Gene list
Applied filters:
COG category: Intracellular trafficking and secretion
Gene type: CDS
Genomic element: chromosome
Number of genes found: 130
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
XCC0507 | ice nucleation protein | chromosome | CDS | 610452 | 4002 | + | 0.648676 | |
XCC1115 | hypothetical protein | chromosome | CDS | 1302009 | 1665 | - | 0.679279 | |
XCC1376 | pili assembly chaperone | chromosome | CDS | 1600252 | 717 | - | 0.693166 | |
XCC1478 | outer membrane component of multidrug efflux pump | chromosome | CDS | 1727239 | 1404 | - | 0.66453 | |
XCC1756 | conserved hypothetical protein | chromosome | CDS | 2039996 | 2373 | + | 0.667088 | |
XCC2491 | PilY1 protein | chromosome | CDS | 2961373 | 2115 | - | 0.517258 | |
XCC2493 | conserved hypothetical protein | chromosome | CDS | 2964093 | 1155 | - | 0.571429 | |
XCC2498 | conserved hypothetical protein | chromosome | CDS | 2971497 | 600 | - | 0.628333 | |
XCC2651 | conserved hypothetical protein | chromosome | CDS | 3139951 | 1206 | - | 0.700663 | |
XCC2878 | conserved hypothetical protein | chromosome | CDS | 3405695 | 435 | - | 0.671264 | |
XCC3098 | pilin | chromosome | CDS | 3673377 | 435 | - | 0.510345 | |
XCC3309 | hypothetical protein | chromosome | CDS | 3926861 | 360 | + | 0.608333 | |
XCC3318 | conserved hypothetical protein | chromosome | CDS | 3938563 | 2355 | - | 0.6569 | |
XCC3465 | NTPase | chromosome | CDS | 4125704 | 714 | - | 0.596639 | |
XCC3623 | conserved hypothetical protein | chromosome | CDS | 4318319 | 1314 | + | 0.619483 | |
XCC3954 | conserved hypothetical protein | chromosome | CDS | 4682223 | 882 | + | 0.704082 | |
XCC4240 | 60kDa inner-membrane protein | chromosome | CDS | 5073624 | 1722 | - | 0.659117 | |
acvB | virulence protein | chromosome | CDS | 1539249 | 1374 | + | 0.679767 | |
acvB | virulence protein | chromosome | CDS | 2708195 | 1248 | - | 0.6875 | |
avrXccA1 | avirulence protein | chromosome | CDS | 5053926 | 1872 | + | 0.690705 | |
clpP | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 1130147 | 627 | + | 0.620415 | |
czcC | cation efflux system protein | chromosome | CDS | 4790451 | 1266 | - | 0.722749 | |
ecpD | pili assembly chaperone | chromosome | CDS | 1604753 | 756 | - | 0.675926 | |
exbB | biopolymer transport protein | chromosome | CDS | 2505810 | 669 | - | 0.663677 | |
exbB | biopolymer transport ExbB protein | chromosome | CDS | 11315 | 762 | + | 0.637795 | |
exbD | biopolymer transport protein | chromosome | CDS | 2505369 | 438 | - | 0.616438 | |
exbD1 | biopolymer transport ExbD1 protein | chromosome | CDS | 12123 | 423 | + | 0.602837 | |
exbD2 | biopolymer transport ExbD2 protein | chromosome | CDS | 12549 | 411 | + | 0.603406 | |
ffh | signal recognition particle protein | chromosome | CDS | 1394518 | 1377 | + | 0.652142 | |
fhaB | filamentous haemagglutinin | chromosome | CDS | 2084295 | 8757 | + | 0.655818 | |
fhaC | outer membrane hemolysin activator protein | chromosome | CDS | 2082525 | 1701 | + | 0.64903 | |
fimT | pre-pilin like leader sequence | chromosome | CDS | 2965721 | 516 | - | 0.560078 | |
fimT | fimbrial biogenesis protein | chromosome | CDS | 2957144 | 552 | + | 0.603261 | |
fimV | FimV protein | chromosome | CDS | 3020919 | 2058 | - | 0.705053 | |
flgM | flagellar protein | chromosome | CDS | 2289153 | 312 | + | 0.628205 | |
flhA | flagellar biosynthetic protein FlhA | chromosome | CDS | 2234279 | 2094 | - | 0.679083 | |
flhB | flagellar protein | chromosome | CDS | 2236369 | 1131 | - | 0.650752 | |
fliE | flagellar protein | chromosome | CDS | 2258215 | 318 | - | 0.669811 | |
fliF | flagellar protein | chromosome | CDS | 2256480 | 1722 | - | 0.671893 | |
fliH | flagellar protein | chromosome | CDS | 2254863 | 621 | - | 0.706924 | |
fliI | flagellar protein | chromosome | CDS | 2253490 | 1377 | - | 0.707335 | |
