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Gene list

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COG category: Intracellular trafficking and secretion
Gene type: CDS
Genomic element: chromosome 1

Number of genes found: 13

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# Photobacterium profundum, ss9

>PBPRA3279 MSHG, putative MSHA biogenesis protein MshG
MMPVFNYRGRGSKGQLQRGQVEAANQEVAADVLMRQGIIPLEIRQGKAKG
DSFDFKQLFQNDIPLEALVIFCRQLYSLTKAGVPLLRAIKGLGQSASHPL
MKETLDAVMSDLTNGHSLSAAMKQHRRVFSDLFVSMIHVGENTGRLDESL
LQLAHYFEQEMETRRRIKSAMRYPLFVISAIMLAMVVLNIKVIPQFASMF
ARFGVDLPLPTRILIGTSNFFVHYWPLMLGAGIVSGLALKMWRRTPKGQE
RWDSWRLKTPVVGHIVNRAQMSRFSRTFALMIRAGVPLNQAIQMSAEALG
NRFLENRLIEMKNGIESGNSITSTATDSGVFTPLVLQMIAVGEETGQVDN
LLLEVSDFYDREVEYDLKTLTARIEPLLLLVVAVMVLILALGIFLPMWGM
LDVARGV
>PBPRA3283 MSHL, putative MSHA biogenesis protein MshL
MRGLVIGILLAFLLGCSTNMGHQDPVEIKEALNIAANEANSRPLDDLPSA
VNDDLMPSFGSNDYMASSALEKRFRVSARNVEARTFFGSLVKGTPLNMVI
HPNVQGRISLTLRDVTLDEVLDVVSDIYGYNATRKGNIIQIFPATLRTEA
IPVDYLQLQRRGVSLTSITTGSITSSDSGSSGSGSSSNNSNSDNSSNNNS
DSGSGGNNSSTTTGGTTIETTSESDFWSQLEKAVQAMIGSGEGRSIVVSP
QASLISVRAYPNELREVKEFLSVSKKRLKRQVVLEAKIMEVTLSDGYQQG
VNWSNITSSIGGTDIVFGRTGPSALPGGDAISALLGGQTNLTISDGNFEA
VLSFLETQGDLNVLSSPRVTAANNQKAVIKVGGDQYFVTDISGGEVSGDN
STSAPDIELTPFFSGISLDVTPQIDDEGGVLLHVHPTVVEVVNETKEIDL
GATFGVYKLPLAKSSIRESDSVIFARSGDVVVIGGLMKSAINDQVSKVPF
LGDIPGLGHLFRNVNKVKSKTELVILLKPTVVDEQTWQQEIERSRALVTE
WFPEQD
>PBPRA3200 PILA, hypothetical pilin PilA
MKKMQKGFTLIELMIVVAIIGALSAIAIPAYKDYVKKSELAAAVATMKAL
VTEAELIYQEKGAVVSTTPLTDLGTKADANPLGVISVSADNNLQFKFGDN
SASKDLLVTFDRSATGWACTQTTGAEIDSCPAPKS
>PBPRA3202 PILC, putative Type IV pilin biogenesis protein
MNPATKLRYYHWRGLNQAGRKVSGVIIGYQEQEVRSKLTEQRIHIKKIKR
RKPSTFSKLRNQMKPEDITETTRQLATMIESGVPVVQSLKLIANSHHKAE
VRATLSQVTMQVEAGASLSKALKTSSPLFDDFYCDLVATGEQTGHLGEVF
SRIATYREKGEIMRKKVIKAMIYPTMVTLTAVIVTVMMLIFVIPQFASIF
SSFGAELPLFTQLVINASDFLIAHGLYFTIGLVSIICLYYYSHKKSYNFR
LKVDRLSLRLPILGNVLLKATIARFARTLATTFTAGIPLLSGLQSAGKTA
GNLYIANAVYEAHANTAAGMPLYLALRQSGVFPELMLQMTMIGEESGSLD
DMLNKMALLYENDVDNTVDNLGKILEPLIIIILGGLIGGLLVAMYMPIFS
LMSVMG
>PBPRA3042 PLU1256, putative signal recognition particle protein
MFENLTERLSRTLKNVSGRGRLTDDNIKDTLREVRMALLEADVALPVVRE
FVKRVKERAVGSEVSKSLTPGQEFIKIVQAELESVMGESNEALDLACQPP
AVILMAGLQGAGKTTSVAKLGKVLKEREKKNVLVVSADVYRPAAIKQLET
