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Gene list

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COG category: Signal transduction mechanisms
Gene type: CDS
Genomic element: chromosome 1

Number of genes found: 17

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# Photobacterium profundum, ss9

>PBPRA0051 Hypothetical protein
MSSRPLKRVNYSIYLDPVNSNADRYAVGVMQGWAKDRKEMMSDPSAGVAL
HYSLHMHKNIYLAGMFLYLLSPALSNALAGSLTEERIKIDTLEQQLENCG
LALPSTKPSLPALDTHALIDELKAAVNMKSLMDEIQQIKAGLVESNTVTA
AVQNGLSESDIAALQQNLAAEIKAHSQHREIAELKALLKTQNQLIKSLSN
GQPLPEVEKSEPELDLSQQIANIQKVKKKGIF
>PBPRA0165 putative LexA repressor
MIKAKIEDSGMPPTRAEIARELGFRSANAAEEHLKALARKEVIEIVPGAS
RGIRVLRHDEVEAKGLPLIGRVAAGEPILAQEHVETHYEVDPALFKPRAD
FLLRVNGMSMKDIGIMDGDLLAVHKTQDVHNGQVVVARVDDDVTVKRLDK
QGSQVLLHAENEDFAPIVVDLTHQQLTIEGIAVGVIRTADWM
>PBPRA0105 hypothetical protein
MALYQTILLSVNPDDIDAHKLMIKAGVVAEQNNAELHIVYVEPGIGNVSY
MDVELGLEESHNDLELKRMSQLSALSKQSPYPVRAVHIADGGVANHVIEL
AEKIRANLVIMGYHKNRFHWCNDISHEVAQKLKCDVMILQ
>PBPRA0189 C4475, putative guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
MYLFDSLKEVAIEYLPESQIEALRQAYLVARDAHEGQTRSSGEPYIIHPI
AVARILAEMRLDQETLMSALLHDVIEDTEVTKEDLASRFGDTVAELVDGV
SKLDKLKFRDRKEAQAENFRKMIMAMAHDIRVILIKLADRTHNMRTLGAL
RPDKRRRIARETLEIFSPLAHRLGIHNIKTELEELGFEALYPNRYRVLKG
VVAAARGNRKEMINKIHAEIEGRIDDAGIEGKVLGREKNLYSIYNKMKNK
EQRFHSIMDIYAFRVLVKDLDTCYRVLGQVHNLYKPRPSRMKDYIAIPKG
NGYQSLHTSLVGPHGVPVEVQIRTDDMDQMADKGVAAHWSYKKNGESSGT
TAQIKAQRWMQSLLELQQSAGSSFEFIENVKSDLFPDEIYVFTPKGRIVE
LPVGATAVDFAYAVHTDVGNACVGSRVNRQPYPLSKPLKNGQTVDIISAP
GARPNAAWLNYVVTARARTKIRQVLKTMRREESITLGKRLINHALGELNI
DQVDPTRLQQLLTNQRLETSDDLLVEIGLGELMSIVVARRLLGNTEDDHS
TDANTGRRMPIRGADGILMTFANCCHPLPGDAIMAHVSPGKGLVIHREEC
SNIRGYQREPDKYMPVEWSEDFEHEFVTTLKVDMQNHQGALADLTNTIAA
TGSNIQGLATEEKDGRLYTITVRLTTKSRIHLAKIMRHIRVMPNVVRVAR
QKN
>PBPRA0185 ECS4246, putative sensor outer membrane protein EnvZ
MRFSPRSTFTRTLVLLSGLLIASQIFSYLTVINYALLPSLQQFNRIIAYE
VRLMLQEDLDLDLDDGEVFHLEQPVRRQLLAQLGVTLHSVDDPDLKEYNR
ATEIEYLSDEMSEELDAKTEVRLVLGAESYVLWMKCDAMPGYLMRIPLSE
