Gene list
Applied filters:
COG category: Unclassified
Genomic element: pSLT
Number of genes found: 57
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella typhimurium LT2, SGSC1412 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
PSLT001 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 94 | 285 | + | 0.536842 | |
PSLT025 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 18119 | 297 | - | 0.481481 | |
PSLT026 | putative periplasmic protein | SubName: Full=Putative periplasmic protein; | pSLT | CDS | 18899 | 522 | - | 0.44636 | |
PSLT029 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 20623 | 291 | + | 0.62543 | |
PSLT030 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 20910 | 522 | + | 0.599617 | |
PSLT033 | putative inner membrane protein | SubName: Full=Putative inner membrane protein; | pSLT | CDS | 23477 | 486 | + | 0.687243 | |
PSLT034 | putative adhesin | SubName: Full=Putative adhesin; | pSLT | CDS | 24682 | 561 | + | 0.643494 | |
PSLT047 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 38923 | 489 | - | 0.531697 | |
PSLT050 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 40981 | 327 | - | 0.602446 | |
PSLT056 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 48285 | 471 | + | 0.541401 | |
PSLT057 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 48748 | 357 | + | 0.540616 | |
PSLT060 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 50166 | 222 | + | 0.554054 | |
PSLT061 | putative inner membrane protein | SubName: Full=Putative inner membrane protein; | pSLT | CDS | 50928 | 765 | + | 0.613072 | |
PSLT062 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 52188 | 435 | + | 0.517241 | |
PSLT063 | putative cytoplasmic protein | SubName: Full=Putative cytoplasmic protein; | pSLT | CDS | 52689 | 435 | + | 0.535632 | |
PSLT064 | putative inner membrane protein | SubName: Full=Putative inner membrane protein; | pSLT | CDS | 53359 | 324 | + | 0.524691 | |
PSLT067 | putative cytoplasmic protein | RecName: Full=UPF0401 protein YubL; | pSLT | CDS | 54974 | 243 | + | 0.555556 | |
PSLT087 | conjugative transfer: | SubName: Full=Conjugative transfer protein; | pSLT | CDS | 67730 | 468 | + | 0.510684 | |
PSLT093 | conjugative transfer: | SubName: Full=Conjugative transfer protein; | pSLT | CDS | 73239 | 309 | + | 0.436893 | |
ccdB | toxin addiction system: toxin | SubName: Full=Toxin addiction system: toxin; | pSLT | CDS | 20316 | 306 | + | 0.578431 | |
finO | conjugative transfer: regulation | SubName: Full=Conjugative transfer: regulation; | pSLT | CDS | 93355 | 564 | + | 0.586879 | |
orf5 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; | pSLT | CDS | 9676 | 558 | - | 0.501792 | |
orf6 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; | pSLT | CDS | 8548 | 876 | - | 0.460046 | |
pefB | plasmid-encoded fimbriae;regulation | SubName: Full=Plasmid-encoded fimbriaeregulation; | pSLT | CDS | 14362 | 303 | - | 0.435644 | |
pefI | plasmid-encoded fimbriae; regulatory | SubName: Full=Plasmid-encoded fimbriae regulatory; | pSLT | CDS | 7904 | 213 | - | 0.502347 | |
psiA | Plasmid SOS inhibition | SubName: Full=Plasmid SOS inhibition; | pSLT | CDS | 57753 | 738 | + | 0.609756 | |
psiB | Plasmid SOS inhibition | SubName: Full=Plasmid SOS inhibition; | pSLT | CDS | 57322 | 435 | + | 0.586207 | |
repA | DNA replication | SubName: Full=DNA replication; | pSLT | CDS | 1908 | 882 | + | 0.570295 | |
repA2 | DNA replication | SubName: Full=DNA replication; | pSLT | CDS | 16636 | 990 | - | 0.521212 | |
