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Gene list

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COG category: Signal transduction mechanisms
Gene type: CDS
Genomic element: chromosome

Number of genes found: 59

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# Streptococcus thermophilus LMG 18311, LMG 18311

>stu1942 unknown protein
MLRFNQFDLRRDFELPIFITFENTNNRIVKNKILKEFGIHGFLIKNHEKT
ILKMNGYPENIIVDESQKYKNREINWFAETWDGLLKFNFNNLKLIKTGSS
SGQIHSSTWEVFDYFISNNFCFNNNIRSAIVQIDDLTKWLLTDLSLDYDD
YNFETKIDSYQDIEFNNHKFSIDIIKGFEEEISSLQKKIEANVLVEFNFE
DNLTKYETKLIIDQFRNLVQILTGMNIGVNKILVNQNSNWILSNLYLPSI
EERSKNFSQTSYSRLRDKFSIILQKWFSNNRIQILSANFLHGIHYNVPLD
TTLIVLVSGIEIYFSNYRENNKEISARKKVEKVIESVDASLSNFKNTQEM
EKFSKLIIDNRVYRVHGTKRKNIIESEYELKEPVKQLEKYIYDFILHNLG
V
>stu0296 polar amino acid ABC uptake transporter substrate binding protein
MKLKKILGITGVAIASVALLAACSSKSPKEASKSSGAKETINFATVGTTA
PFSYEENGELTGYDVEVAKAVFKDSDKYEVKFQKTEWSSVFTGLDSAKYQ
MAGNNISYSEERAQKYLFSYPIGTTPAVLTVPKDSNIKKYDDIAGHSTQV
VQGTTTATQLTEFNDKHSDKPVELNYTNENITQMLTSLNEGKYDFKIFDA
PTVNAIIKNNKLSNLKTIELKSDEQPYIYFLFADNQKDLQKFVNKRLEEL
QKDGTLAKLAEKFLGNKDYIPTKDALKVPSKK
>stu1380 response regulator (homolog to RR08 Spn) uncoupled, truncated
MTHEVHIEDQSLELTVKSFELLWILASNPERAFSKTELYEKVWQEEYVDD
SNTLNVHIHALRQELTKYTNSNTPAIKTVWGLGYKMGRPRD
>stu1492 polar amino acid ABC uptake transporter substrate binding protein
MKKLFLGAMAFLVAVTLVACGSKKDADESIKENKKLVVAVSPDYPPFEFK
TLVDGKDQVVGSDIKLAQAIANELGVKLEVTTMSFDNVLSSLQSGKADLA
ISGISVTDERKKTFDFSDPYYETQNAIIVRKGQESTYSSLDALKGKKVAV
QKGTIEEGLAKKQLKDSIVISLTAMGEAINEVKSGQVDAVDLEKPVAEGY
VAQNSDLTLASVALKVDDGDAKAVAMTKGNDKLKEAVNKVIKKLKADGTY
DEYIKDASKYTAAE
>stu0665 conserved hypothetical protein
MPNRFYKIRKNRLVAGVLAGLADKFGWNLTLARVLAIILMVSTQFGIFLY
LVLALLLPYKEDIYPEIKLKDGRKRKNAEPVEDEWKW
>stu1240 unknown protein
MGGLWVNSNNTGLVYDLNGKKSKLVVGYREEEIKEISIGQKVRQKFETSL
EDVSDSKLKTIADFDKKYQLQTKEVVLVKTERGWLL
>stu1647 conserved hypothetical protein, putative protease
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAF
DTKEVLTVNKKADDSKGSYNFVAVAQTKATLALMLYTQFNDFAKLQTAEE
ATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVA
DDSSFKGVLNIADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDG
KEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLDGVGGPSAGLM
FTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGA
DIFFVPNNLVTKEMKKADPDAKTNYQEAKEAAEKLGTKMKIVPVKTAQEA
IDYLKKTK
>stu0052 conserved hypothetical protein
MQVQAPRRTPKIQQVVEFVESLDDNHRLKGKEDGETYLIEPNAISRIYIE
NRQVLAETTQGDYHLGLRLYQVLEILPAYFIKISQSEIVNLKEIERFNIT
PNRLVEIHLKTRKLATHHAVTSKQ
>stu0152 transcriptional regulator, putative
MRHHTIHPQLEQVFSAPYLRQLQKVTFQKGNYIGTQGQDITELTYILSGR
VKIVRSLSNGKEHILQMPQQPQLLGDVELMTNQLAGSSVIALEEVQAAQL
PLNNKEALLKDPIFLYHIGRNLAMALHRQGITASTNASYFVKERLATHIL
