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2024-06-10 01:16:53

Gene list

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COG category: Unclassified
Genomic element: pDC3000A

Number of genes found: 33

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. tomato str. DC3000, DC3000
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PSPTOA0015 conserved hypothetical proteinSubName: Full=Plasmid partition protein ParB, truncated; pDC3000A CDS18277 219 + 0.502283
NA PSPTOA0026 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS26414 189 + 0.52381
NA PSPTOA0065 exclusion-determining protein, putativeSubName: Full=Exclusion-determining protein, putative; pDC3000A CDS66269 651 + 0.517665
NA PSPTOA0028 mobilization protein MobB, putativeSubName: Full=Mobilization protein MobB, putative; pDC3000A CDS27399 330 + 0.506061
NA PSPTOA0041 lipoprotein, putativeSubName: Full=Lipoprotein, putative; pDC3000A CDS42480 273 + 0.611722
NA PSPTOA0033 hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS34296 399 + 0.556391
NA PSPTOA0058 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS57568 201 - 0.567164
NA PSPTOA0027 mobilization protein MobC, putativeSubName: Full=Mobilization protein MobC, putative; pDC3000A CDS26676 279 - 0.537634
NA PSPTOA0043 traH protein, putativeSubName: Full=TraH protein, putative; pDC3000A CDS43283 474 + 0.618143
NA PSPTOA0007 membrane protein, putativeSubName: Full=Membrane protein, putative; pDC3000A CDS7782 474 - 0.506329
NA PSPTOA0025 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS25520 837 + 0.561529
NA PSPTOA0046 hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS46304 210 + 0.571429
NA PSPTOA0024 hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS25096 378 + 0.555556
NA PSPTOA0038 hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS40825 186 + 0.403226
NA PSPTOA0022 hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS24081 582 + 0.541237
NA PSPTOA0070 hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS72068 624 + 0.591346
NA PSPTOA0023 hypothetical proteinSubName: Full=Uncharacterized protein; pDC3000A CDS24612 351 - 0.652422
HopX1 PSPTOA0012 type III effector HopX1SubName: Full=Type III effector HopX1; pDC3000A CDS14914 1155 - 0.537662
hopAM1-1 PSPTOA0005 type III effector HopAM1-1SubName: Full=Type III effector HopAM1-1; SubName: Full=Type III effector HopAM1-2; pDC3000A CDS5731 831 - 0.397112
hopT1-1 PSPTOA0019 type III effector HopT1-1SubName: Full=Type III effector HopT1-1; pDC3000A CDS21259 1137 + 0.51803
shcO1 PSPTOA0017 type III chaperone ShcO1SubName: Full=Type III chaperone ShcO1; pDC3000A CDS19718 429 + 0.547786
traI PSPTOA0044 relaxaseSubName: Full=Relaxase; SubName: Full=TraI protein; pDC3000A CDS43753 801 + 0.600499
traK-2 PSPTOA0048 traK proteinSubName: Full=TraK protein; pDC3000A CDS47372 288 + 0.583333
traL-2 PSPTOA0050 traL proteinSubName: Full=TraL protein; pDC3000A CDS52006 354 + 0.601695
traM-2 PSPTOA0051 traM proteinSubName: Full=TraM protein; pDC3000A CDS52356 708 + 0.576271
traN-2 PSPTOA0052 traN proteinSubName: Full=TraN protein; pDC3000A CDS53120 1059 + 0.616619
traP-2 PSPTOA0054 traP proteinSubName: Full=TraP protein; pDC3000A CDS55584 666 + 0.599099
traQ-2 PSPTOA0055 traQ proteinSubName: Full=TraQ protein; pDC3000A CDS56258 543 + 0.59116
traR-2 PSPTOA0056 traR proteinSubName: Full=TraR protein; pDC3000A CDS56876 396 + 0.55303
traT PSPTOA0059 traT proteinSubName: Full=TraT protein; pDC3000A CDS57953 660 + 0.622727
traU-2 PSPTOA0060 traU proteinSubName: Full=TraU protein; pDC3000A CDS58596 3048 + 0.59416
traX-2 PSPTOA0063 traX proteinSubName: Full=TraX protein; pDC3000A CDS63150 603 + 0.583748
trbA PSPTOA0066 trbA proteinSubName: Full=TrbA protein; pDC3000A CDS67012 1200 + 0.589167