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# Thiomicrospira crunogena XCL-2, XCL-2

>Tcr_1404 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MAEQFDKIHSHIEAIANAMPDPIFVMGQDGTYLDIIGGQERTLYADGHNL
IGKKYADVLPEKMAERFLKVVNKAILSGHLQEIEYQLADSEVQGIEPLRT
TEGQWYEARVYPLDSEAYDQPAAIWLAINITNRKHMEEQIERLSSNDPLT
DLYNRDYFMGVIDEELNKARLNQRPLSLAKINLDCFKRITDAYGHEMGDK
AILTAAHAIKNVVGDLGYIGRLSCDQFMIVLPEIKAVDAFRITKLAQETI
SSQTIQLDKDEKTCLTSHAGVTELREASEDSQILFKRVNKAIKALDGTRE
KTKIL
>Tcr_0905 signal transduction histidine kinase, nitrogen specific, NtrB
MTNPIKQHVSEQEILSGLTTAVVWIDKNENIGFINLAGAELLQLSSQRVI
GMNWRYILPKLLDDIHACGTGRLTIHEYTIRLPDAQKIHVTCTISYYEMD
NEDGWLIELYNTERHHRIAEEDERWHQYEAGNLLVRTLAHEIKNPLAGIY
GSTQLLQKRFPDNDKADQFLEVILREVKRLQNLVDRMLGPRGDSDKEPFN
IHELIGYVIDVIRGEKPENVFIKLDYDPSIPEISMDFEAMVQALLNLAKN
AIQAMEKHGGILTFKTRVESKFTLGTKTYPLVAVISVIDEGEGIPPDVFD
SIFYPMVSSKKDGSGLGLSVSQNIVRQHGGLIVASSEPGNTVFNIYLPFD
HNRIEGKRLH
>Tcr_0189 periplasmic sensor signal transduction histidine kinase
MPSSQQSRFLKQYGWLIAISSILLISLIVMSQILQNASQFAQTYSTLLFI
SLGGMIVLIVMLVRTLLKLRKQYKANIPGLKLTVRLTTIIGFMLGVPLAI
IFYFSMSFVHQGINQWFDVKTEEALENAVKLVQITLDDQTRRNLNNTQQA
LKLYRDELFITPVLTLNKLGEQLNTREIALYKSDGQLIAYSSQDNVNILP
KSPAPRLFQQIRKKLTYAAIETQSGLNTSYQIIRIMLPITDIHNNKHYAL
QAVFSIPEQLSHLADTVRISASQYQELSYLKGPLKTSFTVILSMVLLLTM
ISALLFTIKTIQNITRPIRTLARGTEAVAKGDYAISMPVVQEDEMGQLIH
SFNDMIQQIAKARNDIKFGHQQTEMQKLYLQAIIKNLNSGVLTLDMNLRL
KTINDATNSILNTNLFKQLGKPLNEILKQPESHHLKQFFDTIFPLFRNDA
KPWSEQLTFDCKEGQKILLVHGSTLPSLDQKVGGFVIVIEDITQLVQAQL
HAAWSDVAQRLAHEIKNPLTPIQLSAERLNYKLADKLISSDRRLLNRMTE
TIIEQVAAMQNLVQAFTEYADTPEIELSQLNLNSLIKDVVSMYKDPNANW
KVSYKTDPQCPKITADASKLRQLLHNLIKNAIEACGERPETHIDVRTDCS
QDAINFSICDNGPGIPEKARNWIFEPYSTDKPKGTGLGLAIVKKIVDEHQ
GQIHVESEPEQGTCFIINLPQHTKV
>Tcr_0748 response regulator receiver domain protein (CheY-like)
MQIDRDMNILVVDDFSTMRRIVKNLLKELGFSKFDEADDGSTAWPMIQSG
KYDFIVSDWNMPQMTGIDLLRHVRADEKLKETPFLLITAEAKRSQILEAA
EAGVDGYIVKPFTAATLNGKIQKIFERVEERKKAAGA
>Tcr_2179 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
MHLNFHILIVDDISENIQVAMSLLREEGYQFSFATDGEEALRLADENDFD
LILLDIMMPRMDGYETCRRLKANARTQDIPIIFLTAKVDIDAISKGFKLG
AVDYITKPFHGEELIARVKTHLELYASKQLLKQNNLTLQENLVHREKRYT
TELEENQKEMIFVLTELMEATSDETGQHIRRVAEYSKLLAHYHPGLSIDD
EIIIYHAAPMHDIGKITIPLDILHKPGKLTDEEFNIIKTHTTSAYEMLRF
SKRKFIKSAAIISLQHHEKWNGTGYPSGLKGQDIHIYARIVAIADVFDAL
THKREYKDAWSIEAATEYILEHNGTQFDPQLIDIFTEHLDEFVAIAKT
>Tcr_1203 two component transcriptional regulator, winged helix family
MLNTDYTISIIEDDPLQLENLETALTEQGFQVKAFSDRKSAEMSFEDSLP
DLVISDIILGNEIDGGFELAKHLLSYERAIPVIFLSERQSEFDIYTGHAL
GAIDYLPKPISLSVLTAKVKNLLRITGSSPAVDKNEQSLIEGLGLANEEF
KAYWQEKPLDLTATEFEMLKQFALTGERGVVTYDTLQESTQGVVERNTIN
THICRIRSAFKKIDPEFNLIHNEYGRGYSWQKK
>Tcr_1931 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MIISLKKMLRSLLFLVALLGYTELVYAVPTFGEFFERQGAVMLIMDPVTG
KIVRANRAAENFYGYSRDELKKMSIQDLNTLTPKQVSKELALAREEKRNY
FIFHHRLAGGQTRQVAVHSIPYSFDNQSFLVSTIHELSSGSHQQQDLQHY
QQNLEELLQLQETELKESQERQSLILVLAVFTQAILILFLFYDISRRKQL
QAELKQVATTLTNIMDSSTEVAVIATDTEGVITEFNSGAEKLLGYSAQEL
VGKETPLKFHSEKEIQARAQRLSEALKRPVKGFQVFTEKLKEDSPQDHEW
TYARKDGVLVPVSLIVTPILDENHQKVGYLGVAQDVTELRRSQQALIEAR
NQLEATLDTIPDLLFEVDKEGCILNFHTADIEKLYLKPEQFVGKRVNEVL
PDSVGDVIFQAMAEALETGRSQGLEYSLAQNGKQSCYELSVSTKINQKNE
VVSFLFLARDVTARVQQSKELVEKDERLELILSASKIGQWDWDIESNVML
WDERSCTMLGYPPEAFKMDYDKWASLLHPDDAYVMKRLKAHLEKGEAYSV
EYRIRSGDDDWVWVESQGQTIESDAKGRPIRMVGIYMDITDRKRSEDLLV
ENEERLRTIFEILPIGITLTDREGQIVECNSASEVLLGIPREEHLARKYD
AKEWTIYRADGTAMPSEEYAAVRSLTNQETIKNQVMKVCHSGDCTWLNVS
ATPLNHPNYGVVVTYIDISDKRQAEERLNLAASVFTHAREGIMITDKHAR
ILDVNKGFTQITGYEREEVLGLNPNILNSGCQSKEFYNLMWKTLFEEGHW
SGEIWNRNKNGTVYPQMITITAIKNSDGMTQNYLALFTDITSLKEQQRQL
EHIAHYDALTQLPNRSLLADRLQQAIFASQRHNSLLAVLFIDLDGFKKVN
DLHGHDAGDELLVELSKRMKNILREEDTLARIGGDEFIVVLVNLDAPSDC
EMILRRLLESTSESVDIEGEVVSVSASIGVTFYPKDNVDADLLMRHADQA
MYQAKQSGKNRYHYFDVQMDSMLQSQSAIQNEIQDALNKGEFELYYQPKV
NLAQNIVIGVEALIRWNHPKKGLLVPIEFLPFIENHPFSVELDQWVMETA
LKQMSEWRAQSLEMSISVNVSAYFLQQKNFIQILERLLSQYSDLPKFSLE
IEVLETTALENISNISDLVHICRDMGVNFALDDFGTGYSSLMYLRHLPAR
TIKIDKSFVRDMLVDMDDRAIIDGILKLASVFNREVIAEGVETVAHFEAL
LDMGCEQVQGYGIARPMPADQVSDWVLNWKGHDVFSAEQ
>Tcr_1670 putative signal transduction protein
MSAVQDVQEKKQAKPNVSRVILERLKVLDDLPRFPNALMKLEQMLSSNKD
VHLDEVAALVAQDPRLTAGIIGAVNSARYSPGYNITNIEEAVQRLGTQDV
RMMAHAINYQSTVKTKPPFSEKEFMRHAMLSAFIAQALAKAVHFDQGEAF
LCGLMHDLGAYLLAIESRDKYKQVMQDSAGDAAFFVQAEQSVFGTNHAVL
GGRLLQQWRFPKEVVMGVALHHAPHTAPEEFQNYAYLTYLAEQGAFFGGL
TNGVVTHKGDIPTDTLLNGLDYFGLTLEHYNDLVLSATELAKESSLI
>Tcr_1773 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MHKNSNKFINYLVIGYSFVIILVTISAGIFFNYEQKISHAFQTYSENNAF
QNHIDALFNSATQRSILMVRMINTEDIFEIDELHLQMFAHEQNVIQNLVA
LRKNTVREDQRTLLTKAGEVMTQNRAYQESVYNLLMENKKQAALNQLVDV
TLPLQKQVISILNQLKKGYTAEIKRSQERFAFLISEMRNLILLVAIPILL
SIFVIGMMSIRRLRRFANTQQELLENLEDRVNKRTHELLLDRNLMQNLNE
AIGIFDENDQLHISNKKLTELRLSNNLDNSHSVWELLSKAFLNLDINAIQ
HKLATRGAWRGEAALTNHTQQYLIIDIAKVQDSSLPGIYYSIILTDITEL
KGIQNQLEFTANYDVVTQLPNRYSFNYEIYNLIQKSPNVPFHLFYLDLND
FKWVNDHLGHAVGDEFLWEAGLAFKQALPPDQFIARLGGDEFAIIIQKPM
QPVELTQLANQLLSKLKTVNQKQNTGHEVGCSIGISSYPEHGNTPEMLLK
HADYAMYCAKKDGDLPYYLFSQEMNEQLSYLHEIEESLHIAVREKQFQVH
YQPQYNLHTLELVGAEALVRWPRTNRMVSPGEFIPLAEKFGLINQIGEFV
FDTAVKQINSWSNCKIALPRVAINTSSTQLLTGNFGAFVEHTLSENHLAA
DRIDIEVTESVMMKNIEHNGAGENDTSCLSILQEKGLEISIDDFGTGYSS
LSYIKHLNVDRIKIDKSFIDDIEFKPEARSIVKAIINMGHSLGLKVLAEG
IETPNQLDILKSLNCDEGQGFLFSKPLNAEKFEMKCLS
>Tcr_0570 methyl-accepting chemotaxis sensory transducer
MEKFLQKLTIKQKMRFGFGVIWTVLAIITIQAAVNLFIVRENVKEVVEVK
QPIALQANEMANVLEKSMNALSMYMLTNDPENLKSYAKGIENSEEILAKL
NAKISANQSKEDAEVLDRILNDLSQLPTFIEQVKVLQSDRSKKFPAFEFV
NREMMPSAVLIQQQIGLMIDSELVDLNSHRKPILDALLNLQKDWLNVLSG
LRGYVAFRNESMAADTENYLNAVERGLEYLATQSQFELTLEEEDGVEKTR
AAYERYRENFMALKRIHQGPKWRMDTWLMENKIKPLFNSLETDLEHISES
SVTQMQETSQDVVDSTLRNLILLLSLSVFGQLIGMIISRKVTNSVVKPVI
RSANAMKDIAYGEGDLTRRLHADGKDELADLARYFNEFISKIQSTLKEVT
ETVSELEVSSRGLLEVTHETKEGVEQQLEASQRLSRSMITMSEKAKSVED
HSHNTSRATDQAAERVKEGGEVVQGAAQNIRNISDGMEKITQAVMQLNDD
SQTISTVINVIREIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLA
QRTQESTVQIERVIEKIRKATHETVKVVEVGRETTQAGYDSVMKVERVLS
PVVILMDDINKMSSEMLTSAQSQTSLAVEVNEHINQIHGVTQKTVEGAGN
TESSSNRLQQLADKLDRLVHQFKI
>Tcr_1937 diguanylate cyclase (GGDEF domain)
MIFKRGLIGIVWLCMGWSIFLSNAAYADHPSKLNESALEKVTLQLKWHHQ
FQFAGYYAAQKEGYYQAEGLDVDIQPRDLHENNIQQVIDNKAQYGVADSI
LLLYQAKKAPLVIVAPIFQHSPQVLFTLASSGIDSPYKLKNKKIALYQKD
TDGFSVLAMLHEVGVSPTVERTIKSDASMLVQNQVDAYAGYLTNEAYTFH
ENNIPINVINPLNYGIDLYGDMLFTSQKEVSQHPERVEKMRRATLKGWRY
AMAHKTEMAHYIQSHYQMKKSFKHLMYEANAIENVMSLSTTPIGTLDEGR
LQFIANLFQKHGLIDNKVNLKSGVYRSGQKEIEFTAAEKKWLNEHPVVNL
AIDRFYAPVEFVNNQGQYAGIAKDIFQVIEQKTGIEFKPAMHLRWPEAVE
SMKQKKLDVFSAVIETEERKDYVNFTMPYFKLPMAIATRESAPYIADSKQ
LSGKVICVVRDYASHAKLKRFYPNLPLLLVDTPKEGIEAVANGKAYGYVD
NVAVIGHHIKNSGLANVKISGEMPFRADIAIAVRDDWPELHSIIQKVLQQ
IPPETYAEISNKWLQVSYQKQYNWQQMTIVLAPILLLLGVFAFFNRKLRQ
TQKKLQETNKQLSILSVTDHLTGVYNRQYLDQRLDSEVERVNRYGSTFSV
IMMDLDNFKKVNDKFGHLVGDEVLVVFAQTVEKEIRKIDIFGRWGGEEFI
LICPETPLTHAIQLGKKVRKSIESQDYPENISQTVSLGVAEYQTGEAIND
CLNRADQNLYKAKQLGRNQVCPGLD
>Tcr_0397 diguanylate cyclase (GGDEF domain)
MNDLFKSSFNGPSWNLMTSSSNLTQKTFWLNFIGIYLLLLAVLGFLISSW
YSLKSTQELELIKLNQSQVVSRAKSIMLEEYESMLSDLLTLASLPLHSHS
RNTTSEHRFKQDLASTYLVLSQTRGRYDQIRYIDKEGMEKVRVDYNDGTP
SLTPQSQLQNKKTRYYFQDINQLSPKEIYISRFDLNIEQGKIEQPYKPII
RMGKAIFNERGQRQGILLLNYLGKVLLSKLNRLRQSEGSQLMIVDQMGYW
LKHPNPDKEWGFMFQDKQNQTFAAAHPKLWQTMLTQHSGQITTPQGLYSF
ESVFPLKSESISELGHYQLRDKQFSTQADLKNYQWLLISYTPRTYFTQKL
KNQLQNMASLLIGIIVLMGGIAFLFASNRHQKQLLQQKARYLAYHDSLTG
LYNRYALTQTEGQHNLLANKSDNDSYSVFFLDLDGFKPINDTYGHQVGDQ
VLQTIASRLKNTVRKEDIVVRVGGDEFAIITYHTVDRVAIQIFGDRLIKA
IEKPIQLDDKTLHLGTSIGVASYPQNGDTLNQLIDLADAAMYKAKKSGKG
KLCFA
>Tcr_1669 putative signal transduction protein
MKRHVSKYKVTSADVIDALAEVKRLPTFSKILTEFDRLVGQPEGTHVDEV
ADLLKSDPRMMAGVIKTANSAKYAPSGKRVTEVAKAVYLLGVKDVRIMIV
ALSFLDMCQSKVSLNETDFLKHSMVSAFIAQSLAPYFKVNEYDAFLMGLL
HDIGVFLLATYSTEGIKEVEKVSLGRATHLVSAERSVFGLSHSSVGARII
QNWELPQSIVMGVLGHNSPERIERVFQKNAYLTLLSEAGAFYLGLSNGLV
ASEAGVLGERSLAILKRIDLPEADFKLMIEGALEDATQIGLF
>Tcr_0555 putative signal transduction protein
MPSNKKNGSPSLENDVEEKRQHPRYRRNFKIILNDTPFNGYDISLGGISF
TTEEPAPNISSGKIFSNVQITGTKGDPYKIDAIVISSYRKKNGYHFYGAR
IVNMPEHSLPMHEDLTLGKQDIENLLSDTCGAEKAPISVHLENRINTAIE
LLRKVYVYHLPPELLMIKEELYSANPNLSKVEDLIKKSPETLAEFIKIAR
EAYPKKSIDQLMKVRTILNLIGLDNVFDLFCAAILVRQHNNSPLENAIMM
HGMNAALAAAELSESVEGISRSEAYLGGLLQNIGAVFLSKIDPIGYKPIF
LRSLSRPYAARKQELDLFDTSHSEAGVVIAKNWGMIPEIYKGILLHHSRH
ITSEIKQTHSKICDMALLMMLSDFVACSAMGQTYVSEELKHSRDYALSHL
TINQADVKAAYTMVITTGHKAAKITRI
>Tcr_0861 diguanylate cyclase (GGDEF domain)
MSIKQYFFKTDYRFVFLIPVYFLTVAVFAAIAFFNQEWPLFSVLSAFALT
IFLFGIYIIKRGLTLLSKVIMLLVNTIFVIFLVVHGGHEHTGYFWVFPIL
LATIQILGAASGILFACLLVLMIWLLEKWGMTDLALPSRFYFASLALVFI
SGVHEMALENNRKKLKKQVDDKDNENRLDPLTKVGNRRLVDYELDRMNTQ
IMDGVAVGALIVDLDNFKKVNDSLGHSAGDEVLKTIADHLTSCIRPSDKV
ARWGGDEFMVLLYGISLADMERVARRIQESIINDERLESLDVSVSMGGAI
TSSDYSDLFKAADKNLLSIKNHTKNSFKITML
>Tcr_0776 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MLTGALITALAIFSITMFAASQIFIESLSTQSEKNATTLSQLSFDNMYQI
MSKGWSREQLLDFRQDLKRTYKEQNLEFSMYRADIVNQQFGFLASDVNDD
MRPLFQEVLLSKEKKVIEKNNHIRILKPLQARDTCLKCHTLAQKGDVLGI
MGIEQNVGDVMRSARNEFLLLMLILTPIPVVLALWVGKRFSRSLVKSVDE
LDNQIVSIQQIDDLKKFAHGRSVFDYEEFDQLNRSLNQLGDKIKHIAIDR
DILDFEIQLLDKLVLSSELIKDWKQHICLLMNEINHILPLYTMFVVFRTD
DAEQYVIEVFWLGHPSQEAQEELEVHAKELLDRVSIFEKGSVFNVHHTYA
SHEPLDIKSAIQTQSKSLILDTPKIGGVVGLGVETFPPKESSRSVVVESI
LTTLVNVIGSIKAINKFTKELEYYATRDPLTHLFNQRVFHELLAYEVTRA
HAHRYSFGLLMIDFDNFKLINDQYGHAFGDEVLQAFANAIQQVLREGDIF
ARYGGDEFCVILPESQMDDVKSMSYKILNATSDLKMIEPKGSVVTMTCSV
GVSLYPDHAKDKEDLFMVADNMLYRVKDNGKNSLSYPEEEDLVEVYKESN
DQSLFIMHSLETGEPIEPHYQPIICMETGEIAVHELLMRLRQNGELISAS
RFIETAEHMGLVNQMDLVLIDKALAQVQISDYRGLVFINLSPKAIVASEF
IAKIKGLTEKYEVHHERIVFEITERETVHNIALLEKFVRELRSEGFRFAI
DDFGSGFSSFQYLKRFPVDFIKIEGEFINNMSKNKIDLAFVESAVSMATS
LGIKTIAEFIENKETLLLVKQLGIDYAQGFLLATPQPEFLNELNADLVSL
IQQEETKPKKDHTY
>Tcr_0548 BolA-like protein
MSLQQQIENKITGAFDVIFMQMENESHMHSGPAEESHFKLTLVSPAFEGM
NKVKRHQAVYKALTEEMPLFHALALHTYSPSEWEQNPTVVDSPLCQGGSK
A
>Tcr_1225 anti-sigm factor, ChrR
MSNRSEALNMDFTQKVVVETEKMDWVGSRADNVLRKPLEREFAESGRATS
IVQFLPGASFPPHQHDLGEEIFVLEGVFSDENGDYPAGTYLRNPPGSIHS
PHSKEGCVIFVKLEQFSPEDTEQVVLNTNQAIMQPGIGNLEVLSLHSFQT
EHSALVYWPPGEKFQPHHHWGGEEIFVLKGEFIDEHGRYPRGTWIRSPHL
SLHDPYVEEETLIYVKTGHL
>Tcr_0021 diguanylate cyclase
MIKPILFNTNNLLTISAFILVLFLVSILVFSAKQLTNNTLEHTSQIIVSQ
YKKLHNLLNLHIHGQKRTIQLERIYLQEDPFEKDAALMDFYRDGGNYMIY
RNQLALLVSDNPAETKWLEEMNALARVTSPIQERVAQLGMKGDEEKGREL
LMNQALPRLEKFSQRVNEFSLFQAQEMKNLIADSKVRVDKLMHNIVTVAG
LLILVSLAFAMMVTRKFNHINQQLKISNGTLEKEVRSRTQKLSQAREDLL
HKNKILEQLSTTDPLTQLCNRLKIERVLEDLHQKYEDEQQIYSLLLIDID
CFKKVNDTYGHTVGDEVLKELSERLKQSFTQHGHIGRWGGEEFIVILENE
TLEQAVVAAETFRQKTENTSFIEVGNLTVSIGVATVTSAQTISELIHSAD
LGLYESKHAGRNRVTVYSNGDSA
>Tcr_0116 hypothetical protein
MSMDIIKPTGFRKFAFKKFIWVSIASILASLAVTTLVSAIYLGFAYLQAT
