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# Streptococcus thermophilus LMG 18311, LMG 18311

>stu0245 cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ
MNKIQKRLALMGLAASMLLFLSGCVSLDKSGNPTGWVWNLLGRPMSHVIT
YFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKREYLAPIL
EPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFF
SALYYAARYTPGVLKDDFLWFNLGHRDFPLIIIIAALYYFQSWLSIQQVP
EEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLITNYI
IKPRLKEKVAEEFKKNPPKAPRTTPNKRKDVTPKNTQAIANKAKKNRNAG
KQNRK
>stu1810 cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ
MKKKLSLSILGTGALLLLSACGHGDVTSQSSGVWERLILTFGKAIQGLSF
GGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGR
ENREALAYAQQELYKEHGVNPYASFLPLIIQFPILMALYGALTRVPELRE
GSFLWVDLGQKDPYFILPILAAAFTFLSTWLTNKVAKDRSAMLIVMNIML
PIFIFWFGTQISSGVALYWTVSNAFQVVQILVFNNPFKIIAERNRLEAEE
KERKAKIRRAKKKANKRK
>stu1860 competence protein, putative
MNRERRLFMYLSSKLRAFTLLECLVALLVIAGSVQVYQGLTTVLVSNVKQ
VRQQENQDWLLFVQQMEAELEGCQLVKVEWNKLYVKKDNQDLAFGLSSAS
DFRKTNADGRGYQPMLFDVKSSKVSQKNQIVTIQVTLKNELQRSFVYAFE
KTG
>stu1861 conserved hypothetical protein
MVNIKRRSLRGYILIESLVAMAVLVLVSSLILEQINTNRRLMADNLHQQE
VLSVATMAVQTKQDQLTLNGIAVTVKRSQQGITVYESGKEIIHVSKQ
>stu1608 ABC transporter membrane-spanning protein
MIAELFKERSRRFTTRCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRH
FPKNPWAIILGLLVLCLLLPFWGNIATYLEPADKHYLLVKEEEVLDHIKK
ATGCAFRFWVLIQTLIFILVVPLFLALGLPVWRIVLVAVAMAILKYFIFQ
KKAQPFYKQSGLNWTDAIAAENKRQQSILKFFSLFTNVKGITSSVKRRGY
LDGILKRTKKDKKYTWYNLYLRAFLRSGDYFALSLRLFALTLLVIFLVPE
KWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPIGKDMQVSNLKRLI
NQIVLVMTLIQALCLFDLKFSLILIGVMLVLSLVYLPAKLKKMID
>stu0594 unknown protein
MKMYEDLKNGTSYDNAVQTLGVPDVYSIAVSSDATMTQALWSSNLVTKKG
KTGSLTLNFKNGTLENKSQENLINK
>stu0356 clpP, ATP-dependent Clp protease, proteolytic subunit
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLD
AQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTI
IASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNL
EQILADNSGQPIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
>stu1865 comGA, late competence protein, ABC transporter subunit
MVTEFAKEMIKNADSCGAQDIYVIPRQDNYELYMRVGQERRLIDVYRPDF
