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Gene list

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COG category: General function prediction only
Gene type: CDS
Genomic element: pNF1

Number of genes found: 22

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# Nocardia farcinica IFM 10152, IFM 10152

>pnf11120 putative methyltransferase
MTYDPHGLFTGAAPFYARHRPGYPAALFTTVSERFDLDGTQQVLDLGCGT
GQIALRLAPLVAHVHAVDPDTQMLHEGAKLATAAGIDNISWREGDSYHLD
ALDLPALDLVTMGASFHWTDRASLLADLDHRLTAAGAVVLASGGPPATAT
APPWNDIVTEVRTAHLGAARRAGTSTYTHPRLTHTEVLATSAFSDIDVTT
WHWDLDRDIDSVIGLQFSFSYSAPGQFSDESARAAFADDLRAALVEKFGA
DAVLTEHLTTELIIATRPNGGS
>pnf11360 hypothetical protein
MSGKQQVEHDSSDTARKLRAVTDELSDLFYERSEVVRAVVAAILAGKHSL
ILGPPGTAKSELARELTGRIVDAQLWEILLSKFTDPKKMFGPVDVAALTQ
GRYTQLFEGRATTCHIAFMDEIFKCSVGALNETLAFLNERLYHPESGGAP
ISCPLISAITASNELPSGEESAAIYDRLLVRLEVGYLADPSNFAALIRSA
VQSPAAATAPTTVTLAALQQAVTIDVPAVAVPDGVVDTVCQLRTSLRRQS
LVASDRRWKQAIRLLQASAFLDGRAEVDDNDLPMLAHVLWDSVAERPTVE
REVLALVNPDAREAMDLSDAIAEMAAQLDAKAGQSRETLSQWAIKEANHK
LGKAGKRLEELRHNARSAGRSTATVDAALARHKAVYARVMTEALGVDVST
LTGSN
>pnf11590 hypothetical protein
MNPFLELGGPMASKDAARIAAEPYTPAFLAVYDLWVIKLSDRFAWQCPAE
VMLDQYNRFIGRKHLEVGPGSGWYLANAELPPESAVTLMDLNPEPLAHTR
RRLEGRTCEVRTVAASVLDPVPESAGVGFDSIGINFVLHCLPGDFGEKGV
AFAHLAQVLADDGVLFGSTILNRKPSTLFGRVLTAIYTQVGAFNNAADDR
GGLEKALRSAFTEVSLSEVGDVTLFTARKPRR
>pnf11100 hypothetical protein
MRTMYTVPDLRQLHLEVSTRCNAECPMCARNLFGATAPGLTETSMTLDQF
RACLPEHVLAQLEIVDICGAYGDPAIAPELLDICHHIHTINPSTTIRIYS
NGGLRTPTWWARLAEIPGITTIFAIDGLATNSVYRRKVDIDKVLANAAAF
IDAGGRAQWDYIAFAHNEHEIDSARARAAELGFAEFSVKKTARFLRPLYE
PAPELRPGDGIDAAPIYDRTGAVVGELRPPADERLVNEVVLWARSIEARA
EYFDAFFDTCTIQCQALDSSAIFVSATGHVYPCCWLYVQATLPQLYRGQA
ATDAQVHDLLTASGGANTLDAAEHPLDEILASEFFTAVERSWSTDTIAGG
KLKVCSRVCGEGFSAYRRQFDRPDLVP
>pnf11350 hypothetical protein
MDSMSGKTLRKFADLARKAGRWVGLGSTAPERHATVVEGDRFDAMTWTEV
REQATALAEVEEELSRRFDYVPDLLRDVFLTVYKAEPTLREQAEMEPTRL
PNHAIVTALIGTPEYADLHRETVGDEYAAAMAVIAQRSTLAQMLEQSQDA
QQTAEQSAAAEQEAAEHATAVESALDAAAEQVDEDGAVPGQAAAAVDNAV