DKVHSELDTVLTQLQKANGNPTKIETLLMQVKPAQTQSTYHFVGGGISHY
DMTIINKPSTKFAKLARTIEADRTPVQLFDVKHSALLGGVPLYYSSNCKT
CELSDPQGKFIGSLLYERGIISPIFGTSIFGVFLLIFILNFFVIGVYMMT
RTLEQDFIQPLKKLSQRIDHVRLDEDDMVWQRQPQKIAEIDMIDEMLTEH
IQMLKAVHEKLDALMVTEHESGFFHQDRFKESLQFEIFRSERYKRPLSLI
VIKLIKIISASSNHEVSVAEKIHVFADLINHTTRNVDMPFRVRDQLFVIL
MPEIDENDIRIVARKYYERFSQPSHTAADESASFNFKIEIGYASYGYDAT
TANELMHAALERLTEDPATEGEI
>Tcr_1062 diguanylate cyclase (GGDEF domain)
MHLFMFKIFSFLFLLMGVAFQANAVAPVDISQPQYQIGKSVLFLEDARHT
LSFSEIEKVPDSEFESVDKNIFSYLFTHSTFYYKFQVKNPQPKAVERLLV
FETAWLDFIQVKVISPDQSQQRSLTGNLFPFKQRAAEHPYPNVEHRFEPG
ISTVYVQVKTRDPFIVPISILDTESLFKNYTSIFATSMFIYGIIIAMILY
HFILFASIQLRYYAYYVLYLTSFLAMNVSYNGYTFQFLLQDFPVIQNWIQ
ATTIFLFAIAGLLFAKAFLNLKRYIPLAHTLTKAMIWVFVSVMVISALFG
YHEHVMFAIGMSVLFSLFVFTIALLSYLKGNKTARFFLLGTTAGLIGTSV
TALTVMAIIPYSHLGYQAVDYGLAIDSILLSFALVDRVKSTEKDKLQAEA
SANTDALTNVANRRAFNHFCEHLAFDSQNFYQGKLVALMLDIDFFKEIND
SFGHSVGDIVLQKVASLLRNNTKSADKIFRMGGEEFLVLLLDTELEDAQK
VAERIRAAIEEMETHKENKTISITVSIGMADFLPEDVSLLSTIQLADKAL
YEAKRSGRNKVVLAVR
>Tcr_2189 periplasmic sensor signal transduction histidine kinase
MPIFLSRLKALFRQVNLPWVGSLYQWMLASFMLVSVPLIFAIVYALMAMD
NYSKQAHKSVFQTIVVTENSRLVLERLVSMERSIRQYQVLKETSLLEAFL
THHQKLVGLINESQSEHLPANLNSQLQQLKQHEAALFQVITSKENGKALS
EEVLSQFADLAQQARKIIELGSKQQSLEVIALSEYESQVRQRLFFIVLAS
ALLALVLSVFFVHYITRPIKKTRMQIQRLVKEDFETPIVIKGPRDLQELG
DNLEGLRQELKHLENEKQQFIRNISHELKTPLATLKEGTDLLSEELIGTL
NAEQKEIVELMQVGNFNIMGLVANLLEYQKAVSTQSTLDNRFFALSDLVT
SLQQEYQLLLQSKQLDLNLSLPEITLYADYEKLKVVLSNFISNAIKFSPQ
GGRVSISAEVSDNTLQLIIEDQGPGISEEIHQLIFEDFFQGQLQPASTMK
GTGLGLAIVGYYVEQHNGEVLLLPPNETYSGARFVLVLPLEQKK
>Tcr_1151 response regulator receiver (CheY-like) and ANTAR domain protein
MAAANEPIKVMLVDDDSARAALLSQALQDHGYEVVARVEPGPSLLSKVAK
VLPDMIVIDTDSPDRDILESMSLLNEHNPMPVVMFSDVEDETVIQEAIRS
GVSGYIAKGVDQQRVKSIMNVAIARFREYQALKNELKQTKDELESKKLID
QAKHLLMSQKGVSEQEAYEAMRKMSMDRNIRMAEVAENIISVLEW
>Tcr_1089 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MTGLVVGLFSFGLSYFEQKEVLKETRLQEMQQRLVELQGTINDFNRRENH
RAITREVSRLTSNKNLQLILIVGADGFIYHASRPALRNASLSSQPNVLNT
LQELDSAQPGKVWLTSDDSAVIGAFPIEPLPLKKVSQVLNSAYLYAEFDL
SHDIELLQYRHQQELFYTWGVLLIILSIGFSALYFDFKQKIRQILTGTKK
LTHGQYDYRINLKEKNEFGLIAKSIDRMAASLESKTKQLTVLAEQDSLTG
LTNRYKFYRLLEKRIHAYPDKMFALLFIDLDRFKIINDTLGHQTGDEYLK
VIGQRLLKNTSSQDIVSRFGGDEFVLCLESASSKTQIQTQTESLLKDLSK
QVEVNGQNLFTSASVGISLFPQDGRTIHELIKAADIAMYQVKSQDAVAIS
FYQESFDHNTLNYLSFRTYIKNSIEAGEVYPLFQPQVDVRTQQIVGFEAL
ARMKDETGNWISPAQFIPVIEENGWMVEFSSVMYRNALSEFQEWVQNQQP
ERLPSLSLNLSIMQINHKDFLSNLDHLLTQFKAISSCLELEITEGIFIGN
IESKLPILAAIKARGIQIAIDDFGTGYSSLSYLKKLPLDRLKIDQSFVRD
IDIDLNDNAIVETIIAMASKLGLEVVSEGVETEQQLSFLKAHDCHIIQGF
LTGHPGPLPYSKHSKVA
>Tcr_1920 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MGIHSILISPCLRGFILLVSFSFSLNGQAALQSKTPSSSLTPLTVQVNWN
HQFQFAGFYAAIKQGYYQEAGLRVTMKNWHPRMRLVDEVVSGRADIGIGY
SSMIADYAKGAPIKLIMSSFQFSPMVLLSHQPINDLAELDGKTVMHYGNL
QILGLINKAQNLVKNPVVSVDSSGKLDDFIHHKVDLYGAYMTNEPFRLKQ
RKKAFFIVDPKSFGVQSYGDLVITSESLAARHPDDIQKFKAATVKGWRYA
IHHQTEMVDYIMEHYAVVKSREALLNEAKVTTQYVQSGLIPIGEVEPAKL
MATAAGAKDVGLISQKEFNQLNMKQFIFNASQYAYTEEELAYLASHPVIK
LANDIDWEPFEFIDKEGHYRGIAADYFALLGQKLGVRFEAQKSLGWAEVL
SKTKAGQLDIFSCAVATPEREQYMRFTKPYLSFPMVLAGRKNVSFIESYD
TLKGEKVAVVKGYWSHETLTQHYPSIQLVIVNSVKEGLEAVMDGRAKVYS
GNLGAINYAIHKYGVTGLHVVGQSSHRFELAIGVTKDDPVLFSILQKGLA
SITEEERQQIFNKWIQLEVVNKLDRKQLIEIGGLAFVIIVTLLFFLLMFR
YQKNRQKAYIEKIHELTYATLINMENFKFDWVSDAFTRLSGYSREELGSM
RYLDLATETLSQEEQETILKQVTAGKTWKGEMEGRAKDGHSYWIELTLTP
VQNVMGHIKQVWATRVDITDRKRNEHLSITDDLTGLYNRRYFNQVIEREI
NRAKREQRSLAIAMMDIDFFKKINDTYGHQEGDQVLKQVATVFESSFHRA
TDFVFRMGGEEFLVISLFKSEAEFQTYLEQLCLKVKSLGIENAASSEGVL
TISVGAIYCESDALTNSEKLYKVVDQRLYQAKQTGRNKVVMTD
>Tcr_1377 diguanylate cyclase (GGDEF domain)
MAFLKHYTWLLGLTAFAVWQMPNILTWPLSTQKLLPWLPYVIAGLGVFVG
IFLNRLQPILILLSLVCFNIGMQYFIPAGSTGLSAVTLFPVLAILLPLNL
LLWLLFPERGIHDKVYTIFQLALLVGQVYLVYWVMENLPLTYWQWISQNI
SIDGLNLSTAALIAMVSVWLILMLRNALLSQPKVLDRTVVFVLFLMGFGL
NAFYQFGSIAWVSSFAATMLLLSLIFDAHHIAYTDQLTGLNGRRALLESF
LGLGRKYSIAMMDIDHFKSFNDTYGHDVGDAVLRTVAYELSLISTGQVYR
YGGEEFTVVFKGKQAQQVKPALEAVRYAIENRVLEVEKQGQPVETKVTVS
FGLAERNDQFKKPEEVMKAADEALYQAKKSGRNRIVVEGESPKTTPKTTR
PGRKSVKKKGV
>Tcr_0165 Hpt domain protein
MSDPVNTENLSQLKTLIGEDLKDILQTFLEIAPETLNGIKVAIIEEDASA
LRHQAHTLKGSSANIGATTLPALCLALENKGKEGITQGQEILLKQVEDET
DKVIRFLQHSINHFSQL
>Tcr_0106 serine/threonine protein kinase
MPQSDTAKNLIEQSDLSHVKLVGESPSIWTFQAIQTIEGYQKKQLIRVNT
DIRNHFAVQREKDLLHYLNQFEDDFPRFNEIRKQGFAYLSFFDYVGKKSL
KQKVKKSGTLSLKKAKQLLSNLIATLEHAHNVGFVHTQLSPENIIVGKSR
FYLVGWNNAIPSLSSFESELLLGDQQYCPPERLNGEYSDAGDIYNLGCTL
YFALTGKHIYRLNKVEHLFDQLYAHAFHTPRKLHSLPIFWRQLIVWMTQK
DPQKRPGLAELKQWVLDESVPKSIREQSFKPNKKFPKDCLTALADSHFLY
ALFKKASLYESSGDSERAFNLYESCAFREYTRAENNLGLMYEKGTVIHQS
YLKAMNMYHHAFKKGNPFAAYNLARLFENGLGAEQNLVQAFKLYQFSAKR
GHLAAQNKLGELYREGRGVEKDVVQARFWFGMAAHYGNPVARLNIKKSLA
SSHG
>Tcr_0755 CheW protein
MSADVEAIQEQIEHNEGSDDQILSFILGGEEYGVDILRVQEIKGWERTTT
IPNAPDYVKGVINLRGAVVPVVDLRIRFGLKDITYDESTVVIILRATDAS
SNTQKIIGVVVDGVSDVHAIDLGSLQASPEINGTIHTEYVKGLATVTEKM
VIVLHVDELVSSGILSEIKKSLNIDE
>Tcr_0753 hypothetical protein
MSENTIELPENLTIHHIEEEFGNLKIAFQSDAETYKLVAGNVESIDTSGL
QALLALIKSAMANQKKIQWDSPTDTLKMGAEKLGLTEKLGLTS
>Tcr_0457 diguanylate cyclase (GGDEF domain)
MNSSQLIQSPCRYSFSKEEARELAEQTLEKLNHHDISANPIHFTLFFELL
TSINPSIAEQVEHALQFKTYNDDSARVMFNALWSEIISHSLHSEEFSEIV
DNLILYIDNWIKAAQNKSDTISAEVEKVSQLSTAQEMIDRLKSNVLPAIA
SYQSETNALQEQIQDSSAEIMRLKKELDKATAIAKTDELTNIPNRRGFNE
IIENMMKEANEKQSSFALLVLDIDFFKKVNDTYGHLVGDSILRYLAKSLH
NETKGKDSIARIGGEEFVAILPSTSYDSALKLANTIREKIASRPLHVKNN
ANPITLTISIGVAMFQLNETLDSLFTRADKCLYMAKSNGRNRVYGEAEL
>Tcr_1487 transcriptional regulator, Crp/Fnr family
MTEKHSGFNASCAKCALQTICFANGLYETDLDRLDQLVDRLPSISKGEYL
YSAGDDFSCLYALRAGIVKLISFSEDESEVIHGFYLPGDIVGMEAMAYDA
HEFYAVALDTTTVCALPYGQLASLSSEVPHLNSQMFSLMSREIMSSRLHS
TILTQKTAEQRLADFILLMSTKYKSRGYEHRQFRLNILHRDVANFLNLTP
ETVSRILGKFQKEALMTWKKKEVIIENELALRELANGQIE
>Tcr_1929 HPP
MKPSKLHSFIAFLGINRTQASHHEKFISALGGFLSILLILLISRSFLELS
ASVALVASMGASAVLLFAVPHGPLSQPWPLIGGNLISAFIGVSCALLIDP
PILAASTAVGLAILAMYYFKCIHPPGGATALTAAIGGESVHALGYQFIVT
PVLLNVLCILTIAIIFNALFHWRRYPAYLQQASYSATGTPSHENLSHEDF
IHALKEIDSFVDINEHDLKRIFELANLNANAIHLDPEDIQLGEVYSNGKL
GKDWSMRQIIDESRSDNPAKDYVIFKQIAGQEKKTSDCITRAEFARWAQY
PMVKENGLWHRKSAPNQSTTGVE
>Tcr_0122 diguanylate phosphodiesterase (EAL domain)
MSSLVDIYIGRQPIFDHSADVWAYELLFRSGDGQNSAQISGGDHATAQVM
LNLFGDMGLKNVVGDHKAFINFTEGLLLNENQPFFPHNQVVIEVLEDVKV
SSEMIESLKKLRKLGYKIALDDYIFNPELAEFETCADFIKVDILEVGPKQ
LKEHIGRLKDQGIKLLAEKVETREQFEFCKKIGFDLFQGYFFAKPQILKG
RTLPSNKLAIIQLLSHVYDPDIDMSVLSATIGQDIALCQKLLKFVSAVDS
RTQLSSIHDAVMRFGLKRLQSWASMLVLSKADDKPMELFKTSLIRAKFCE
LVGIAVGDHSKDSYFTVGLFSTLDALMDTPLQELLAELNFDDTIKRALLE
QSGSLGVTLVAAKGIERGRTDFALPQGISASELSKFYLEAMEFANKLDLS
>Tcr_1714 UspA
MHHYQTVLVAVDFSQHSDQAIARAKQLAAMYGAELHLLHVIEEPMYPVYD
DISLTATPNAWFPDILESLQKAATQKLHHLAETNQIPTTACHIVTGFPKA
QIVDYANQIQADLIVMGRHGMSFFDKLIGSTTDNVLHQAHCDVMTVTLDS
>Tcr_0858 putative prophage repressor
MTEKNTTAGGARKGAGRKKGSGKFGEDTKVIRVPESKVTVVKHWLSEQAE
AEQQQKTLQEAQALAGDKLQIQLPEFNEEVLLPLHSHKVVAGFPSPADDY
VETRLDLNDKLIQNKQATFLLTVQGDSMKKAGIQDGDILVVDRSLTPQDG
KIVIAALDGELTVKTLSIKSTGTWLVPENDNYPPIPVREESDIVIWGVVT
ATIKQF
>Tcr_0005 periplasmic sensor signal transduction histidine kinase
MKSIEKQLNWSLSLSILLVFFVFWWISVFTIHHLTEDYILTRLQHDTVSI
EKHLNRASTGQSLPKIDYDAINPIYAQPYSGHYFVIHLGHHTLKSRSLQG
YPLFLKSSPDKISHYETKGPFESTILVRRFKTIYQQQPMTLYVAEDHSPI
QRTLMVFDIMIGIFALMTLLLLYWGQKTLLRKGFKQLDPIHAALKNLHKG
EASQLEVEDYPMEVSELIQNLNQAMISASHQLQQSRQSNANLAHSLKTPL
NMIYQLLDDAALNDHPDLQNTLRQQAKKIHNRIESELKKARLASSNLSVQ
PFSLLKDLPDLTQSIQQLYPDKRLHLHKETNTPETLPIEKEDGYELLGNL
LDNAAKFGQANLYMTFSSHLNHNTGQPHPIVIIEDDGPGVPTEKIAEIQT
RGHRLDESIAGHGIGLSIVQQTAHAYAIGLQFGASEKGGLKVTLTF
>Tcr_1041 PAS/PAC sensor signal transduction histidine kinase
MSFSQQNVLALTKEPYFLTYFEQNNSDNLTVCDNLSDLVDRVKSAADDKH
PYHFVFMDESMLSKSDVESILNQLHKINSALFYLISCTDLNEEWLNKLQK
TTRNQVIFVDEKPAYALLKQAEMQIVRLADLQLTIVKKSDQFKTVQQKLA
VRDKLFNNLLSVIKFDSEGNIISINPHGTTEMGWRNAEVLGMSIHDIVLW
SNDGSGIVQYFETFSGETRYFDNEGKQRWAFAQVKKVKEHNRNYFYFIGK
DITEQKQFARRLQYENYQEGILKAKSDLIHDIGNTLNSMNATYGVLASGV
EQLKGVANYIERWCEEKQSLSLPVETSYHFIEAIENSCHFILDKHFSKTT
LALKNDLALLIDAVGTKQQILPVENAKEVINVYNLIQEVILSSQALLNEK
QISIQLLDANPSIFLKLSHNQLFQALLNLIKNAVEAIEASDKTTRQITLQ
ACQTEEAILLMVQDSGKGVESLDLKKIFNYGYTTKEGGSGHGLHSVANFM
NKNGGKVEVASSKEGGARFTLTFPISLSEI
>Tcr_2004 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
MFHQKIKQTLKACEQENSALQGVVQAINRSMAMIVFTPQGEILDANENFL
NAVGFSLQDLKGQHHRLLVPEEIKQSSEYQQFWQKLAQGEYFQDRFLRQD
AQGNTIWLEANYNPVFDENGRVIQVIKFATDITEQVEQEAKIAAKLEAID
NSMAVIEFDLDGHILEANENFCKTMGYDLSEIKGQHHRLFVEPSYAQSPA
YASFWQALKNGEAQIGTFERFDKNHNPIWLEANYNPVYNQEGELTGFVKF
ATDVSTNKSTLLLTTVVADAVSVLDEFSQGNITARMKNHLDDANKTMFDD
SIGRLSHGFEIVADRLGEVVATALNASETVSSAAHEVSEGSAALNQQVQE
QAAALEETSATMEEMNSAVQNNTDNAQETAKVASDVQLKAEEGANVMQQT
IDAMNAIQASSHKIADIVTLIDGIAFQTNLLALNAAVEAARAGDHGRGFA
VVAGEVRALAQKSAEAARDIKKLIDESVERIDIGTGLASNSGDMLQGIHQ
SVDRVAEMIEQIATASVQQAQGINQVRQSIAQIESVTQQNAALVEETNAS
SESLSYQAQVLQKDMSFFTVSPQLAAPDSMMSDMNRMKRIA
>Tcr_2187 two component, sigma54 specific, transcriptional regulator, Fis family
MTASPDKSAATFEGQKILLVDDDTSLLKLLSIRLRSFGLTVETVEGAAEA
LAKLPTFQPHLVLTDLRMSEMDGLALYEQIHQQSPTLPVIIMTAHGTIKE
AVEATSLGVFGFITKPINHAELTQKIQQALTVHHPVMATEKQAKWRHNII
GQSQVMEALLQDLYHVAQSDISVYIQGESGTGKELIAQAIHAASPRHKKP
FIAVNCSAIPEDLLESELFGHKRGAFSGAVENRKGLFELADGGVLFLDEI
GDMSPAFQVKLLRALQENEIRPVGADKTVSIDVRVVSASHKDLKQLVEEK
AFRLDLYYRLNIVTLKLPTLKQRPEDIPLLASYFISQQRGKAKKLSNEAM
ELLLGYDWPGNIRELKNVIEQVCTFATAPLIPASLIEKALQQENLTMVSL
QEAKLNFERDYLIRVLKLVGGNVSHAARIAQRNRTEFYRLLDRHQLKPAE
FKQKSQ
>Tcr_1934 hypothetical protein
MKLKRSSLAAPILVTLMTITTMPLATAANNDASFDQVQKESRELMQSLKS
YSAKQKEEAVQATQKALDKIDARIDRLEENVRTNWNEMDKATQQQTQESL
KALRKQRNKVSEWYGSLKNSSAESWDQMKKGFSEAYQSVNQAWKKSVEAF
QSED
>Tcr_1913 PAS/PAC sensor signal transduction histidine kinase
MKPETIMPNLKNDFNSKLFHHLDNLLSEIRRLDVKTTFGSDLEPFYYVLE
SLSYVSRSYGSSSFSKILKQLERLIWRPKALLSLDEKEDFMASLEGLKET
VFEPKNIQSNDVLSPRICFYGLEHEEIETVLQNTSELFLRYRVITSLEGL
KRLRSDDILVFRLTESEQQTVECIHSLTSLVFSVDQAIYLLPEENLSSRL
KLASYGVENLFIWPDEAFYFRRYFYHLYHRALPVCQPFKMLFVGTSKRSE
ELCTRLQEFGVDVCQVCDSLTVLKRLQQDTPDLVMMDAEEDCFDVPALST
AIRQLPNAKRLMVLNYQAIPERLRRFNRLAHFEADIAVSKLQTVDEACAE
VLARLAHQRDVVFLSSETDNALQKTADFKTGLDFHNIVSVTDKQGRIIEV
NDMFCRISGYPRDELLGQDHRKVNSGIHSKTFFKEMWQTISSGHAWTGEI
CNRAKNGDLYWVESSIVPILDEHGQPQKYISIRTDVTHLKQTEQRLIEAQ
SLAKMGYWEADLINGALDWSDYIYDIFGFDKAHFSPSVEAFKKAIHPDDV
ELVEASEREASISGVHDVVHRIIRPDGQIRYVHELGQGHRKNGELIRLSG
TVQDITDLKEAEAALKKSEQRLNLSQRFANIGTWDWNIKTNELFWSERIS
PLFGGEQAELEISYDSFLNAVHPDDRQKVVEAVTACIEQGTEYDIEHRVV
WKDGSVRWMHEKGDTVIGQDGSPTNMLGVVQDITRRKEAEEHLIQALERA
EKADKAKSEFLSSMSHELRTPLNSIIGFSDLLSMADLPEKEQHQVDHISE
SGHHLLALINQLLELSKIEQGEVELKMTDVVLEDTVHYCLSTVDPMAQKY
LVELERPDWKSFDYHVYADELKLKQVMLNFLSNAIKYNRPDGKVMLAATL
LETGKVRISVTDTGYGIPKDKQSNVFNSYDRLGHESSTIEGTGIGLNITQ
QLVFLMGGDIGFSSQENEGSCFWVDFPLSTIHQTGLQTKDDGEPNTVQNA