NIEEQDIFQLSPSILSSSFGTSYRHVQRVIKQFIDQGIIEKKAFKTYRIL
QRDSLETLAFID
>stu1948 conserved hypothetical protein
MEELITPSEKRIINRKKGEIYDYISYSNAFVPYQGWKIHISANLIDYQSI
LDNVYHVCSIFQTPFKYINKISELFRILSKHVSQLEIGKFITIYPKNKET
FLLLLEELYDKIPKYTGVQILTDRSYKDSEIIFYRYGVMNARLINNERPK
LKFNGTFYEDITEPYYTCPPFVEDIIFNKVVDDYNIESLFHDRYQMESII
HKSGAGNVYIAIDTINEEKVIIKEARKKVYITEKILAIDLLLNEKCILKK
LKGKVDIPNYIECFTIEGNLYLVEEFIDGQRLDILKPEYNLLIKRNSSEL
GRYNKKVKKIISNLFLSLYKIHQEGIILEDISSSNILLTNDDRVFFIDLE
TAYNKNDGIIVETTNECYPKNISQKNEQRDIVKMWYCIIDLLTNSTSLLK
YDNTGVSTLNLFYKMSLENNLPKSLRKKFINDFSIVDFKNTFIIKFIEMG
LNIEKIVRMQQDLTETILSHNTFEIHGKTILESIDNYKYISNMDLKFSSD
PSFSSLYDNCNKSIDDLIGIAILDNNFELFLNYNLDELLHDMSYYQKYYL
LRLFNDTKICDRVYFIKVLNSIIKNDIKCIDGVKYIKSNEYFSPYLITGN
SGLIIELIKFSKNNNTMKFDEWIRSLSEGISYTYAKGTSLYYGLAGLGLA
NAWLYYYFKETSFLKTSIKICEHIFDFSIKQNTKTILIDPMSEEIDYTYS
KGMLGQLYFINELLNIIKE
>stu0112 conserved hypothetical protein
MKAIITVVGKDKAGIVAGVATKIAELGLNIDDITQTILDEFFTMMAVVSS
EDKKDFTHLRAELEAFGESLNVKINIQSSAIFDAMHNL
>stu1162 polar amino acid ABC uptake transporter substrate binding protein
MIFKKILRYLTAVSLVIATVFLITNHKTEAEDTSKLLDSKAVQKIVNRGT
LNVGVKQDVPNFGYYSAKTNRYEGMEVDLAKKIADELRVKVNYIPVTTQT
REPLMDNGTIDLLIGTYTINDERKASYAISNPYYRDQIGFLVLKDSGINK
ISDLNGKTIGVAQGASTKAALQEYSSAHNLKFNYVQLGSYPELAVSLYAH
RVDAFSVDKSILSGYESKKTKILNEGFKTQDYGIASSKSNQELIDYTNDL
IAKWQKDGSLQKLYDKYNLKPAKAENK
>stu1654 polar amino acid ABC uptake transporter substrate binding protein
MRVSRIIDMKKWLAVMGILGLSVMTLAACGNKGDSKVSGEKQTITVATDS
DTAPFTFKKGDDFKGYDIDLVKAVFKDSDKYEVKFVTTPFDSILTGVDSG
RYQIAANDFNYNEERAQKYSFSDPISRSNYAIISAEGTKYTSLDDLSGKT
TEVLPGTNYAQLLENWNHANADKTPITINYASSSTGLSTRVQHIQEGKID
FILYDAISSEYIVKDQGYKLAVNKLKDDIGMKTDGLEYLLFSKNKQGKEL
KTFVNKRIKELKKDGTLAKLSKEYFGGDYVSDLK
>stu1579 polar amino acid ABC uptake transporter substrate binding protein
MKLTKKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRI
AVFADKKPFGYVDNKGAYQGYDIGLGNRLAKDLGVKPKYVSVDAANRAEF
LISNKVDITLANFTVTDERKKQVDFALPYMKVSIGVVSPKDKVIKDVKEL
EGKTLIVTKGTTAETYFEKNYPNIKLQKYDQYSDAYQALLDGRGDAFSTD
NTEVLAWALENKGYEVGITSLGDPDTIAPAVQKGNKELLDFINKDIKKLG
EENFFHKDYEKTLHPTYGDAAKADDLVVEGGQVK
>stu0437 sensor histidine kinase, uncoupled, truncated
MVVFLDTTSYYNSSQALFNLSILLSLFAFIFFVIIVSALSGIVIRPFIRN
YEKQRRFITNAGHALKTPLAIISANTELQELMTGENEWLKSTNDQVARLT
NLINSLVALSRLEEQPDIVLQDVDFSYITEDAAEDFKGPVVRDGKSFVMD
ITPDIHVKSEEKSLFELVTLLVDNANKYCDPEGTVMVRLRQIGRTCKRAH
LEVLNTYKEGKEVDYGKFLSAFIVLMSLIITKSTVVSA
>stu0792 response regulator (homolog to ciaR Spn), truncated
MILLDLMLPEKDGFTVLKELREQGITTPVLIITAKESLDDKGHGFEVGAD
DYLTKPFYLEELKMRIQALLKRSGKFDQNTFSFGDVCVNLSTNSTYVGDK
EVELLGKEFDLLVYFLQNQNVILPKSQIFDRL
>stu2001 conserved hypothetical protein
MKRFHFETIHLIMIGLILFGIATIFVRVLQTESALIFALFIIMVVVVALL
HYQKTTYESLEIEQLDELNQDVEASLKTLLEKMPVGVVTFDENDHIEWFN
PYAKLVLSDEYGNFNKQLIADFISQKRKGSPSNVITVGDNKYAAFVDFDN
KLTYFIDNVYDQDENVDPNMTRPVIGIISVDNYDDVTGSLPDADVSKINT
