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2024-05-29 03:56:29

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: chromosome II

Number of genes found: 138

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Vibrio vulnificus CMCP6, CMCP6
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA VV20595 Predicted amino acid aldolase or racemaseSubName: Full=D-serine deaminase; chromosome II CDS651837 1266 + 0.519747
NA VV20833 3-deoxy-D-arabino-heptulosonate 7-phosphate synthaseRecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase; EC=2.5.1.54; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; AltName: Full=DAHP synthase; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase; chromosome II CDS899651 1071 + 0.501401
NA VV21293 ABC-type dipeptide/oligopeptide/nickel transport system, permease componentSubName: Full=ABC-type dipeptide/oligopeptide/nickel transport system, permease component; chromosome II CDS1419362 993 + 0.530715
NA VV21295 ABC-type oligopeptide transport system, ATPase componentSubName: Full=ABC-type oligopeptide transport system, ATPase component; chromosome II CDS1421316 987 + 0.539007
NA VV20898 Acetylornithine deacetylaseSubName: Full=Acetylornithine deacetylase; chromosome II CDS970978 1125 - 0.536889
NA VV20586 Permease of the major facilitator superfamilySubName: Full=Multidrug resistance protein D; chromosome II CDS639635 1194 - 0.476549
NA VV21177 ABC-type oligopeptide transport system, ATPase componentSubName: Full=Oligopeptide transport ATP-binding protein oppF; chromosome II CDS1275739 966 - 0.494824
NA VV21405 ABC-type amino acid transport/signal transduction systemsSubName: Full=ABC-type amino acid transport, signal transduction system, periplasmic component/domain; chromosome II CDS1551389 786 + 0.477099
NA VV20571 Putative threonine efflux proteinSubName: Full=Threonine efflux protein; chromosome II CDS626971 633 - 0.454976
NA VV20166 Permease of the major facilitator superfamilySubName: Full=Oxalate/formate antiporter; chromosome II CDS186058 1233 - 0.48824
NA VV21102 ABC-type dipeptide/oligopeptide/nickel transport system, permease component chromosome II CDS1187734 972 - 0.501029
NA VV20957 Permease of the major facilitator superfamilySubName: Full=Multidrug resistance protein D; chromosome II CDS1030327 1158 + 0.509499
NA VV21104 ABC-type dipeptide transport system, periplasmic componentSubName: Full=ABC-type dipeptide transport system, periplasmic component; chromosome II CDS1189695 1920 - 0.495313
NA VV20032 Zinc metalloprotease chromosome II CDS32360 1788 - 0.5
NA VV20839 Chorismate mutaseSubName: Full=Isochorismate pyruvate-lyase of siderophore biosynthesis Vulnibactin-specific; chromosome II CDS906929 330 - 0.481818
NA VV21590 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Putative membrane protein; chromosome II CDS1747173 909 - 0.492849
NA VV20002 ABC-type proline/glycine betaine transport system, ATPase componentSubName: Full=Choline ABC transporter, ATP-binding protein; chromosome II CDS804 1194 + 0.479899
NA VV20001 ABC-type proline/glycine betaine transport system, permease componentSubName: Full=Choline ABC transporter, permease protein; chromosome II CDS1 801 + 0.483146
NA VV21672 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS1822897 903 + 0.492802
NA VV20774 Amino acid transporterSubName: Full=Amino acid transporter; chromosome II CDS824493 1254 + 0.502392
NA VV20059 Putative threonine efflux protein chromosome II CDS59988 498 - 0.471888
NA VV21425 Glutamate decarboxylaseSubName: Full=Glutamate decarboxylase; chromosome II CDS1569277 1899 + 0.480253
NA VV20606 Lactoylglutathione lyaseSubName: Full=Lactoylglutathione lyase; chromosome II CDS662754 420 - 0.492857
NA VV20995 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS1075610 1008 + 0.509921
NA VV21235 Arginine/lysine/ornithine decarboxylasesSubName: Full=Ornithine decarboxylase; EC=4.1.1.17; chromosome II CDS1347817 2181 + 0.473177
