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2024-06-10 22:06:55

Gene list

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COG category: Unclassified
Genomic element: pCD1

Number of genes found: 36

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Yersinia pestis biovar Medievalis str. 91001, 91001
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA pCD12 hypothetial proteinSubName: Full=Hypothetial protein; SubName: Full=Uncharacterized protein; pCD1 CDS6747 450 + 0.451111
NA pCD10 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS5934 243 + 0.539095
NA pCD62 hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; pCD1 CDS44639 120 - 0.475
NA pCD59 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS42691 210 + 0.428571
NA pCD65 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS46324 390 + 0.276923
NA pCD84 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS58463 216 - 0.49537
NA pCD80 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS56176 297 - 0.373737
NA pCD76 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS54686 249 + 0.502008
NA pCD64 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS45633 420 - 0.388095
NA pCD91 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS62716 465 - 0.301075
NA pCD90 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS62248 330 - 0.281818
NA pCD09 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS5416 219 - 0.488584
lcrR pCD50 hypothetical protein LcrRRecName: Full=Low calcium response locus protein R; pCD1 CDS37189 441 + 0.489796
lcrV pCD52 V antigen LcrVRecName: Full=Virulence-associated V antigen; AltName: Full=Low calcium response locus protein V; pCD1 CDS37960 975 + 0.377436
repA pCD08 replication protein RepA-like proteinSubName: Full=Putative replication initiation protein; SubName: Full=Replication protein; SubName: Full=Replication protein RepA-like protein; pCD1 CDS3723 867 + 0.542099
sycE pCD82 putative yopE chaperone SycERecName: Full=YopE regulator; pCD1 CDS57327 393 + 0.409669
sycH pCD87 putative yopH targeting protein SycHSubName: Full=Putative yopH targeting protein; SubName: Full=Putative yopH targeting protein SycH; SubName: Full=YopH chaperone; SubName: Full=YopH chaperone SycH protein homolog; pCD1 CDS60476 426 + 0.41784
sycN pCD46 putative type III secretion protein SycNRecName: Full=Chaperone protein SycN; pCD1 CDS34014 372 + 0.526882
sycT pCD66 putative yopT chaperone SycTRecName: Full=Chaperone protein SycT; pCD1 CDS46757 399 - 0.411028
tap pCD07 putative repA translation proteinSubName: Full=Putative repA translation protein; SubName: Full=RepA translation protein; pCD1 CDS3656 75 + 0.44
tyeA pCD45 Yop secretion and targeting control protein TyeARecName: Full=Protein TyeA; pCD1 CDS33749 279 + 0.433692
virG pCD35 putative Yop targeting lipoprotein VirGSubName: Full=Pre-lipoprotein VirG homolog; SubName: Full=Putative Yop targeting lipoprotein; SubName: Full=Putative Yop targeting lipoprotein VirG; SubName: Full=YscC lipoprotein chaperone; pCD1 CDS24887 396 - 0.444444
yopE pCD81 putative outer membrane virulence protein YopERecName: Full=Outer membrane virulence protein YopE; pCD1 CDS56474 660 - 0.510606
yopH pCD17 putative protein-tyrosine phosphatase Yop effector YopHSubName: Full=Targeted effector protein; SubName: Full=Type III secretion injected virulence protein; SubName: Full=Uncharacterized protein; SubName: Full=YopH; pCD1 CDS12347 1407 + 0.474058
yopJ pCD14 putative targeted effector protein YopJSubName: Full=Putative targeted effector protein YopJ; pCD1 CDS9798 867 + 0.346021
yopN pCD44 putative membrane-bound Yop targeting protein YopNRecName: Full=Outer membrane protein YopN; AltName: Full=LcrE; AltName: Full=Yop4b; pCD1 CDS32887 882 + 0.460317
yopQ pCD68 putative virulence determinant protein YopQSubName: Full=Putative virulence determinant protein YopQ; pCD1 CDS48608 564 + 0.336879
yopT pCD67 putative cytotoxic effector protein YopTRecName: Full=Cysteine protease YopT; EC=3.4.22.-; pCD1 CDS47155 969 - 0.431373
yscA pCD33 hypothetical protein YscARecName: Full=Yop proteins translocation protein A; pCD1 CDS23771 99 - 0.313131
yscE pCD29 putative type III secretion protein YscESubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscE; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein E homolog; pCD1 CDS19850 201 - 0.422886
yscF pCD28 putative type III secretion protein YscFSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscF; SubName: Full=Type III secretion cytoplasmic protein; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein F homolog; pCD1 CDS19586 264 - 0.416667
yscG pCD27 putative type III secretion protein YscGSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscG; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein G homolog; pCD1 CDS19237 348 - 0.439655
yscK pCD23 putative type III secretion protein YscKRecName: Full=Yop proteins translocation protein K; AltName: Full=Low calcium response locus protein KB; pCD1 CDS17025 651 - 0.483871
yscO pCD42 putative type III secretion protein YscOSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscO; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein O; SubName: Full=YscO; pCD1 CDS30909 465 - 0.458065
yscP pCD41 putative type III secretion protein YscPRecName: Full=Yop proteins translocation protein P; pCD1 CDS29542 1368 - 0.486842
yscX pCD47 putative type III secretion protein YscXRecName: Full=Yop proteins translocation protein X; pCD1 CDS34382 369 + 0.495935