MASLIGHFKFVAGMMVGEKRRSQLGSCDYDCGDGHLVSLRLSTVGDYRGL
ESLVIRILHSERRELVYWNQGIQPIKDALDYRGLYLFAGPVGSGKTTLMH
ELVQERFKGQQVISIEDPVEIKQDNVLQLQVNQAIDMNYDSLIKLSLRHR
PDVLIIGEIRDKETARAVIRASLTGVTVLSTIHAKSIAGVYERLLDLGVD
KSELDNALQGIAYMRLIKGGGVIDFARENFQNHSSTNWNQQLEGLVKQGC
LTERDIQGEKIKD
>stu1864 comGB, late competence protein, ABC transporter subunit
MILPEKISKTIRLPTGISSWKVWLNKDVSLRGISKGKKLKISQQVKVIQL
FKQLLKAGFTLTEIVAFLERSHLLKEASLSLMKESLIRGDRLDQMLALVG
FSDNIVTQISLADKHGNLLGSLTKIETYMLRMTKVRKKLMEVATYPILLL
GFLILIMLGLKNYLLPQLLEGDGKNNWAVQLVQIFPQLFFVSLCGLLVLG
LILYLWVKRQSALVFYRRMAKIPFIGQTVRLYTTAYYAREWGNLLGQGVD
LLDLVALMQEQKSKLFRELGADLEEALMLGQSFPERIASHPFFTKELSLI
IAYGEANARLGYELEVYAEEVWQNFFNRLNKATTFVQPLIFVIVAVVIVM
IYVAMLLPMYQNMEGMMS
>stu1863 comGC, late competence protein, exogenous DNA-binding protein
MKLMLKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLRKQKDSVKETG
NAAVVKVVDSQAELYEMKNNKTASLAALVSEGQITQKQADSYNDYYAKHG
GESRSVAN
>stu1862 comGD, competence protein
MRNMVVKAAQWPIRAFTLLESLMTLAVVVFLTLSLSGSVTGIFQQVEINL
FYLRFEYLYRDSQRLASAEGSNVELQLTKDKVSNGRSSLLIPKSIHLDKG
QTLVFDAKGGNSSLTKIRFSSDKEVVTYLLNMGSGKYKKTIS
>stu0896 dprA, DNA processing protein, Smf family
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLF
MEKYKNLDVKQLKEDFQRFPTLSIFDKEYPIELKHSYNPPVLLFYQGNID
LLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLARGIDTCAHM
EALKNKGNTIAVIGTGLDVYYPKENKALQDYMAKNHLVLTEYGPGEQPLK
YHYPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGRDVFAIPGNIL
DGKSDGCHHLIQEGAKCITTGFDIISEFS
>stu0889 ffh, signal recognition particle
MAFESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVK
TFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKI
PTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLK
TLGQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDE
TLMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTK
IDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD
LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDL
LKMLPGMANNPALANVKVDEKQIARKRAIVLSMTPEERENPDLLTPSRRR
RIANGSGNTFIEVNKFIKDFNQAKQMMQGIMSGDMEQMMRQMGLNPNNLP
KNMPNMPDMGNMDMSALEGMMGGTGMPDLGNMDLSQMLGGGLKGKIGSFA
MKHAMKRQANKLKKAKKKRK
>stu1432 ftsY, signal recognition particle receptor (docking protein)
