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Gene list

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COG category: Intracellular trafficking and secretion
Gene type: CDS
Genomic element: chromosome II

Number of genes found: 9

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# Pseudoalteromonas haloplanktis TAC125, TAC125

>PSHAb0521 putative Tol protein
MKLFTQMTKMAVLAASISFTCASVAAEPMDLDSLLKNLEQGKSAQSVQNT
QREQQFTARQNEQVQMLKDTQAKRSQMLSESERLETQFEENEIKLANLTD
TLSKRMGSLKELFGVLQQVAGDSSNKFATSVVSAEIPGRSVFMDDLAQKM
GSTSQLASIEDIEKVWYELQREMTEQGKVSRFNTQVIIEGGNKAEQEVVR
VGAFNLISNGKYLEYSPSTNTLSELTRQPVSRYTSTAGDLQQAKNGIVQF
ALDPTGGSILGLLVQAPDTAEQVHQGGAVGYVILGVGLLALLIAIERFVS
LLLVGGKIRRQLKDTVARDDNPLGRVMKVKDDYPNVAYDTLELKLSEAIL
REMPKITRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPKLM
AGGISQALVTTVLGLVVAIPTVFIYTILNTRAKSLLLILQEQSAGIIAKR
SEKGA
>PSHAb0522 putative TonB system-dependent transport protein
MVLLIDSINAIRDFLDTGGQVLLVIGVLIFAMWLLILERFIYFFNGFRGY
KKAIKNSWLKRNERNSWNAEQIRQAMISRASMRLNANLALINVMVALCPL
LGLLGTVTGMIEVFDVMAITGTGSARSMASGVSKATIPTMAGMVGALSGV
FASTYLQRRAKREVALLEDSMVLDH
>PSHAb0325 putative outer membrane protein oprM precursor of a metabolite export system
MNLKTLGLNALTLAVLTGCQLAPEQQEIALPVPDAYASGAEQAQATQLNW
QQFFNDEKLQALIAQSLEHNKDLQIAALNVQRVRGLYQIEDSALFPSLDI
NGSGSRQRLPGDLSSTGEPRINSQYSATVGITSYELDIWGKVRNQSAQAL
QTLYSTQLSQYSMQVSLIAELANAWLNYATDQQLLALAEETLTSQQSSLS
LTQQSFDLGAASAITLEQLKSTVATAKVDIAKYKRLLKRDKNALDLLVGN
SVASDLLPNASLNHLLDLPEVPVGLPSDLLTQRPDIKAVEHQLLAANANI
GIARAAFYPSISLTANAGTASSDLSGLFDGGSGTWSFVPTINLPIFNMGR
NQANLDVAKAAQQIALTTYQQKIQQAFREVADVLADREGYNAQLSALEQL
VQSRQATFDISQARYDKGADSYLQVLDSQRTWYSAQQQLITGKQALLASK
INLYKAVGGGWQVTSPAVQD
>PSHAb0372 putative lipoprotein, possibly associated with the outermembrane
MIKLVQKNLKTSLTTSAILIAAMLSGCAAKIDAASEKNVVSEFIASANIA
SELNNIDETNWWQKLESAQLNQLVTDALANNHNLQTSQLVLKSALARLGE
QQAQYLPQGGVEIGAQRSGLGDTNSRQSSANLALNWQLDLFGRITALVDA
ANASAMSQAEQVRLLQIEVVSSVVKGFVSYQGNVQKQHIVTLQIDALEQS
IAVLQAQVDEGVANELDLNRTMAQLKQQQALMPAIEYAKYRDLSTLAVLS
GQLAQNVKLTNEQAILEHKFTVSLNDANESIALRPDISQALYAFSQANSL
