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2024-06-01 06:31:41

Gene list

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COG category: Unclassified
Genomic element: Ti

Number of genes found: 66

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Agrobacterium tumefaciens
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
apeA apeASubName: Full=ApeA; Ti CDS23691 1404 - 0.559117
gene 3' gene 3' proteinSubName: Full=Gene 3 protein; SubName: Full=Ti plasmid pTi15955 T-DNA region; Ti CDS16945 696 + 0.472701
gene 4' gene 4' proteinSubName: Full=Gene 4 protein; SubName: Full=Ti plasmid pTi15955 T-DNA region; Ti CDS15793 414 + 0.475845
gene 5 gene 5 proteinRecName: Full=Uncharacterized protein 1; AltName: Full=Gene 5 protein; Ti CDS754 519 + 0.427746
gene 7 gene 7 proteinRecName: Full=Uncharacterized protein 7; AltName: Full=Open reading frame 3; Ti CDS2000 381 - 0.430446
ocs ocsSubName: Full=Ocs; Ti CDS11651 1077 - 0.513463
ons onsSubName: Full=Ons; Ti CDS9089 576 + 0.46875
repC repCSubName: Full=RepC; Ti CDS109976 1320 + 0.570455
tml tmlSubName: Full=Tml; Ti CDS10150 624 - 0.488782
traB traBSubName: Full=TraB; Ti CDS34650 1227 + 0.612877
traC traCRecName: Full=Conjugal transfer protein TraC; Ti CDS30281 297 - 0.62963
traD traDRecName: Full=Conjugal transfer protein TraD; Ti CDS30061 246 - 0.609756
traF traFRecName: Full=Conjugal transfer protein TraF; Flags: Precursor; Ti CDS34130 531 + 0.606403
traH traHSubName: Full=TraH; Ti CDS35893 630 + 0.584127
traI traIRecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein TraI; Ti CDS106314 639 - 0.604069
traM traMRecName: Full=Transcriptional repressor TraM; Ti CDS37666 309 + 0.543689
trbC trbCRecName: Full=Conjugal transfer protein TrbC; Ti CDS104952 405 - 0.632099
trbD trbDRecName: Full=Conjugal transfer protein TrbD; Ti CDS104660 300 - 0.596667
trbF trbFRecName: Full=Conjugal transfer protein TrbF; Ti CDS99324 663 - 0.594269
trbH trbHRecName: Full=Conjugal transfer protein TrbH; Flags: Precursor; Ti CDS97977 480 - 0.625
trbK trbKRecName: Full=Conjugal transfer protein TrbK; Flags: Precursor; Ti CDS101182 228 - 0.627193
trbL trbLRecName: Full=Conjugal transfer protein TrbL; Ti CDS100001 1188 - 0.627104
trlR trlRSubName: Full=TrlR; Ti CDS55185 639 - 0.58216
virB1 virB1SubName: Full=VirB1; Ti CDS151232 720 + 0.526389
virB2 virB2SubName: Full=VirB2; Ti CDS151966 366 + 0.581967
virB3 virB3SubName: Full=VirB3; Ti CDS152331 327 + 0.550459
virB5 virB5SubName: Full=VirB5; Ti CDS155041 663 + 0.546003
virB6 virB6SubName: Full=VirB6; Ti CDS155800 888 + 0.525901
virB7 virB7RecName: Full=Outer membrane lipoprotein virB7; Flags: Precursor; Ti CDS156721 168 + 0.553571
virC2 virC2RecName: Full=Protein virC2; Ti CDS166669 609 - 0.545156
virD1 virD1RecName: Full=T-DNA border endonuclease virD1; EC=3.1.-.-; Ti CDS168244 444 + 0.531532
virD2 virD2RecName: Full=T-DNA border endonuclease virD2; EC=3.1.-.-; Ti CDS168721 1275 + 0.549804
virD3 virD3SubName: Full=VirD3; SubName: Full=VirD3 protein; Ti CDS170015 606 + 0.537954
virD5 virD5SubName: Full=VirD5; SubName: Full=VirD5 protein; Ti CDS172711 2502 + 0.527178
virE1 virE1RecName: Full=Protein virE1; Ti CDS175665 198 + 0.515152
virE2 virE2RecName: Full=Single-strand DNA-binding protein; Ti CDS175867 1602 + 0.51186
virE3 virE3SubName: Full=VirE3; SubName: Full=VirE3 protein; Ti CDS177534 2019 + 0.521545
virF virFSubName: Full=F-box protein; SubName: Full=VirF; Ti CDS184764 609 + 0.487685
virJ virJSubName: Full=VirJ; SubName: Full=VirJ protein; Ti CDS148762 768 + 0.497396
virK virKSubName: Full=VirK; SubName: Full=VirK protein; Ti CDS143942 438 + 0.488584
ycf ycfSubName: Full=Ycf; Ti CDS25170 849 - 0.551237
ycg ycgSubName: Full=Ycg; Ti CDS26188 498 - 0.634538
ych ychSubName: Full=Ych; Ti CDS27163 258 - 0.581395
yii yiiSubName: Full=Yii; Ti CDS88120 585 + 0.577778
ylf ylfSubName: Full=Ylf; Ti CDS115337 954 + 0.655136
yli yliSubName: Full=Yli; Ti CDS119291 1143 + 0.531059
yma ymaSubName: Full=Yma; Ti CDS120572 846 + 0.535461
ymb ymbSubName: Full=Ymb; Ti CDS121567 525 + 0.546667
ymc ymcSubName: Full=Ymc; Ti CDS122268 1116 + 0.519713
ymd ymdSubName: Full=Ymd; Ti CDS123380 1338 + 0.581465
ymf ymfSubName: Full=Ymf; Ti CDS126780 507 - 0.542406
ymg ymgSubName: Full=Ymg; Ti CDS127283 1167 - 0.552699
ymh ymhSubName: Full=Ymh; Ti CDS128665 801 - 0.545568
ymi ymiSubName: Full=Ymi; Ti CDS129462 204 - 0.588235
ymj ymjSubName: Full=Ymj; Ti CDS129683 390 - 0.569231
yna ynaSubName: Full=Yna; Ti CDS130213 1590 - 0.560377
ynb ynbSubName: Full=Ynb; Ti CDS131811 639 - 0.58216
ync yncSubName: Full=Ync; Ti CDS132665 936 - 0.587607
ynd yndSubName: Full=Ynd; Ti CDS133590 630 - 0.58254
yne yneSubName: Full=Yne; Ti CDS135039 423 + 0.460993
ynf ynfSubName: Full=Ynf; Ti CDS135772 147 + 0.517007
yng yngSubName: Full=Yng; Ti CDS135905 180 + 0.45
ynh ynhSubName: Full=Ynh; Ti CDS138463 480 + 0.572917
yni yniSubName: Full=Yni; Ti CDS138926 354 + 0.581921
ysf ysfSubName: Full=Ysf; Ti CDS185774 297 + 0.548822
ysg ysgSubName: Full=Ysg; Ti CDS186067 243 + 0.452675