FVVGFISEFAKAKHIHYRRIEGDRFYFFTNYSVLTEFMDQKFSVLDDFRQ
QAQERGLPLTLSMGISFGTLKHDQIGQVALQNLNIALVRGGDQAVVKEND
DHKELLYFGGGSVSTVKRSRTRTRAMMTAISYKLKTVEKVFVVGHKNLDM
DALGATVGMAHFASQIVRKSYAVYDDMAMNTDIERAVERLKEDGQSPLIT
LSEAEELVNQHSLLIMVDHSKINLTLSQDFYDRFNEVIVVDHHRRDDDFP
ENAVLTFIESGASSACELVTELLQFQGAPERLSKIQASILMAGIMLDTKN
FSTRVTSRTFDVASYLRSLGSDSGEIQMISATDFDEYRRINELIIAGERI
TDDIIVATGDNHKCYNNVVIAKAADTMLAMAGIEATFVVARTSHSTVNIS
SRSHNAINVQRIMEKLGGGGHFNLAACQLRDCSVSQAQNKLIETIMGELA
PKED
>stu0877 polar amino acid ABC uptake transporter substrate binding protein
MKKIVKTVLLACLVILPLFTLSACSSRSHFATQKDQWQTYTKEKKIKIGF
DATFVPMGYEEKDGSYIGFDIDLANAVFKLYGIDVEWQAIDWDMKETELK
NGTIDLIWNGYSVTDERKQSADFTEPYMVNEQVLVTKKSSGIDSVAGMAG
KTLGAQAGSSGYDAFNASPKILKDVVANQKVVQYSTFTQALIDLNSGRID
GLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFAVGARKVDKTLIKKIN
QGFETLYKNGEFQKISNKWFGEDVATDQVKGKR
>stu0401 fructose PTS system component IIABC, truncated
MLLDLQATTKEAAIDEMINSLVDNGVVTDFDVFKSGIMAREAQTSTGLGD
GIAMPHSKNAAVKEATVLFAKSNKGVDYGSLDGQPTDLFFMIAAPEGAND
IHLAALAELSKYLMQDGFADCLRQVTSADEVIEAFNIGEKEAQAEEDKKA
QAVKEAASSDKPLIVAVTACTTGIAHIYMAEESLIKTGEKMSVNVRVETN
GASGVGTPMTAEEINKAVGVIIAADKAVETACFNGKN
>stu1495 polar amino acid ABC uptake transporter substrate binding protein
MIMKPWKKLLLGLAGIFALTSLAACSSSTNTLDKVKNKGTLTVALNPHFA
PFEFKTIQDGKDTIAGADIEIAKVIGDELGVKVKFSEMSFDNVLASVQSG
KADIAISGISATKERQKIFDFSDTYYDSETVLLVKKDATEKTYKQISDFS
KKSIAVQKGSIQENIAKANLSDANVVSLAQPGEAINELKSGQVEGVVLEK
AIAKGYVDQNSDLTMSDIALKSDSNDAYAVAMPKGSDDLKAKVNKIIAKL
KKEGKIDSYVQDAYALSLKSSSKSGVTI
>stu1175 conserved hypothetical protein
MVVMTNEEKKIAYDLMLAQANVLFANEDNALANFANASALLNTTLPNSVF
TGFYLMDNIKNELILGPFQGNVSCVRIALGKGVCGQSAAENRTLIVQDVT
KHANYIACDSAARSEIVVPMEKGGKLVGVLDLDSHQVEDYNQVDQDYLEA
FVKILLEETDFTFGMFEVN
>stu0975 amino acid ABC uptake transporter substrate binding protein, truncated
MGAELVVYDNVTNDVYMQDLVNGRTDVIVNDYYLQKMSVAAIKDKYPVKI
NDGIYSNPYSTSFTFSSKNKTLQEKVNKAIKDMKEDGALTKISEKFFAGQ
DVTKKTKVDYTEIDISDVE
>stu1509 hypothetical protein
MNNIEMIMASFRQHQGFLTFQQVLEEKLPYKMLLRMIDEGQVEVEGKGLY
RLPDTYLDEWFVTQQRFSKGIFSLETALWLHGLSLTVPFEMTMSFPYGTN
TKNVKSEGIRPIVLRSYYDEGIIELERQVGQKIKVYEPERVLAECLRPVY
QVDVQVIAPAFKMYFQNHKVNYSKLFHYAQLFKVTNKLQSYMEVLT
>stu0795 sensor histidine kinase (homolog to ciaH Spn), truncated
MYLAKWSRRPIQESLEKQKTFVENASHELRTPLAVIQNRLESLFRKPEST
ILDNSENIAYSLDEVRNMRLLTTNLLNLTRRDDGIKPEIETLDSSFFDKV
FTNYATIAEENEKGFTAQNQVGRSIKTDKTLLKQLMTILFDNAIKYTEDD
GQVTLTVRTNDRHLYITVADNGPGIADEDKKKIFDRFYRVDKDRTRQKGG
FGLGLSLAQQIVLALKGTIIVKDNQPKGTIFEVKITGV
>stu1494 polar amino acid ABC uptake transporter substrate binding protein
MKKFWFMLTALVATCFLVACRGSQGVSTKTIKENKKIVLATESEFAPFEF
KSLVNGKDTLVGADIELAKAIGKKLGVKVEFSVMSFDNVLASVQSGKADI
AIAGISVTDERKKVYDFSDSYYTSENVVIVKKDKVNDFTSADSLAKQTVG
TQKGSVQETVAKKQFSKASVVSLASNGEMINELKSGQIQAVVLEKAIAEG