LVKVLLIDNQPQNMHVMAGLGKAGEFMMLNVAPDLTLGMEKVETFKPDVI
FIGMTLTKEEVQEAVLNLKQLSIFKVNSPYVVSINYSEVDGIDEVVSSPL
DEVEIQTLIHKVQESKAS
>Tcr_0109 diguanylate cyclase (GGDEF domain)
MRLPRLTRSIFLDQFIFMQLVGVLIGLAFPHFLVWYGFHAEEVMTVDFYI
VSQIAGQMVGLISFILISMVIRPHLKLLSHKMHEIAEGLQQKTFHEQTSR
CEEELCQIEVVSDDEIGVSAKAYNKMLEALIQAHEVERVFNRFSKVMSEN
LELSRLADETLALLIQSTNIEAGAVLVTKNGVLEVGASRGILDAESLVKH
DVINKAIKDGQQVRIELPKNIDLDGVLAQFKPSEVFIEPLEFKGTNLGVL
VAATGAMVADERTDQLVQLFSRSIGLAINNAMIHSKFQKMAAIDSLTAIY
NRRFGMDRLREDFSRAVREQSSLSLAMVDIDHFKSVNDTYGHLVGDKAIK
LIATIIKKTLREGDIVVRYGGEEFLMILHGASSTNARNVCERIRHQVKDT
FFKEGNQQIQLTVSIGIAAYPEQQAGDEMALIHMADQALYYAKEGGRNRV
VPFRKVNEEVA
>Tcr_1851 diguanylate cyclase (GGDEF domain)
MPHFTQFFNQRLFILSALFILMALPVIYFLYQWQIETARNQEFQFYRSNL
TEKVDVLIQEKQSTTHALVVAMTSPPDFKQALLKNDSSIQQELEHYSERL
KTLTKYKGVWIQLIDANGISIARSWTKKHGDDLSKVRQDVAALIQDPRRM
NNFSVGKFALTFKSMVPLFDDNNKFIGLVDVISQVNSIDKALAETNGVHS
VVLVSKRYRKQLINAFTGKFIDDYYVANSDADTRDMALIKKIGVDKVFSS
SNYVLFENQLMVTRPIYDIHGQPMATWVTLKPLEDFSFVNVQKTQRQFIV
ITVFIFALLLMLLAMMYFKRQAEFEKRFFFEVFDTSTEIVYVSNQRRILF
ANKRFFEFFNEFETLEDFHEKYHCICELFMPEEGFLRRHINGVYWFNHVI
QNKHEPHYAKVQLNGKEYIFLVKATEISNAYGDQYVSVLMTDITEEEHYK
SQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFK
MINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLE
NALIISERIRSTVEGISSKDVPEKITISMGLVELNSWDNVQSFYKRADEA
LYKAKENGRNRIETQVEDRT
>Tcr_0969 two component transcriptional regulator, winged helix family
MTSETILIVEDEIKIANIVQEYLQDSGFKTVCIDNGSDVLSWVQNHPVDL
ILLDIMLPGKDGLQVCKEVRTISQVPIIMLTAKVEEIDRILGLELGADDY
ICKPFSPRELVARVKALLRRSSLRQENHSTEDWHMDEERYQVRYQGKTVN
LSMVEFAILKLLSTSPGRIYSRSHLIGSIYPDNRVVSDRTVDSHIKKLRH
KLAEELTSKELIYSVYGVGYKFEFHT
>Tcr_0730 positive regulator of sigma(E), RseC/MucC
MKGRNVLQTEVETESTSDAGELLAQGRVEKVEDGMAYVSTQRETGCSGCQ
TQKSCGTSVLAQLFSPKSTAPIQVINTLEAKEGDEVILSMDESQLIKHSL
MGYGLPLLGLFIGAILFKIAIASFFQVPSQDGVAIVGGVIGLLLGWGITK
KYYRPQLPVLKQIVQSS
>Tcr_0968 histidine kinase
MLEAMMWSNQYLLHNTMVKYVDKRDQLRLERLKNNIEVYMDEKGVFDTND
LDLDVWQRLLTASHRVDLTHTYIPMDILLEREYPKMLQIHPDEFESRVSL
ISKGGEVIIGPEPTKNGMEESIIVDREEVGQLGYNHRNELTEKTDVEFTE
DQSMVFTWGAVLMTGVALLLLLPFASHFLSPIQKLTLGMRKLSQGQFTTR
LQHDRKDEFGQLQQDFNYLAASLEKSQQSRNQWIADISHELRTPLTILQG
SLEAIKDGIRPASEANLQQIHEEVLWLNRLVDDLYQVTLNDIGGLNYKMN
PVDFKRIVASSVAMVDDAAQEKGLQLSMHIPEGSFKLNGDESRLQQLVTN
LLWNSIAYTDTVTDSGGPGQIRISLSRTSNNVIFSLEDSAPSVNEDEIPY
LFERLYRTEGSRSRRHGGAGLGLAIVQQIVEAHMGKVSVVPSELGGLKIS
VKLPI
>Tcr_1888 diguanylate phosphodiesterase (EAL domain)
MSEVFIGRQPILDQSMKVFAYELEFHQGLNPNQTTVAATEQLLQKTEEEI
GFQSIVGKHSALMQLPRELIAHAKLPAFDSNHRIVLEIPNDVTHDVDILK
SLKALKQEGSSIALDNFTDDESSQKLAAISDYVKIDNEACSEVKMKSMLK
SLHEKGVKVIAEKVETEEMFNYLKKMGFDYFQGYFFTNPVIMNGNKLSGN
KLTLLQLVSKINDPSTGFEELSKILSHDVALSHKLLVAVNNPAAMIPIKV
ETIADALKYMGLKRLKFWVNMMMLSDLEDTPKELLTTSLVRARFCEKLAE
KSGHSRDKDSFFLVGLFSNLGAFFRAPIGSIVEEMPLSDDIKAALVDKKG
PMGEALKCLQKLESNDASSIDLSYETVGISDIANLFMSASAWAQQATDNL
>Tcr_0751 CheW protein
MDSESNMQSTNNLLDGVITDEDDEKYVGPSIRCVMFNLDSEVYGINVKKI
REVLRVGTIRKVEGSAPSVLGVINVRGVIVTVVDTRITYGLPTKPVDDLS
RIIIVELDTDNIVGMMVDCVMEVKDIPESQFEPMSATKEGASRYLQGIAH
YNGDVIVLIDVDSMFSGQT
>Tcr_1611 hypothetical protein
MPFALGAKEVQETIMVLNLSVAQIELSISEGDNSVNTLIDSFTYMSEHIE
AIELSSQKIAEMSNDVVGIAEHNQSLLVQTNDLAQKMQQAIIAFQFYDKL
SQRLNHVSHGLSGLAEIVSHEMHAKDEAQWKAFKSEVRKGTTMREEEELF
ELIFDEKKPAEEAIEIMKTRMRDRMNAAEEVEEEIEFF
>Tcr_0135 response regulator receiver domain protein (CheY-like)
MESFKILLVEDNLVNQKVALALLEKMGYQADVTANGQEALDTLAQTPYDL
ILMDCQMPVKDGYETTRAIRALDGPLSDIPIIAMTANAMAGDDEKCYEAG
MNDYMTKPINSKLMAEKIGAFANQKNVAKTDE
>Tcr_1658 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
MASYVIGDLQGCYDELQALLAQLQYNEETDFLWFAGDIVNRGPNSLACLE
FVKRLQEQNKAQMVLGNHDFHLLAAYAGLETYVSKSDTLTEILQATQAEE
LIDWLRHQPLMVKHDFLPIAMVHAGIPPQWSISEALGHAKEVETILQSDS
WKDAIKHHLFGSDAKTWSDTLDGWERIRYIVNAFARMRYCNDKGKLDFKQ
KMSPNPNEQTKYQPWFSHSNRKNKDYEIFFGHWSTLGALDAYNIHSTDTG
CLWGGELTAYCLEDNTRHTLKCKMNCKPKKRS
>Tcr_1904 putative signal transduction protein
MQERLRAALKAIQGVKIPDLPKEIMELDAALGSKFPNNQAITDIIESNTK
LSGEVLRIVNSPVMKLKTPVKSIRESVDVLGYVNLRNLVISAAIKNLFNT
HEVEGIIEHSKDVAFCCAELSEYIADISRDEAYLLGLFHNGGCLLLATKD
SDKYEKMFSRLNTHPVSGVEKEIEIYGASHTDIGILLGQKWKLSVEMLNA
IMLHHIPENNVAKDKVRGMIAMLKVANVVVNEVSYGAYMTEEAREFMAEG
QDELMLEPSVVNQLRRVLISSS
>Tcr_1150 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MIQKKSKLKHYLKSYRIWLMFLLLFLMVPLFAITVIANHGPKMQQQTFNN
LLSVAELKSYQITNWLQEQDKVAEVISNNKLLLQYTQNILLTKQVAEQKK
NIVELFNTLQEFYHYESISLIKPNASLLLKMGDSHDLSNPKTLKIIHKSI
RTKSTVKSDMTFDSGTTSHLDIVVPLFKPSAKKDTVMALVLLHLDPNRFI
FPYLKRWPTSSQSSETLLVLQNGNRVQFLSPLRHAVNANHEGFIERSMNE
DSLPAVVALKSRQSGFIEGIDYRGVNVLAAYYPVKNTDWMIISKVDLDES
TKSLNDLVFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYAEKTEAEK
VLQKFYELPFIGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQKSFNEII
HPKDLAEVNAQLTDIESGKSEGFTTELHLLASDDSIVFGTINVKCVRGEN
GRVQYYLMTVQDVTELKHLAELNIEHQNQLNALVHTIPDLVWLKDTEGLY
LACNPSFERFFGAKEADIIGKTDYDFVDKALADFFRENDCNAMAAEESIE
NEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKRKEDEAQL
ERLTKLYSAMNHTNEAIIRSTDQLTLFSKVCEIAVREGGMKMAWIGTIDK
ETNLVHPVVRFGKNSEYLDGLEISIDETAETGQGPTALAIRQDQPYWCQD
FQADSHTQPWHERAKRFGWQSSASVPLHQNSEVIGTLNLYSDRKEAFDEP
IQHLLLEMAIDIGFALNDFYHAKERKIIEASRQEALDRLQKIADRLPGVI
YQFRLMPDGTSSFPFASDALYEIYRVKPEDVTEDSSKVFEVIHPEDVDDV
QKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEKQPDGSILWHGFI
TDISQHKKTEAQIELASKVFEQSREGIMITDSNQKILMVNEAFSEISGYS
VEETLGKTPRMLASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFP
EWLSISRGLDTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNR
ELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEV
GQRILKILRDEDTIARQGGDEFIVVLPDTGENGAVHVAEKILESISDQLN
LKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYRFFT
MEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRW
NHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIK
VAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVI
EMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDS
DDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKA
LTPEAFDAFYEKQSQK
>Tcr_0749 Chemotaxis phosphatase, CheZ
MKNIKIKQIKALLKAMEKEDYDKASQALDEIIATRDDNLLEQVEQIAQNL
HDTLEQFGADSMLLQHTKHGLPDATERLEYVIETTEEASNKTLSAAENAI
ALLETLESHVTDDSQKELIGKAQSEVTEIMMAQSFQDLTGQVLNRVIMLV
TSLEQSLMELINKSGIHIDDIPDPSDSEEERKAQEMKGIGPNVTKSSQQN
AVNSQDEVDDLLGDLGI
>Tcr_0226 multi-sensor hybrid histidine kinase
MPLRLYKESVVTHWKNGGKVFALTFLLGICLVFFFIYIYLLVDAEGKKER
IQLHNEHLSLAADTLINQWVSGMAQNVLFLAEETTSLTQNTSHINLTPLR
NLYFNFINHQKVLGQIRYINNAGQEMIRFNQTPAGLREVMSENLQDKSSR
YYFKDAVDLKDGQLAISKLDLNIENNRVEIPIKPTLRISTPIFDSEGHRM
GVLVVNFLAHDLLAKLDNLKKESQQQLWIVNQQFDWVLAPPDQMILGEQQ
GFHQDDLFAKYPELAKVLSLEDSPPSFWHEAGRLLYVHAIKLFDSPEMMQ
NEVIKNRSGMFYIISEMPDLPVWYAQLLDDDRLKQWTIQLSLLIFMFALM
LGFYANKSAYLQRHNFYQKKLFDNFFNRSPNGLFLCDQDGAIVFQNEAGQ
ILMSELALNKVYTGLQFFHKSSRRILWQQLADGNPPVQNELTMMVDRKKR
CFRVQFFLMNADVLEAPLLAVVFYEITQLVDAQQKIKDSEGQIRTLLDSA
PDAILLSDISGTIYMANKKAQQLFDMTSEEFLNATIESLVPIELREHHAV
LREKYAENPQERVMSMGTDFKAQKANGATFDAEISLSPITIKGKQHVISI
IRDITERKKLENDVRQSQKMDALGKLTGNLAHDFNNFLTTIIGNLDLSKL
LLEQPDIDKLKLEEKLNAAVSASEKASKLTRRLLTFSRQQPVSENCVLLL
PFLEEESRILAAASGKLVEFKICPRKFAWPIMVNRDELMTAMLNLLTNAK
DAMPQGGSVFIDVENFMLEDKGIDVLGGEIPVGDYVILSVSDTGTGIESK
NLNNIFEPFFTTKPKNKGTGFGLAQVFSFMKQSQGFIKLYSEEGLGTTFQ
LFFPRNESEECMKLMAGVQPEKPDFSPADMAVDDLFDASQFCILVVDDDV
SVRALAVEYLERAGYNVVMAYSADNALSVLKKHSVDLMLTDVVMPEKNGF
ELANIVESEYPDVDIVFSSGFPKDILNQARLLKNKMILLDKPYRKAHLLS
IIQSRLMLRKTTASSDNE
>Tcr_0169 GTP-binding protein TypA
MNTDHIRNIAIIAHVDHGKTTLVDQLLRQSGTFDDIRKDMGDRMMDSNDL
EKERGITILSKNTAVKWNDFRINIVDTPGHADFGGEVERILSMVDSVLLL
VDSVEGPMPQTRFVTEKALKQGLKPIVVINKIDRPGARPDWVLDQTFDLF
DRLGATDEQMDFDVIYASGLNGFAGLEEDVREGDMTPVFKIITENVPAPD
VDLGGPFQLQCISLDYDTYKGVIGTGRIKRGAVQTGMPIVIVDAEGKERK
GKMGELFGYHGLERVSVEEAHAGDIVAFTGLDPLNISDTLCDPNHVEALP
ALTVDEPTVSMTFQVNDSPFVGQDGKLLTSRQIRERLDKELLTNVALRVE
ETEDANKFRVSGRGELHLSVLIETMRREGFEMGISRPEVIFKEVDGETHE
PYENLTVDVPEEAQGAIMEKLGERKAEMQDMVPDGHGRVRIDFIIPSRGL
IGFRTEFMTATQGNGLIFSSFSHYGPKFSGTLGERNNGVLISIGQGKALA
FALFNLQDRGRLYIGHGEEVYEGMIIGLHSRANDLTVNPLKGKQLTNMRA
SGTDEALTLTPPIIFSLEQALEFIDDDELVEVTPHHVRIRKKLLTENERK
KAGRSKL
>Tcr_0653 hypothetical protein
MSDTADDLLDELSQLEDASSDMQKEVKTASDNTKKLEASGNADSLDSAAL
SLEAAKTAQLAAEQSQNAADAAIKLSHEQKAQIMELSDSNIAWRQSLRTA
TNELKSAKNAVTIMMTVAIVVSVISVSIMGWLLNSLNKKNEVLKGDVFDI
INTENTLFNKNLNLKIDQLSSLIEALAGDIQRLSRSSSQQNLSMNEEKRV
PMPATTSPKPEEPAAKPAEAAVSQESPAPAIETKTIQPDLTALKSEMKHL
SNSREEQLKHIQGLLDQILKTQEKIQATTLHQASKKQVMPATATTVVSSG
LTDEQVKKLNGIAWAVSTQRKLLKEIQATLNAQKTVKSAPNNTPKALDKI
DASLKHLSTQVRELKTQQDHIQKKVQGLENVTQELASRPQPYSYRSEVPP
VQTINE
>Tcr_1613 CheD, stimulates methylation of MCP proteins
MQKSVDPAEGITTYKILPGEFYVTKDNERIETVLGSCISACVRDPVTGVG
GMNHFMLPVDKNATGASELSDANRYGNYAMENLVNALLNAGARRERLEFK
LFGGGRIMSSTTNIGWYNIGFAFDYIYTEGFKIVSQDIGDVYPRKILYYP
NSGRVRVRRLNAMHNQSLAAEESRYINNIGSKPVEGDVELF
>Tcr_0066 periplasmic sensor hybrid histidine kinase
MSNVPLNHAIQFDQFKLVIKNSTVSSFGNIAVATFLTYLIVDALSNTLVF
FWLAYMVLVSVFRTGYGRYIRTNVSLDTFKYFQKRYFVFILLTALGWGYA
SFALFVENDTTLQSFLVMSIAGISSSSVSSLSPVKSYFYSFIIIVITPLF
LKFATSYEVYGVAFSLILLLFLIFMIKSAKHYQEAINDSLSLNYQNVGLI
KELNQAKQEADASNQLKSEFLANMSHEIRTPMNGIIGMTGLLLDTSLKKE
QRDLTLTVKESAESLLAIINDILDFSKIEAGKMELNYESVKLVPFLDGVM
EMVASSAQSKGLNLAYFIDPILPAEIETDGVRLRQVLINLLSNGIKFTDH
GYVYLTVSALDSDSNRLQFKVTDTGIGISEEGQAKLFNAFSQVDGSSMRV
FGGTGLGLTISKQILSLLGGHISVKSALGKGACFCFDIPYRVMDSNNCLA
AFEAEIPLIWLMPNDALKPKMVDFFKELNIVVHCDTFDELLEQSDENRRP
VWIDMAEVMKTGGKPFELIRALKMKHSFLTLLLTHQQANEWYQQIADLEI
NTRIKPVKYSHLSDWLFANQEEKILKETPVHSKFDASLSHLKLLLAEDNL
VNQKLATALLKKLGITPDIANNGEEALQKLEDNLYDLVLMDCQMPIKDGY
QATKELREWARPIKDVVVIALTANAMQGDEQKCYAAGMNDYITKPVSPMV
LQEKLQKWAAFIQDNSLSSKG
>Tcr_0323 conserved hypothetical protein
MQKLIWQMLLLWCFTSPLLAATSNTDWQNIKYIERAFIEVALKNEYRQTD
MRLIKWGVPIRYQFSYLGLPNNPFIENLAVTHLKQLHTITNHPINQATAG
QSANLQIIFTKDQHYQEAIHRYIQKESKALSRKSNCSASFQLNRQHEIIG
ANVVIPVDYVMSRGLLPACIVEETTQIMGLPNDSDWVFPSIANDKSQLDL
LTGLDYILLKLLYSPSLKPGMNLQQIRPILRSLLHQWKIAKLIQNASQKV
KESGLYPLIY
>Tcr_0777 methyl-accepting chemotaxis sensory transducer
MKFFLNLGIKIKLILLVTVSILGMSFITINDSLKERNTMLNAKKDRIESI
INGVFMQIDHIQQAVKAGHLTKDEAQSQAKQIVATFRYDNGNYLWINDFQ
PKMVMHPLNPKLDGKDLSDYQDKKGNLLFVDMAQTAKKSGQGYVEYFWMK
PDNPNPVPKMSFVKAIPEWKWVIGTGIYIDDVNEEFISSLIENLLILLLI
VLISVAFAYLVFVSINRPLQKMTEIMNKVSNEGDLSEKIEIDQTDELGKI
AHDFNHHITFLASTISEIQRVMSQVEQGKTEVKIETEMQGIFNHLKQSIN
QSIGNINQTIVILGDSIEALSKGQFNKQTNSNLQGHFGDVIHHTETVIHT
LKVSFDEINKIMEEMSVGKFDRRINIDVSGEFKKLEDNINKSLDSVEHAI
LHIADALNRQASGDYHTKTQANLAGDLEILENNLNATCDQIGSTILQVND
SATNVFNMSQQLSEDAQHFSEKTQSQAATLEETSASTEEITSTVKQNTDY
ARDANNLATIAQEKAEKGSEITQNAVVAMQHITEASHQISEITSLIDSIA
FQTNLLALNAAVEAARAGDHGRGFAVVAGEVRNLAQKSSDAARDIRNLIN
DSVEKIEEGAAYVNQSKSSLSEINEGIQEVSKIIYEILSSSEEQAKSIEH
INQAIMSLDKDTQQNAHLIEQTAQNAQNMQHAAQHMLQQMDFFKSDNEKA
GKMLLNNKNNPV
>Tcr_1143 diguanylate cyclase (GGDEF domain)
MPTSSKQHRFIKWRSLSSKRLAFLVAISVFLFLSGMSFWIGFSNYTTQKQ