fliJ | flagellar FliJ protein | chromosome | CDS | 2253031 | 456 | - | 0.664474 | |
fliN | flagellar protein | chromosome | CDS | 2249684 | 339 | - | 0.660767 | |
fliP | flagellar biosynthetic protein | chromosome | CDS | 2248436 | 843 | - | 0.657177 | |
fliQ | flagellar biosynthesis | chromosome | CDS | 2247081 | 270 | - | 0.596296 | |
fliR | flagellar biosynthetic protein | chromosome | CDS | 2246277 | 792 | - | 0.67803 | |
fliS | flagellar protein | chromosome | CDS | 2271788 | 414 | - | 0.635266 | |
ftsY | cell division protein | chromosome | CDS | 2874941 | 1641 | + | 0.704449 | |
gspE | general secretory pathway related protein | chromosome | CDS | 4860122 | 1812 | + | 0.68543 | |
hrcC | HrcC protein | chromosome | CDS | 1444218 | 1818 | + | 0.651265 | |
hrcJ | HrcJ protein | chromosome | CDS | 1439305 | 765 | + | 0.64183 | |
hrcN | HrpB6 protein | chromosome | CDS | 1441384 | 1329 | + | 0.668172 | |
hrcQ | HrcQ protein | chromosome | CDS | 1433525 | 915 | - | 0.673224 | |
hrcR | HrcR protein | chromosome | CDS | 1432894 | 645 | - | 0.59845 | |
hrcS | HrcS protein | chromosome | CDS | 1432629 | 243 | - | 0.62963 | |
hrcT | HrpB8 protein | chromosome | CDS | 1443211 | 831 | + | 0.629362 | |
hrcU | HrcU protein | chromosome | CDS | 1437138 | 1074 | - | 0.625698 | |
hrcV | HrcV | chromosome | CDS | 1435207 | 1923 | - | 0.632865 | |
lepB | signal peptidase I | chromosome | CDS | 1489235 | 801 | + | 0.615481 | |
lspA | lipoprotein signal peptidase | chromosome | CDS | 1346313 | 504 | + | 0.632937 | |
nodT | outer membrane efflux protein | chromosome | CDS | 4974662 | 1452 | + | 0.721074 | |
oprM | outer membrane protein | chromosome | CDS | 3175688 | 1494 | - | 0.674699 | |
oprN | outer membrane protein OprN precursor | chromosome | CDS | 2750228 | 1512 | - | 0.71164 | |
oprN | outer membrane protein | chromosome | CDS | 1680414 | 1425 | + | 0.678596 | |
oprN | outer membrane protein | chromosome | CDS | 509525 | 1473 | - | 0.727766 | |
pilA | fimbrial protein | chromosome | CDS | 4461187 | 405 | + | 0.624691 | |
pilB | pilus biogenesis protein | chromosome | CDS | 3671579 | 1734 | - | 0.607843 | |
pilC | fimbrial assembly protein | chromosome | CDS | 3674658 | 1257 | + | 0.478918 | |
pilD | type IV pre-pilin leader peptidase | chromosome | CDS | 3675921 | 864 | + | 0.643519 | |
pilE | pilin | chromosome | CDS | 3673891 | 441 | - | 0.55102 | |
pilE1 | type IV pilin | chromosome | CDS | 2957876 | 369 | - | 0.544715 | |
pilF | fimbrial biogenesis protein | chromosome | CDS | 2329099 | 789 | + | 0.628644 | |
pilM | fimbrial assembly membrane protein | chromosome | CDS | 3838741 | 1083 | - | 0.636196 | |
pilN | fimbrial assembly membrane protein | chromosome | CDS | 3837971 | 771 | - | 0.652399 | |
pilO | fimbrial assembly membrane protein | chromosome | CDS | 3837309 | 666 | - | 0.627628 | |
pilP | fimbrial assembly protein | chromosome | CDS | 3836779 | 534 | - | 0.636704 | |
pilQ | fimbrial assembly protein | chromosome | CDS | 3834813 | 1947 | - | 0.631741 | |
pilT | twitching motility protein | chromosome | CDS | 3266476 | 1038 | - | 0.608863 | |
pilU | twitching motility protein | chromosome | CDS | 3265223 | 1131 | - | 0.617153 | |
pilV | pre-pilin leader sequence | chromosome | CDS | 2965251 | 474 | - | 0.540084 | |
pilX | PilX protein | chromosome | CDS | 2963572 | 519 | - | 0.552987 | |
pilY1 | PilY1 protein | chromosome | CDS | 2958319 | 1551 | - | 0.542876 | |
pilZ | type IV fimbriae assembly protein | chromosome | CDS | 1173662 | 354 | + | 0.629943 | |
secA | preprotein translocase SecA subunit | chromosome | CDS | 879643 | 2739 | + | 0.631982 | |
secB | protein-export protein | chromosome | CDS | 260221 | 513 | + | 0.643275 | |
secD | protein-export membrane protein | chromosome | CDS | 2808293 | 1869 | - | 0.645265 | |
secE | preprotein translocase subunit | chromosome | CDS | 1038071 | 357 | + | 0.568627 | |