YIAQNDALTLASFNLKSDGSDAYAVAIRKGSDDLLKEINAVIKETKESGK
FDQWLKEASSYKQSK
>stu1393 unknown protein
MCTASFGIAEEAYKFRKNLITKEEFLLNSQILCIEVSVSALSSMLGHAVI
PITILGAVIENNIGTFLYEIAKDNLTMKEKLLIADYFKEIQEYNYFLENE
FELYNHQLQRD
>stu1939 protein-tyrosine phosphatase
MNKVVFVCLGNICRSPMAEFIMKALDQDGSLHIESRATSSWEHGNPVHQG
TQKILRKYAVSFDSSKGSQQISQSDFEFFDLIVGMDESNVEDLLQVSAGR
YDDKIKLFRPGGVPDPWYTGDFEETYNLVTAACQDWLQWIRDRQ
>stu0793 sensor histidine kinase (homolog to ciaH Spn), truncated
MLTKFFNYLFRRIKSDGFKSFIHFFATFSGIFLIMTVMILQILSYGVYSN
VDSSLKAAVTKTNSYLEMEMLKCEFFLTSDVDQNNTATIYQEYDSKAYR
>stu1381 response regulator (homolog to RR08 Spn) uncoupled, truncated
MKKTILLVDNEIDVQNRYFLQAGYDVLVAHDGKEGLELFRKKSIDLIITD
IMMPNMNGYDFISEVQYIAPNQPFLFTTAKTSEQDKIYGLSLGGYDFIAK
PFSLRELVLRVNNILRHLSR
>stu0974 amino acid ABC uptake transporter substrate binding protein, truncated
MDAVFLVACSSQSSADKNWEKIEKRGSIKVATAGTLYPQTYHDDDNNLTG
YDVEILKEVGKRLKLKIDFTEMGVDGMLTSVNSGQVDIANYSLEDENNNV
KKFLRSEPYKYSFTSMAVRESDNPGISSWEDLKGKKAAGATSTK
>stu0159 polar amino acid ABC uptake transporter substrate binding protein/membrane-spanning protein
MKKIIIACFAALLLVFGGLSSAQADEYLRVGMEAAYAPFNWTQDDNSNGA
VPIEGTKQYANGYDVQIAKKIAEAQGKKPLVVKTAWTGLIPALTSGKIDM
IIAGMSPTAERRQEIDFSDRYYRSEPVMVVSSDGDYAKAKSVKDFKDAKI
TGQQGVYLYNLIDQIPNVNKQTAMGDFGAMRQALASGIIDGYVSERPEAR
TAEKASSKYKMISLKDGGFQVSDDDVSLAVGLRKGDSQQMEQVNKVLAGI
SQEKRVKLMDHIIDIQPADKTDEAKKGNFFSQVTTIIAKNWPQFLRGTAI
TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFLNVYIEV
FRGTPMIVQSMVIYYGTAQAFGINIDRTLAAIFIVSINTGAYMSEIVRGG
IFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDT
SVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTVTRILRYV
ERRLDQDTYTQGGGVH
>stu1637 conserved hypothetical protein
MSQQYEHIMVAIDGSHESELAFLKGVHVAKRNNAQLLLVHVIDTRALQSI
MTFDSYIYEKLEDEAKAVLANYERQAREAGLTKIRKVIEFGNPKSLLAVD
IPDKENVDLIMIGATGLNTFERLLVGSSSEYILRHAKVDLLVVRDSEKTL
>stu0183 conserved hypothetical protein, putative protein kinase
MQFSFDSDFKKIEKCKTLKDDYYKYVEFGSEIPRQGWKIHISSNLDSYQI
VLRLIVEYCTKYKIDFKYIYNNKVLKYFLSSDCFTTQAGKCITIYPKNDK
LFKNIVLDLADILIGFEGPVVISDMQYRDTNIFYRYGVMAAQSDYLLIGG
TPIMDNRSFFELPNGIEDPFENINDEYHNVATFLGCTVEPTMIIHESASG
NVYESKYDGNVTILKEGRKNILGTNSTAIGDIKNEEKIIKQLETLEGIPK
YRLSFYEWGNYYLVESKLKGDMLSLIASSFLFESIPFSDLVMKLLILFDS
VHQKGIIINDVSSNNIFVDFTDDVYVSLCDFGSSYNIVDSNSEEVLSIKS
KGAGMTMTFYDHSHIELGDKERDFHKLGYTLMNYVFPINQYLRHGVSGNE
VLKMFRQFCVMTYPSDSIFKVIELLIRQPLNWRKDLETCLRQSKISTVFR
KRINDRTNRYFTAEFMTKSENYGDSCSLIYKKRYYFLVPEFSEWLEKNYG
ESVFSNSFKIFDKNYEELNIEISEYGLTQQLGNILFWVKNCNEFSFHSGI
VGLGLEVLYELKFNHLDILYKEILDLIYFRIKYSISNDNIVENNGIYDGK
LGIVLFLVEYYKLTKDDIILLEAKRLFTEASHAIVQKENYIEFVNSFSDS
ISTPYVNDGLSGYVLLSLQLWELTGDENYFKKEYIRFLTNISFCKRRDLF
SGQLGISYVLYKVSQSNFSTIQELNLTNKAMRQLSNSSIFEFREKNRLHI
YDYYPNNEERDVTHEYQFMFNLFLTHQEV
>stu0291 ABC transporter substrate binding protein