HLINYDSTYEINSFKASRKALNIHAKTIFQTSIYKDDIFKLMAKAYHGDA
NVKDDVRKELYNKLHPIYQLLQLEHIRQLHFHLPGGISFLRFHRPEKYGD
NISSVRYSIVQVNKTKSPISGFEEGRIFNGFRHVFPITYKDELVGTVEIS
FSVDAIYELMTHSNKEFYSLLLKKDLVKKKVFSSERQNYAPSTISDNFLV
DKEVHGMKSHINAIPFTKIQKINQALHQEFIQQLDRHCSSCNFIVNIDRT
FYLVNFFQLENTKGNPVGYIVNYQEEPGIKLITENFLQHLLINEFLLLII
SLLVFFFIRNQIRQRRLLHKMAKTDNLTGLPNRSIFKRALNENIKRSNKK
QWPLSLIFFDIDHFKKINDTYGHLVGDKVLKKVARNIEDGLTHKDIFARW
GGEEFVILLPNTDLQDAEKVAERLRQKLEAMTDFDITITSSFGVSDLRPD
DTAESFMQRGDEMLYRSKEQGRNRVTANSPLN
>Tcr_1765 hypothetical protein
MYATSAIAWQPELTTPLPIDHWLAPNQDTYFFCDLHADADAFLRSLKLSY
LVTLDSTIDSIQLTTKGMHGQIIIGGDCFDKGPSNLALFKLIRLLKQAHC
DLILLAGNHDIRIYAGLLAIDFMDNPRQAHFFVRMGRKTASLFAEIYHEY
GQEMTPCSLSDAEIKAALLPPKSWFSAFPESVKNVLSFKKIQKEIRQIEK
KQNDFIQACFEQGLTLQQIYQAAQMAKRLFIDKDGEFAWFFQNLDLVHVS
GSYCFSHAGLDDRFAEKMRHDSIDTLNQQFRRQMQSGQIFEMYYSEFGNV
FRTKYRDNDWPLTEKGACILKQNNIFAMVNGHRSHQQGQQLFVRQGLLNF
ECDTLINTNCRRKSNIQTLGEAVTIFYSDGMVSALSSDFPATKQFHPKQL
KQH
>Tcr_0470 two component transcriptional regulator, Fis family
MGSVLLVDDDQSLRAMLSFSLKGSGFTVHEANSTVDAIALLKEYEVDVVI
LDMGMPPNEHVATEGLKLLEWISDEMLNSKVVVLTGQSAEETSYVSIKYG
AFDFLTKPVEYEVLKQSIDRALLFLKQSLKLKEQEGVQKIELDIEMANGV
KAARNAAELKLLKQVLSDTEFNVHEVARRLGLKRENVYYLINKYGIERS
>Tcr_1436 methyl-accepting chemotaxis sensory transducer
MRLHQRLVMMGTSLLSTAAFSQSEVMGAPIAGVALIAILVGAVVAGALVY
LVWCNKPGVCDQTNLIEAVDKIASSDSSFLPLSDEGVDPKLQASVNQLLS
KANEIISSKQGEIEAAHSQVAVLESQIEELNETLSNAYAQAEVTSSQSDV
DASELVSLSEHVSTVVDQMSTGTNAGMASASSVISEVSGLTDEVTHASTV
IKELEEDSNNIGTVLVLIRDIAEQTNLLALNAAIEAARAGEHGRGFAVVA
DEVRILAGKTQQATTEIQKIIEELQQRARNAVEVMGSGQERVEATQMQAG
KVNDFLHEIEDNLSQLKIAQEALSKAVNSF
>Tcr_0134 cyclic-AMP phosphodiesterase
MQLRILGCSGGISPGQGTTAFLLDQTVLLDAGTGVESLTYEEMQQVEAIV
LTHSHLDHISHLPFLLNNLIGGSHQTIQVYGLSHTIDALKKHIFNDIIWP
DFTTLPSHDCPCVQLNIVKYGDVLSLAGKQVVVLPAHHSVPTAGYWIGND
DAAFAFSGDCSENDDLWHALNNLPPVDMLIMDNQYSKKDKAVSELAKHYY
PGVLKSDLEKLDYRPPVFISHLPVRNKEMVLNEIRKELANWKLEVLEVNH
VYNVTKTEK
>Tcr_0027 methyl-accepting chemotaxis sensory transducer
MVDNKINLRFIVKVDKQNRINFINNEYADWLDYKPDELLKKSTSVFLVDE
TPEVVQKNIDEEVYRGRAVSLAVKEKKKNGETFWVDIRIQPVMEADEYQG
YTSIKQLILQEDRIAELEKTYQDIKKGKKTLIKGDVVNCHRHRFNKWFRL
NKLNIVHKVLAAVVLTAAFLLSLAYIYENEQKDFIFNEVISDQSGNIQDM
VDTYFNNKLDIGEAALAGILKMPGFAEAFAQKDMASLNVMLGGLDPYFAK
NSNNKGVKLQLVDRNGMSFYRSWAKQHKQFDVSWRQDVAYQNKSPGLHRT
YSIGKMALTLKNHIPIYDANDQYLGSAILIQGLGSVHKALLSKNIVFITA
VKKSYLTKRNQEVAKFPSVFNDNKLVLSSKKHYETDRGRQLVKDLQAMSS
QTLLEKGYVLDDRYLHIALPLKDEKQNVMGYIIASQTINKFIKTLNHRYQ
AAEDTTTAILITFIIVTILLMIILQYVVIRPLRKAERTMQTAVKNSDLFA
RLSNYGEDEIAKLGYAYNQQAMLSQVAISEINTAMEEIVAGRLNHQVTFP
FESDYGLLKDRMNETSQSLKNTFAAIADVMNDLKMGHFDAQSNASLQGAY
AEVVEDCLSAMHDLNVIFSDISRVMELAAKGKFDEFIHVAAEGDVKRLIE
TLNSTLKQLDAGFSDVISAAQRLAKGDLTQPIETDYEYKIGEAKEAINKS
MSGLGVALSKILEITNQLSLDVSTVNEGTQSLNSRTQEQAASLEETSSAM
EQTAAQTRSNLDHTQEVNRITEKQSGLLTDANKVMVDTQHSMGSIEQASN
QIKEITTLIDSIAFQTNLLALNAAVEAARAGDHGRGFAVVAGEVRNLAGK
SADAAKQIGKLVENTSEAIAVGANQVEEVAQSLNNITNETLKVRELVENV
TRASKEQSHGIDEVNKAITTIDGVTQQNAALVEETTATTESMNRSAEELM
DAVNAFKIK
>Tcr_1108 diguanylate cyclase (GGDEF domain)
MNILIVDPSKSYREVVKEILSNEEVNVIEAKSGHEAFTYLKHKTPSAISI
AHELGDMDSFKFLKTVNLNTILCNVPKFLLTSNASKDFKRKAYDAGFTEI
FVKSDFPTLKRALKSLMLYATMNISAKVLYVEDTQSTADYTSHIMYSAGW
EVDHVKSGEAAAELLDKRKGHYDLVVTDLVLEGNVSGIGLINLIRQGHEN
IRDIPILAVSGWNDLLRQVYVLKHGAGDFIAKPFHETDFLARAINLILNK
KHLDTVKSAKKALYLKANIDAATGLNNRHYMEEYGEKMVADSCGRNEGIT
LALVDIDHFKSVNDSLGHASGDAVLKQVASLVKSHCHSNDLVIRYGGDEL
LILMTDVDQALATERLEMIRIDVARLNPVNVPVTVTIGAASCDKKTKPEL
MQLLKSQNGDADNVSVDLKTLFKTADDSLYMAKQSGRDQVCVNSLMSVNH
PEAE
>Tcr_0227 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain)
MDVNALIIDDERSIAELICSVAELVNVPCHIVTDATTIKESDLQNINLIF
LDLWMPDKDGIEVLGWLQQQEYSGCLVLMSGVDSSVLMSAEGLASAYGIK
VIGHLNKPFDVKEVQTLIKKAQEISHKDFLEQSSLAMEEKLMTPPAIQKA
LDEDRVTVFYQPQVDLNTQRVVGFEALVRILSPENDVIYPNRFLSVAEEH
GLIHDITSRVVDQALGEFTELLNKYGQLTLSINLSTQDLEDLKFADWLYE
KVDELGIPRGKIIFEISGIEKLPSYSLVVAGLSRLRLKGFKVSLDYFGAG
NVTLEQVQTYPITELKIDPSFAVNIMTDEKSAILIKSTLQMCHALDLDVV
VIGVESEAIAAQLKLLGARIVQGYWYSRSLSFEKTLEFLEQNEEAMPVET
VNLCALTEQESTETEVKLHQHEDSPPHKDENERVLSMVEALETKLNQSET
ASVEEKHPNRDSQSSQPLDTDSAKDVENTTVAKHDKEVNEEIHQEEESAL
AQSKIKLGKATPRAMLTFILPLTGKFSFIGNSQKFGMILAYLAAFEERRT
DCYIGLEFYDDASALDQFYTYVEKHISSKSIGIIGPSFSLFESEGFAKKT
AGSKLPIIGSFNSCDDLRKPNAKGLYNFKPGVSEEINLILDRLKDNGNKS
LCIIPKTRVNMGLDLIRARMDASEIISYDMKEFNKVIQAVKKRLPNKVFF
FGSARAMVKLIEEVNDENIQYYTTSLAGTGMLKKLLSRQGKLNVMATSPL
PDLHGDTMVAKLFRSQAKERRIPSKFINIISFEAYLVTKLVLDLYIKHNQ
DMNAKQLKKALENLFSYDLGLDYPVSWAQETRQLLHHIYLNKL
>Tcr_1518 protein tyrosine/serine phosphatase
MENLQTKWDRLKAHLEAWFIDHEILRLFYRNFHALSNNAYRSNHPSAAFI
QKLHEKKGIKTIISLRRADQTGQYQLEKEACDRLGIKLINHPMSSRSFPD
VDKILQAKKILEDAEYPILIHCKSGADRAGMMSVFYKHFILNQPIKEALS
ELNMKYGHFRWADTGKLDIFFESFLTFEKAHPNVSFVEWVQNHYDKPTLN
KEFHAAGWANIVVNRILKRE
>Tcr_0541 two component transcriptional regulator, winged helix family
MAEQCILVVEDEAAIRDMLSFTLTAANYKVIEAPNAEQGWKLLLEHQPDC
VLLDWMLPGVSGISLAQRIRQNDQTATTPIIMLTARGEENDQVQGFESGA
DDYVVKPFSPRALVARVKALLRRQSPEKSTLDLIKIGPLKLDLSSYRFTV
NDEEVKLGPTEFKLMQFFMTHSNRVYTRVQLLDQVWGENVVVEERTVDVH
IRRLRKLLDPVGAADYIQTVRGAGYRFSVD
>Tcr_0152 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MRLNNVTQLFKAPTFPWPIYLGYMFGAWLLVMGLANIQFFLIYDYFSPKF
LIVPSIVGVLVGFLIAKYRILRDRIEAKQMEFSSIVDMAEEVSYFQNIDR
SYRFISPSVLKLTGYDVSTFYSMPNLFSDLVYEDDFPKWLAYERSIAEGN
SPEPIDVRLTTKHKGLIWIRHVSRPIYEKDKLIAVSSTNTDITDQVSQTE
AMEELALKDALTGLPNRRNLSYEAQRMLDATYPFVLIMMDLDRFKTINES
LGHSVGDLMLQKIKDRFELVLPQGAMLSRFGGDEFVFIIPGIRVEQDVEQ
MIRDFLKVVERPMHLNGLNLHISASFGWVFAPEDGKDVESLLRFADVAMH
MAKQRQGVSYLRYSGQVDHYHQRLLVIENRIRTAVEEKQIVPFYQPMFST
VTGDLVGVECLARWHDDELGWVSPDEFIPIAEDINLIGKLGETILEQAII
TAGKLAKFCPLKDVYFSVNASPYQLSEIGFVNKVKSLLEQYDLPPKLLKI
EVTESLFIGGNEYAINVLGELRALGVSIALDDFGTGYSAFAVLREGCIDI
LKVDKSFVQNMADNDQEKALVAEIIQMAHIMNLTVVAEGVETKAQKALLA
EIGCDVLQGYLLARPMSEVEFCPYMNCTGAAH
>Tcr_0757 MCP methyltransferase, CheR-type
MSEREFDFTEQDFTRVKTLVYDFAGIDLNDSKKNLVYNRLAKRIRFLELN
SFKQYLSFVEEQGESEFVHLINAITTNLTFFFREDHHFEYLAHTVIPSIL
ERNKSSKKIRIWSAGCSTGEEPYSLAIVLKETVPAGWDARVLATDLDTNV
VETGRTGVYKMDRLKGVSDARKKRWFLKGSGSMEGNVRVKPELQQIIDFG
QINLMNEWPIKEAIDVIFCRNVVIYFDKETQARLFDRYANLLPDNGHLFI
GHSESLYKVCDRFELLGQTIYKKIK
>Tcr_0200 diguanylate cyclase (GGDEF domain)
MLIDIKDVPEKAQRIFVQLIDIFEEQDINPTPLNYYIWYQYYKGDHPKFR
QEMDNALQDPFGYNDRLGRRLYDEYFSDEKSNNDFDRAFKRLINLVIKKM
NVWSDKLEKHTQDLNQYTTSLASEDIDAAKLKELTHSVLNTASSMKQSSE
EFQKEMLSSNEEILRLRKELIEARAETLTDELTEVGNRKAFNNAIQDLAD
STQDNPQSLVLILTDIDHFKRFNDTFGHLVGDSVLRYFANLMKKTRDDTE
TVCRYGGEEFAILLSHSSLEKAKERAESIRHSLETAKLKRKDSEKTLGKI
TASFGVAVYKGEDHETIDDWIKRADDALYEAKNQGRNRIITDEELEATST
SN
>Tcr_1243 transcriptional regulators, TraR/DksA family
MESSSDFIEDYPQYEMKPGEEYMSPEMLEHFKNKLLAWKKQLIWEATNTV
QHLRTDSSTPADPSDRASQEEEFALELRTRDRERKLISKIDKSLRDIEDG
DYGYCKMSGEEIGLARMEARPTATLTVEMKTKQEMREKQGIA
>Tcr_0166 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MPLSETSSKQIDPTLILVVEDDDTTRLTLNKVLTKSGFKVIDAKDGQDGF
SKFINESPCLILMDVMMPIMDGYAATEAIRNYEKTRAVPILMLTPQDDMG
SIDHAFTSGATDFITKPINWSLLSQRVKYAINSSLIEDQLRTSQSQLMYA
QKLAKLGYWEWDTKADQVTGTGSAFELFGIPNQADVTLEQFFSNIIPKDL
PLIQQAIADASQGYNDIQVSFRVLHHDNSLSHVDCLGEVSFDEHGDISRI
TGSAQDISRLHKAETLIDYQSSHDKLTDLANRSFFNKNLANFIKEANPKK
YSATVILDIDRFKKINDNLGQENGDALLRTVAQRLKKVTREDDFVARLGS
DEFAILIKNTEDAQELNLSLSRIFHDISKAFNVKDQELFITFSIGISIIN
QDGDQASELIAHANIARSQAKLKGGNQFLFYQAEMNAESKEQLMLENDLR
KALDRNEIEVYYQPQIDGHSLKPYGAEALVRWKHPTEGIISPGIFIPMAE
SNGMIVDIGRFVLENAIKEAEKWHAEGFDEMRIAVNLSGRQFSSSNLIKE
VQEVLQNTTLPAKYLDLEITESLAMSNADHNISILKGLKAMGVSLSIDDF
GTGYSSLAYLHSFPIDAIKIDRSFIDNLESQEGQAIVRTILAMADSLSLK
VVAEGIEEEFHVTFLQNKNCDIFQGFMFGKPMPAGDFQQYLKSQKAS
>Tcr_1588 carbon storage regulator, CsrA
MLVLTRRVGETLMIGDDIKLTVVGIKSGQVRLGIDAPKDVQIQREELLLK
NDKAENQAAESLEIEIVAAD
>Tcr_1383 Hpt sensor hybrid histidine kinase
MVLDKEFLGQLLLEKSLWWCFSLSETQKGFQASQALSDKIGSEITDYETF
LSYLVPESRDQVIYKLDNAGRQLKKGERILIGFKVEDKVTWLINELSLTE
KKGVPVAYSTCLEVSEMHELEEKLIESHSQLIIDQLQAKEEMAKKETELL
QQQYSEQTQFLAMLSHELRSPLMGMNSLISIIKDRYLKQESISDQLKVMR
LTIDQLNFLINDILTYSQTEFNRIQLNPTMFRLDEMADYVSHLTKSIASE
KGIFVSFSLNSQNNCFYGDLVRISQVLVNLIVNAIKFTEFGGVFVEIKGS
DKQLELNISDSGEGIDKAELGSIFKPFKQLESKGSMQYIGSGLGLAIVKT
LVDLMGGTISVESTKGVGTSFIVKLPTKPGTCAQAEQLNPVAEPVPELVL
SHSCDFHVLIADDSVINRKVLETFLHQLNCTVDQAKDGSQAWEKFQQASY
DFVFLDIQMPGLNGIQVCQKIRALPDNQKKKLKGVFALTAAHTEAEVELE
GIKVDKSIFDEWLEKPASQDKIIHLLQCKEHAVNEPDEQEEALKQELTDH
FSQTIPEELKHLIPQFIENTSEEIKQLRSEIEAENDQAVREILHRLKGNM
MLFNLDNMVQIVKKLEQFDNYLDKANSYCLVGQIEKILNGLY
>Tcr_1064 hypothetical protein
MLKHALGVFCRSSDSLFLREVPMRVVSLVNGSLLSEAASVYAINYAKAIE
CPLTFLFVDNGLESIDKFQSSLATLEEISEASGVPFEVVILKGDVIDQLQ
HFAQLYSIDTVFCATRKQSNTHSFSEKIVRSGIETAIAVVKVKNVSQVRS
FHRVLLAAGETINSHCYLLWIGLISSNQALGKLYLQNSRNVKKASSKSGL
KYEAAPFVQLAGMLKQQVEVVQVLQPVNPASMNNYLVENDLDLVIYNAAS
YPKKILNQITDQSSINSILFYPWKA
>Tcr_0188 two component, sigma54 specific, transcriptional regulator, Fis family
MKPGKLLIVDDEKDIRSLMQEIFSEEGYEVMVAANGQQAQAIWRDKAPDL
IFLDIWMPDIDGISLLKEMIAENVLDHSSVIMMSGHGTIETAIEATKLGA
YDFLEKPLSLAKLLITAERAMEHLHLHSENRHLKQKLPDQILPIGKSKLI
VELRDSINRLAKYSMPILVKGEPGTGKHRLAEAIHKLGDRKEQPLFEIHA
PDFDEQEELILGLEAEQNTFPGELIHASGGTLIISDVEQLSTKGQNFLSQ
LLFDGSFVRPGSNKKIALDVRIIALTKVGLDELAQSGHFRKDLFQRLNVM
PLEIPSLRQHTEDIPDLIDYFLDYFLMHEGLEYREFNVAAKNVLRQYSWP
GNYRELQNLVQRLLILGEGEVNDDEIRRALESTKNADTVSFSSINTTVNL
KQAKEQFEAAYLSQLLRETGGNVTETARLSGVERTNLYRKLKALKIDPKN
PK
>Tcr_0471 ATP-binding region, ATPase-like
MISEWAGELAFSAILIGLTLILVVWYLHAQSRRLKKAILELYEANRAVNQ
DALDFVDQAWPILNAAGFKGMKGQITWFGEVKQIEKGKEAALSYPVNLAE
GGMDFQLLVAAPRLRGEKKLFAQLIFQTFKSLLVLDVSNKNTQFFLSQKR
LQKYQLFVQHDIKNLAQFIQLLADQVREAESEDDKKLLVDHLKKVLPIVT
ERAEKTIKQMTLSSGSFQSVEPIEFANEIARIAQGLGIKYQLHGVYCCSM
SYTLFEQVIQNVLENFQHHAYGKPLLIDVMPDGHVIFSIAHQAGQDDIQS
ERLFEPFWSSSEEGMGLGLFITRELLSTVGGAIYFEALEHQNRFVVQFCA
QLSPE
>Tcr_0361 methyl-accepting chemotaxis sensory transducer
MKKPTLWSRTKISTLSNLLLIMMAGAGIFFTSAFSLLHHEIFLVQQDWQT
LHPLLLNSSAQSTSSEVVRLSHHLTEGLAWMSQLTLIFIIAVLIAVGAFF
ILMYNTLMNKIVRPLRTLEKGILEITSSNDFSKTISIKYQDEVGQVSQSF
NQLSHNLKSIFDQINDRLAEVADGKFNIRCDVEVYGDLEVLKNNVNASIG
SIELTMNSLESISQAIAQGDFSIRMDQNVKGSLRKNVDFAMQQMDQIIDQ
INQVMRKVNHADYSQRVNIETQGRLTELKTFINQTVDTVSISIQALNQAV
DSLHQGNLTHQIETSFKGELNLLKENLNGTTSYLNDTIIQVMDGSTDVNA
GIEQIAQGNQDLSHRTQGQAASLEEIAAAVEQMTSAITQTADNGQKAQTF
SADTLALTDKAHHVMGESIDSMAKIKAASERISTFIELIDSIAFQTNLLA
LNAAVEAARAGEQGRGFAVVAGEVRSLASKSSGASTEIRTLIEQVVTQVQ
QGSSKLDETNSEFERVTQGIQSVNDLITEISHSAQEQAKGLSQINQAISE
LDQGVQQNAALVEQTSDSAQNLTELSQSLMRSVSQFKTSAHAALPKKLIG
Q
>Tcr_1476 response regulator receiver (CheY-like) modulated CheW protein
MSSFLKGVDQRTSLAGMNRMELLLFKIHGNQLFGINVFKVREVIRTPSIS
PVPKSDDRVVGVADIRGQTMPMIDLAKSLDLPAVPKDKYGDSLTIVTEFN
SSVQGFLVEDVDRIVHLRWEDILPPPDSLQNVNYLTGITRAQEQIVEIVD
VEKVLAEVSGIQEEMSDEFLHQNQAKTKGHDFFVLGADDSAVARNQLKTT
LEKLGISNKIVTNGRMALDFLKKWADDADKDISRPVGERVLMVISDIEMP
EMDGYTLTTNIRKDPRLSDLYVVLSSSLSGGFNDTLTEKVGANKFMSKWH
PEELAQAIIDRIDAVATQRQKQAS
>Tcr_0728 CheW protein