LQEEDFAPLFRYSLIIAFMVIAGGWLFIRMQNRPLVELERAALLVARGEI
PPTLPEQGASEVRAVTKAFNQMAEGMKQLEDDRALLLAGVSHDLRTPLTR
IRLATEMMSPEDSYLADGMTKDTEECNEIISQFMDYLKSTKKPVMDVIDL
NDLLQEVAESEGGYENEVELGLSDTPGRIEANAVAMKRCVANLVVNALRY
GNGWVKISSGTSADRKSAWYCVEDNGPGIQEDQVSRMFQPLTRGDSARGS
DAEGTGLGLAIVKRIIDQHDGVITVTNRRDGGLKVQITLSLVK
>PBPRA0007 FLIY, Putative amino acid ABC transporter, periplasmic amino acid-binding portion
MKIWVKTTLTAVALTLAASQTVMAATDVKVGMSGRYFPFTFVKMDQLQGF
EVDLWDEIGKRNDYNVEYVTASFSGLFGLLDTGRIDTISNQITITPERQA
KFLFAEPYVIDGAQLVVRKGNTEIKSTADLADKTVGVNLGSNYEQLLRQL
DNAAQINIKTYDAGIEHDVALGRTDAFVMDRLSSIELIKKANLPLELAGE
PFETIENAWPFVKNEKGEKLRNEVNTALNAMREDGTLADISMKWFDTDIT
K
>PBPRA0231 PLU4794, hypothetical transcriptional regulator CpxR
MPRPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ
LTENNQRANEPECISYQDINIYPGRQEVFCLGESIEMTGTELALLSYLIQ
HPGKIIAKNELSMEVLGKRLAQFDRAIDMHVSNLRKKLPERADGKPRIKT
LRGKGYLLVEEL
>PBPRA0230 PLU4795, Putative sensor protein CpxA
MRFPRFSSLYSRIFAIFWLTLLVVVVTLVLLPNLDPRAQHTIPAQNLKRL
QDSAQDISERISDERGSLKQKLKRYTDRDNHKGIQLYFTTEDGEIISPHG
RNKALRNFITIADDPQNPRQKLYGRWMMAGPLKVTDQQQTTLMYIGRIWR
ETPPFFIQILDKPFQLLLVTMLVSTPFLLWLAWVVSLPARRLQRAAERVA
TGHFEADPKLETGPREFKQAGASFNQMVLAINQMISGQQRLLSDISHELR
SPLTRLRMANALAKRKQGESKELTRIDTEAERLEKMISELLELSRMQVNS
HEQLENSDAHSLWYEMLEDARFEAEQNNKSLTYNALKEWPINGNPNLLIS
ALENVIRNAIKYGNDTITLHFSVQKKQLTIVIDDNGEGVPDDELNDIFRP
FYRVSTARDRSSGGTGLGLAITESAIRQHSGTINASKSPIGGLRITILLP
LSQPY
>PBPRA0020 PSPTO195, Hypothetical two-component response regulator
MMFQPQNPALEQALSAGKTKGYHLTRTTNVFDCLNLVAQKEWDLLLLPAS
LSDGTEAADMIKLFQRHGYHGAVVVLSELQHAAEVTRALQQGAMDYLLIP
FGHTHLAQLVQRLVQTQQQQNMVAESCKSKQMFQLAQRVAQTDASVLITG
ESGSGKEVLAQFIHDSSPRAAGPFIAINCAAIPESMIESILFGHTKGAFT
GATSAQAGKLEVANGGTLLLDEIGELPLALQTKLLRVLQEREVERLGSHQ
KIKLDIHVLAATNQDLEKAIAAGRFRADLYYRLNVFPLHCASLKDRRDDI
IPLANNLLRRHMPPGQASTEFTKAAQKVLCSYDWPGNVRELENVIQRALV
MSRGCLIREEDLMLPTFENITSERITGVPTSASLSVVRPTRKSMTSSTKP
DLQKSRKLAEFDTIIETLRRFDGHRSKTAEELGVSTRALRYKIQTMREQG
LDIEKILTGQNANLVPTNFNFS
>PBPRA0180 VC2005, hypothetical protein