SVAASKALLPDISLSGFAGVLSIGSNSFSDTQQQWQVAPQIQWSILSYPA
LIAQRDAQQLLTQAAYSDYQQVILQALSESELSLQLLVNQAQQKSFAEQR
YQFANNAFLQAQAMYEEGQIPYLELLDARRDVLIAQENAVDSTISSLLAK
VNAYQSFNGRWSYALNNTNQ
>PSHAb0523 putative TonB system-dependent transport protein
MRAPLGNLFQEDEAEEINMTPMLDVVFIMLIFFIVTASFVKESGIDVNRP
EAATAVKKERANILVAISDTGEIWINKRQIDVRAVQANIERLKAENPQGS
VVIQADKKSTTDTLIKVMDAARAAGVFDVSIAAQEA
>PSHAb0070 putative biopolymer transport protein, MotA/TolQ/ExbB proton channel domain
MQSTFNAVGIMAWPLLLVSIIALAIVLERSTILIIAKWQLKQHKLGTSQF
AITLQAKQLLHSEQRLQWCQLYLQDCLIDWRKRLNILSLLASLSPLMGLL
GTVWGLVVMFKRIAETNQAVTPALLADGLWEAMYSTMAGLVIAIPCLLVS
GLLNTILEGLQNDFTRIINHLNYKFTYSDSPYA
>PSHAb0140 putative lytic cell-wall binding lipoprotein
MRPLLVLTISTLALGGCVTENSYNGSDKPVVENKINSAGAARTRIALALQ
YLNTGNNSQAKYNLERASEYAPNLPEVHYSLAYYYQQVGENKLADLAYQK
ALAIKPDDPNTLNNYGVFLCGIDEYDRATDQFLKAIAIPSYIRVAQSYEN
LALCAIEFDDFDNAETYFQQAINHSSQRASTLISLAALYYAKSDLYKASA
LLKRYDDTAQISPRALLLSYLIKQRMGKIEEAEKIAATILQTYPSSDQAF
AIRDSQIKQTEFEVLREKYRQAQLNELKQDGSEAQLSSQPKIKIIRKKRP
SQNDSTSLISANKTPVATVTAPAAVIAEVKPAQPSSKTVAPTSQTNTALN
AKLITNQSSKQAIVSPLSTQPETPPSTLPAAQVAANNNVKIISFGAPQPA
NNSANKANTTNTTFSQTSTQPSNNGQVVFYKATKNADVFTSNNSNELDTI
ELRNAPTSNDNKLPMLNPKVAPLTVPFHIIEFGENLFSISVRYNVKLQKL
LLWNGLKESDRVMNGSKIYLNDPNIYYEIKAGDTLFEIATQRQVLIDELM
RWNKLSPDIALTPGHNLLLVDPDSYLL
>PSHAb0475 conserved protein of unknown function
MSKFFFMGKPDIMGKNNSNGFSPKRNEKVGSELHPLSLVVNSPQRKLEVE
AIVQEHKLFATVELNTQSDEDIRELEFALVKSTPQVFDKVPERNSPCLCG
SGKKYKKCCA
>PSHAb0197 csgA, putative secreted major subunit of curlin, may bind calcium
MKLTKSILSCAVAVAMGASFASYANTDTKSASNSEIGTAISVMSASNNMT
LIQNNNNNDALLVQVGDNNTMLATIDGNENYTEITQNQTGNYAGVATVGN
SNTEEYSQDGVANGLISQVTGDYNSLVVAQEGVGFLVNNEAINIITGDDN
TIDVAQGAGGHWFYNLDMQGNANEISAVQTGEWHEAEITSLTGDQNTIDI
EQSGVYWNAFTINSLQGNDNDLDIEQDGSRNIATFSDVSGDANELKVEQD
GESNAVNFAAIVGSDNEIDLDQEGTSNTADSALFLGNNNEITITQLDTLN
SATAELIGDNNELTATQNGFGNEAYMGVIGSDNEFLINQVGDLNAAHLVN
FNGTGNDVDVFQNGDENTTVVESSYPNTALTSNDNNIDIMQSGVANETMV
TLAGILDSNTNRIDISQTGEINLVDIMVEGSGHSIDISQEGEGNWVTGMD
QSAFLIAGEDVSFTVNQIGNDNLVQGGIIGSNNMVSVTQIGDGNTATVTQ
M