repA3 | DNA replication | SubName: Full=DNA replication; | pSLT | CDS | 1723 | 123 | + | 0.471545 | |
spvA | Salmonella plasmid virulence: outer membrane protein | SubName: Full=Salmonella plasmid virulence: outer membrane protein; | pSLT | CDS | 30148 | 768 | - | 0.542969 | |
spvC | Salmonella plasmid virulence: hydrophilic protein | RecName: Full=MAPK phosphothreonine lyase; EC=4.2.3.-; AltName: Full=27.5 kDa virulence protein; AltName: Full=Secreted effector protein SpvC; | pSLT | CDS | 27178 | 726 | - | 0.454545 | |
spvD | Salmonella plasmid virulence: hydrophilic protein | RecName: Full=Virulence protein vsdE; | pSLT | CDS | 26267 | 651 | - | 0.328725 | |
tap | replication of plasmid | SubName: Full=Replication of plasmid; | pSLT | CDS | 1850 | 78 | + | 0.410256 | |
traA | conjugative transfer: fimbrial subunit | SubName: Full=Conjugative transfer: fimbrial subunit; | pSLT | CDS | 62636 | 363 | + | 0.534435 | |
traE | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 63346 | 567 | + | 0.488536 | |
traF | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 76687 | 750 | + | 0.532 | |
traG | conjugative transfer: assembly abd aggregate stability | SubName: Full=Conjugative transfer: assembly abd aggregate stability; | pSLT | CDS | 79847 | 2823 | + | 0.520014 | |
traH | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 78468 | 1383 | + | 0.539407 | |
traK | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 63899 | 741 | + | 0.615385 | |
traL | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 63013 | 312 | + | 0.483974 | |
traM | conjugative transfer: mating signal | SubName: Full=Conjugative transfer: mating signal; | pSLT | CDS | 61014 | 381 | + | 0.35958 | |
traN | conjugative transfer: aggregate stability | SubName: Full=Conjugative transfer: aggregate stability; | pSLT | CDS | 74623 | 1827 | + | 0.544609 | |
traP | conjugative transfer | SubName: Full=Conjugative transfer; | pSLT | CDS | 66050 | 597 | + | 0.515913 | |
traQ | conjugative transfer: fimbrial synthesis | SubName: Full=Conjugative transfer: fimbrial synthesis; | pSLT | CDS | 77650 | 294 | + | 0.513605 | |
traS | conjugative transfer: surface exclusion | SubName: Full=Conjugative transfer: surface exclusion; | pSLT | CDS | 82685 | 495 | + | 0.385859 | |
traT | conjugative transfer: surface exclusion | SubName: Full=Conjugative transfer: surface exclusion; | pSLT | CDS | 83215 | 732 | + | 0.501366 | |
traU | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 72228 | 993 | + | 0.567976 | |
traV | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 66866 | 516 | + | 0.583333 | |
traW | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 71599 | 633 | + | 0.616114 | |
traX | conjugative transfer: fimbrial acetylation | SubName: Full=Conjugative transfer: fimbrial acetylation; | pSLT | CDS | 92560 | 741 | + | 0.607287 | |
traY | conjugative transfer: oriT nicking | SubName: Full=Conjugative transfer: oriT nicking; | pSLT | CDS | 62274 | 321 | + | 0.386293 | |
trbB | conjugative transfer | SubName: Full=Conjugative transfer; | pSLT | CDS | 77930 | 549 | + | 0.566485 | |
trbC | conjugative transfer: assembly | SubName: Full=Conjugative transfer: assembly; | pSLT | CDS | 73532 | 639 | + | 0.577465 | |
trbE | conjugative transfer | SubName: Full=Conjugative transfer; | pSLT | CDS | 76460 | 216 | + | 0.481481 | |
trbH | conjugative transfer | SubName: Full=Conjugative transfer; | pSLT | CDS | 86566 | 720 | + | 0.513889 | |
trbI | conjugative transfer | SubName: Full=Conjugative transfer; | pSLT | CDS | 71216 | 387 | + | 0.602067 |