MGLFDRLFGQKKTESQETLANKELTEVISETDSIADQDLSSSELTTGNQA
GQFSKTDTQVEEDLSTESVVTDESEEALTEELSVDNQPSSESEIASESVD
SQATVDSHFADVMADYYAKKAQVAAAAEKGETVTFEAIQTRNVEETATEL
PDSKTETEQEKYNRTLKKTRTGFAARLNEFFANFRRVDEEFFEQLEEMLI
LSDVGVNVATQLTEDLRYEARLENVKKTEDLQRLIIEKLVDIYEKDDVYE
EQINFQDGLTVILFVGVNGVGKTTSIGKLANKYKQEGKNVMLVAADTFRA
GAVAQLVEWGRRVDVPVVTGAEKADPASVVFDGMEKALAEGVDVLMIDTA
GRLQNKDNLMAELEKIGRIIKRVVPEAPHETLLALDASTGQNALNQAKEF
SKITPLTGLVLTKLDGSAKGGVVLAIRQELDIPVKLIGFGEKIDDIGEFH
SEEFMQSLLTGLV
>stu0521 lspA, prolipoprotein signal peptidase (spase II)
MRKVAIPVAILALIGLDQWVKHWVVANISLNQVIKAIPGVFSLTYLQNRG
AAFSILQNQKYFFVILTVLVIGAALFYLVKNYQKSLWLVLSLILIISGGI
GNFIDRVHLGYVVDMVQLDFIDFAIFNVADSYLTVGVLLLILILWKEENG
SHH
>stu0496 mur1, peptidoglycan hydrolase
MAKGKKKTKSKARPKKSKKKKKSVLLFPKFFQKWSLIFIGLFSLLGLLAS
LNFPRLTMEKNMTPTDETTVAFIAEIGETSRYLAARNDLYASVMIAQAIL
ESDSGQSQLSQKPLYNFFGIKGEYNGQSVTLPTWEDDGKGNPYHIDAAFR
SYGSVENSLQDYVEFLEGSYYVGVHRSKTRSYKDATAALTGVYATDTTYG
DKLNSIIEQYQLTIYDTY
>stu0869 mur2, peptidoglycan hydrolase
MESNSGQSGLSQAPYYNFFGIKGSYNGNSVTMRTWENDGTGNTYEIDEPF
HSYGSLSDSLADYAALMTSSTYSGTWKSNTSSYADATQTLTGTYATDSLY
ASKLNSIIAYYGLTIYDQAPVTQETSSSSGLVWNNYRGSYTDAETLSIDV
AWASYKNYK
>stu0117 mur3, peptidoglycan hydrolase
MRRRFKLKAFIILVAVFALGILLPLILHASTVDNARTVKVAYTQKGFIEN
LAPTAQKMSKNYGVLASILLSQAAYESNYGSSLLSVKYHNIYSLPARPGQ
EHIYLKDNVYSKGKWQYQKVDFAVFRDWSSSMSSYLEELRQGRWGESTYK
EVAGTTSYKVAAEKLQAAGFNSDPDYTKHLISIIETYNLVKYDR
>stu0722 pilD, prepilin peptidase type IV
MLSILYFFLGTSLGSFIGLICDRFPEKSIIFPRSHCNQCGHPLRFFEMIP
ILSQLFLRFKCRLCQSSIPYRYLFLELFCGGILLLYFYDYLDFGRTYLLF
FSLCLTIFDLKNKSYPLLIWILGTLPLLCLGNHYLTFSLGISLAVLSYIK
RLNIGEGDFLYLASVSLIFPFSKILIAIELACSFGLMYFLVRKNPNETVA
FVPFLFMSVLILTFM
>stu1730 secA, preprotein translocase binding subunit (ATPase)
MANILRKIIENDKGEIKKLEKTAKKVESYADAMAALSDEELQAKTEEFKQ
RYQNGESLDQLLPEAFAVVREGAKRVLGLFPYRVQIMGGIVLHHGDVAEM
RTGEGKTLTATMPVYLNAISGEGVHVITVNEYLSERDATEMGELYSWLGL
SVGINLSSKSPAEKREAYNCDITYSTSSEVGFDYLRDNMVVRKENMVQRP
LNFALVDEVDSVLIDEARTPLIVSGPVSSETNQLYHRADAFVKTLTEDDY
AIDIPTKTIGLNDSGIDKAEEFFNLENLYDIDNVALTHYIDNALRANYIM
LRDIDYVVSPEQEILIVDQFTGRTMEGRRFSDGLHQAIEAKEGVPVQEET
KTSASITYQNMFRMYKKLSGMTGTGKTEEDEFREIYNMRVIPIPTNRPIQ