NA VV21379 Permease of the drug/metabolite transporter (DMT) superfamily chromosome II CDS1522724 786 - 0.491094
NA VV20188 Glycine/serine hydroxymethyltransferaseRecName: Full=Serine hydroxymethyltransferase 2; Short=SHMT 2; Short=Serine methylase 2; EC=2.1.2.1; chromosome II CDS209233 1296 - 0.496914
NA VV20460 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS497173 828 - 0.477053
NA VV21497 ATPase involved in DNA repairSubName: Full=ATPase involved in DNA repair; chromosome II CDS1628272 1647 - 0.373406
NA VV21185 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS1283381 246 - 0.48374
NA VV20996 Methionine synthase IISubName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC=2.1.1.14; chromosome II CDS1076742 1035 - 0.533333
NA VV20486 ABC-type amino acid transport/signal transduction systems, periplasmic componentSubName: Full=ABC-type amino acid transport/signal transduction system, periplasmic component; chromosome II CDS540252 747 + 0.425703
NA VV20592 Na+/proline symporter chromosome II CDS648046 1479 - 0.521298
NA VV21456 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS1589502 888 + 0.476351
NA VV20014 Threonine aldolaseSubName: Full=Low-specificity L-threonine aldolase; EC=4.1.2.5; chromosome II CDS16008 1077 + 0.504178
NA VV21548 Protease IISubName: Full=Protease II; EC=3.4.21.83; chromosome II CDS1695589 2031 + 0.502708
NA VV20499 Isopropylmalate/homocitrate/citramalate synthase chromosome II CDS553639 540 + 0.52963
NA VV20396 Anthranilate phosphoribosyltransferaseSubName: Full=Anthranilate phosphoribosyltransferase like protein; EC=2.4.2.18; chromosome II CDS422318 966 - 0.519669
NA VV20351 Permease of the major facilitator superfamily chromosome II CDS367618 1071 + 0.492063
NA VV20937 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS1013761 1206 + 0.507463
NA VV20053 Threonine aldolaseSubName: Full=Low-specificity L-threonine aldolase; EC=4.1.2.5; chromosome II CDS54072 1008 - 0.485119
NA VV20037 Amino acid permease chromosome II CDS37183 1173 - 0.486786
NA VV21401 Transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome II CDS1547326 1434 - 0.508368
NA VV21676 Dipeptide/tripeptide permease chromosome II CDS1827374 1446 - 0.485477
NA VV20771 Putative threonine efflux protein chromosome II CDS822172 564 - 0.501773
NA VV21663 4-aminobutyrate aminotransferaseSubName: Full=Putative aminotransferase in phosphonate-related cluster; chromosome II CDS1814240 1380 - 0.511594
NA VV21294 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentSubName: Full=ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; chromosome II CDS1420351 954 + 0.52935
NA VV20532 Di-and tripeptidase chromosome II CDS584911 1137 - 0.48197
NA VV20675 Predicted amino acid racemase chromosome II CDS731949 885 - 0.448588
NA VV21689 ABC-type proline/glycine betaine transport system, periplasmic component chromosome II CDS1843848 909 + 0.489549
NA VV21062 PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activitiesSubName: Full=Aspartate aminotransferase; EC=2.6.1.1; chromosome II CDS1140977 1167 + 0.481577
NA VV20939 ABC-type branched-chain amino acid transport system, periplasmic componentSubName: Full=ABC-type branched-chain amino acid transport system, periplasmic component; chromosome II CDS1015505 1164 + 0.491409
NA VV20582 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Putative transporter, DME family; chromosome II CDS637256 879 + 0.503982
NA VV21197 Na+/glutamate symporterSubName: Full=Sodium/glutamate symporter; chromosome II CDS1294877 1227 + 0.480848
NA VV21354 Transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome II CDS1495527 1449 - 0.498275
NA VV21051 Putative threonine efflux proteinSubName: Full=Transporter, LysE family; chromosome II CDS1131533 600 - 0.493333
