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2024-06-01 07:20:48

Gene list

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COG category: Amino acid transport and metabolism
Genomic element: Ti

Number of genes found: 22

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Agrobacterium tumefaciens str. C58 (Cereon), C58
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
AGR_pTi_129 AGR_pTi_129pSubName: Full=Oxidoreductase, GMC family; Ti CDS108259 1626 + 0.589791
AGR_pTi_144 AGR_pTi_144pSubName: Full=ABC transporter, substrate binding protein (Peptide); Ti CDS119960 1596 - 0.587093
AGR_pTi_147 AGR_pTi_147p Ti CDS123280 1005 - 0.60995
AGR_pTi_148 AGR_pTi_148pSubName: Full=ABC transporter, membrane spanning protein (Peptide); Ti CDS124221 1002 - 0.605788
AGR_pTi_177 AGR_pTi_177pSubName: Full=Uncharacterized protein; Ti CDS148364 1119 + 0.507596
AGR_pTi_241 AGR_pTi_241p Ti CDS181209 1197 + 0.654135
AGR_pTi_257 AGR_pTi_257pSubName: Full=ABC transporter, substrate binding protein (Agrocinopines A and B); Ti CDS191701 1566 + 0.545977
AGR_pTi_258 AGR_pTi_258p Ti CDS193300 966 + 0.587992
AGR_pTi_260 AGR_pTi_260pSubName: Full=ABC transporter, nucleotide binding/ATPase protein (Agrocinopine); Ti CDS194262 1020 + 0.581373
AGR_pTi_261 AGR_pTi_261pSubName: Full=ABC transporter, membrane spanning protein (Agrocinopine); Ti CDS195278 927 + 0.568501
AGR_pTi_263 AGR_pTi_263pSubName: Full=ABC transporter, membrane spanning protein (Agrocinopine); Ti CDS196197 861 + 0.567944
AGR_pTi_287 AGR_pTi_287pSubName: Full=Uncharacterized protein; Ti CDS210810 711 - 0.565401
AGR_pTi_49 AGR_pTi_49pRecName: Full=Tryptophan 2-monooxygenase; EC=1.13.12.3; Ti CDS49775 2268 + 0.499118
AGR_pTi_54 AGR_pTi_54pRecName: Full=Ornithine cyclodeaminase; Short=OCD; EC=4.3.1.12; Ti CDS58383 1116 - 0.585125
AGR_pTi_56 AGR_pTi_56p Ti CDS60654 1026 - 0.603314
AGR_pTi_61 AGR_pTi_61pSubName: Full=D-nopaline dehydrogenase; Ti CDS63381 1119 - 0.607685
AGR_pTi_62 AGR_pTi_62pSubName: Full=N-methylhydantoinase A/acetone carboxylase, beta subunit; Ti CDS65107 2037 + 0.61512
AGR_pTi_63 AGR_pTi_63pSubName: Full=N-methylhydantoinase B/acetone carboxylase, alpha subunit; Ti CDS67147 1956 + 0.600716
AGR_pTi_65 AGR_pTi_65pRecName: Full=Nopaline transport system permease protein NocM; Ti CDS70257 726 - 0.575758
AGR_pTi_66 AGR_pTi_66pRecName: Full=Nopaline transport system permease protein NocQ; Ti CDS70984 711 - 0.568214
AGR_pTi_67 AGR_pTi_67p Ti CDS71768 999 - 0.552553
AGR_pTi_69 AGR_pTi_69p Ti CDS72684 921 - 0.567861