MSEQNKEFLTFKLRKEEFAIAIDRVQEIRGWQEPNPLPNVPSFVKGVIDI
RGTIVPILDLRERFKMAAEFSATTVVIVVNIATSQGERIVGLVVDAVSDV
HQFDMNALQSPPDISNSIDSQYIQGLTTIKDPEAADKDKEDTKEIGMSKS
SKGRMVIVIDIDKLASEGLIEQVANADESIPLQNG
>Tcr_1202 periplasmic sensor signal transduction histidine kinase
MQKPAFRLRLSIRTRFFILLLLLTVLPFLAYKFAVDLHRLLLKNQAIIQQ
QTVINLSYILENRTDLWALQIQAGNPTSQLSHLNLEKSVLWIVNEYGQAT
YVVGHLPNYNSLEKNNDPFSLLGHFLIKTFSAIIPYTLPYPYPQSKTPEI
ALIRQAINGRTFQQYRMDRNNQPVSLMSATPLRVKNQIIGAAVLEQTMDS
LLSESLNYFYRLIGIGGLVFLMVILGAILYTASLSNRIVRLDKDVRNTFD
NYGKVNQLSFPDTRIRGYHDELSDLRHHIYEMLTQLSSYERYLKQLPRTL
RHEIHNPLNRLSMSLSLLEKDVEHKQVRYSKHALEQLKQIIASLSEASSI
EDSLQSQSPEPFDIGEMLKHYLESIQETNDKKEILVDYHLKPDTFILGDG
FMLEQLMDKLISNAKDFNDHQMPIKILTNQTDKTIVIQVQNSGPKLPSGY
EKQIFDGMMSIREVNADDQTHLGLGLYIVKLIADFHKGNVEAHNLINNQE
GEPYGVEFKLELPIYRLTH
>Tcr_1497 Glutamate-ammonia-ligase adenylyltransferase
MSQTIPLEKINSWSLFVERETQRSPELLDAHCWESVYEEGEMIQKIVTEL
KASDSLATLNARLRYFRRAEMVRIAIRDLKGLAEVPETLRDLSDLADALV
SGTLDWHYDDMIKRSGTPIGRESGKPQKMLVLGMGKLGGKELNFSSDIDL
IFVYPEKGQTEGGVRTVSNDQFFTRLGQALNKSLTEFTSDGMVYRVDMRL
RPFGQTGPLAVSFSEMETYYQIHGRAWERYALVKARVIAGDEEKGEELFE
ILRPFVYRKYVDFTAIEALRELKMMINAEVKKKDKHHNIKLGPGGIREIE
FIVQAFQLVHGGRDTQLQGRQLMPMLTALSERQYIDETTKQHLLEAYLFL
RKAENRLQEWNDQQTHDLPTNAHQQQCLAESMGFESYELFEKELAVYLAF
VQTEFDAVFAEESEDAVEDSDFKQACLSNEIDLEVLESLDLSNPEQVVDI
LNQFLTSRSYTHASSDAVGRFKAVLPVLLMGLQDVENEALALERVLKILS
GVMNRSVYLVLLKENLHAIKHLLQLCSLSSWMTEMLVKYPALLDQLLDER
ILYEPLESTDLKQEAHHILDESFPDDETFMNHLRQWKHAQVFKVAAADIT
GHLPIMKVSDYLTWIAEAVLEVTADYAWRFMQRRSGLPGGFDPNKGMPFL
IIGYGKLGGIELGYGSDLDIVFLYDELDPSSASDGDKPLENNLYFMRMAQ
KIISLLTTFMPTGTLYEVDTRLRPNGASGMIITDLKSFEAYQENKAWVWE
HQALVRTRAVVGSEISQQHFYDFKKAFIAKPRALDALKQEVVSMRQKMRE
SLDKTNAEQFDLKQGRGGIVDIEFMVQYLVLGHAHEFDDLTQWSDNIRLL
ETIKSVQLLPVGEVEALIEAYRVYRARYHRLALQNEKSLIPDEDFKVERA
VVEKSWQTLMG
>Tcr_1984 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
MRNNSPVTQKEYDIPSNYILVSETDLQGNITFANQEFIEVSGFSWEELKG
QPHNLIRHPDVPEKVFEDLWRTLKKGQPWHQLVKNRCKNGDHYWVEANIA
PIFQNGEIVGYKSIRNPISQKEVALAESAYTLIKKGERLIKEGVVVTPFS
QKIARLSPLPQKSILGKTIIPLIMMAIIWSAVLQVYLQNVADNLYTGAVK
DRQQLLLKNLDSEISSQSQIALTNAVGIAGNSAVIYGLYDHQDTVLWQIV
KVNYEQYVKRANMSGIGIAIFDANLKKVANSGVNIDVGSLPKKAQTAIHF
QKEGGYIQAQVPVPYGDKTIGLVVISLPLTQVADLEKESKHGYAALAFEE
DRFHLAEGFQNSPIQQLLKDAEMERLATQGYTVVDNELLVLGLVKQDDQV
VGAHVVSEPMVILDKLLSDTYFMIYVSQIAMSGGFILLLIQVYWRMRSFV
LKPLKSLTQKLSRASEEGSLSVRADVVNQDEIGRMATNFNLYVTSVQQLM
VGVSDMVSALSKGNLHHRYKADAKGDLNILKEDVNMSADKIKDVISELER
AIHCIKEATYDFESQTQFEGDFSVMVSDLQDAMKVTHEAVTGINATMEDI
AAGEFSSRLNANLMGELDALKTNINHSLDQLEDGITEAVDVIVAQSKGDL
TQRIEGDYQGKLNVMKEALNASLDNVSGAVSGLMLSSQTVNDASSQIASG
SQDLSDRIQQQASTLQETVNSMESITQTVRKNAESAKEASDLASSAKVQA
DSGAAVMSQTMNSMQELSESSQKISDIIGLIDSIAFQTNLLALNAAVEAA
RAGEQGRGFAVVAGEVRTLAGKSAEAAKEIRSLIETSVSQVAHSEGLVAK
SEQEFSSILEMILQMDRFISDIAKANNEQTKSIEEINEAVEDMDGVTQQN
AALVEETAHAADMLKGEAEEMRSQVTYFRVKPGQNNRLAAPKNPQMAALP
EVIK
>Tcr_1292 cyclic nucleotide-binding domain (cNMP-BD) protein
MAKAAESQLIAESVLGSDLTQEDCETLSEIVKQKNLTKEEVLFEPDTLDG
NLYILVEGKLDILKVINPNKTIHINTLKKGALIGELSFIDGIAHTMRLQA
RNEATVLILHRDEFETLGEQNPKLMFNVMKSILRFSHHLQRKMLQENLEM
LRLVQSEYMTQY
>Tcr_0197 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MKTGNSSSFRYFSAFFLIVFGFLFMASQYPIAPITEVDINWNLYFQIAIA
LFFLFAFIGYKRFQKLNQDTLRQAEEAKQKLRTLKRQHELEKKRLSFVLD
CGRLAYWEWDIKNNQAYFSNLWQDMIGFTEHDFPQDLHAWQARIHPLDQE
QVQKKLLKLLSHQITDYEDTHRVMDVNGDYIWVYDRGQTVTNELGNVEKL
SCVRLNITQQKQLEEELTLDKILLENTQEAIAITNENLSFIRTNPAFHDA
FGLTQSDLAKMTLKDLLDNLQDEPPQDILSQVDKDLAWRGELTLHHTNGE
LARSSLVDCQKVIHQTTQTTHYALVYTDITELKQTQQELSFLANTDIVTG
LPNRNYFYQALEEWLEAFKDSGNKFTLMFLDLDNFKTVNDTLGHDTGDHL
LKSVSELIAEHIAEDTLFARVGGDEFVILCRAYTTPEQLNEIGQNLNQLL
SQPFNIGDHEIKIGSSIGIALFPDHGSDKETLLKHADQAMYQAKNAGKGR
YRIYQAW
>Tcr_0077 methyl-accepting chemotaxis sensory transducer
MFKRLGLQPKIIFLSLFITLLVIIALGIVGWVTYQTQFKQIAHNTAEEMV
QDVDRSLDKKLDIGVTNAVSFASNRELIQAIVNNDKPLVNEILGNISETY
KKHTQYKNVKIHIHTPENRSFLRSWRDKNGDDLSAFRFGVQKVINEKKPI
RVLELGRAGLAVRGIAPLFHNGEYIGSLEFIQGLRSMVKDYQERDMDYLM
LLNQEALKISVKASKNTPIGNYVLANNKWFSSESIELAQKIDWRLLNKQG
WLIQDGRLITQIPVKDMRGKLVGTQIIAEPTTSFDAEMAGILNETIKQIL
SILAIVILMVIAILVSLNKLVIRPVKELQNTISTVLTQGDFSVRVRTDNN
GNEVNLMAKDFNELLQMLQNVIASITESMQSIEKGNLSTRVTAEAVGELD
GLKNSVNQTAQILDDTMSEIERVLGEMQLANFSVDVKDVPAEGAFKKSLD
SIHETVASLKSAIAEINQTMMAMSQANFTQPIQTPLSGDLDHLKTNINNT
LVDLENGFNGFTHSLTQLTSGDLTTRVEGEFSGQLAKLQDIINSSLNNIG
SMFTEIKFMSDGSSQNVTQVSRGNMDLNERTQNQAASIEETAASMEEITS
TVQHSLSNAKEANHLSQQAKEEADKGAQIMDQTRSAMRGIEEASGKISEI
TTLIDSIAFQTNLLALNAAVEAARAGDHGRGFAVVAGEVRNLAQKSADAA
KDIARLVQDTAEQIANGTELTEQSSSMLSQINQRITSVSEMVDAITKSAE
EQSLGISQINQAVSSMDQITQQNAALVETVAEDTQSMDKKISRLVELTQI
FKIDIPQLSLGTTVSTGNFDFAQARRAVKACRAHISGLLHTGSKDFDYNM
VVNPENSELGKWLATTGQQYQQHSAYQQLVSLNKAFHQSLEEAVQLLDKM
PLLPSEKVAQIEHASDALIEAINQLENAEANLSENKALPHH
>Tcr_0542 histidine kinase
MSKGISRELTWIVTGLWVALFFGWATELWTITLLAYFLFYVIRQLYSIKR
FEQWMKGSTKVPYPPSSGLWGELSYLVSRKQRSLEKHADLQFYKSEQFLA
ASMTIPDAIISLNEYNQIEWFNKSAKKIFKLKHSDTGRKIETLFRHPDFI
QYLKSKHYGKGMILQSLNGMPRVFNIKLFPYFKEHKLLIVKDIHELYSLA
QIRRDFVANASHELRTPLTVLNGYLEVMIDSMEPDSTWQKPLEQMHQQSY
RMQSIIDDLLTLSSMESETITGKQKQVNVPQILQEMHVDAEQMSHGKHTI
DFKVEMNLALKGYEEPLKSVFMNLISNAIRYTPENKAIEVRWYHDQKGAH
FEVKDNGIGIAQEHLTRLTERFYRVDTARSRDTGGTGLGLAIVKHILERH
HAKLVVTSQLGIGSVFRCDFPSRAMVLLQDSEKKS
>Tcr_0750 CheA signal transduction histidine kinases
MDEEILQDFLVEASELVEQLDEQLVELENSPSDSDLLNAIFRGFHTIKGG
AGFLGVTPLIEVCHRAENVFDKIRNGDVEYDSTAADVIMRAFDVITDYIQ
QLNDGARELEEADEGLLSELDALWKGGATPQPASEPAQEEMTSHPKLELP
EGVDPDGEISDDEFEALLNQRDALSGSDSSESETEEVKLALPDDVDPDGD
ITDDEFEALLNQRDMLEGIQEPQETVSATPPPAPETVKPTPPPAPKKESK
PETPKPEASKAATAESTVRVDTRRLDEIMNLVGELVLVRNRLLTLRSSDG
PEEALSNAVGNLDHVTTDLQASVMKTRMQPVKKVFGRFPRVVRDLARKLG
KEIELELKGEETDLDKNLVEALADPLVHLVRNSVDHGVEMPDVREQAGKP
RKGTVILAAEQEGDHILLSITDDGKGMDPDVLRRKAVEKGMMDEVSANQL
DDKAAFELIMSAGFSTADQISDISGRGVGMDVVKSMITKLNGSIDINSVL
GEGTQIKIRVPLTLAILPTLMVSFEDDSYAIPLTSVQEIFDYDASQINRI
DGQMMVRLREKSIPLLFLSDWLAPDQVKENYEGDKVIIVSIGNQRAGLVV
EQVNGQEEVVIKPLGVMMKHLEGYAGATITGNGNIALILDLPGVIQRFQY
>Tcr_0860 diguanylate phosphodiesterase (EAL domain)
MEKLFIGRQPIFDRSNQVYGYELLFRNGFHPNEAVFDDDHYATATVIHNS
MMGLALSDLVGNAKAFINFPESFFEPEVDPCFSSNRIVCEVLETVPVTEA
TLAGIKRLKQKGFPIALDDFVFKKEFIPFIRLTDIIKLDIENVNPSKIPL
LVQKIRGVASARTKILVERVETKDVHQTCLEAGCDYFQGYYFAKPEIVTG
QQLSVSKLHLFELLRNLSEPSISLDKLEEIVSKDVGLMHKLVKLAVQHRT
AKMPEFDTLRQVLVLFGLKRVQSWASMISLSLMDDVVPEVFNIARTRAVF
MRLCAQHEKLSNPESYYLTGMFSLLDVILKKPMEELLKSLALNEAIIQGI
LNEKGDYGRLLKMVKSFERSDSDELEEVYRYLYVQALKESHDTQEVM
>Tcr_2068 multi-sensor hybrid histidine kinase
MIKKTLLKFYEWPLVIAFSATLLAVYGLYQVFEQGNQQERQSWGQLSVER
NKLETLTKIYDLRTQLKLLLKDAVVHDDKSEQREIFNKISQIRHKIVEES
ARIRRLASQKEELRILVEHNQILEKGLPKQFYYQSLLLDFGAIQEAKDVL
YTEVIPTQDYADGLLSSFHLLVGHSIERLQQEHLAKKAERDKNFKQQVLL
VIILVLVISILVISLVSYSKRRLQSYTVELEQEVKSRTYQLTEAKNELQN
SLADLESILHAAPDGILKTDKDGKIMEVNPAMEKLFGYSADELIGNNVAM
LMPRAYRKYHTEIIHNLNTNSFNRTNLMGQDGRVKGQHKEGGVFPIEAAI
GPIKDSNQSGFTIIIRDITNNIHIEYKLKKQKELLETLWKATNLFMVYKD
LSEVADYLLGRILKLTKSEYGFIGEVLHDADGQSYLKTHALTNIAWNEET
RKFYDENAPEGLEFRNLNTLFGHAITTQHVVISNDPKQDKRSGGLPEGHP
DLSAFLGVPVFYGSKLVGMYGLANSPDGYDEEMVDFLASFTQNYGALIYV
KRMLSQQEEMHEEILKERNEAEKASQAKSQFLSSMSHELRTPLNAVLGFA
QLLDMDENLTADQKDNIYEIVKAGNHLLDLINDVLDLAKIESGNVDLSIE
PVGLKEVLEECRNLMLPVAENKGISLDIPALNDLYVRADRVRLKQILLNL
LSNAVKYNDDHGRVWVECGQQSENTLRISVKDSGLGVPENKQSELFQPFN
RLGQEGGGIEGTGVGLSITKTLIELMGGEIGYQPNTPKGSCFFVELHIDS
CHPFEEGFDQALLLDSDKEDQLSKTILYIEDNPANLKLVSHVLAKRDHTN
LITAHEPQLGIELAKANKPDLILLDINMPGMSGYEVLEVFKKDSDVSKVP
VVAITANAMSHDIRRGKRAGFDDYLTKPLDVENFLKVVERYLTKTEAK
>Tcr_0379 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MKTHKKTFFTHRPFVELERIISSNNLILFVLIVLIITINSAGFLSVKWLQ
SEWTHQYTVYQTKQKLYFDLYRESGYGGFIHTFKNAVLRKDPAYLKSLSV
HHQNVEKTISTLKSLATTQSEQSKLRDVQNTFNRYWKKYTLLEKAMQENW
SAERLDKLVFVNDKAALKALNDLTALNQENFNHSVARNNQLIQRVGLYET
VSLGVILFFSLILFFTMRKKAGLVNKVLKMQKDAVEYKELYEATLDSMVD
ACIITNEKGIIENFNQIALQRFGYTAEELMGQPIEILIPEGDHKRNHAHY
MESSSMHKKVLFKGRELKAITKHGELLSSEITVTPLKQSEDLKFVGIIHD
ISDRMKLMEQLGSLLNQLRDEATKDYLTGLLNRKAFFEQAEQIWLSAKEH
HQPISLLMIDIDHFKRINDSFGHDAGDRVLIEVANVFSQNCREEDLVCRY
GGEEFIILLENKDEQPTLEFASRLKKVIQEMSVSEQGEVIRFSISVGVAT
GSALELNSIETFISHADQALYQAKANGRNRVEVFHAEEKT
>Tcr_1933 uncharacterized conserved coiled coil protein
MSTSNKQVYQQKLQAQLDEWSADIDKLKAKARQADADAQIDYNQEIETLK
EYQAQANAKLSELKSASDDAWQDLKSGTEEAWKSLQTAIKSAADRF
>Tcr_1021 diguanylate cyclase (GGDEF domain)
MISLEQMPAVLDALPDPAFLFSRSGKYVAVYGGRDNRYYHDGSGLVGLYI
ADLIEVEKANWFLGKIEEALESKKLLIEEYELSNKDVKGLSDEGPQNPIW
FEGRIQALDFLVDGEDVVLWVASNISERHDLEIKLRQLGDTDQLTGIFNR
RRLEHDFPLHFESFTQHSTPTSVLMFDLDNLKQVNDRFGHHAGDNVILAV
TRICQSHLSRNDVACRFGGDEFIVVLPGSDLEEAVQLSEGLADEFKQGLK
PFCVDGIKVSVSMGITTIKPEDKSYQDTLNRVDKALYTAKKNGKNQIVIE
>Tcr_0553 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
MSKNNGPVTQKEYPLKEGMTIVSRTDLHGNIIEANDDFIEASGFEWKDLV
GQPHNILRHPDVPAAVFKDFWDTLKAGKPWSQIVKNRRKNGDHYWVKANA
TPIFEGGEIKGYMSVRIPATRAEITAAEKAYQQISTGKLTLECGYPVTLA
SRLNPFSQFESSHLIIFFSILLLLSANAPLFITNIPILVFEILDLMFILL
ILATSVITNRKLQKTYEHLTCISEGHFNQQINSSGRNLTSRILGRLKSMQ
IRLGADFEDVKASLNSSMRIEQALNSASSNIMVVDRFRNIIFMNKAVKKM
LKKVEPELKKDLPNFDTDSLMRESIDVFHQHPEHQANLLDNLKETYEARI
KVGNATIDLIVDPIFSQDKKRIGTVAEWKNVTEQLAIEENIKKIVFNASE
GLLDDRIETKELEGFNKSLSNSINELLDSFSHLIHNISEILCKMSNGDLT
NRMDGNYQGEVHAMKVATNSALTNIEATFGQIKTGSNEIGSMAGEVSHAS
EDLSERTQSQAASLEQTASSMEQITSTVKQAAEHTHRANQLSSEATNEAE
EAIEEMKETSAAIHGISELSKQIADITSVIDGIAFQTNLLALNAAVEAAR
AGEHGKGFAVVAGEVRNLAQKSADSSKEISNLITTATQQISHGTTLVEKT
NAAFADVVNKIHEVSTLIDQLSTGASEQTKGLEQVNIAVSSLDEMTQQNA
ALVEQLAATAGNMSEQAEMQADFVGKFKISSSAQPNAIRGDQQASFELEE
AKNSHRAWTVRLERFLLGQTVDFDKNSARRDDACPLGKWLYGEGQKYAHL
SEMQQLIKVHAEMHQTVGKVVDAKEMEDLELANQEKDNVSRYSQQILDLI
DRLKESLSKNPQASASELGLENKPAKPANKDPEDWSDF
>Tcr_1999 methyl-accepting chemotaxis sensory transducer
MDNFNMAFMNYNKPSILRKMLLVFLGFGFFMGISFPLFANLFVEWKEGML
AWFVLSCIIAGISIGVFNYWLLNYMLLNRLKRIGEVANAISNNDVSHNCS
LISFDFIGDMANSFNLMSENLRNMISQISDVSSHLNQSANEMVSVTHETQ
NGVSRQQEGTQMVVSAIGKMTDTVTEMSNNTFAASEAAEKANSATHDGSM
VVQDTVSSIQALADEVEKTANAIQLLKEDSENIATVLDVIKDIAEQTNLL
ALNAAIEAARAGENGRGFAVVADEVRTLASKTQESAKKIESMIANLQTAA
QQAVDVMNKGREQACSSVKKANEAGDSLKHIAAAVNTITEMNNQIANSAE
DQRKQTEVVNNSVNQINDIAHTVAQGAAKTDNASKEVDNYAAQLSTLIGQ
FKTRK
>Tcr_1445 PAS/PAC sensor signal transduction histidine kinase
MSAIEKEVEQKRLAELEEAFELFNQTSSQLTVAYESLQNQVEDLQEKLAE
SNREKHQVGERLEQLLNLLPAGVIVLDEQQRITDMNPAAENILGKDAVGR
LWDVVVRNAFLTFNDAGELITHNQMTFQLSESPLNFSFDGQNVTGKILLI
QDVTDARDLQQHISRHQRLSSMGEMAASLAHQIRTPLASALLYVSQMSSG
QLDSQKREKFVHKSLNSLRHLESLVNDMLQYAKGGKAKDQKVAVDALLEN
LKQAVEAKAQQSRSVIEFDEIPPGLVVLGDQDALLTALENLVSNAIDIVS
EQAEISVSVKTTQNLVDIMVADNGPGLTEEMNEKIFEPFFTSRAQGTGLG
LAVVRAVAEAHGGEVWVNSVVGRGAVFGVRLPLLKIEESS
>Tcr_1896 putative phosphohistidine phosphatase, SixA
MLLRHAKSDWKEPELPDIDRPISDKGKKSACKISHWLIQNNVLPDLVWVS
PAKRAQQTLKRLNLPKEIPVETQELLYLANTDQLKDLLSKIPEKFGRVML
IGHNPGFEKLMRQLMATDDPNKPELFPTATLAHFILPNQWHDLSTGEAKL
INFVRPKDITLASCKEIS