LASDVGIDFFPSSVEQKPVDIVSAAVAHGKLKFYDVVIVDTAGRLHVDDV
MMDEIKDIHKAANPVETLFVVDAMTGQDAANTAKAFNDALPLTGVILTKV
DGDARGGAALSVRYITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLERNVDKSQAEKLAKKFKEKKGFDLEDFRSQLQQMKNMGGMGGM
MDKLPGMSQLPDNVKDQVDDRMFLQMEAIINSMTKGERSRPEIIKGSRKK
RIATGSGTQVQDVNRLLKQFTQMQKMMKKMQKGGMKNMMRNMKGMMPGGG
MFPGR
>PBPRA3203 PSPTO092, putative leader peptidase PilD
MELFTYYPWLFPVFAAIFGLLIGSFLNVVIHRLPIMMERQWKADCIECFP
EFDKENKQEKDNNSVATTPVFNLSVPRSRCPHCQHAITMWENIPVISWLV
LKGKCSACGAKISARYPTIELLTAVMTTIISLMLPSSLWAVAVIFFSFAL
IALTFIDIDTMLLPDQITLPLMWAGIAAALVGLSPVSLQDAIIGAMVGYL
SLWSLFWSFKLITGKEGMGYGDFKLLAALGAWLGWQSLPFVVLLSSLVGA
VCGIILLRVQRSDSQTPFSFGPYLAMAGWISILWGDQVISWYLHSYIGM
>PBPRA3280 RB12774, putative MSHA biogenesis protein MshE
MQIRLRKRLGDLLVDEGIVVQAQLEQALSQQQSTGRKLGDTLINMGFLTE
QQMLSFLSQQLDIPLVDLTRANVDMEAVSLLSEVHARRLRALVIDHRGDT
VRVAMSDPADLATQEAVYNQLGEYRVELVIARERQLIAAFDRYYRRTKEI
VSFAEQLQAEHKTDSVFAFGFDDDNEDVTVVKLINSLFEDAIQVGASDIH
IEPDTDVLRIRQRIDGVLHETLLNEASVASALVLRLKLMSGLDISEKRLP
QDGRFNVKIRGHSVDVRVSTMPVQHGESVVMRLLDQSAGILNLDEVGMPA
DILQRFRRQLKRPHGMILVTGPTGSGKTTTLYGALSELNKPGKKLITAED
PVEYRLPRVNQVQVNNKIGLTFSSILRTFLRQDPDIILVGEMRDQETVEI
GLRSALTGHLVLSTLHTNDAIDSALRMMDMEAPGYLVASAVRAVLAQRLV
RRVCRDCGEIETPDAAQIQWLKARFTEHQHREFHRGRGCQTCNFTGYKGR
IGVFELLEMNQAMMDALRDNNAVLFSQIARESEGYQPLVASAMGLALEGR
TSLDEVLILGDGDLNDGFLV
>PBPRA3282 SO1297, hypothetical type II secretory pathway, component ExeA
MYQSHFRLNQAPFALTPNTSLFHALPPHLEAIQTVLSALEMGEGIIQISG
EVGTGKTLVCRMLINQLPERFDLAYLPTPAMNGHELRAALANELNLSRDG
DNTMLTERIHDELIQRKSQGKTVVVLLDEAQALPDEALEVIRLLGNLETE
HEKLLQIVLLGQPELDQRLAQHNLRQFRQRITFRANLRPLDLAETISYIE
YRLQQAGCHKALFTLSDYRALWKSSQGIPRVINQLCHKALIAAYGSNQQK
VTNKEVLMAIKDTLSARQPKWTYPVLWGWS
>PBPRA3090 SO1347, putative signal peptidase I
MANTFSLILVLATLFTGLIWALDRFVWAPKRQLKIDAAASNAGDQVDVKT
LETVAPQPSWIESTSSMFPVIALIMVFRSFVYEPFQIPSGSMMPTLLIGD
FILVEKFAYGLRDPVFRHKLIETSEPERGDVVVFKYPPQPNIDYIKRVVG
MPGDTVRYSADKQICIAPKGTADCTFVPLTNMADSEFTQNMTRLVQFNEK
LGDADHQILVNPLKRDRTLAYQPRPGITEWVVPEGHYFMMGDNRDNSADS
RYWGFVPEANLVGKAVAIWISFEFERSADSALPSWIPTDVRFNRIGSIN
>PBPRA3208 STM0136, putative SecA, preprotein translocase subunit SecA
MLSKLLTKVIGSRNDRTLRRMRKIVDEINKLEPQFDSLQDEDLKAKTVEF
RERLDQGESLDLLLPEAFATVREASKRVFGMRHFDVQLLGGMVLNNCQIA
EMRTGEGKTLTATLPAYLNALTGKGVHIVTVNDYLAARDAETNRALFEFL