MKLKKILGITGVAIASVALLAACSSKSPKEASKSSGAKETINFATVGITA
PFSYEENGELTGYDVEVAKAVFKNSDKYEVKFKKTEWSSVFTGLDSAKYQ
MAGNNISYSEERAQKYLFSYPIATTPAVLTVPKDSNIKKYDDIAGHSTQV
VQGTSTVTQLTEFNDKHSDKPVELNYTNENIEQMLTNLNEGKYDFKIFEA
QTVNAIIKNNKLSNLKTIELKSDEQPYIYFLFADNQKDLQKFVNKRLEEL
QKDGTLAKLAEKFFGNKDYIPTKDALKVPSKK
>stu1676 blpT, immunity/modification protein
MMKKRTLTLWMMSSALLLNLSVGTALADEVVETGADNSPKVEATESTPVE
QPSDSQEQSLPEDKEAPAATESVTLAESEEETAKNDIPAVSREEYDANVA
DLPKISLDDVRNAFTEDGQAHTIYFGRGTCYYCRQFSPELKVLNQLMDGR
LEYYDIDREDFDRNYVFGEIGIPGTPTLLYLENGQLLSGWVGGGPAQTVY
DHLASSSPRFMTLNQEQTTISEPQTKTVRPTRVTEESTKEKSLPTVQPQP
MSTVQKELNAQTGQMAPMTDKVADTKEFPKTNDGEQSLVSFVGALAILAS
LMLALRYYIK
>stu1501 gnlP, glutamine ABC uptake transporter membrane-spanning protein
MKKKLLTLFLSVMSALFVFGAKASASTISVVSDTAYAPFEFKDSDQTYKG
IDVDIINEVAKRKNWDVNQTYPGFDAAVNAVQSGQADALMAGTTVTDARK
KVFTFSDTYYDTSIVIYTRSNDKVSDYKQLKGKTVGVKNGTAAQTWLDKN
ASKYGFTVKTFDTSDLMNNSLDSGSVYAAMDDTPVVQYAIGQGKDYAINI
KPESIGSFAFAVKKGGKHESLIKDFNEALKEMKEDGTYDEIMTKWLGDSA
KASSKSSSSKPSEALNLTGDANAKATPTKETYTISMDSSFAPFEYQNGSG
KYVGIDVDIINAIAKNQGFNVKLTNPGFDASLNAVQSSQADAVLAGMTIT
DARKQIFDFSDPYYTSNIRLAVKKGSNIKKYEDLKGKTVGAKNGTSSYSW
LEENADKYGFTLRAYDEASTMYDSLNSGSIDSLMDDEAVLLYAIQQGRNF
ETPIKGISTGKVGFAVKKGANPELIEMFNNGLAAIVKDGTYDKIINKYLD
NNKSKEKSSTNVPDETTIVGLIKNNYKQLLQGLGITLGLTLLSFAIAMII
GIIFGMMAVAPNKTLRVISQIFVDVVRGIPLMIVAAFIYWGIPNLIENIT
GHQSPINNFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSLGVPY
NTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIII
ARNYQSFRMYAILAIIYLVIITCLTKLAKRLEKRLK
>stu0318 hk01, sensor histidine kinase (homolog to csrS/covS Spy)
MSKLFGKVTIRKKLTMTTAVVFFLVLSMFTLVVVFSANTLLLQRERQNVN
NTISKVVTYIEKDWDSDEELSPEPLLAALYSPKNIYPSIINGVLSEKRSL
DGQVAVSNRLYSNQSVYVYDKKGTFIFTSEEDTDSPPGMSEVNKLKLVSY
KGKRGFLLQVPIYGKDKKTIVGYAQVFHDLEFYYALKERLIFLLIFLEVG
MTVLVIAVTVVVLTSILRPMRQLHETMGIIIDSPSDLELRSKIESHDEIG
ALALNFNCMMDKIQENNQMQMRFLSDVSHELRTPIAVIKGHMDLLQRWGK
NDPEILEESLEAASHEANRMTIMINDMLDSIRVKGSFDNHRNDTCDLNSS
IRTVIGNFRVLHDDYQFYLNDSEGSDRPAQIYSQHFEQVITILIDNAVKY
SPVNKKIQITIKALEDEMLVQVQDNGEGISKEDIEHIFERFYRSDKARNR
TTTQSGVGIGLSILYQIVEAYRCHIDVSSELGVGTRFDLYIPFAESETTT
PQIEG
>stu0542 hk02, sensor histidine kinase
MLVGLRIISILYDLFLASMLFYRPLSKINMKKKPLVALFFILIFHGELVF
LFSESRIFLVSNLLLNILEYYLIGLNFDYPIRQSSFWILLQTSLSLLAGA
VLNQGIQLILPLGELSKNLEAISLYLGISFFLSTGITLILRKLLLSHQRL
RIATSKGNWFYQFIVPLLSIFFAFTISAIQGGVFGADYLSIISLSSLIVL
TLSSLYFNLYLARQQQQYYQNQLEKEQLQFQVQEIQQSQEEYQRLQSLRH
DLKNKHLTLLSLLEKNPEEAKDYLYSLTDSIVGEQTFYSKNQTINFLLNQ
KLHHLKDEIEMEIDCFVPQELSIQPDILAVILGNCLDNSITACLRLPNKE
RNLSLNIRYFQQNLFINIRNNFDEKEKSTRKSRQKDGWGLRNIDALVQEY
QGNIKHFIKDGQYQIEILLPIKIGTIPTKEF
>stu0902 hk04, sensor histidine kinase (homolog to spaK Bsu)
MGDWLQVALIKKREHSLRTILLSYVVSLTVLSVISSLLILYLFSLSFRFG
VLIPANQVESDLSAVRSDIETSKVFNPEILPDGTSYVFLTRDFKLKKSNM
PVNLQEESLLNYQFKNAHGEKYGYFQSFERSDGIVIVNYQLSPRYRNEWM