>Tcr_1924 multi-sensor hybrid histidine kinase
MTSMIKTTSLLRKPLMLILWLFVVLFILFSAASYSLHQTHLKQAEKHFIT
VTSTLLDEQIKKKFDVGQAINLSYASNSQLKKAIAFEDRTFLIQELKHTQ
QNFSIWTRFKEIGLHIITADGRSLLRTYDIPSYNQDLTRHNLIQKVIKTR
KNVSGIDIGGASTNYRLIDIIPVFANDDPEEVIGFISVSQGFESIMNAMN
KAGFQFSIYKATFPDNGSAVEFAQDDNPIYETQALKNLSFTEKNLLKNTL
HFQNQQVLYTRNLFDNTGKIKAAIVVAEPIQILQREAWQNTKNYIIVFAF
IFIMLLVLSIALLVMMRKEIINPIRLLDQVMGTIIQTKAFDQEVDVFENN
EIGQMKHRFNRLLSEINELIYSINYQQKAIDQTLIVSRTDPYGTILYVND
NFCKISGYSKEELVGQPHSIVRHPDMPKSTFENIWTTIQSKKIWSGEITN
LRKNGETYYVMSYIMPLLDKDGNIKEFLSIREDITERVHLEKSLEKAKQD
AEERRLVAEKSNQAKSEFLSSMSHELRTPLNSIIGFAQLLELSDLSEKQK
KQLKNISTSGEHLLHLINDLLELAKIESGNISLSVERTELKPIVEECLQM
VHTAAEKHHIKITISEKSNCNYFVIADHLRLKQVLVNFLTNAIKYNRENG
SITLFAEKKPAEESPHKNGCIRISIEDTGYGIAEKYQKKLFQPFNRLGHE
TSTIEGTGIGLAITKDLIEKMDGQVGFESTEGVGSKFWFDIPIASDIDSD
SLEQCRLKPETEIENTFIEPKKTGKTTLRILYIEDNPANMQLMANIIETL
DGCELVIAPNAEDGITKAQQFLPNIIFIDINLPGMNGDEALPILKAIPEL
EAQNTLFYALTANAMKEDVKKGLIQGFDKYLTKPINVAEILSIIKEQTYS
L
>Tcr_1494 putative signal transduction protein
MDIKQQMLIAQQQLADFDIPTIPAELIELQNLLQKTEFPDMHEVASIIGR
NTVLSGELIKVANQSQFLSKDSDSVTTIKGAIDSLGLKRLKNLVFGLGFK
TQVADIIFDDLMDHSIDVANVATELSRWVDGVQQDEVYLAGLFHNAGAIV
MEMKFGNYQQTFYNTLTNCYSGLSREVKNYKTHHGFYGLLVAKEWRLDSI
YAQVMLMHHQRNLDAVKNKHVRTLIALIQLGNSIVSEVSFDSFLGSEVKE
MLERAQKELYLEDDVIDEVRRALMSNSLV
>Tcr_0380 diguanylate cyclase (GGDEF domain)
MDASDTLTHVYDIISEGIWDWHCSTGYVYRSPGWYRMLGYEVDCFEKNVN
TWEEVIHPDDYANVMQHFEDYIQGRSEEYRIQYRCKKADKTYLWIEDYAK
IVERSNDGRPLRVIGAHNNIDEVKLAQEALKQQNHLLKNTNASLEEQIHE
RTEQLMLLNQRLEEKIEQAQFHACHDGLTELFNRRSFEEKLSQEIKRSRR
YSQPMSLILLDIDDFKIINDEYGHKVGDQVLCELAVFILQHVREFDVVA
>Tcr_0133 metal dependent phosphohydrolase
MNASLLEKIEQLNQVGIALSAESDTPTLLQQILTSAQALTHADGGTLYRV
IDQQMLHFDVVQNTSLGIQLGGNHPEPIAFPAIPLTRSSGDENLTTVSSY
VAIKGETVNIKDIYADHDFDFSGALAFDQQVHYRTQSMLTIPLKNFDHDV
IGVLQLINATDQEGQVIPFSEESESLARSLASQASVALTNRQLINEHKQL
FEAFSKMVADAIDKKSPYTGEHCQRVPVITMMLAEAASQSNHPDFENFQM
DESDLFELETAAWLHDCGKLTTPEYIMDKSTKLETVFDRIELIKTRLNLK
AFQSLAEQYEIPLEDIKASQKKHYELYQRLQDINIGKEFFNEASATFLKT
VQSETYRTLEGSKQPMLNEDEFLNLNISRGTLNDEERTIMQDHAAMSIHM
LDILPFPKELQRVSEYAGGHHERMDGKGYPNQLTREDLSIPARIMGIADI
FEALSAGDRPYKKAKSLSECLRILGFMKQDGHIDPDLFNLFIREKVYLTY
AKAYLKPSQIDEVDPNQIPGYEAT
>Tcr_1444 two component, sigma54 specific, transcriptional regulator, Fis family
MSIAKILVVEDDKELQEALVDTLELNGFDVVSVGSAEEALVALDDEIAMV
FTDIRMDGMNGYDLMKRIRAIKPYLPIVLMTAYGTVEQAVEAMKSGAVDY
ILKPFEADVLVEKAKAYFYRDASAEEDFVVADATTIQLKSMAKKVAESDA
SVLITGESGTGKEVLARFIHNHSTRSKQPFVAINCAAIPENMLEATLFGY
EKGSFTGAMKAMPGKFELAQGGTIFLDEIGEMKPDLQAKLLRVLQEREVE
RIGSSKLIKLDVRVLSASNVDMKKAMADGNFREDLFYRLNVFPMRIPPLR
ERPKDIAAIAERLLQRHCGGRRVEPMMSAPAMRSLIQFQWPGNIRELDNV
IQRALVMMSGETIQEQDILFDDSFHQDGETTQANGVKEMGRSDVEVLQPA
SIDGQSPSTDLKEREVQIILETLKANNGHRQKTAEALNISPRTLRYKLAR
FKEQGLDVL
>Tcr_0770 diguanylate phosphodiesterase (EAL domain)
MTVISRRLNMQSPEQVGSQSLHIENKKLYSVFQPIYSFSNQACVGVEALV
RGTSLETGFQVTVNECLSVPDSMNRADFSQALNHLHVKNWQQSKLPDSWL
FLNLDFENVSTLDDICIEKVLKDLGVKGHEIVIEVVESEITDETLFEEVI
DTLRRLGCLIALDDFGAGHSNVDRIWKAQPDIVKLDRGVLLEATKSLRSQ
SILKNLTRLIKEAGSVCLLEGVENKEQALLAMDAGVDLVQGFYFARPNRL
LDQVEKGQACVKEVIDEYPVYIKERAFISSIQLKEYESLFESMSDSGRFD
FLEQKMASHASNLSFVKRFFILDQDGFQVSDEYNTPSVNNRVEVLKKGKG
LCWKNRRYFTKALQKSGQVHVSEPYRSLIDMQLCFTISKQIILEEGSFVA
CFDVVYRDKSMESV
>Tcr_0004 two component transcriptional regulator, winged helix family
MSKILLVEDEALLVENLKKNLSQQQYIVDSALDGEEALYLLNEFEYDLII
LDLGLPKKSGLQVLEQIRADQNTTPVLILTARNTWQERVEGLKKGADDYL
GKPFHFEELLARIEVLLKRPTQPQARRLQFQEYELDLDCRELKVKEQRFA
LTKTEFALARLFLSHPNRVFSKDTLMQRLGDQHHERDSNLIEVYIRKLRQ
YMGKTAIETLRGQGYRFVGETSS
>Tcr_2129 quorum-sensing autoinducer 2 (AI-2), LuxS
MPLLDSFTVDHKIMNAPAVRVAKTMKTPGGDTITVFDLRFNKPNVDMMGE
KGIHTLEHLFAGFIRAHLNADDVEIIDVSPMGCRTGFYMSLIGTPDEKRV
ADAWMKAMQDVLNVEKMEDIPELNEYQCGTYTMHSLEEAKSIAQNIIDHG
IGVNKNENIALDKETLKALGNDV
>Tcr_0431 hypothetical protein
MKAQAFIEAVKQLTDDDFQLILEGSAIIIENDVALTTGRADSAYVIYELG
DDPFTSYDEIKSFLIQNAEALLKEYYQFNPVSRQYFDRSLNKLFEEYGPD
AFSATPNGEPERVLFVEDGELISEDASSPRFKYGMFMTIEDHIKPLARAN
KVKNWVQSGTAYGDYISVNVCRFSAME
>Tcr_0500 diguanylate cyclase (GGDEF domain)
MIHISTIKEMVRISPLDKLEVEKHYSYLLEQEPQFEQSVAQCIEVYQLQS
LTPETLLANDYYRNLIHGVYQNSFYNVQYHQTLYWLKSGLTQNQILLLLA
HMRMQFIVYAEGLKSDALASSLCHVLDVGQSIVATIFNVAESIERMKARS
SQEIRRLKNSYRLVAFDLPKDVLKAYIDHQTWKISAFELSLGYETDIQGF
EASHLKCRLAKWLDNGGLELIPKAKRHKFLNDHEQVHRLGTMAIEESEHN
RPENIVELLFEMEIASEDVMEVLLNLIEQEFVAAANADSLTGFPNRRAFD
LEFEKALAFAKRHDFWLDLVVVDVDFFKAVNDEHGHVVGDAVLKRVAEIL
DDVARTEDMLFRWGGEEFVIITLDKDSEGSEMLAERIRKAVEDEVFFAGT
DQEMRLTVSCGALSYWAGLSLSEEEVFELADKQLYLAKESGRNQVCHQVY
DVVPIQKA
>Tcr_0702 protein tyrosine phosphatase
MKNKEKISVLFVCLGNICRSPTAHAVFRDMVKSEGLLDDILIDSAGTASW
HKGKPADSRSIQVAQNRGIEMMDLRSRPVDLGDLIEFDYILAMDEANYSD
LMEMALPEHHDKIKMFLDFAPEYPETEVPDPYYGGPQGFDHVFNLVTAAS
SGLLGEIKQRHL
>Tcr_0785 diguanylate cyclase (GGDEF domain)
MPDQKPLVQPVPPRWGYFIAIALVGAIALLFQLVYSLKQNQALFDTQVQY
LTESVQGAFYDSATNLKDKYNFLLLHYSHLQDITRLVNPADRQALYQKVK
VDFDAMQKKDPSLFVMHFHSPKNITILRVHNPKAYGDDVTKTRPMVVYVN
KNRHQVSAFEAGRTGLSYRINTPFFSEGGQYLGVLEIGVKPEYFIKRLKN
RFDVQARLLVKKSAFKHFEYERDYPKIGRYSVIYSDPIFNEMDIYKSEKS
QLIHKDGKTYLVVSGLHLNSYDGHPLAEFQVVEDVSHFYQKHMRSFWLHW
VLNIAGLLVFLVLMYFILKRYSDRLMKSMNTINVLQQKNEAMKYNSEIDE
LTQAYNRRYFNQKLRQLLHYQDNRHPVSVMFYDIDFFKQINDTHGHLVGD
EILKSLSHFIRGHLRSEDILVRWGGEEFAVVLKEAHLQQAVEKAEELRQA
VEEKTWPNDVKMTISISVIELHENDNLKSLQARLDDLLYNAKESGRNRVE
HE
>Tcr_1390 anti-sigma-factor antagonist (STAS) domain protein
MITHKIKDQTLWIYVSDKFTIDSFADFQAAYTNNEFKDIVIDFSETSHID
SGGLGMLLQLRTHLGEDSNRITLCGLSDHILKVFEVVNFEKLFKMA
>Tcr_1612 CheA signal transduction histidine kinases
MDMMETFRQTYLEESFEGLDVMEAGLLDLSPGTPDNEKINEIFRAAHSIK
GGSGTFGFTEIIDFTHVLETLLDEMRDGRRDVTQEATDTMLQAVDVLRDM
MTRLQNHEEIDEVRASEVQKDMEAILNGGSVDSEPSASEMHSTEENQPTS
STASGSWVIDIVPEKELLQTGNEPIRIFRELETLGEISVSADDSALPDVA
ELNPEDLHLKWQVTLTGEGIDEEDVKEVFEWIDGDGAEVTITAPSTTASD
SSTANAEPAPEPVVAETPAATPPKADVKKPAAAAKPAQAASAPKQDSSIR
VDLSKIDQLVNLVGELVITQSMLSQFGEQAEQNEDSDWADKLKEGLTHLE
RHTRDLQESVMNIRMLPVSFAFNRMPRIVHDVSKKLGKSINLVMEGENTE
LDKTMLEALTDPLVHIVRNSIDHGVESPEVRLEAGKPETGTVKMAAFHQG
GNILIQITDDGAGINADKVRQKAIEKGVIEEDHKMSEEEIIDLIFHPGFS
TADVISDVSGRGVGMDVVRRNIRGLGGSVEVKTEKGHGSVFTIRLPLTLA
ILDGQLAKVGSETYVFPLVSIVESIQVDKSLVKGIAGQTELYKLRDSYIP
VIRLHQKLGIKDARTDLEEGLLVVVEDGGKRAGIFVDDLLGQQQVVIKSL
ESNFMKISSIAGATILGDGTVSLILDVTETLASHKGGNVQSNAA
>Tcr_1127 cyclic nucleotide-binding domain (cNMP-BD) protein
MLNMTAAELFDYFQENAICESLTRPDVEVMSEFLQEKQLKKGDVIFDMGD
VGDSMFFIVKGKVAFTTTDGQDEAEVGIQGPGNLIGEMSFFDRKPRMLKM
TARSKEVTLLEIKRPMYDRLKVEHPYIAVNLVENAVVSLDHLVRALSQDV
SHFEHYMVGFGRH
>Tcr_0090 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
MTDNMRVRNLHQKILNLINNSETIVFYCEYAPRWPVLFLSENFNAFGYTP
EQFYAQEISYQDLIHPNDLAGLEQAVAEQAESGAPYLSKRVRLRKSDQTY
AWIDIRLTFERDDTDHVTHLLGKIMDITKTISSEEQASLFAKVIQQTADF
VKITDKAGYLVFVNQALMDKTGYTEQELIGKTPAVLKSEMQDQEKAKSLW
DTILSGEVYHNRIMNRCKDGSTYYEETTISPIFNRDGDIEYFVSTGKDVS
EQVKMQQELNDLAMKDALTGIWNRRHLTDVVNTEMKRVNRYGGRFGMIMF
DVDYFKQINDDFGHDIGDETLVQIAKIVQKIVRETDYIGRWGGEEFLLIA
LELDASLTAKLAEKIREAIEEFVFPKVGQVTVSLGATVYHKNETEAQLFK
RADEALYLAKRHGRNRVEVY
>Tcr_1554 PhoH-like protein
MTDSPKRLFILDTNVLMHDPMALFNFEEHDIFISMTVLEELDAGKKGMSE
VSRNVRETNRLIDQIISNASFEQIKLGLDLERIHPNKERETLHLGKLFFE
TEPMVAQLPETLPSHKADNHILQTGLALKLQYPSRNVTLVTKDINMRIKS
STVGLHSEDYYNDRVLEDADLLFSGWEVLPEHFFEENFSKMKSWQEDNKT
FYELELDETHHWYPNQCLLSANESGFSAIVRKVEHNIATLEYMHNFEQSK
RSVWGITARNQEQNLALNFLMDPNIDFVSLLGTAGTGKTLLALAAALEQT
LDEGIYNEIIMTRATIPIGDDIGFLPGTEEEKMTPWMGALMDNLEVLTHS
DGHVTDWEKESTQELLNKRIKIKSLNFMRGRTFQNKFIIIDESQNLTPKQ
MKTLITRSGEGTKIVCLGNIGQIDSPYLTETTTGLTYIVDRFKNWPHSAH
ITLRQGERSRLAEFASESL
>Tcr_1394 methyl-accepting chemotaxis sensory transducer
MKFFNFISINLRLFINTLLSILFLMSIAYIGWSALSEVRVKATSLSDLQH
QQSDRIANFQQSLILTTQLSNEYILSQSQSASQKFNSAIDELKKQTEAML
SVLHAEENQKAIQTLETVLRKYKKATNSNVFLKKEVNNTLEFGIEPTTET
LKKATTTLLKTDLATEESTLSEALTSIQKRLNASQLILGKMLSTKNPELI
KAFNENGLGDDANSDIETIVSAFDGNFQYMDTLDELVSARDGYQESFSDI
KDYMATETDNNGSLISLINEANDIIRQLSSQSQQNTSALINELNVLSNEQ
IHQLAIISIISLILMILLNLVVVASITRPLHRIKKNIAFISKTGDLKQWT
PITGKNELVDMSNSIQELILSFRQITTELQDVGIALSNGEFDKKVEQDYA
GDLLTLKDNFNASIHQISDTMTAIQKMSQALNQGNLSFTEPSDQYLGAYR
IVIESLNSAMETQMNAIEAVKDVMQMMNKGNFSKRIELNMPGDLSQLKTY
LNTSLDKLDEAITHKSYILDHFRQGNFAFEIEGEFEGKLQELKNNMQDMA
SNISNMLSDVQTASSNAVSGVQEISMGNQDLNERVNKQALAIQNTMNHMQ
QMVQQINESLSSATTVNNKSTAAKENTLSGVSIVNRMSEAIKEIEGASQE
IANFTQVIDDIAFQTNLLALNAAVEAARAGEQGRGFAVVATEVRSLASKS
AQAAKSIQAVTQKSLAKVEQGIELSELTKKSFNENAQAIDEISSMMTEMH
QSLNHQSHGIEQVNQSLTEINEITQHNASLVEQVTQTSSHIIESVKGVED
QLLHFKLKPNQMFKSLPSANEELESVKEAEVLALLPEKIS
>Tcr_1784 putative signal transduction protein
MQTLIKQAAALLSTIEVPDLPEVILLLKEELNKKFPNTVTIANLISKNPQ
LLAEFLSLVNTNVTKERMPIRDAKAAVNLLGLDDILNLFVSTIISNTVAK
NELEKSILSHGAKSGLAAAELSYWVYDVSRSQAYMAGLMQNIGAIYLSKL
EPDLYEGMFTASLSNPISAYQNELKHYQTSHVYIGSLLAKKWHLQPEIYK
TILFHHDMDFAVKTVGDQTIKHLTALTILSNYIVSTTEQDQYINQELKEY
RDAAKQVLSLPDNAFTAATAAVNKWGSKGLINASH
>Tcr_1208 hypothetical protein
MAKVNNAESYQQNYAKLQEIAQKLSHSEEIDIDELVPMVDEATRAYQVCQ
SRIEAVEAALNKRLDQESDDEKPTETIE
>Tcr_1580 hypothetical protein
MNHQVIARKAIEHLTKHNIKPSPVTFSIWFLYYLGQNKALISRVKSLLST
GQEISDASYEKLYEVYVLKEHFRDTLGINRNTSQIINKANDLKAKIHEFV
ESIRGHKDTLGDMRESLTVAETREAVEIILSEAIMELKTVETDSVETTLW
MQKNVKELESVQNEVIEIEQSMSRDFLTGLPDKNYFEKTLMEFLKESMSG
VISKRHFIVFDITDLDYYNEAFSWLLGDSIIRLVVKIIQTETDESWEMMR
LSEDELAVFPPPSFPIHKIPDYIERIRTIIHEKKVVVKNKKQEIKNISLS
AVIVKVAVYDDVETVNGKIQKGLDLIKEGQSGKVIKIDE
>Tcr_1382 two component transcriptional regulator, LuxR family
MAKAKPKVLLAEDHDLVRAGFKSILDSDGTVKVIAEAQDGETTLSLIEEK
QPDILIIDLSMPKLSGLAVITQLKKQKNPIKIIVLTAAEAPNVWKEVLDL
GVEGLALKSVSKAELVSGIKSVIADENFIHSEIQPALDAYLAELEGQKTP
EEDSGDKPSRPKKLSVREKQVIKLVAEGYKTKDIADMLEISDRTVSKHRE
NIMTKLGMTASAELVNYASHIGLLKVALDEIR
>Tcr_0208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MSLSKQMMLFITAMLIILLLGTFLLNLNNTRSFLETQLQSHAQDTATSLG
LSLSSVANQEDSSSMETMINAVFDRGYYSHITMRDMDGELIYEKSNAQKI
NGIPNWFIGLISIEAPDAEALVQSGWVPMGHLIVQSHPGYAYIELWKTAI
ALLLWFLLAAAIAIGFAAYALRVMLAPLKEMEKQAEAIVRKEYLLQDSLP
GTIEFKRVVSAMNAMVHKMKTVFDRDAQHADKLQKLAYQDSVTGLSNRRH
FEMNIDALLDKQAEASPGAICLVRIHHLKELNDQFGYMTGDNLVKALADK
MTHNLNFENSFYARLNGSELLTIMPTISGKKLSKPVSEICKAVPKVLKHL
KASESKISISVAYLDYLPGNDRSQLLAQLDFATKEASQLGQNEFFYYQPE
KAHAEEDTRWKSMLNNAIEDKRFILFQQAAYDENRKIHNREALLRLKDEN
NAIHSASFFIPAIRKLNKMDEIDKLAVSLAVTYLSNHRLFHGERLAINLG
QCVIRDQTLQDWLFQQLETVDTNQIAIEIPEAIIHANRNEARPLIEKIKN
AGIHFGLDNFGNRFTNMNYIQEFRPDYIKLDTSFSKAIEEDDQTRYYVSS
VCDMSESLDIQIIAMSIETETQLQAFKELGIHHFQGYYFGAPKPL
>Tcr_0035 transcriptional regulator, NifA subfamily, Fis Family
MKHVEHLDIANQSEYIVIKEAAEQIEKAYEPQKAIHTILSLISRQMGLNR
GRVLLQESSSGFLHTAYAYGLTKEEIAQGRFATSEGVSGKVMHTGSPIII
ADIDREDDYLFRTVDRSTLPSETVAFIATPIIRNGTVVGVLAVNRLAKRS
RSLDRDLSVLKLISLFISEILAVHAMIEQKTQVLKEENEQLRAMALGQGS
QYGIIGESASLRAALNKVGRATNTAVTVLLTGESGTGKERFSRMLHLASH
RQDNPFIAINCAAIPTDLLESELFGHEKGAFTGATQTKQGKIELANNGTL
FLDEIGDLDFGLQAKLLRVLEERCVTRVGATKPIHVDTRIIVASHKDLHE
