; EC=4.2.1.33; AltName: Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate isomerase; | chromosome | CDS | 556816 | 1416 | - | 0.309322 |
leuD | bbp494 | 3-isopropylmalate dehydratase small subunit | RecName: Full=3-isopropylmalate dehydratase small subunit; EC=4.2.1.33; AltName: Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate isomerase; | chromosome | CDS | 556187 | 606 | - | 0.240924 |
lysA | bbp388 | diaminopimelate decarboxylase | RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase; Short=DAPDC; EC=4.1.1.20; | chromosome | CDS | 447462 | 1257 | - | 0.28401 |
metE | bbp031 | 5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase | RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC=2.1.1.14; AltName: Full=Cobalamin-independent methionine synthase; AltName: Full=Methionine synthase, vitamin-B12 independent isozyme; | chromosome | CDS | 32186 | 2271 | + | 0.303391 |
metF | bbp047 | 5,10-methylenetetrahydrofolate reductase | RecName: Full=5,10-methylenetetrahydrofolate reductase; EC=1.5.1.20; | chromosome | CDS | 52577 | 888 | + | 0.255631 |
nifS | bbp544 | cysteine desulfurase | RecName: Full=Cysteine desulfurase IscS; EC=2.8.1.7; | chromosome | CDS | 609579 | 1215 | + | 0.300412 |
pepA | bbp332 | cytosol aminopeptidase | RecName: Full=Probable cytosol aminopeptidase; EC=3.4.11.1; AltName: Full=Leucine aminopeptidase; Short=LAP; EC=3.4.11.10; AltName: Full=Leucyl aminopeptidase; | chromosome | CDS | 385912 | 1506 | - | 0.268924 |
pheA | bbp355 | P-protein | RecName: Full=P-protein; Includes: RecName: Full=Chorismate mutase; Short=CM; EC=5.4.99.5; Includes: RecName: Full=Prephenate dehydratase; Short=PDT; EC=4.2.1.51; | chromosome | CDS | 412135 | 1116 | + | 0.230287 |
prsA | bbp159 | ribose-phosphate pyrophosphokinase | RecName: Full=Ribose-phosphate pyrophosphokinase; Short=RPPK; EC=2.7.6.1; AltName: Full=Phosphoribosyl pyrophosphate synthase; Short=P-Rib-PP synthase; Short=PRPP synthase; | chromosome | CDS | 178982 | 948 | - | 0.347046 |
serC | bbp289 | phosphoserine aminotransferase | RecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT; | chromosome | CDS | 338022 | 1122 | - | 0.250446 |
thrA | bbp183 | aspartokinase | RecName: Full=Bifunctional aspartokinase/homoserine dehydrogenase; Short=AK-HD; Includes: RecName: Full=Aspartokinase; EC=2.7.2.4; Includes: RecName: Full=Homoserine dehydrogenase; EC=1.1.1.3; | chromosome | CDS | 206489 | 2451 | - | 0.272134 |
thrB | bbp182 | homoserine kinase | RecName: Full=Homoserine kinase; Short=HK; Short=HSK; EC=2.7.1.39; | chromosome | CDS | 205537 | 933 | - | 0.310825 |
thrC | bbp181 | threonine synthase | RecName: Full=Threonine synthase; Short=TS; EC=4.2.3.1; | chromosome | CDS | 204244 | 1293 | - | 0.286156 |
trpA | bbp257 | tryptophan synthase alpha chain | RecName: Full=Tryptophan synthase alpha chain; EC=4.2.1.20; | chromosome | CDS | 294709 | 810 | - | 0.255556 |
trpB | bbp258 | putative tryptophan synthase beta chain | RecName: Full=Tryptophan synthase beta chain; EC=4.2.1.20; | chromosome | CDS | 295523 | 1185 | - | 0.324051 |
trpC | bbp259 | indole-3-glycerol phosphate synthase | RecName: Full=Tryptophan biosynthesis protein TrpCF; Includes: RecName: Full=Indole-3-glycerol phosphate synthase; Short=IGPS; EC=4.1.1.48; Includes: RecName: Full=N-(5-phospho-ribosyl)anthranilate isomerase; Short=PRAI; EC=5.3.1.24; | chromosome | CDS | 296707 | 1410 | - | 0.240426 |
trpD | bbp260 | anthranilate phosphoribosyltransferase | RecName: Full=Anthranilate phosphoribosyltransferase; EC=2.4.2.18; | chromosome | CDS | 298131 | 996 | - | 0.259036 |
trpE | bbp526 | anthranilate synthase component I | RecName: Full=Anthranilate synthase component 1; Short=AS; Short=ASI; EC=4.1.3.27; | chromosome | CDS | 589611 | 1569 | - | 0.289356 |
trpG | bbp525 | anthranilate synthase component II | RecName: Full=Anthranilate synthase component 2; Short=AS; Short=ASII; EC=4.1.3.27; AltName: Full=Anthranilate synthase, GATase component; AltName: Full=Anthranilate synthase, glutamine amidotransferase component; | chromosome | CDS | 589033 | 579 | - | 0.295337 |
yajR | bbp411 | putative transport protein | RecName: Full=Uncharacterized transporter bbp_411; | chromosome | CDS | 481565 | 1185 | - | 0.231224 |
yhfC | bbp477 | putative transport | RecName: Full=Protein TsgA homolog; | chromosome | CDS | 537013 | 1167 | + | 0.250214 |
yjeK | bbp022 | putative aminomutase | RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; EC=5.4.3.-; AltName: Full=EF-P post-translational modification enzyme B; | chromosome | CDS | 21944 | 1023 | - | 0.26393 |
ynfM | bbp532 | putative transport protein | RecName: Full=Uncharacterized transporter bbp_532; | chromosome | CDS | 598039 | 1212 | - | 0.283828 |