NQHFPNADLMMIGSMFVSILIIFIILTFYYANKLSQQLKPILRVTEKISQ
QDLDFQTSQSTIKEFNQVLSGLDHMRIALRESLMENWKAEQDKQNQISAL
THDLKTPLTVARGNAELLAMTSLDENQTDLLEHFQKGIAQVDTYVKELSE
LNKMSLKKTLTLEEVPAKEFVEDIYDQTLSLAQTKQINVVFDKKEIAKES
IGNWDKSLLNRAIMNIVSNAVVHTPSGSQLLLTARIEEDEFKFICLDSGP
GFSLESLENATQLFYQEDKSRQSRNHSGLGLTIANDIIRLHYGSLSLAND
NGTGGAKVTIILPLLNTDDS
>stu1159 hk05, sensor histidine kinase (homolog to HK02/MicB Spn & HK02 Sth & VicK Spy)
MTSIGLNITSFELALLFMLLFVAFYFIFLAYRDYQQVKNIRKLTKRVKSL
MAGNYNEKLCIKGDSELLELANSLNDLSDVFRLTHENLIQEKNRLSSVLS
YMSDGVIATNRLGQITMINSTAQRLLNLDRETATQMSILDILDGENPYTY
SELLSKTPEIHLSRRDANDEFVTLRVNFALIRKESGFISGLVAVLHDATE
QEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALNEEIAPNFIKVS
LDETNRMMRMITDLLALSRIDNKSTQLNVEMTNFTAFMTYILNRFGQIKS
QETNPGKSYEIIRDYPVNSIWVEIDTDKMTQVIDNILNNAIKYSPDGGKI
TVSMKTTDTQLIVSISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTGL
GLSIAKEIVKQHNGFIWAKSEYGKGSTFTIVLPYDQDAMMVDEWEM
>stu1326 hk06, sensor histidine kinase (homolog to HK11 Spn)
MTMFRTYQKNDFAYFVSLIFLVFPILGVFGGYYPVWTLVLTGLFTIAYLL
IVYLKKAYSKWIPFLWFYTLAYIIFMSISFQGGMMWFVFFNVNLLVWRFE
DSISSYRFLSFLATLLILTSSSFLLTDDLSTHLMSLAITLFSLGMYYFQN
RMRQERKMEEALAEKNRTINILSAENERNRIGRDLHDTLGHTFAMMSLKT
ELALKQMDKEQYDAARKNLEELNQISRDSMYEVREIINQLKYRTVAEELL
ELERLFDLSDIILTVDSSLDLDSLSPVIQSTLSMVLRELANNVIKHSQAE
RCQIRLNRNHGIVLEFEDDGCGFEEVTGQELHSIRERLSLVDGDLEILSQ
SHPTIIRVHLKEGGKA
>stu1335 hk07, sensor histidine kinase (homolog to HK01Spn & Sth)
MMDKRQFIKYQIRSRLPFYLLLIFNGIILVLFAFLFEEAADILHYALTIL
TFVAIIIAIWDLVSSYQSYNLAYLYEKMTPSSPLEFYLAQALENAKESQM
VQTEEERKRYTDLMDYYTLWVHQIKTPIAASQLLLGDVTDSKTRALLEQE
VFKIDAYTNLVLQYLRLENFHDDLQLRQVALDPLVKEVVKKHSIFFIQKG
LTINLHDLDVEVVTDEKWLLVIVEQVLSNSLKYTKSGGIDIYFKDNRLYL
KDSGIGIKDSDILRVFERGFSGYNGRLTQQSSGLGLYLSKKIADQLGHDI
SISSQVGQGTTVSIHFQKQKLAID
>stu1421 hk08, sensor histidine kinase (homolog to HK03 Spn)
MKKQYLFLILTYSVVVLIGVTLVVMDSFNLNFSLVFGSISQVFHFLFNMF
FVVLSLLILLYILWAIANDNSMRSVNQDLRRIINNQPVKRQGDSELDKNM
MRLSHKMRKLTKDLQKTENAQALKSRDIIKKERGRIARDLHDTVSQELFA
ASMILSGVSQMVDQLSKEDLHHQIQAVEALLTDAQNDMRVLLLHLRPTEL
ENKTLQEGLQMILKELTDKSNIRVVYKDMVKKVPKRIEDNLFRIAQEFIS
NTLKHAKASQIEVYLYQNSQEIQLKMLDNGVGFDLNASTDEMSYGLKNIQ
ERVDEMAGTVQFLSAKGKGTSIDVRVPILRGEDNVE
>stu1687 hk09, sensor histidine kinase (homolog to BlpH Spn)
MLTTLWLLFLTLLSAGLEIILFLYLMGQKIRLRYFFLLLIFNLAFNFIYN
HSSWFIIKFWGEDIYYLLLSFLLSTKTKKPLKIKIFNGLFPDILNNLSLR
LITFFIFPFFNISITDYKSSLLISIPSSIAPLCLSFLFIKLFKESFTILQ
KQKSNSPIQHIIIVANFFMFGYTLLLQSLMYLENTTHSSTLELRKLCVVI
SLVLFFIMIVFLERNIREMIQGQLDFQKNLQLENLYTYNKHIECLYNSVR
SFRHDYSNLLVTLRLGIDKDDMDIVKEVYDSVLQESDKRLNTRNFDLARL
VNIQDNTLKSLLSAKVLQAEEEGIEAQISIPEPIHLIGMEILDFIIVTSI
FLDNAIEGAIQTQNHKITISFWEDHRSQLLSISNTISEEQTETKTIFERG
VSNKGRERGIGLANVTEILDNYINVNLETQSNNFSFTQQLTITKKA
>stu0394 luxS, autoinducer-2 production protein
MPKDVTVESFELDHTIVKAPYVRLISEEVGPKGDIITNFDIRLIQPNENS