MTIGSVGNSSTYSPATLQASTAGVVKTDAEKSQADNASVNKAADTTVSIS
DDAKRKLAAEADTQTQAKKNADGTVEEDSSVAESFAYGALGMDHPDEVKT
NSDDFYTAGQVLSAIGTVATVLLAIA
>PBPRA0139 VP1147, conserved hypothetical protein
MYSYVARQPILNRQQRTVGYELLFRDGESNAFPLIEANKATCRLLVENYM
AVGDNLATAGQRTFINFPHESLIRLLPLLLPKRRVVIEVLETCIPNDELF
IAIKHLHRNGYVIALDDFEASAEWQRFLPYVHIIKLDLIKLGLEKSCAFV
AENKHRKIKFLAEKVETHQDFQISLDAGFHFFQGYFFSKPELLKNRQIEP
QKLTTVRLLQEICREPVNFKMVEQIIASDVSLSYLLLRYVNTATTRTVEP
ISSFKQALVYLGEDKVRMFVGVVATAHAALNKPKELYSMSLQRARMCEVL
VANSNLKAKSEQAFLTGMFSLLDALLDSSLDQLLALLPLQDEVQTALLHH
QGQLGQVLALLDAYEQADWSKVSAYCTELGISETLVASSHQQALDWTNNY
ENLS
>PBPRA0233 VP2857, Hypothetical periplasmic protein CpxP
MTSFKKALVIAIALPMALGSASALAFGGGNHHGGKGSCGMQDGRKVFSQL
DLTDAQKEQMKSMREMNRDEMKSKRLEKHAEMKANHDKMQELVLASDFDE
NAVRDLAQQMSTAQVERRVAMLEKRHEVLNILTPEQKTQYQTLQAERAEK
CQARMADRQK
>PBPRA0125 VV11115, putative universal stress protein A
MAYKHILVAIDLSDDSFILVNKAATLAKELEAKLSLIHIDVNYAELYTGL
IDINLSDTQFKMFDDAQKQLQALAEKANYPVSHTLVGSGDFSDEICQAIN
NLDIELVVCGHHQDFWSKILSSTKQLMNATPIDLLMVPLK
>PBPRA0210 WAVC, conserved hypothetical protein
MEELCFDNQRIWFDPNLLQEDPKACFDASFWQQQGKVIGSAQGRGTTWFV
QGETLPMALRHYRRGGLFGKLIEDAYVFTGWEKTRCAEEVALLSTLAVGG
VNVPRPVAARATRHGLVYRADLLVEKIDSAKDLVDLLQQAMLPDHVWYAI
GRTVRKMHDLQVCHTDLNAHNILVDSRELVWLIDFDKCYTQEGEAWKAKN
LSRLHRSFVKEQGKRNIHFSATSWQVLCQGYELPDN
>PBPRA0232 Y0067, putative transcriptional regulator CpxR
MAKILLVDDDIELTSLLTDILEMEGFDIVEANNGIEGLEKIDSSIDLILL
DVMMPKMNGTQMLRKLRESFATPSIDANGKR
>PBPRA0184 Y3916, putative transcriptional regulator OmpR
MQENYKILVVDDDMRLRALLERYLSEQGFQVRSVANGEQMDRLLSRETFH
LMVLDLMLPGEDGLSICRRLRNANNKLPILMLTAKGDEVDRIVGLEVGAD
DYLPKPFNPRELLARIRAVLRRQTIEAPGAPSVNSKIVEFGEFRLNLGTR
EMFRGEAPMPLTSGEFAVLKALVTNAREPMSRDKLMNMARGREYSAMERS
IDVQISRLRRMVEEDPSRPRYIQTVWGLGYVFVPDGNEK
>PBPRA0293 YPO0175, putative cyclic AMP receptor protein
MVPGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAV
LIKDEEGKEMILSYLNQGDFIGELGLFEEDQERTAWVRAKSPCEVAEISF
KKFRQLIQVNPDILMRLSSQMATRLQVTSQKVGDLAFLDVTGRIAQTLLN
LAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAH
GKTIVVYGTR