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# Photobacterium profundum, ss9

>PBPRA0701 conserved hypothetical protein
MAKQGSTMAINRVANHVRLQRGVSLIELLIASSLGLIVLASVGSIFLSGH
NMAAERTKQLMLAQDVNDAIRIMKNDIQRAGYNSDNSGTLTLSGASSTIV
VGSTNDSISYVYEDENSDWRIVKFRFKSGSPSVVQMCVNTVPKSVGGVAL
SDASCGSGTAFSLMDQAYINVTEFKVEPTVLSTSSATSSIIDISLSATLK
NTSYTKTVSTTIKTRNWY
>PBPRA0745 C0518, putative protein-export membrane protein SecD
MLNRYPLWKNLMVVLALLVGLLYALPNVYGEDPAIQITGARGASVDMSTL
DTVTEDLKKNNISYKSVAFENGTVLVRFNDTDTQISARDIINEQLGDDFV
VALNLAALTPDWLESIGASPMKLGLDLRGGVHFLMEVDMDAAMEKLLGQQ
EETFRTELREAKVRYRAISKTDSSVAVRLRNDEDLKAAETALAQLHPDML
FTDSNSNGRFVLTAQFTEARLKEIRNYAVEQNITILRNRVNELGVAEPLV
QRQGANRIVVELPGVQDTARAKEILGATATLEFREVDSTADLAAAAAGRV
PAGSEVKYTRDKRPAVLKKRIILAGSHITDASSSADEYGRPQVNISLDSE
GGSKMTAFSRNNVGKLMATVFTEYKDSGKRQADGKVILQKHEEVINQATI
QTALGRNFRITGIDSQAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQ
NIDMGIQAMIWGMVAVMLFTLIYYRGFGLIANMALVMNLVLIIGVMSMIP
GATMTLPGIAGIVLTVGMAVDANVLIFERIREELREGRSPQQAIQQGYAN
AFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIIGTR
AVVNFVYGGKRVDKLSI
>PBPRA0897 FLGM OR, putative negative regulator of flagellin synthesis FlgM
MASIDHLRNSQPMTTARNNQSKVTTTSSGSQPTSAPSLGRQDAVSLSSQG
KAVGQIHQQLATEPSFDSAKVAAIKEAISSGAYVVDADKLASNMMKFEDE
LRGL
>PBPRA0925 FLIH, Hypothetical polar flagellar assembly protein, FliH
MNDDRRRGFLRVSEHQAEELERWAYPDYSKIQEAPRDNALNYDPLWQPQE
LEEEEEQGPPPLTAADLEHIRQSASDEGFNEGKVTGHTEGFDVGKIEGLE
AGHAEGLEQGLAQGLEQGQAQITEHVSHLTQLVEKLANPLKQLDAEVESQ
VLTLVTSLTRELIRVEVQTNPQVMLNTIREVIATLPIAERQIRLSLHPDD
LENVRQAYGDENLVERKWTLIGEPSLNRGDLQVQSGDSTVDYYIDDRIRH
LLEQFSGVNSQRGEAL
>PBPRA0936 NE2488, polar flagellar assembly protein FlhA
MKLSLPFLDKLPLSRLQSLPAVGAPFMVLATLAMIILPMPPVLLDMAFSF
NIALSLVVLLVTIYTRRPLDFAAFPTVLLIATLLRLALNVASTRVVLLYG
HEGPDAAGQVIDAFGSVVIGGNYAVGLVVFLILMIINFMVVTKGAGRISE
VSARFTLDALPGKQMAIDADLNAGLIDQDQARTRRFEVTKEADFYGSMDG
ASKFVKGDAIAGILILCINIIGGLIIGMVQHGLPFGDAIEIYSLLTIGDG
LVAQIPSLLLSIGAAMMVTRQNTDEDMGEQLYFQLFNNPQALIVTGGILF
VMGIVPGMPHIPFLLLAAMIGGFAYWRIKKEKRDALIEKEAPSTELALQP
SQKDLSWDDVQPVDIVGLEVGYRLIPMVDKEQGGELLDRVKGVRKKLSQD
FGFLIPPVHIRDNLELPPNSYRISLMGVACGEANIHPNMELAINPGQVFG
TIDGETTTDPAFGLEAVWIMESQREHAQALGYTVVDSATVLATHLSQILT
NSASQLLGHEEVQNLLEMLGQSTPKLVDGFVPDQLPLGAVVKVMQNLLNE
AIPVRDIRTIIQTLSEYSSKSQDPDILTAAVRIGLKRLIVQEINGIEIEL
PVITLVPELEQILHKTMQSAGGESSGIEPGLAERLQRSLTEATQQQELKG
EPAVLLTSGVLRSTLAKFVKNTIPSLRVLSYQEVPDEKQIRIVNAVGN