IDTGGLHTIEHLLAKLIRQRIDGLIDCSPFGCRTGFHMIMWGKQDPTEIA
KVIKSSLEAIANEITWEDVPGTTIESCGNYKDHSLHSAKEWAKLILEQGI
SDQAFERHTV
>stu0162 mecA, negative regulator of genetic competence, putative
MEMKQINETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDL
PDNFKNSGMLSFRVTPRKDRVDVFVTKSDLKEALDFNDLSDMEDYSGLSP
EEFLKALEDNFMDKGDIEAHHKLEEHDKTLKEVDETMTEPAKEVAEETIR
EDYTHYVLAFSDFDQVVTFAQGLKNVSVEGSEFYKLGDVYYMTILLYLAD
EPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDALPVLQATKWS
>stu0447 phoH, phosphate starvation-induced protein
MQEYSVEITLNHPDDVLSLFGTNERHLKLIEENLNVIIHARTERVQILGD
DEESVELARLTIQALLVLVERGMLVNTSDVVAALTMAQDGSIDKFVALYE
EEIIKDNSGKPIRVKTLGQKVYVDSIKSHDVVFGIGPAGTGKTFLAVTLA
VTALKRGQVKRIVLTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQI
LGKEQTTRLMEREIIEIAPLAYMRGRTLEDAFVILDEAQNTTIMQMKMFL
TRLGFNSKMIVNGDMSQIDLPRRVKSGLVDAMEKLKGIKAIDFVHFSASD
VVRHPVVADIINAYEKDAPKFNLEEKSEGSDQAEEVASGLTEYPVISAED
VKK
>stu1426 pppL, phosphoprotein phosphatase
MVFLSLSCVRKSRVTEEETLTQVRKKIMEISLLTDIGQKRSNNQDFVNKF
VNKAGVTLVIVADGMGGHRAGNIASEMSVSDLGRDWINTDHRELSHIRDW
MIAAIDEENRKIYELGQNEEYKGMGTTIEVLALVDNAVIFAHVGDSRIAL
IRNGEYKQLTSDHSLVNALIKAGQLTEEEAAVHPQRNIITQSIGQAAPVE
ADLGVQQLEPGDYILANSDGLTNMISIEQIIHIVNSPGLVEEKTSRLVAA
ANEAGGHDNITVALIEVESEEG
>stu0666 ptsK, Hpr kinase/phosphatase
MTVTVKMLVDKLKLKVVYGNEELLAKAITTADISRPGLEMVGYFDYYSPE
RLQLVGMKEWTYLKTMTANNRYSVFANIFREETPAVIVARGLEIPEEMLQ
AAKENGVAVLQGRNSTSSLSGDMSWYLNSQLAERTSVHGVLVDIYGMGVL
IQGDSGIGKSETALELVKRGHRLVADDRVDVYAKDEGTLWGEPAEILLHL
LEIRGVGIIDVMSLYGASAVRDSSQVQLCICLEHFENDEVFDRLGNSNEE
IELQGVKIPRIRIPVKTGRNVSVVIEAAAMNYRAKQMGYDATKTFKDRLT
DLISKNGED
>stu0145 relA, (p)ppGpp synthetase
MAKDKNVTGEEILDVCSSYMSADDLKLVEKAWHYATDAHSEQFRQSGEPY
IIHPIQVAGILAELHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRN
IVDGVTKLGKVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMR
TLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDTAFRYLNEVEF
YKISHMMKEKRREREALVDEIVYKIKTYTAEQGLVGDVYGRPKHIYSIFR
KMRDKKKRFDQIYDLIAIRCVMETHSDVYAMLGYIHELWRPMPGRFKDYI
ANPKSNGYQSIHTTVYGPKGPIEIQIRTKKMHQVAEYGVAAHWAYKKGIK
GKVDSKESALGMNWIKDLVELQDASNGDAKEFVDSVKEDIFSERIYVFTP
KGDVQELPKDSGPIDFAYAIHTQVGEKATGAKVNGRMVPLTAKLKTGDVV
EIITNAHSFGPSRDWIKMVKTTKARNKIRQFFKNQDKEASITKGRELLIA
YFQEHGYIANKYLDKKHIEEILPRMSVRSEEALYAAVGFGEISAAAVFNR
LTEKERREEERAKAKAEAEELMNGGEVKTEKKDVLKVKSENGVIIQGASG
LLMRIAKCCNPVPGDEIEGYITKGRGIAIHRSDCNNIKNQEGYEQRLIEV
EWDERNTNKSYLAEIDIYGLNRSGLLNDVLQILSNTTKSIASVNAQPTKD
MKFANIHVSFEIANLIELTGLVDKIKIIPDVYSVKRTNG
>stu0317 rr01, response regulator (homolog to csrR/covR Spy)
MSKRILIVEDERNLARFVSLELQHEGYDVVTADNGREGLEMALEKDFDLI
LLDLMLPEMDGFEVTRRLQQEKDTYIMMMTARDSIMDIVAGLDRGADDYI
IKPFAIEELLARIRATFRRQDIEATKKAPAKASTYRDLKLDVQNRAVVRG
DEVIPLTKREFDLLNTLLSNMNQVMTREELLLQVWKYDDVIETNVVDVYI
RYLRGKIDIPGKESYIQTVRGMGYVIRER
>stu0543 rr02, response regulator