NA VV20381 Arginase/agmatinase/formimionoglutamate hydrolase, arginase familySubName: Full=Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; chromosome II CDS401237 837 + 0.444444
NA VV20817 ABC-type arginine transport system, permease componentSubName: Full=Arginine ABC transporter, permease protein ArtQ; chromosome II CDS874717 690 + 0.498551
NA VV21381 Argininosuccinate synthaseSubName: Full=Argininosuccinate synthase; EC=6.3.4.5; chromosome II CDS1524275 1215 - 0.483951
NA VV20190 Glycine cleavage system T proteinRecName: Full=Aminomethyltransferase; EC=2.1.2.10; chromosome II CDS211813 1146 + 0.499127
NA VV20913 Permease of the major facilitator superfamilySubName: Full=Membrane protein; chromosome II CDS986340 513 - 0.461988
NA VV21531 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS1677072 1182 + 0.485618
NA VV20818 ABC-type arginine/histidine transport system, permease componentSubName: Full=Arginine ABC transporter, permease protein ArtM; chromosome II CDS875403 669 + 0.508221
NA VV21238 Na+/serine symporterRecName: Full=Serine/threonine transporter SstT; AltName: Full=Na(+)/serine-threonine symporter; chromosome II CDS1352666 1221 - 0.501229
NA VV20043 Glutamate decarboxylaseSubName: Full=Glutamate decarboxylase; chromosome II CDS42507 1680 + 0.475
NA VV21358 Phosphoserine phosphataseSubName: Full=Phosphoserine phosphatase; chromosome II CDS1500086 660 - 0.480303
NA VV20815 ABC-type arginine transport system, ATPase component chromosome II CDS873132 729 + 0.471879
NA VV21261 Phosphoserine phosphataseSubName: Full=Phosphoserine phosphatase; EC=3.1.3.3; chromosome II CDS1382641 603 - 0.517413
NA VV20558 3-deoxy-D-arabino-heptulosonate 7-phosphate synthaseRecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase; EC=2.5.1.54; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; AltName: Full=DAHP synthase; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase; chromosome II CDS613876 1053 - 0.478632
NA VV21479 Permease of the major facilitator superfamily chromosome II CDS1613369 1140 + 0.507895
NA VV20776 Transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family / aminotransferase class-I; EC=2.6.1.-; chromosome II CDS826534 1458 - 0.522634
NA VV21309 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS1439926 999 + 0.50951
NA VV20516 FOG: GGDEF domainSubName: Full=Extracellular solute-binding protein, family 3/GGDEF domain protein; chromosome II CDS569506 1374 - 0.459971
NA VV21669 ABC-type spermidine/putrescine transport system, ATPase componentSubName: Full=Putative 2-aminoethylphosphonate ABC transport system, ATP-binding protein component; chromosome II CDS1819224 1107 + 0.499548
NA VV20826 ABC-type amino acid transport/signal transduction systemSubName: Full=Putative amino acid ABC transporter, periplasmic amino acid-binding protein; chromosome II CDS887489 729 + 0.438957
NA VV21420 4-amino-4-deoxy-L-arabinose transferaseSubName: Full=4-amino-4-deoxy-L-arabinose transferase; chromosome II CDS1567156 351 - 0.45584
NA VV21198 Na+/glutamate symporterSubName: Full=Sodium/glutamate symporter; chromosome II CDS1296564 1227 + 0.474328
NA VV20485 ABC-type amino acid transport/signal transduction systems, periplasmic componentSubName: Full=ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein; chromosome II CDS539118 693 - 0.458874
NA VV20186 Glycine cleavage system protein P, C-terminal domainRecName: Full=Glycine dehydrogenase (decarboxylating); EC=1.4.4.2; AltName: Full=Glycine cleavage system P-protein; AltName: Full=Glycine decarboxylase; AltName: Full=Glycine dehydrogenase (aminomethyl-transferring); chromosome II CDS205841 2865 - 0.515532
NA VV20203 ABC-type amino acid transport/signal transduction systems, periplasmic component/domainSubName: Full=Uncharacterized protein; chromosome II CDS227548 813 - 0.466175