>PBPRA0761 PA3805, Hypothetical fimbrial biogenesis and twitching motility protein
MCSLLVGCITVQETGNKKEFNRIDASEARIALGLGYLNDGQWQRARENLE
IALKYAPRYYRAQNALAYYFQIVDENDAAESMYRKALRDSPKNGDVLNNY
GVFLCSEQRYDDAIKAFEKAIKQPYYYLISASYENAGLCSLKKGDNSQAQ
FYFKKSLSHDPYRPKSILQLAQLEIESDNFKDARVMLFKFNKRYGYKADS
LWLLIQLENQAGRLTEVDKYAVLLKEQFPDSQQYQKYLANEY
>PBPRA0699 PA4556, hypothetical fimbrial assembly protein PilE
MNEQKGVTLIELLVAVAIIGVLTAIAYPSYQSHILKSYRNQAMGDLAMIQ
LEIESNRTNGTAYPSSIPSDFCIVCDNSGERYVYTVTSTATTYTLSATKT
TLQSSDSCGDLTLKSTGETTPANCWK
>PBPRA0926 PLU1945, putative polar flagellum-specific ATP synthase FliI
MSSPLANRLSQYQTKGIACRPIASGRLVRVVGLTLEAIGCRAPVGSLCIV
ETLNGDLEAEVVGFSGEILFLMPSEQLLGVMPGAKVTPVLHDNGLPVGPE
LLGRVIDGVGNPLDGLGDIFTEKRASFTSPAINPLLRKPIKEPLDVGIKA
INGLLSVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGRE
VKEFIDEILGEEGRKRAVVIAAPADTSPLMRLKGCQTALTIAEYFRDQGL
DVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNG
SGDQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPA
IDVERSVSRVMPAIVDDEHMLMSKAVRQILSICRKNQDLVSIGAYKPGTD
PTIDQAFSFKPKLDAYLQQEMKESVPYAMCVNMLRSTLSG
>PBPRA0744 PLU3903, conserved hypothetical protein
MSLFISQANAAAEGAPQGGSMQLFIMLGLFAVIFYFMIYRPQAKRAKEHK
TLMSAMGKGDEVLTNGGLLGKITKVSAETDYIVIALNDNNEVTIKKDFVT
AVLPKGTMKSL
>PBPRA0934 PP4353, putative polar flagellar assembly protein FliR
MTYPSALILDWLANYFWPFTRISSMMMTMTFFGARFVSPKIRLYLGLTVT
FAVMPALPAVPANIELLSLQGFLITAQQIVIGVSIGLVTQFVTQTFVLVG
QILGMQSSLGFASMVDPANGQNTPVLGQLYLFLAIMLFLATDGHLEMLNI
IVLSFKTLPIGQEMFRPDDYYQLAGWFGHMFKGALNMALAGVIALLTVNL
SFGVMTRAAPQLNIFALGFSFALLLGLLISWYLVMGMLPQYQHAWDFGFQ
QICSLIRVDC
>PBPRA0935 PSPTO197, putative flagellar biosynthetic protein FlhB
MSDSDGQERTEDATPRKLEQAREKGQVARSKELASVAVLVMGAVSLIWYG
EGLGKALAEIMTQMFSLSREEIYDLSRLFSIMLTAIWSVVFPLGLVLVVL
FLAALIGAAGLGGVSFSVEAAMPKLSKMNPMSGFKRMFGMQSWVELIKSI
LKVLLVAGVAAYLMYSSLNDFLLLSLEIYPSNIFHALDILMQFILLICCS
LLVIVAIDVPYQIWQHNEQLKMTKQEVKDEYKDTEGKPEVKGRIRMLQRE
MAQRRMMADVPQADVIIINPEHFSVALRYDPKLDSAPIVIAKGVDHTALK
IREIANKHNIDIVSAPPLARAIYHTTELEQHIPDGLFVAVAQVLAYIFQL
KQYRKGQGQRPKLAKDAMTIPTELRH
>PBPRA0933 PSPTO197, Putative polar flagellar assembly protein, FliQ
MTPEAFVEIFQEALLMVLIMVCAIVVPGLLIGLVVAVFQAATSINEQTLS
FLPRLIVTLLALMFFGHMMTGMLMDYFFRIIDRIPQLLY
>PBPRA0932 PSPTO197, Putative polar flagellar assembly protein, FliP
MIKNNLIAVVLAAFAFFVSLPVMAEADAMVLPATSASESVTVSSMQNDQG
AASFIQSASRGGIPAFSVTTNPDGSEDYSVTLQILGLMTALGFLPAIIIL
MTSFTRIVVVLSILRQAMGLQQTPSNQVIIGIALFLTLFVMSPVIDKVNA
DAVQPYINEEITAAQAFETAQVPLRQFMLKQTRVKDLESFVNMSGSTATA
PEDVPITVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVASVLMAMGMMM
LSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFGT
>PBPRA0746 SF0346, Putative preprotein translocase subunit SecF
MFQLLKVDNAIDFMRWSKFAFVFSLMMIAVAIGTVATKKLNWGLDFTGGT
LIEVGFEQPADLLKIRDSLEAAGFGDAIVQNFGTARDVLVRLQPRENAKG
EVLGNQIIDALKVGTGQSVEMRRIEFVGPNVGDELAEAGGLAIIISLICI
LLYVSMRFEWRLAAGAVLALAHDVIITIGIFSLLEVEVDLTIVAALLTVV
GYSLNDTIVVFDRIRENFRKMRKGEAPDVINNSITQTLSRTLITSGTTLF
VVVALFMKGGTMIHGFALALLIGITVGTYSSIYVASALALKLGISREHLM
PPQVEKEGEEFDAMP
>PBPRA0927 SO3224, putative flagellar protein FliJ
MSNNALNLILEHAKEEEHQASLALNQARIERQNYLQQLQQIEQYRLDYCK
QLSTRGQEGLTASSYGHLQKFLTQLDETLAKQKEAGHQFEFQIEQCSEHW
NEVRKKRRSIEWLLEKKQTERQKMLDRQEQKMMDEFSTLQFARRNL
>PBPRA0923 SO3228, Putative polar flagellar M-ring protein FliF
MSEQNRELAVAGNDASTQMVTDNDLELQNPDAEEKSATRVDGVLGNLDLL
RQVILVLSVSICVALIVMMVMWIKEPEMRPLGTYDTAELISILDHFDQTK
VQYELDGNTIRVPADDFSSIQLGLTRAGLNNSVAEGDDILLQDMGFGVSQ
RLEGERLKLSRERQLARAIEQIRQVRKAQVLLALPKQSVFVRHNQEASAT
VFLTLGTNGSLKQQEVDSIVDMVASAVPSLKPNRVTVTDQHGRLLSSGTE
DPSATAQRKEYELERKQEQGMREKIDSILIPILGFGNYTSQVDVTMDFSA
QEETRKRFDPSTPSTRSEYTVENYNNGNIVAGIPGALSNQPPADASIPQD
IADMQSGRGSSNGASHREATRNFELDTVISHRRAQTGTVSRQTVSVAVDY
KSLTNPETGEVTRVPVSEAELLKIRRLLMGGVGFSEARGDMLEVIAMPFA
LPTQELIAELPIWENPNFNTWIRWLAAALVIIVIVVVLIRPAMKKLLYPH
QAADGTPLDKNGLPILSSGDDIDLIGSELDSVDGFELSSSNLDLPNLHKD
EDLLKAVRALVANEPDLAAQVVKNWVNEDG
>PBPRA0922 SO3229, Putative flagellar hook-basal body protein
MNVNGLQAEMQAMGLEAQNTSRPATGQQVSADFGALFNDAVKSVNQLQSQ
SSDLSTRFDQGDHSVSLSDVMIARNKSSVAFEATVQVRNKMVEAYKQLMN
MPV
>PBPRA0917 STY2169, putative polar flagellar protein FlaJ
MAMRGSLQAYKRVSVDSQLTSASPHRVIQMLMAGAIERLIQGKASMEQGN
IAVKGERLGKALDIIISLRSCLSMEDGGDIATNLDALYDFMIHQIYKANQ
ENISEPIDDVIDMLREIKSAWEQIPTEFHNITQLER
>PBPRA0700 VP0657, hypothetical type IV pilin
MILRYRHVYKGNWVMPRGMVQSLHHIHFNSWKTLGFTLLELIMTLAIVAI
LVSAAAPSFSHLIDSNKVKRLATEIEWLLVQAKSEAVMRNEELKVHFVRD
DSGELTYQDDGDWILAVTLKAAVITDRASAKNAAIALIDGQDFKRVSIKV
SNNYVSYTIDPIRATPSNLGSYWLYIDSSQDVKVMINKLTGRVRTCGETG
EYYGYKSCS
>PBPRA0896 VP0770, putative chaperone FlgN
MPDTIEQLLELQHATLISLSRLLEQEKGAIVNRQSVEINRIAKDKLSLLN
KIQQQDHLIASHAQRQLLTDNTECMQKVTEIKTIVARCKAANAVNGEALQ
RAQLSFHKLNNLFQQSRGKSQMTYNSEGVAQNIRTLGTNIKA
>PBPRA0931 XAC1946, putative polar flagellar switch protein FliN
MSQNDQQMADDWAAALAEQTVDGAQPAPLEELVDESTPISDDERRKLDTI
MDIPVTISMEVGRTQISIRNLLQLNQGSVVELDRIAGEPLDVMVNGTLIA
HGEVVVVNDKFGIRLTDVISQTERIKKLR