MRRFSMLKVAICDDSDRDASQLEHYLLSYDKFPLETKLYTNPQKLLNQRT
PDIHCVFLDINMPGINGIDVAQKIRKFNPFIPIIFVTSYRDYMEQVFEVQ
TFDYIVKPIEPQKLMKVLDRILRFLDMGQALFTFSFGKHNYSVPSSDIVF
FEKDKRSVFIYTKTGTYKSLLKTKEILEKLPNYFIQIHASYILNPKYIKD
FDSKTVTILLNGTEEHLLPISRKFQFSFKEKYYSYLSERHF
>stu0901 rr04, response regulator (homolog to spaR Bsu & DvnR Cdi)
MARILVIDDQKDIVQLVVKALELQNHNVTGLTSVLDLDKNSLPRFDLILL
DIMMPDVDGLQFCHEIRNQVDCPILFITAKTQEADIVQGLSYGADDYICK
PFGIKELQARVAAHLRREHRERHHKLSLGEFQFDLSAQELYIENQLLDLT
KSEYGICQFLAENKGQVFSKEQIYTHLYGYEDKGSPAAVAEHIKNIRAKL
KEVGQNPIETVWGIGYKWH
>stu1160 rr05, response regulator (homolog to RR02/MicA Spn & RR02 Sth &VicR Spy)
MKKILVVDDERPISDIIKFNLTKEGYEVVTAFDGREALEQFEAKKPDLVI
LDLMLPELDGLEVAKEIRKTSHTPIIMLSAKDSEFDKVIGLEIGADDYVT
KPFSNRELLARIKAHLRRTETIETAVEESSNSGKQEISIGELIIVPDAFV
AKKRGNEVELTHREFELLFHLATHMGQVMTREHLLETVWGYDYFGDVRTV
DVTIRRLREKIEDTPSRPEYILTRRGVGYYMKNYD
>stu1325 rr06, response regulator (homolog to RR11 Spn)
MKLLVAEDQSMLRDALCQLLMLEDDVEEVHAASDGQEAITLLEKEKVDVA
ILDIEMPVKTGPDVLEWIRANQRETKVVIVTTFKRKGYFKRALAAQVDAY
VLKERSISDLMATIHTVLAGQKEYSPELVEGVAFDNNPLSQREQEVLAMV
AQGSTNQEIAESLFLSNGTVRNYMTAILTKLDAGNRTDAVRIAKEKDWLG
>stu1336 rr07, response regulator (homolog to RR01Spn & Sth)
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVL
MDIGLPLFNGYHWCQEIRKVSKVPIMFLSSRDQAMDIVMAINMGGDDFVT
KPFDQNVLLAKIQGLLRRSYEFGKDQNLLEYMGVILNLKAMDLVYQGEVV
SLTKNEFQILQVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLR
KKLEAVGLKDFIETKKGVGYGLRHDG
>stu1420 rr08, response regulator (homolog to RR03 Spn)
MSNKINVILVDDHEMVRLGLKSFLNLQGDVELVGEAENGREGVDLALELR
PDVVVMDLVMPELDGVQATLELLKEWPEAKILVLTSYLDNEKIYPVIEAG
AKGYMLKTSSAAEILNSIRKVYRGEEAIETEVDNKIKYHDSHPNLHDDLT
ARERDILALLAKGYDNQTIANELFISLKTVKTHVSNILGKLNVDDRTQAV
VYAFRHHLVSQDDE
>stu1686 rr09, response regulator (homolog to BlpR Spn)
MKIYLLEDNSIQMGRLEEAVAHELKSFGKDLSCVQSFDKPDQLLSAITSN
TSDQIFFLDIEIKGEDKKGLDIAKIVRQNNPYAIIAFVTTHIEFMPQAFG
VTAYKYINKTLDEASFRKEIGETIAQVFPINATTTDEFFLYKTESQLINL
PMDQILYLSTSDIKHHVHLQTIHTLMDIRANLADFKKIHKKLYPCHRSYI
VNTDMIISVNKTNYEATLINGQVLPVSRMKIGKIAQIVEERGR
>stu0729 typA, GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A)
MTKLREDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERMELDERAMDSND
LEKERGITILAKNTAVAYNGTRINIMDTPGHADFGGEVERIMKMVDGVVL
VVDAYEGTMPQTRFVLKKALEQNLTPIVVVNKIDKPSARPEEVVDEVLEL
FIELGADDDQLEFPVVYASAINGTSSLSDNPADQEHTMAPIFDTIIDHIP
APVDNSDEPLQFQVSLLDYNDFVGRIGIGRIFRGTVKVGDQVTLSKLDGT
TKNFRVTKLFGFFGLERREIEEAKAGDLIAISGMEDIFVGETITPTDAVE
PLPVLHIDEPTLQMTFLANNSPFAGREGKHVTSRKVEERLLAELQTDVSL
RVEPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGV
KCEPFERVQIDTPEEYQGSIIQALSERKGDMLDMQMVGNGQTRLIFLVPA
RGLIGFSTEFLSMTRGYGIMNHTFDQYLPVVPGEIGGRHRGALVSIDTGK
ATTYSIMRIEERGTIFVNPGTEVYEGMIVGENARENDLGVNITTAKQMTN
VRSATKDQTAVIKTPRILTLEESLEFLDDDEYMEVTPKSIRLRKQILNKA
ERDKANKRKKKSSES