AVNQGHFRLDLFYRLNVFPIELPPLRERDGDIRLLARHFLNQANQEYHTS
AIYDKGAMAFLEDYEWPGNIRQLENVVKRSVLMADNGRLISARLIEKIIQ
EESAIIHGGHVKPLENQIPTSVKTDSWNTQENAINNSFHQEVNSTDAIGN
KNSMAWAYDQSLMNDKRAYWRVSEEESEQLKQALEMARGNKTRAALLLNM
TPRQFSYRMKKLDL
>Tcr_2144 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
MPTPTSLDGLIEKASVYLKKRHLKQIKAAFEFGAEAHKGQMRKTGGDYIW
HPVAVAEILADIQLDHESLIAAILHDVVEDTPYTKQDIIDRFGENVAEIV
DGVTKLGKLEFDNPQEAQAENFRKMVLAMSRDIRVILIKLADRLHNMRTL
GVMRPDKQRRIARETLEIYAPIAARLGINAIRIELEDLGFKAMHPFRFAV
LERAVKKARGNRAEIVEQINEAITNRLHEENIPANVIGREKHLYSLYKKM
KYKHLSFDEILDIFAFRVVVNTADECYRVLGSVHSLYKPFPGRFKDYIAI
PKSNGYQSLHTVLFGPFGAYIEIQIRTNEMHEVSEHGIAAHWVYKQDATE
DGRAIEQPLSAVEIRAQEWVKNLLEIQQGAGNSLDFLENVKIDLFPNVIY
VFTPKGDIITLPAGATAVDFAYAVHTNVGHGTVGCRVDKKLIPLRTHLES
GQTVEIIRSKELQPNPSWLQFVTTAKARSQIRAFLKNQQSASAQALGKRL
LEKGLRNFNMSYTGLTDVIREGIVVEFKLESWDHLLEEIGLGKRLANLVA
KQIHDVVLGSDDSIFKSHTTEDPSQPLVISGTEGMAVNYAGCCHPIPGDE
IIGFISAEKGLVIHRQECKNVKQFKNHPEKWLDVNWEENITQTFDVELQL
EILNRRGALATVASNIAEMKTDIDRVRSEDKDETYSLMNIVIRVHTRKHL
ADVMRKLKRLPIVEKIQRL
>Tcr_0574 methyl-accepting chemotaxis sensory transducer
MFIGIFGAVLFLLVSNLVAQYIFGQTSKTVNEVVNENQVKVTLLNELKNL
TDERAILSRDLVLTEKEDLIESTKKRLSETRGEIGDVFSSLEKMSLGAKE
QAYFEAIQQNVVAANVSFGSFMVMVDEDFKEDAADILMGEFGDKYQAFTD
IVADFKQYEEQKNTLAVQELGEQEHIGVISLWSVLGVSVLIFSVAGFFVA
RSFLKPIIAMRETMTRIIQTGELNHRVEIYSKDELGETSIAINNLLETIH
GAISDVNSLMGEVSQGIFERTIEHEYKGDFLTLKKGVNQSVVQIHNMVLM
LRDTANNLRNGVLEPVKSNETVLSGDYADVMNDIEVSMNRIGETVQDISK
TLESLSRGDFSKRVTADARGEFITLKDAINTTVEGLEAFVEEVALVQTNI
SEGDLTKLVTGSYHGKMAVLKDTLNSSTRNISEMIGKVGSVTRLVADESR
SIADGSESISTRIQQQTVSLERTSTQMMQMTNTVRSNADSANNANHMTQE
AQKKLTEGVQIMQKALESMDKMSAASQKINDIITLIDGIAFQTNLLALNA
AVEAARAGDHGRGFAVVAGEVRNLAGKSSDAAAEIKKLIENSVAISDQSG
HYVKETSDALSQLNASMDEISSMISTIAKASNDQAVGIDNVSQAISEMDS
TTQQNAGLVEEAAAGSQDLLQQSSDLLSLVREFKVDNQVLQRVERIQQSD
SAKEFEKMVQAHLAWKSKIRAFVDGMDIGVTYEVATDPTACALGQWYYGE
GQVYSDLPLMETLGEEHKEMHLAIKRVMDAKEIGDEETMDKELTQVDKKS
EVVVGLLYQLMEEVG
>Tcr_0205 transcriptional regulator, LuxR family
MKQLLLYVQDPHALKNWSKVSSLPKQILYTLEMDSQVHPITDHLLMIQLT
DSPANNVEIENVLQQGYTVLLFSNQPTAEEGMDWFKKGIKGYLNTFAQPS
RIDQALNTILAGNIWLGQNVMQSIIQSVSASQPLQNDSWKELLSAREIET
MEWILQGKSNHEIAEQMAISERTVKAHVHSLLEKLDAKDRLNLVIKIQNW
HKNAL
>Tcr_0195 response regulator receiver domain protein (CheY-like)
MKQANLLIVEDDLISLKLLQSFLKTENFTLYIANDGEEASHLIRQKPKDF
FHCIISDYLMPNKDGIQLLEELKEDPEYKKIPFILQTSANSEAEIQRGIN
AGAFYCLIKPITKETLISVVNAALKDFKNHREALTTIEGINTAFPLMKSG
HFQFQTLEEAKHLSNFIAFLTKDPDNIGIGYLELMINAVEHGNLGITYDE
KTQLINESRLHDEIAYRLSLPENQEKYVTVDLDHSDSDLTVTITDMGSGF
DYEKYLEFSIERAMDNHGRGIMMANKLSFDALAYSEGGRKVCCKTSQLKI
>Tcr_0759 methyl-accepting chemotaxis sensory transducer
MLQIMKQYWGAWLVTIVGIGLTFVEIPFIGAIVAVLVSLTWTLTVARIAR
LGGQPQQAATPSVSARANDFDAEVIDDALQVIMNDIDAVVDQEVEVVRGE
LLQVKELVAEAIETLSNSFSGLHSQTQAEYQLVVSLLDNLGGSGEGMSIQ
KFSSEIKEVLGYLISLLKSSSQRSNETVGKIDDMVEQIESIFILLEDVKG
IADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLSLNSNLLNEQIRKQ
AEKAKQTVDHVRQLVSDTAAKDMQEANTSQEQVTVLVTDLEDMNSGISDK
LGDVSGIISEIEVSVSNAMRSLQFEDIVRQLVEQVLNHLENLSGFSHKIN
HFIEESKNDPVKSVAEHKARLESFRNTIHQEREEIESKRMRRVSSDSMEE
GEIDLF
>Tcr_0474 PhoH-like protein
MTTLHTIQFHLTPEDNDALANLCGWHSEHLSQLELRLGVEINHLGFKFSV
TGLADRLVQAEQFIRDLYQMAQKEPLDPPKIHLALQSLGFDEAKAMDDDQ
LLIKTRKKTIKTRNANQANYIQSVKEYDVSFGIGPAGTGKTYLAVATAVE
ALESEQVRRIILTRPAVEAGEKLGFLPGDLNQKVDPYLRPLFDALFEMLG
FETVEKLIEKHVIEIAPLAFMRGRTLNESFIILDEAQNTTTEQMKMFLTR
IGFGSKAVITGDITQCDLPNHQRSGLRHVIEVLEGVPGIGFTFYQSQDVV
RHNLVQKIVQAYDQFDRRSAAK
>Tcr_0986 BolA-like protein
MSPEKIREMIQSVIEDAQVKMTGEDCNFAIEVISASFEGKSPLQRHRMVN
DIFKDEFASGALHALSIKTKLPE
>Tcr_1271 response regulator receiver (CheY-like) modulated CheW protein
MSTTLEQVEKTAQLSKNNQMSLMIFQVQFPREGAPPPPYYGMNVFKVREV
LEARVYELADMPDANPLIEGMIELRGVYLPVIDLPKWMGFEMSEEEREKS
IIIVSDFSHNFIGMRVAHIHGVEEKEWTDIKPATNYNVDVNTNQVINHTY
LENSDKLCFILDIEKLLIEAMPSMAEKIFSSAKEVNSEEHVFTDEVTNRK
ILFAEDSKSIQQYMSMVFDQLGLRYQGFENGRLLMDYVNSLEDMDDISMI
FTDLEMPVASGHTVIKELKANPKTRNTPIVVHTSMTSENNSREVLDMGAD
HFVGKVDTNLIVETIKKIEDKYYKK
>Tcr_1222 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MKQNFLTVKHWLLGSVRRQLVVGMVVVVSTLLAIFIWEVTREQQNVMQEL
KIDQAKGLAQNVATSTAVWVASRDFSGLQNIINGLNKYPDITHAMVLNLN
NQVLAHNDLSHRGQYLLDMPAKPEMTVLHLNKDYIDLVNPIMLSGQHIGW
VRIGLSQSADLKRFEKIKFSAFAFLLIAVTLAALFATVAARYLTRRLYAI
QTVADEVKQGKRSLRVKLDGVDEAAQLAKRFNIMLDTLVKRENEIVESHQ
ALEQSEKRLNQIMAVNHEGIWDWDIKADKVTHNQSWADMIGLDDNLLVHP
AQVFFDAVHPDDRERVSRAVGECFKSKSHYHMEYRFVQRNTGKEVWVQDR
GDVVEWDAEENPLRMVGGFYEVTERKKAEEAIQNLAFYDPLTQLPNRRLL
QDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLRQVATR
LRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNK
PYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVR
FYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQINSNGQIIGAEALV
RWRHPQKGLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQPATA
QITMAVNVSARQFHQIDLVEEVERIICQTGANPQLLKLELTESLLVKDIE
DVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKIDQTFVRDII
DDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLF
GRPVPIEEFFQNTAL
>Tcr_0758 response regulator receiver (CheY-like) modulated CheB methylesterase
MSKIKVLIVDDSALVRQMLQEMLKSDPEIEVVGTASDPYDAREKVKQLHP
DVLTLDVEMPRMDGVTFLKNLMRLHPLPVVMISTLTEKGADITFEALDLG
AVDFVAKPKIDLQHTFEDYTDEICRKVKTASKVSKWQLERQYARYVANKE
SKPKVLSKPGSLVSKVVEKFTTDAIVPKKAPSDFSKPSHKVIALGASTGG
TEAIKEVLMRLPSTTPAIVITQHIPASFSLPFAQRMNSVSEMEVTQAEDR
QPILAGHVYIAPGDKHLLVERTSSGYICRLNDGPPVNRHKPSVDVMFRTV
VQSVGKNAVGVLLTGMGADGAKGMKELQEIGVPTIVQDEKTCVVWGMPGE
AVKLGAADYVLPLGSIPEKILALIKK
>Tcr_1446 sigma54 specific transcriptional regulator, Fis family
MKEERLSSLVGNGPAMQQVKKLIQQVAKTDATVLILGESGTGKEVVAQSL
HSVSDRFDRAFIPINCGAIPGELLESELFGHEKGAFTGAITARKGRFEMA
EKGTIFLDEIGDMPLPMQVKLLRVLQERMYERVGGNKSFECDVRVIAATH
RNLEDNISDGTFREDLFYRLNVFPIEMPSLRERPEDIPELFDFMFNKIQS
SGRTIPKLSEKAMIALQRYSWPGNVRELGNLAERLSILFPDLTVDYDDLP
VKYQVELEEDASLIRVDSTILESAKPDVSDSMSEIALSVTEPETTQQMME
NSENTSSLGMPDLDSGLDLKSYLVEMEVQLIQKALVQTDGNVSQAAKLLQ
TNRTTLVEKIRKFNLS
>Tcr_1769 HPr kinase
MPSHLISDLKHYIASEALEPESITIALPGFSIEISSNSSSLLKTLKIYFK
PVLVPAPITAPSLKVIAYENDQFIDRGIQWQDWKREAGKSGRKDSFIDVQ
EKNETQRLIYKVKTGVLFWQKSDTPVAIGPVEQHPNQIINFILTQYLNEN
LRQGWLLGHAAGLEIHHKGIAIAGLSGGGKSTLMLHLLEYGEHFISNDRL
LLNAQETARPGYFWMRGIPKQPRINPGTIVHNARLHKLISQERRQELLAL
PTETLRQLEEKYDADVNTLYHSNCFKPEAELNAFVILNWASDSVDKTQLN
RTTLNQSPKLLEAILKSPGPFYSDSDNVFLANQTQPDAADYLNRLGDIPC
FELTGRIDFQKACALVLDAIQTL
>Tcr_1212 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
MDSAQTLYQTIFKTDEPDPLALQACQMALEAEKEEHKGLVRSIDAAIILS
DLKLDRDTLIATLISDMGLEQRYPIEKISDEFGDHIAQMVTGVRRLNHFK
EFHPATTSNEVQTERLRQMLLAMTSDIRIMIVKLAFRVARLRTLKNEPEA
IRQQIASETQMIFAPLANRLGIAQLKWELEDLSFRFLQPDTYKEVARQLD
AKRHGRETYIQGIIQSLEEMLKDSGIEHHISGRPKHIYSIWKKMTRKNVP
IDELFDLRAVRIYVDTVQQCYEVLGMIHSRWPYIKDEFDDYIANPKENGY
QSIHTVIIGAENKTVEIQIRTHEMHRHAEFGVAAHWRYKEGGKSIDPALE
QSINLVRQMLEYNDNPDLLNEISTELLTEHIYVMTPKNEIITMSKGSTPL
DFAYQIHSELGHRCRGAKINGKIMPLTYQLNTGDTVEILSVKGGTPNRNW
LNPNLHYLGSSRSRAKVRHWFNQQNKEANTESGESLFNKEARRLHAEHIS
AQEVAERFKYEQLDEFYEALGKGQINERQLTNAIQKLIKPEEDKPQARPP
SFPPEEQTEPGKAFVIGAPRLKTTIAPCCEPTENDQIVGYVTRGRGVTIH
KKECANILNLTFEEQKRLIEVAWYNAEPQGTTYEATLQILAFDRKGLLRD
IMMELTQWDINVNNSDTRTDKSDGSVSMTLDVDVEPHTNMGELLDQLEQI
QNVVSTSVNLNKQQAS
>Tcr_1897 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
MTNPNRPIIDEQVTIPEHYRIISRTDPRGTILEANSEFIEISGYAADEIL
GQPHNILRHPDVPKAVFKDFWETLQAGKSWTQIVKNRTKDGRNYWVKANA
APIFESNKITGYISVRTPATEEQIKLASQAYKDINAGKLIIKEGHIYKAS
EYGRLKMNPFRKFSILGKLATAGLFLVIVGFLVSAFLANSTYVETVAENS
KVRSQQVKKDINNYVQRMERTSLNTALGLASNADIIAALESGSYEMANTA
LQKELNFIKNVSGQAVRAHIHDAQGHSFVRSWRDKHGDDLKSFRYTVNQV
RDKKTSVTGIELGRAGAAIRSLSPIFSDDGSQFLGSVEVVSSIKALVKHF
KEDAINYVSLFTPNALDIAIKAKDNPKFGNLTLASTKDFAPEAIEKLKQV
DLNQLKSQGVLTTATDFFVMMPIIDTNQSLVGYHIFIEDLSQINTLNKLS
LEAAISSVAKVTLSMLILIIIFLLIIRNSVTVPLRKIVKGMNQATETGDL
STRVDNSRYDEMGELAKAYNDQMQAAQVSLGEAGRMLKDMSEGHLKTQTV
IPMVGDFNVMKTNLNEASRMLQKTFGEVRGILKEIRLGNFSYESNHETQG
DFKEAMQDAEAAMAILKGVFYEVNELMAQVAEGFFGKRITAEAEGEIKEL
KNNINASLDQLEAVIQETTQVMIAQGTGDLKKRIEMETNGTLAVLKAGIN
NSVTNIGSLLSQSNYSIKKLSDGTIKISQDISDLSARTQQQAASLEETAA
SMEQITSTIQQTANNAREANEAANESLVEAQDANQVVQKTITSINEINEA
STKISEITTLIDSIAFQTNLLALNAAVEAARAGDHGRGFAVVAGEVRSLA
GKSAEAAKDIRQLIDNTVEKVHEGAKLADESGKALELINSSIAKIGNYVS
EISQTTAEQAKGVEQVNIAISSIDQVTQQNSALVDETAERTTDMSRLAED
VNNVISTFKIDLNQIGFSTAMQTGEFTFANARRAHSQWKGLVTAYVEGVH
VEFDKEAATDHHKCALGQWLYGPEGQQHANKPEMQTLEKWHAELHATIKR
ILAAHQVDDTESIKKEFRNLDKASEEVIHSITQVEQSLANDRTRHAAQQP
RAMKSTPAPKLTQEKPKTTPSKKEETTSKQSLGTTAKPSQTNAKVDTDKG
MQKPAPSQPKDTSTDEWSEF
>Tcr_2008 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MHTELEEKHLKALKTSHSQTLEIINRFDEGVALFTADASPILFNQPFKDY
YPALESPQKFYQEIVLFKQKHRGETFDLKTWLQALHQNKEAPHCQVWLKS
SQRETAVPVRLQAYWIDLHTTPHILLIVTDQSLNKQITAQNKLMEASYAG
QFVTNSQGYIKQPNHAFCAYTGLSHQALNELTYLDWLKQQVSFKVPFEKV
VSSLLKEQFWTGEVQIHTAGDSTFYAVLSLSMILDDSKNVEHFIGVLQDT
TDIRAAQAEIQQLAYFDKLTGLANQTLLYDRIEKTLQDKTSATPYRALYL
INLDGFKIINDTFGHTTGDQLLMLVAQKLKQQLPEEAMLARLSGGSFAVL
YTSKTQDVQYAKEDIHQYGELILETIDDRYKLEKHSIHSAASIGICTFAL
NQPVSLDSDQLTRYANMAMHEAKKLGGNQAYLFEDTLIQKAKRRLELIEA
LNHSELDDEFQIYFQAQVDKDKKIVSAETLLRWVHPKLGVVSPSKFIPVA
EEGRQIIKIGLWVLHKAFLQAKAWNTVHRSIRIAINVSPVQFHEQSFIEM
IIGLIKFTQVDPKTITLELTEGVLIKNAKLALQKIQHLVSLGFEISIDDF
GTGYSSLSYLQKLPIHELKIDQTFIKQVPGNIDDEAIVNSIIQLASSKQL
KIVAEGVETNEQAQYLINRNPEMVLQGYLFSQPLPAVEFEQQLIKSDARH
KTA
>Tcr_1119 putative signal-transduction protein with CBS domains
MSIQQQLNFLKQVEPFSALSLKELTRLASALDVVYFPLKTTLELSSHASS
KQSTFLYFVIKGHIAEFDENNRQRAVYGANTFFGDALLLKRESYLRYEVI
EEAIAYRLPQTVFLELVSQPEIQGFFIDDITAKLNRLHAQIQAESSSEAL
MGIVEEAPLQSLVEVNESASIEECVQKMRQYQTDACVVRFSASNDVGIVT
SIDLLNALALDHLSVKAEVGSLATVPIVSVHQFDYLFNALLKMTKFRINR
LVVRSDEGLVGVLHQKDLMGMFANQSGLVVLSIQQAEKMDDLKSVIHQID
ALVINLNNRGVKTHYIAKLVNELHRKVMEKVFEFLKPFPELQSGCLLVMG
SEGRAEQVIRTDQDNAFILPDSAKNLPGLVDFMQEFTHSLIALGFPPCPG
NIMVSNPAWCQTLSEFKQQLREWMMQPTAEAFMNLSIFFDADVVLGDDSL
LLEAKQVMLNWVAANQHFLPHFAKPVLQFETPISFFGKLVTDKKSRKSQI
DIKKGGVFPIVHGVRCLAIEKGILKTNTHWRIKALMQQGVLTDAFGIELG
ETLNFLNTLRLESMVDQVRRDQVPDNFLQVSDLTPIQQDLLKEAFSVVNR
FKKLIDHHFKVSAVL
>Tcr_1095 response regulator receiver domain protein (CheY-like)
MNKVLYIDDASSMRKLVNLVIGKEFELTLAENGQQGLEALNETAFDVILS
DVNMPVMDGLTFLKKARALEAYRFVPILMMTTEASAEMKAQGKALGATGW
IVKPFNPDNLANTIRKVL
>Tcr_1039 response regulator receiver domain protein (CheY-like)
MTRILVVDPSYSNRLYLKLTLERAGYQVFDAKDGKEALNQFKQFQPHLVI
TEIDLPLLSGESLVSEIKSLTEETFYPIFVVTNVTSPESIQEILEAGADD
FLQKPYPEKLFLAKVASLLRNLDFYNDLKNSKELVSTLHSSLELEHKSAE
RIFEKFVHGPRKEVPGLKTHISSASIFNGDVFLSSISPAGNVVTLLGDFT
GHGLPASIGAIPVAEVFYSMVRKGRTLKEIVSVINEKLLLILPVHVFFSC
TVVKVLPKHKTAKVLNAGMQPLIMVDDKTREVTQYHSTCVPLGIVASDIL
GIELTEVNLKGHEQFILYTDGVVEAMNCDGEQFGVPRLIDALLNTAELDI
TLLVEDSQNFCSCEPFTDDVSIIKLNIEEIFKAEFNEISEVVSEKIPAPA
DWNLSYCLSANVLKQNDKPIESIIDAMMGIQSLVNYKEDFHIVLSELFNN
ALEHGLLQLDSTIKQQDNGFFEYVQQRKRALSDLESGEIMIQIKHTALSE
EKGKMHFIISHNGKGKVDLEMDQRISDSSFFGRGIKIVQSLCNEFYFKKG
GAQVEAVYEWESVQYAS