NA VV21292 ABC-type dipeptide/oligopeptide/nickel transport system, permease componentSubName: Full=ABC-type dipeptide/oligopeptide/nickel transport system, permease component; chromosome II CDS1418379 975 + 0.525128
NA VV21402 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS1548847 906 + 0.525386
NA VV21181 ABC-type amino acid transport/signal transduction system chromosome II CDS1279359 723 - 0.452282
NA VV20326 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS339848 915 + 0.461202
NA VV21236 Amino acid transporterSubName: Full=Putrescine/proton symporter, putrescine/ornithine antiporter PotE; chromosome II CDS1350063 1311 + 0.491228
NA VV20975 Phosphoglycerate dehydrogenaseSubName: Full=D-3-phosphoglycerate dehydrogenase; EC=1.1.1.95; chromosome II CDS1049254 987 + 0.518744
NA VV20680 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS735433 1239 + 0.413236
NA VV21255 Putative threonine efflux proteinSubName: Full=Putative threonine efflux protein; chromosome II CDS1375230 588 - 0.515306
NA VV21030 Diaminopimelate decarboxylaseSubName: Full=Ornithine decarboxylase; EC=4.1.1.17; chromosome II CDS1110400 1200 - 0.489167
NA VV20974 Zinc metalloproteaseSubName: Full=Neutral protease; EC=3.4.24.25; chromosome II CDS1047076 1830 - 0.497268
NA VV21485 Threonine dehydrogenaseRecName: Full=L-threonine 3-dehydrogenase; EC=1.1.1.103; chromosome II CDS1621665 1032 + 0.504845
NA VV20783 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS833233 336 + 0.502976
NA VV20011 Anaerobic glycerol-3-phosphate dehydrogenaseRecName: Full=Anaerobic glycerol-3-phosphate dehydrogenase subunit B; Short=Anaerobic G-3-P dehydrogenase subunit B; Short=Anaerobic G3Pdhase B; EC=1.1.5.3; chromosome II CDS12650 1317 + 0.501139
NA VV20169 Permease of the major facilitator superfamilySubName: Full=Inner membrane component of tripartite multidrug resistance system; chromosome II CDS190531 1488 - 0.500672
NA VV20958 Permease of the drug/metabolite transporter (DMT) superfamily chromosome II CDS1032965 831 + 0.505415
NA VV21355 Permease of the drug/metabolite transporter (DMT) superfamily chromosome II CDS1497069 837 + 0.506571
NA VV21673 Glycine/D-amino acid oxidaseSubName: Full=Glycine/D-amino acid oxidase; chromosome II CDS1823918 1473 + 0.504413
NA VV21291 ABC-type dipeptide transport system, periplasmic componentSubName: Full=ABC-type dipeptide transport system, periplasmic component; chromosome II CDS1416674 1638 + 0.485348
NA VV20651 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS702004 1188 - 0.425926
NA VV20823 ABC-type amino acid transport/signal transduction systems chromosome II CDS884720 750 - 0.458667
NA VV20271 Allophanate hydrolase subunit 2SubName: Full=Allophanate hydrolase subunit 2; EC=3.5.1.54; chromosome II CDS299333 936 - 0.46688
NA VV20906 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS978362 915 + 0.513661
NA VV20334 Aspartate/tyrosine/aromatic aminotransferase chromosome II CDS346744 1188 - 0.462121
NA VV21178 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentSubName: Full=Peptide ABC transporter, ATP-binding protein; chromosome II CDS1276673 846 - 0.497636
NA VV21688 Choline dehydrogenaseRecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; EC=1.1.99.1; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH; EC=1.2.1.8; chromosome II CDS1842079 1683 + 0.502674
NA VV20972 Transglutaminase-like enzymeSubName: Full=Transglutaminase-like enzyme; chromosome II CDS1045416 903 - 0.501661
NA VV20730 Dihydrodipicolinate synthase/N-acetylneuraminate lyaseSubName: Full=N-acetylneuraminate lyase; EC=4.1.3.3; chromosome II CDS782710 900 - 0.491111
NA VV20187 Glycine cleavage system H proteinRecName: Full=Glycine cleavage system H protein; chromosome II CDS208810 381 - 0.464567
NA VV20750 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS802335 975 + 0.478974
NA VV20816 ABC-type amino acid transport/signal transduction systemSubName: Full=Arginine ABC transporter, periplasmic arginine-binding protein ArtI; chromosome II CDS873984 732 + 0.456284