RIDHDDLLYSTLDAKFRAVVQDVKRRYEKGQPVLIGTVAVETSDLISKML
VDAGIPHEVLNAKNHEKEAHIIMNAGQRGAVTIATNMAGRGTDIKLGEGV
LELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDELMRRF
GSDRIKHVLERLNADDEDIVIKSRMLTRQVESAQKRVEGNNYDTRKQVLQ
YDDVMREQREIIYAERYDVITAERDLEPEIKAMIKRTINRTVDGHSRNDQ
EEALKGILNFARQALVPEDAISLEDLKEVGEVTKRSVNYDAIKVYLTELA
DNVYDRQIKKLRSEEAIREFQKVLILMVVDNKWTDHIDALDQLRNAVGMR
GYAQNNPIVEYQSESFKMFQDMIGAIEYDVTRTMMKAQIHEQSREHVNER
VSTTATGNIQAHQADANGQEIDFSKVGRNDFCPCGSGKKFKNCHGRKQF
>stu0214 secE, preprotein translocase SecE subunit
MRQTGSIFKVLKDTTWPERKQRWHDFSSVLEYTAFFTVIIYVFDELLSRA
MSALINFF
>stu0624 secG, preprotein translocase SecG subunit
MYNLLLTLLLVMSAIIVIAVFMQPQKNPSSNVFDGGGAEALFERSKPRGF
EAFMQRFTGIMVFLWIVDAIVLSILSSK
>stu1914 secY, preprotein translocase SecY subunit
MFFKLLKDALKVKNVRHQILFTIFIIFVFRVGTHVTVPGINAESLKQLSD
LPFLNMLNLVSGNAMNNFSIFSMGVSPYITASIIVQLLQMDIYPKFVEWG
KQGEVGRRKLNQATRYITLVLAFVQSIGITASFNTLSSISLVKTPNISTY
LLIGSILTAGSIIVTWLGEQITDKGFGNGVSMIIFSGIIASIPKMFSTIY
EDFFVNVRTGDLTRSYIIVALLIVVGLAIVFFTTFVQQAEYQIPIQYTKL
VQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIFPFFSKVTWLSHLQG
LLSYNTPSGMITYAILIILFSFFYTFVQVNPEKTAEYLQKNGSYIPSVRP
GRETEKYMSSLLKRLATIGAVFLAFISLAPIAAQQFMHLTSSIALGGTSL
LILISTGIEGMKQLEGYLLKRQYVGFMNLED
>stu1766 sipA, signal peptidase I
MQNKWTRYFLTFLHEWGLFILFISLFLLTRLFLWLPVQVEGHSMDPTLAD
GQRVIVLKHTSIERFDIVVAKEVENGKTKQIVKRIIGMPGDTITYQNDKL
TINGKEVKEEYLKEFHAAFAKDKLQKEYAYSDYFQQLAKESKAFTVNADK
NTTFSVTVPEGKYFLLGDNRIVSKDSREVGYFDKSALVGEVKFRFWPLDK
IGTVEDN
>stu1140 sipB, signal peptidase I
MVKRDLIRNIIIAVLAIVVISLLRVFVLSTHRVTKGQANDYIHAGDYVTF
NKKVEPHNKDFILYMVNGKEYTGRVIADEGKSVTAMDDFLYVNDKPVEET
YISKDKSAYLATVSPGNFFTDDFSIGTLTDNKQTKIKKGQYLVLNDNRRD
TEDSRKFGLIEKDQIKGVISFRVYPLSRFGFVDVD
>stu1021 tatC, Sec-independent protein translocase protein tatC
MARSRDEMTIVEHLVEFRRRFIAVVLCFFLVFCITLLFAGEIYAYLTRGF
EKPLLVLGPNDILWIYINLASLMAFTVTLPFITYQIWQFVKPGLRDNEAR
AIFAYIPATFVCFVLGLAFGYYFVSPAILEVLLKLGEGLFNTQITAQNYL
TFLLHTTVPLAVLFEFPVVVSFLTSIGILTPVFLTRYRRYAYFVLLVLAV
ILTPADFISDLAMTAPLILLYEVSVTLSKLIYKRKQRKYKDK
>stu0196 yajC, preprotein translocase, YajC subunit, putative
MNMMLLLVIYAVAIVGYVVFSRRRQAKAQEDRFAGLAKGAEVETIGGLIA
IVDEIDKENNRIVLDAEGVFLTFDLSRSIMKVITPAPSTETAETVKETIV
EEDSAIESADEK