>Tcr_1820 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MEKVVLPVEKCKGLQNTHLGRELQQVFEHQAISTHFQPIVGLKTRSIYAF
EALTRGPESSALYSPANLFTVASEHNCLLEMDLMARRVSIKNYMKTVSTH
QNQAKLFLNISVSSLMNTEHRTGLTLDCLQYYGLNIRQVVIEITELQPVE
DSGLFLNAIKHYRKMGFKVAIDDLGSGYNGLKLWSEVKPDFVKIDKHFIA
NIDKQADKYRFMETILTLAKSLGTKIIAEGVETEAELQILEKLGVDFVQG
FLLKKPSPSTALTLDYQWRESIKDIASPKETVKLLCRDAFTMSPDTTVDA
ITEELLHRPGVEFVPIVDQGRVHGVVWRRELIELLASKFGRDLHGRKNIS
KVMDKAPLIFDWNTPLVEVSREITENGSYDKGTFIITEKGLYRGYGSFME
LLRVITDLKIRSAQYANPLSGLPGNVPIQNTLQEYLDKQLPFVVIYVDVD
NFKPYNDHYSFEQGDQVISEVAKVLQDAIGEQPGFIGHVGGDDFVVVIPM
LAYQEICQRILTGFQAATASFYTQEDREHGGIYTEDRSGEQVFFPMMTLS
LGVLLVHPGVFDHTQKLSSYATRAKKGAKSEGGNTYYVVDSRQVGLLRA
>Tcr_2048 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MWRKLSIKVQLMIWISAVTFMIAFGSLGIAFWLDVKQRETLAASLSTTVN
SALRHDLLKGILSNDASVYSDLSFRLAGFQQIDRVLLLNDQNKPVFNYLH
TNKTYQNLVDRSTETPQFHGEDLFVKHPLIEDGYQYGSAVYVIDMMSFST
QFEKHLIFLFIALPLELLLALLFTWWISRSYNQPFTQLVEAMKHNDVGLN
QFSPVHTDAKNEIGALFSGYNEMIHKVEATTEQMRYLSEHDDLTGLYNRY
YIELLIQKALQDETAQHHVLLNIDLDQFKLINDAAGHSAGDELLKMVAHS
CQDMLPDSVSMARIGGDDFYILLPNHSEKIGKAIAETLLEHLSDFRFSWE
GQAYSVSASIGMVAFKPFEYTLEELVKAADSAFYSAKSAGRNKLHIFHSE
DEESQYYKHEVQIASYIKEALAQGASPTPSKNTAYFELFAQGITPLQHNN
RDEVSYEILIRLRDVKGNLIAPDAFLPTAERYQMMADIDGFVLTQYLNRV
QSLPTHLTKLHKAHINLAGSSLNNADFQARLKQLVSEHPHFPWRKLELEI
TETSAVGNFNQAMPFIQYCQALGIGLALDDFGTGMSSFEYLKSLPFDVIK
IDGSFVKDMHSDPSDKAVIRYIQEISALRNQETVAEYVETQEDVDVLTEI
GITYGQGYFLGRPKPLTEWLT
>Tcr_1080 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MRQFKVNLWTLFYLIAISSFGLLIWLSLNTFQHEKKELHDHLLVDAKFLS
QMAHASLAEKELSLDVLGSRLFEDQTYLDKTESQKILDKALELTPSLIGF
GVFSSDGTLLASSSNIEHDITPNIATHTATKESFLRTLQSHNMVIGKTYF
FNPLNSWIIPIRKAIRNHEGKVMGVVTAGLKIGKNGFINQNHALKGRNIL
IVNDITKNRILLTGMPQNTYPKLYRDPIPTETIQKVQQFFKKEYNLSIDD
VKQHTETTFLEFYSLNTQQEVAAATLYDPLYQVWFVLFQNKKNLHDEVFH
TITVYFLVFMIILVLIYQLFSIIYRNERETKQKLVHQLTHDRLTGLPNRE
YIDVELKDPLTTPQNHYDLLFLDLDNFKDINDNFGHEIGDQVLIEVANRF
KQVLDEQGWLIRFGGDEFVFIKLPVKTELTVFAEQIMTTLSDPFIIEDMR
FNIGASIGIASYPGDSEDLQTLLSYADLAMYEAKKHKNTFTHFSNHLRED
ALQKVLVEHLLKQAIQDNEISIVYQPQLNVKQEMIGVEALVRWQNDTLGE
VPPSTFIPIAEEMGFMPELGRHIADLTLSEMGQLQRKLHQSFEVSMNISV
RQFMSIGFYEDITRMIDESALKPELIMLEVTESIFMEELEFVIDILEKLK
SHGIMFSMDDFGTGFSSLSLLRTLPINELKIDKSFIDDVLQQEKNYGLVE
NIIEIAQKLKMQTVAEGIENEAQAKLLEKFGCDIFQGYYFSKPLSYAQLE
TYLQTTPIGKILNTVKN
>Tcr_0754 response regulator receiver domain protein (CheY-like)
MSKILAVDDSKSMRQMVSMSLKSAGHDVTEAEDGAMALDIAKKEQFDLIV
TDINMPNMNGIELIQAVRTTLPNYKFTPILCLTTESSGDMKTKGKEAGAT
GWIVKPFSPEKLLSVINRVL
>Tcr_2190 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MTIMKHHPDPETRTTQGQQPLVVSQFMHIGLETCTPDTCIKDVIGRLSEK
NIGSILIEESGEIVGIWTRTDLLKLDFSLPDILKAPIRSVMNSPVCRIHK
DELISSATYLFHKKQFHHLLVVDCDEVPVGVLAESDLVQAQSCESFLDGI
SIQELLAGHLYFIQADRGLDDVLSMMSKHKVDALVVEDVDQLGIVSMRDL
FKCFAQQTDYNTLKVKDIASWPLISVLQSQSLSYVRQFMIQHKFHHIGVE
DENGKLLDLISFSELLHRIEENFYYQASLSIKEKEQRILEAETLYRDLLS
MSLNGIIIYQDDEIAFANHAVHQLLGYEDNALLGSCLLKLIPDIQQSRFL
KRLQQIDQHHPDFIEQTILCQDGSEVMVEMTHKPITYHAEPAHLIVVNDL
SFRQESERFQMLTRSVFDNAGEGILVTDIHNRFVVVNKKFEEITGYSQEE
VLGKNPSILSSGQQSTLFYQAMWQELSEKDTWQGEIWNRKKDGTMYPEWL
TINAVKDKQGRLLHYVGLMNDLSQQKATEQEITRLSFYDILTGLPNISLF
KNRLQQSIQMSVHEANQVALLIVDIARFKMINDAIGYEHGDQLLKGVAQR
LTQLLDAEDSVARLGADNFLILMESFQNKQDVSHFAEEIMNAFSLPFEVE
GHEHVLDIKIGVALSSIDGDTALDLMKSADEALFEAKKLPHSGYVYHSSE
LAATTSEYFFYEKALRQAIDNQELVAYYQPQIVLETNQVVGAEALVRWIH
PEMGVISPAKFIGIAESTGLIIPLGREILLQACQQWLAWQQQGLTLERIS
VNVSTVQLMHSGFVQSVAQVLEETGLDPKHLELEVTESFLLQNEQEGIAV
LHALKALGLSLSMDDFGTGFSSLSYLKKLPLDQLKIDQSFIRSLPHDKED
LAIVDAIIAVGLAVGVEVIAEGVETEAQMEYLHKKGCQLGQGYGFSRPIQ
QQEFLQWCQTFHS
>Tcr_1234 putative prophage repressor
MSNVAYLIPKRNQKLQLEAADPVELVEYDFVQVPLLGWTSAGEPIQMEMD
YDTVSVPHSMVRKETFALRVKGSSMIEENIEDGDIVIIERRSTAENGESV
VVRINNEEVTMKKFYIEKNGIRLQPANADMEPIYITNENIEILGIVTGIL
RQP
>Tcr_1329 hypothetical protein
MATKMNTPQKVNSCLQYIDNRLETTSEQTIQIAEMIIEDIKNLTQAYPEA
IRNNELRTHAEKVRDTQMKWVNQLHEIILEQTDRDLNGQVIQALQNFMNT
LNKKQLKHLDFDLPAAVRREQPETEHEYLSQEEIEVLMDSHLKSGHTSST
HH
>Tcr_1911 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
MLTAQNDQENRLRALKNGASDYVMKPFNRHELLKRIEIQLENWQMKMMLK
EQNRLLEQKVQERTQALEDAHHEIIYRLGRASEYRDNETGNHVKRVSYFS
ELIALEAGLDKKEAHMIRIASPMHDVGKIGISDTIMMKPGKLTDEEYLEM
QRHVEIGGEILEGHDSNVLKTAYEIALTHHEKFDGKGYPKGLSGKDIPIS
GRIVAIADVFDALTSERPYKEAWPVEKAVHLIKSEKNKHFDPELVDCFLV
VLPEIIKIKEKYSDKDSI
>Tcr_1504 SH3-like region
MIAVSASAVTYSSAALSEVQSGYTHYVTDSIEIPFRSQPGYKYKILRMLK
SGTKVTILEVNDDGWARLIYNHNGKDIEGWMPSSVLQNQPIAKVQVQKQE
RKIAKIEKELNQLNLEKNTLQNRFNDTAKELKEVKQDNFELNKQLEEIKA
ISGNAIQLNNENKQMAQQIEKLNNENAIMKEQIDQAKDVVQRQWFLTGGG
VLLLGLLLGRFFRVPNRKNKWNTL
>Tcr_2180 PAS/PAC sensor hybrid histidine kinase
MLKHSLSALLLLSALLPFSAQALTLNSSEQQWIKDHPQITLGSDYNWPPY
DFKDSAGKHNGISADILDRIRQITGLKIKVRSGVWSTILEQAEQGTLDGL
ACAVKTPDRAEHLYFTAPYTSMPLGIFMQDKSTSTSIKTMDDLTTQTVTI
NRDSYMHEWLKQNYPHLKLYLVNSNAEALEAVSFGKANVYIGNMAVATYL
IKKNYLTNIQAVAKINHFKTDTAIAIHKDKPILFGIIKKALKEISQKERN
TILEKWFIKSKTTYIDLSNQEIAWIKAHPVIKVAGEPDWAPFDFVADNTY
QGIANDYLNLIAQKTGLNFHIDIHSWEQNLTLLKKQQVDVLPAAYFSAER
TSYAKFTTPYYKPLTYFFVRHDLKASSLNDLENTTIAMPKGYLHIDFLKQ
RFPNITILETDTLNEAINAVIQNKAQVLYENYAVLSYILSQSGINTIKPL
APAKQANQSLHFMIRDSAPELASIMNKALASITPQERKDIEERWLTIAPN
KINITLTPAEQNWLNQHAQVSFTGYPDHLPYEGFKSNANQPIQHQGIVSD
FIHSLESHLPLQFIPRAYKSWPDTLKAIHQTPVDIISAEIDTPELLAQYR
PIIPYLTTPMVIVMKNQDTFVNTLRQLTTETIALVSNDATSEKLLKQYPN
QHFKTWPNAKSVLEAVAFNKADAAILSLAKASYLIKQNHYTSLKIVGKTD
VQKQFTLFVNKRYPELFSILQKSMPAITEEHGSGILSQWTKIKFASKFDY
ALFFQMFSFLLVVIGIIFFWNRRLTKEVKQRLQAEKRLKENETQLQGLID
SIPLMIMVTNHQGKILSANRQTLKNYQLNFQELSELNSTTFYSDPDDRQQ
ILNALQAGEQIHQKIISMKDADGIPRKMMLSVLPIHFNQQPANLSIAIDL
TERIQFEKELQQAKEQAESASQTKSQFLANMSHEIRTPMNAIIGFTELLN
EQVTEPRLKRYIRTIQAAGKTLLTLINDILDLSKIEAGKMDLDKKAVNPH
SLFDEIGQIFMINIQRKGLDFLVDIDKTLPEGLLLDGVRLRQILFNLLGN
AVKFTEQGYVKLKVSACDVDEHHSKLDILIQVSDTGIGIPEDQQARIFNA
FEQRENQDVQKFGGTGLGLAITQRLVNMMGGDIWVESTPGQGTTFNLLIH
HVDISATNQSDQPNSDERPVPQLIEFHPTTILVVDDIDDNRALIKQNFVD
TDVTVYEAQNGEEAINCFHSEKGISLILMDLRMPIMNGYQAAEIIKQKSP
STPIVALTASVMTETADAPKRQHFDDYLRKPVFKADLFNILKKYLPHEIL
TPTPEFSETQEVLSDKAKLNAPQFLEAIQEQLSPTQKTILKTNNIEEIQR
FAQTCEALADQYDSKTLKTYATQLLEATESFDIKAMQQLLKYYETLEARL
DKLLNDAISP
>Tcr_0028 diguanylate phosphodiesterase (EAL domain)
MTTHFPIETIKSGCSQCHTPLGFEFTFAFQPIIHVFNKEIWGYEALVRGL
EEKTAWSVLKRVNDDNRYAFDQACRTKAIALASQLKLDKMLSINFLPNAV
YEPKHCIQSTLKAAKEHQFPLEKIMFEITESEQVVDRAHLTNIFEYYQSQ
GFTTALDDFGEGHAGLNMLASFVPNILKIDMELVKNVDQSPVKQAITKNL
IQMCNDLNVTVLAEGIERIEEVNYFKDLGVPLMQGYFFAKPGFENLPTVN
FSSLD
>Tcr_2131 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MIEFAQKTALEPLLDHLKFDRRIASSSTFDAFPDISANEKSSVKRLLSEL
QHKFSDSVDVAYLIESEVSSRTAELYRRANYDSLTHLPNRAHLHDILENM
IQGTAHKNSVFSLLFLDLDGFKVVNDTQGHHIGDELLRHVSGRLISSVRE
GDIVSRLGGDEFVILLAETENRAEVEEVCQRIINEVSRPYWFDGQEVRTS
TSIGISMFPQDSNLASELIETADEALYVSKSKGKQTFRFYNDVKQEVPAH
KHIVQAQFDAAVLNSEFASYVEPQIDLKQNRVVGGHVSIEWQTADEGQKA
LESWQHLLAGNPAEASMSLWLLDSACFYLKQWLKADAEFVVTVPILETLW
RQEGFAELLNQRVKQYGIPSSQLQLAFSLKSFDVFDQDLRDCLQQLSDQG
YQLTLTGLGGQAFNFAMLVGLNIQEFKFDEIWLHEQLETRSGQQWIQALI
QMAKSLDACMIATGITSESQVQHLTEWGCTLGQGTYWSAPIEAAEFKQLM
V
>Tcr_2024 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MLSIRYFFVIALVTIITVFYGVFFYYYLDDEQKKADLIVESIRHDLSETA
YVISSEVKAPESIRSFKSFLHRKVANNPLISALVVGYENKVILTTDPSIQ
SLPTDLAIQKKLMSLTPNALKQHPIFEMDINFFIQDKPSYLNLYLYVDQT
YIQKYFAESQHNFFLFFGLVPFLMLMLLWFVLRKYVTSPLEFLRQYAYYQ
SNVPSKFKLRELEYIRSSMVQTFDRLDNEKNELYRQARTDNLSGLANRNH
LNERINWLISEYSRTGQEFAVLFMDLDNFKTVNDMLGHEVGDNLLKNVST
IIQEVLRDYDIIARVGGDEFVIVLNYYQSNFELTHVINRILDRISEVHMV
DSHPVKVSASIGIVCFPKDGDNISTLMKNADIAMYEAKNSGKNRFKFFTE
SLHKQVIGEIQLEQDMQRALKNNEFELYFQPKICVNDGSVVGAEALVRWN
DPKKGLVPPNDFIPAAEKTGLMVPLGHWVLKTAIQQQVTWKEQGLADLQI
SINLSPVQLLDTLFDRKLQALINQSGVDPTKLDIEMTESQFMENTEQNLH
SLSTMRKQGINISLDDFGTGYSSLAYLKKFPIDTLKIDKTFIDDYATESG
AIFIETIVKIAHTLNLNVVAEGIEQEAQLNYLVQTGCETYQGYYCSAPLP
VSEFEAFLKSRTPVK
>Tcr_1038 anti-sigma-factor antagonist (STAS) domain protein
MSLTSRVTEDAVNIYVEGNFDIGCYDEFNKALNDNLNTSSKFVIDLSKTT
YMDSSALGMMLLLREKLGGQSSKVEFINVNDSVMKILCDAKFDQLFTINP
>Tcr_1139 dual specificity protein phosphatase
MPKPRAEQLQQDILSYKEQGVTHVVSLLKPTEVEAFQMTEEAAVCKAHQL
SFTHFPIKDMDVPEISALKELNLQLKQQLAKEGHIAIHCHGGRGRAGIVA
ISLMIEHGYDATEAMKIASEARGDKMPVCDLQVEFIHAYR
>Tcr_1040 response regulator receiver sensor signal transduction histidine kinase
MPHKILVVDDDIRQIEAYKSLFSLDDDQPVNTLGTFFSDTEQQTGNDTDT
TLLGLFRLITALQGEEAIEKVSVSLVEEAPIKVAFIDVRMPPGMNGLDVA
KKIREIDPRVYIVMVTAYSDFDLSEITQSLQENVLFVRKPFQSEEVEQMA
LNFVRAWDKDRYIEQITETLGQKVKQNLFEASMYEVSNSLLAILADHVNA
QAGLISYLNNEFDVMPEQKSAYKQITQTIFGEAQHLSQMVSSLQRLSMSS
DKVMVFSLKDLVNYLLSLMPELNALPEHIEFEVECHFDQEISFHLPYSCL
ILAISAAIRNALDSVFARALKTPGFNGSIRLVIEKKREGENEVAIIRLID
NGLGVNKSDLNKVFKDGFSNKKNASGVGLTLVQQFINRVSGDVSFYSAGR
DQGAEVRLQFPFRIDMT
>Tcr_0769 response regulator receiver (CheY-like) and ANTAR domain protein
MGFNALLVSDDVNHSAELKSGLIFAGAHNVTVVGMDESWTELLSADTYDL
LVLECHQVSEGMLNTLADLNENPAIPVICFTSERDSKVIKQSVKSGVMAF
VVGDKNQNRMKPIVDVALARFSEQRALKKELSQLKDKLANRAMIEKAKGL
LMQTRGISEDEAYHEIRRHAMNQGKRLSEVAETFCSTLNGETQREGSLFT
DKPIAEVQQNPIFD
>Tcr_1762 hypothetical protein
MQFKQALMWLKGRRVVVCDPDLERLDRLRNFFEGYGISVVALSTEKEVVA
EIEKHHYSTHRVYLAVLIDQALAKAVAEVWGQVTHDNPTILSTPVVLLRQ
TPDLPELQSLIEKGYFKYQLDQPPSSKALRRLLVRLNRWKKWQKELSSRP
RPSVFLKR
>Tcr_0906 nitrogen metabolism transcriptional regulator, NtrC, Fis Family
MQQDNTENHSPDHPIVWIVDDDASIRWVLNESLEDRPYQVRSFDSAFEAL
RLLPTERPTVVISDVRMPGMDGLEFMEAIHEHDKDIPVIIMTAHADLDTA
VKSFQSRAFEYLPKPFEIDDALMIIDRAVKRQLSGGKRVRKVKQTKQPLN
IIGSAPAMQEVFRILGRVSQLDVTVLITGETGTGKELVARALYELSSRSN
RPFVAINTAAIPRDLLESELFGHEKGAFTGAHTQRVGRFEEANGGTLFLD
EIGDMPVDLQTRLLRVLNDGTFYRVGGKTPIKTDVRIVAATHQNMQELVK
QGRFREDLLYRLNVIRIKVPALRERREDILPIVRYYLTEEAKSYGLEEKR
LSKAVEKYLVELPWPGNVRQIRSLCTWLTIMAPDKTVHMEDLPLELQNGS
EPLAMSAGGASASEDSDDWETPLRSWAKHFLNAGRTELHTEAEKIFEKAL
IEVAMKHSMNHRQKAAQLLGWGRNTLTRKTQALGLDD
>Tcr_1297 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
MLIITFVIIGVYIDDQQEKLQQKAYTNKTQEIQDLIKTLIENKQEKVSLI
TLSLAQDNKLQNALLNENNQLSYDNYLNTLAKESDFKNIWLHIIDKQGRS
FYRSWTQTHGDNILDKRLDLQKMFKDPKPMQTISTGVYDLTFKSSVPIFH
HKKFIGVFETIAKFNSIAFKLKQKNIDPVFLVDKSYHAQLKRPFTQTFLD
DYYVANLNANPERIQDIKQNRLIQYSHQPLHASYYVDQQKQQLITYYNLP
NLNNEPMGHFFLFYPLDKIETDQLSANKFSLYFYAAIGYLFFLIIYFYQL
NKREKTQITEFNQRLTESVHQKTRQLTHQKYFLQNVIDGVSDSVVVYDKN
LSITMKNKAAEQLIGLTSSSKQYSHGVNENNQNHDYLETVIKCLKSAKPE
KTVHHFIDQNQTSRYFEFTVTPLVDGSGQLNSVIQLGHEITNYLDIQEQL
QQQKNDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDL
DRFKEINDSFGHASGDLVLIECGKRLKKAIREIDTVARLGGDEFTILIDE
LKTNNVIINVVKKIIKTLSDPIFVNENIFHITASIGISIFPNDGTDANQL
LQNADAAMYQAKEDGKNTYHFYTKEMTEQAYNRLLMENNLRDALDNQQFE
LYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLG
KQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNKNN
CQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAY
LKKLPITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIET
QEQQNFVLQEGCKLIQGYYYSRPLTKKAMTAKLESLQSNKT