NA VV21378 Permease of the drug/metabolite transporter (DMT) superfamily chromosome II CDS1522603 132 - 0.545455
NA VV21677 L-serine deaminaseSubName: Full=L-serine ammonia-lyase; EC=4.3.1.17; chromosome II CDS1829227 1371 - 0.487965
NA VV20961 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS1035476 864 + 0.49537
NA VV20896 ABC-type amino acid transport/signal transduction system chromosome II CDS969601 759 + 0.490119
NA VV20855 Amino acid permeaseSubName: Full=Tryptophan-specific transport protein; chromosome II CDS927789 1215 + 0.484774
NA VV21466 Permease of the drug/metabolite transporter (DMT) superfamily chromosome II CDS1600873 747 + 0.500669
NA VV21664 Serine-pyruvate aminotransferaseRecName: Full=2-aminoethylphosphonate--pyruvate transaminase; EC=2.6.1.37; AltName: Full=2-aminoethylphosphonate aminotransferase; AltName: Full=AEP transaminase; Short=AEPT; chromosome II CDS1815646 1116 - 0.473118
NA VV21660 Transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family / Aspartate aminotransferase; EC=2.6.1.1; chromosome II CDS1811124 1155 - 0.506494
NA VV21116 Na+/proline symporter chromosome II CDS1204810 1440 - 0.511806
NA VV21101 ABC-type dipeptide/oligopeptide/nickel transport system, permease componentSubName: Full=ABC-type dipeptide/oligopeptide/nickel transport system, permease component; chromosome II CDS1186571 1161 - 0.507321
NA VV21453 Permease of the major facilitator superfamilySubName: Full=Permease of the major facilitator superfamily; chromosome II CDS1586580 1200 + 0.46
NA VV20703 Permease of the major facilitator superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS757921 1008 - 0.43254
NA VV21027 Permease of the drug/metabolite transporter (DMT) superfamilySubName: Full=Permease of the drug/metabolite transporter (DMT) superfamily; chromosome II CDS1107659 915 - 0.523497
NA VV20854 TryptophanaseRecName: Full=Tryptophanase; EC=4.1.99.1; AltName: Full=L-tryptophan indole-lyase; Short=TNase; chromosome II CDS926270 1422 + 0.49789
NA VV20500 Isopropylmalate/homocitrate/citramalate synthase chromosome II CDS554135 423 + 0.491726
NA VV20455 Phenylalanine-4-hydroxylaseSubName: Full=Phenylalanine-4-hydroxylase; EC=1.14.16.1; chromosome II CDS491340 792 - 0.44697
NA VV21469 Histidinol phosphataseRecName: Full=Probable phosphatase VV2_1469; EC=3.1.3.-; chromosome II CDS1605217 750 + 0.509333
NA VV20266 Lysophospholipase L1 chromosome II CDS293833 576 - 0.461806
NA VV21400 Oligoendopeptidase FSubName: Full=Oligoendopeptidase F; chromosome II CDS1545347 1848 - 0.496753
NA VV21458 Spermidine/putrescine-binding periplasmic proteinRecName: Full=Putrescine-binding periplasmic protein; chromosome II CDS1591690 1083 + 0.444137
NA VV21635 Spermidine synthaseRecName: Full=Polyamine aminopropyl transferase; AltName: Full=Putrescine aminopropyltransferase; Short=PAPT; AltName: Full=Spermidine synthase; Short=SPDS; Short=SPDSY; EC=2.5.1.16; chromosome II CDS1786602 900 - 0.458889
NA VV21454 ABC-type amino acid transport/signal transduction systemSubName: Full=ABC-type amino acid transport/signal transduction system; chromosome II CDS1587791 768 - 0.458333
NA VV20272 Allophanate hydrolase subunit 1 chromosome II CDS300265 636 - 0.433962
NA VV20795 Serine protease of the peptidase family S9ASubName: Full=Serine protease of the peptidase family S9A; chromosome II CDS845840 2037 - 0.495336
NA VV21477 Lactoylglutathione lyaseSubName: Full=Glyoxylase family protein; chromosome II CDS1611652 384 - 0.502604
NA VV21271 Lactoylglutathione lyaseSubName: Full=Lactoylglutathione lyase; chromosome II CDS1395726 486 - 0.469136
NA VV20573 Predicted branched-chain amino acid permeaseSubName: Full=AzlC family protein; chromosome II CDS628734 714 + 0.52381
NA VV20241 Permease of the drug/metabolite transporter (DMT) superfamily chromosome II CDS270100 852 + 0.470657