secF | protein-export membrane protein | chromosome | CDS | 2807233 | 969 | - | 0.615067 | |
secG | protein-export membrane protein | chromosome | CDS | 3003474 | 441 | - | 0.696145 | |
secY | preprotein translocase SecY subunit | chromosome | CDS | 1065091 | 1368 | + | 0.608918 | |
smf | DNA processing chain A | chromosome | CDS | 4459157 | 1137 | + | 0.703606 | |
sppA | protease IV | chromosome | CDS | 4470120 | 1902 | - | 0.667718 | |
tatA | sec-independent protein translocase | chromosome | CDS | 4865921 | 228 | - | 0.649123 | |
tatB | sec-independent protein translocase | chromosome | CDS | 4865318 | 588 | - | 0.687075 | |
tatC | sec-independent protein translocase | chromosome | CDS | 4864584 | 738 | - | 0.643631 | |
tolB | TolB protein | chromosome | CDS | 3563466 | 1320 | - | 0.652273 | |
tolC | TolC protein | chromosome | CDS | 3966811 | 1374 | + | 0.593886 | |
tolQ | TolQ protein | chromosome | CDS | 3566618 | 780 | - | 0.641026 | |
tolR | TolR protein | chromosome | CDS | 3566077 | 450 | - | 0.653333 | |
uptC | type II secretion system protein-like protein | chromosome | CDS | 714478 | 1140 | - | 0.631579 | |
virB10 | VirB10 protein | chromosome | CDS | 2948624 | 1182 | - | 0.568528 | |
virB11 | VirB11 protein | chromosome | CDS | 2947569 | 1059 | - | 0.552408 | |
virB4 | VirB4 protein | chromosome | CDS | 2943358 | 2454 | - | 0.524042 | |
virB6 | VirB6 protein | chromosome | CDS | 3911094 | 1122 | + | 0.598039 | |
virB6 | VirB6 protein | chromosome | CDS | 3920013 | 1107 | + | 0.599819 | |
virB6 | VirB6 protein | chromosome | CDS | 3704999 | 1140 | - | 0.551754 | |
virB8 | VirB8 protein | chromosome | CDS | 2950566 | 1044 | - | 0.546935 | |
virB9 | VirB9 protein | chromosome | CDS | 2949802 | 768 | - | 0.46875 | |
virD4 | VirD4 protein | chromosome | CDS | 2952459 | 1674 | - | 0.596774 | |
xadA | outer membrane protein | chromosome | CDS | 789898 | 7056 | + | 0.686366 | |
xcsD | type II secretion system protein D | chromosome | CDS | 4076618 | 2073 | - | 0.683068 | |
xcsE | type II secretion system protein E | chromosome | CDS | 4075114 | 1500 | - | 0.677333 | |
xcsF | type II secretion system protein F | chromosome | CDS | 4073931 | 1197 | - | 0.680033 | |
xcsG | type II secretion system protein G | chromosome | CDS | 4073440 | 465 | - | 0.677419 | |
xcsI | type II secretion system protein I | chromosome | CDS | 4072551 | 372 | - | 0.688172 | |
xcsJ | type II secretion system protein J | chromosome | CDS | 4071952 | 603 | - | 0.681592 | |
xcsK | type II secretion system protein K | chromosome | CDS | 4070963 | 993 | - | 0.67573 | |
xcsL | type II secretion system protein L | chromosome | CDS | 4069899 | 1068 | - | 0.701311 | |
xcsM | type II secretion system protein M | chromosome | CDS | 4069450 | 453 | - | 0.684327 | |
xpsD | general secretion pathway protein D | chromosome | CDS | 807910 | 2280 | + | 0.584649 | |
xpsE | general secretion pathway protein E | chromosome | CDS | 799112 | 1740 | + | 0.644253 | |
xpsF | general secretion pathway protein F | chromosome | CDS | 801066 | 1218 | + | 0.659277 | |
xpsG | general secretion pathway protein G | chromosome | CDS | 802548 | 432 | + | 0.645833 | |
xpsH | general secretion pathway protein H | chromosome | CDS | 802990 | 510 | + | 0.721569 | |
xpsI | general secretion pathway protein I | chromosome | CDS | 803496 | 417 | + | 0.666667 | |
xpsJ | general secretion pathway protein J | chromosome | CDS | 803909 | 639 | + | 0.677621 | |
xpsK | general secretion pathway protein K | chromosome | CDS | 804544 | 852 | + | 0.671362 | |
xpsL | general secretion pathway protein L | chromosome | CDS | 805392 | 1122 | + | 0.698752 | |
yajC | preprotein translocase YajC subunit | chromosome | CDS | 2810469 | 354 | - | 0.641243 | |
yjcP | outer membrane efflux protein | chromosome | CDS | 1628500 | 1515 | + | 0.711551 |