GMTVGINVPNMPPQAKKEAYSADVLYGTNNEFGFDYLRDNMAFRPEDRVQ
RERFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYTRINLLIPQLVKQD
QEDSEDFRGDGHYTVDEKSKQTHLTENGQEFVEELLTQQGMMAEDDTLYS
PSNISLLHHITAALRAHVLFERDVDYIVKDDEVIIVDEHTGRTMPGRRWS
EGLHQAVEAKEGVKIQNENQTLASITFQNYFRLYSKLSGMTGTADTEAFE
FQSIYGLETVVMPTNKPMVRDDMGDLVYMTEAEKFAAICEDIKERFAKGQ
PVLVGTVSIEKSELLSNALKKEGIKHEVLNAKFHEKEAYIIANAGQSGAV
TIATNMAGRGTDIVLGGSWQEEISNLQDPTDAQIAQIKVDWKVRHETVLA
AGGLHITGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDGLMRIFAS
DRVSNMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFDIRKQLLEFDD
VANDQRQVVYELRDELMNADDISGMITQNRDDVILAVVDTYIPQQSLEEM
WDIKGLEERLKADFDLELPIQEWLDTEEKLYEEALRERIVAKAIEVYQQK
EEVVGAEVLRNFEKTVMLQNLDTLWKEHLAAMDHLRQGIHLRGYAQKNPK
QEYKRESFELFEEMLDSLKSDVVSILSKVRVQQQEEVDRMEEERRQQAEE
LARRQQYQHQNAASQIADESDAGQPAESGTFEREARKVGRNEPCPCGSGK
KYKQCHGKIN
>PBPRA3201 TAPB, putative type IV pilin assembly protein PilB
MVQEQNVVDTVHAEGINVPSALTRLGIFSDSELARHIELIFAIALIDIHQ
YDYAECCKKVYQRELVLRHRAIPLQFNDTSLFLGISDPTNLDAQDEFRFA
TGKNVELLLLDNKQLESAIRRIYGSDVGETEHARDISNQDLNNLVDISEG
EIDDTTDLSRDSAPVTRYINQILLEAVRKKASDIHFEPYEESYRIRFRCD
GILHQHATPPTTLSRRLSTRLKVMSKLNIAERRKPQDGRIKLKLTPTLAI
DLRVSSLPTLWGEKVVLRILDSSAASLDIDILGYNDKQKHDYLAALAQPQ
GMILMTGPTGSGKTVSLYTGLKILNTEELNISTAEDPVEINLPGINQVHI
NTQVGLNFSDALRSFLRQDPDVVMVGEIRDIETAAIAVKAAQTGHLLLST
LHTNSAAETITRLTNMGIEDFNLASSLSLIIAQRLARRLCPYCKEVHDLD
VLTRDKFEIPADSLIYKASERGCDDCNKGYLGRVGIYEVMPFSPELAQAL
VAGASTLELERIACQQGMQRLQQSGIEKLMAGTTSLIELQRILHY
>PBPRA3141 XAC2923, putative twitching motility protein PilT
MRMKLQDILNEVVSKKASDLYITVDSPCLLRIDGHLHALGEELMREGVDA
LFDEAMDRELYQEFVTTREANFALVRGDMRFRVSAFWQRELPGMVIRRIE
THIPDLTDLNLPIDMQRMALAKRGLVLIVGATGSGKSTSMAAMIGFRNKN
RSGHILTVEDPIEFVHKHDRCIVTQREVGLDTESYEIALKNSLRQAPDVI
LIGEVRTPETMEYAMNFAETGHLCMATLHANNANQALERILHLVPKERRD
QFLFDLSLNLKCILAQQLIPDAHGIGRHATFELLLNTPRVADLIRRGELH
EIKDVMAKSGESGMMTFDQSLYQLFSEGKITEQDALHHADSANDLRLMIK
IGDQAKMGGSALDGVTVEL
>PBPRA3142 XAC2924, putative twitching motility protein PilT
MDITELLDFSVKHNASDLHLSAGVPPMIRVDGDVRKLSLPALDHSEVHRL
VFDIMNDAQRREYEERLEVDFSFELPNVGRFRVNAFHQSRGGAAVFRTIP
VAIPTLESLNVPDIFYKIAQCQRGLVLVTGATGSGKSTTIAALVDYINEN
TNSHILTIEDPVEFVHTSKRCLINQREVHRDTHSFHNALRSALREDPDVI
VVGELRDQETISLALTAAETGHLVLGTLHTSSAAKTVDRIIDVFPGNDKA
MVRSMLSESLRAVVSQSLLKSVNGGRVAAHEVMIATPAIRNLIRESKIAQ
MYSMIQTGSSMGMQTMEQSVKMLVAQGTVESEEGRRIVNGASSIM