AAAQAADDAAQQARAQAEAAAGALGATLRADARQAMASAAEQAREEAALM
AAWGLGPGQLQRMSFDERARLAERLRGGRLGKFTDLVGRFRRLATAERTR
KLEHVAGELVGITLGDDLTRLIPSETANLAHPALRAVFAARFAEKQLMLY
ETMGEDHSGRGAIIACLDCSYSMCAPHTGPDGRIASAEAWAKACGLALLD
QARAEGRDFVGILFSSAEQVSVHRFPAGEAPLDRVLDFAESFFSGGTDFQ
TPLGIAVDILAEHHGDQAVQGGDIVLITDGDAEVTEEWMRTWKSAKSELD
FRLFGVAITDPRRPAGRSAVLEALCDNLRTLDDLADPHPAADLFRVI
>pnf1250 putative transporter
MTVVAKFRSFDMAARLLMINQFGINLGFYMLMPYLAGYLAGPLGLAAWAV
GLVLGVRNFSQQGMFLIGGTLADRLGYKPLIVAGCLLRTGGFALLVFATS
LPGLLIASAATGFAGALFNPAVRAYLAADTGDRRVEAFAVFNIFYQAGIL
AGPLVGLALMALDFRVTAAAAAVVFAILTAAQLFALPTRRAETPAEHTSV
LDDWRTVVANRRFVGFAVAMTGSYVLSFQVYLALPLQAEFVAGAQAQALV
SALFVISGVVAVAGQLRITAWFRNRWGTGRSLVVGLGILAASFVPLVVVP
DPDRFGVPPAAAALLVSAVLLAVGTAAVFPFEMDTVVSLSGGKLVATHYG
FYNTVVGVGILTGNLATGAVVGAARAAGMDWAVWAGLSMIGVLAAFALHR
LDRPQPVAEKGRSTRTRGRHRIPDQHTVGTAPAEQQFEYTGRGHWPTKIP
AARR
>pnf1590 putative transporter
MIATVGSWRELNRPSQLLMINQFAINLGFYMLMPYLAGYLSGALGLAAWT
VGLVLGVRNFSQQGMFLIGGTLADRLGFKPLIVAGCLLRTAGFGLLAVVD
TLPALVIASAATGFAGALFNPAVRGYLAADAGKQRVETFAMFNLFYQAGI
LAGPLVGLGLMTLDFQVTAACAAAVFAILTVGQLAALPSHPVCAGGEKTS
VGQDWRTVVTNRTFVGFSIAMIGAYVLSFQVYLAMPLHAAILSGQHPGTG
LVTAVFVVFGTVSVLGQMRITRWLSVRYGRRGGLAIGVGTLGVAFTPMLL
FPGPGGSAAVAALLISAALLAIGSAAVFPFEMDTIVAVSGNRLVATHYGF
YNTVVGTGVLVGNLGTATLLDLARRSGSGALAWSVLVAIGVVAAIGVYIL
GRIVPPETSQPAEVAVSRS
>pnf1620 putative iron sulphur protein
MNTDSVTTTPITRRTALAGACTLCAVAVTGCATGQASQSDGQPVRVARAG
IDIGGAAVFPEHRILVTQPSDGVYKAFSAVCTHQGCAVTDVDGDVVKCPC
HGSKFRLTDGSVAKGPAQRPLPERAVMVDGNTLIVS
>pnf1550 putative esterase
MIMQWSLVTGPLPWLLSGVGALCAAWLIGARRRLSAQAVAECAGLGFGAA
IVIWVVVERWWRPFPDALPRSVYTWVGIAVAALALLAVRISVTPRWIRRI
AAVTAAVCVITACAVQINLEFGAYPTLEDLLGTGSDNRISLTAVPAAQPN
PVTGWPIESVWSPPPPTQVDGRVVRAVIPGTRSGFRARPAEIYLPPAYFT
DPRPLLPVLVLLPGQPGSPVDWLNGGRVDQTMDAFAAAHGGLAPVTVIAD
ATGGAWRNPLCLDSRLGKVASYLAIDVPAWVNGRLQVDPDPRRWAIGGMS
YGGTCALQIATNYPDRYPSFLDLSGDAEPSLGDRRQTVQAAFGGDTAAFE
RVNPPTLLRTRRYPNSAGALVTGTEDDTTLSAQRSIAAAARAAGMTITTR
ELPGGHNWSVWSAGLRIEMDWLAQRLGLTR
>pnf1510 putative copper resistance protein
MMLTALGLTLTAGSARAHSQLDSSVPAADAVVDTPLTLITLTFNQQIGTA
FANVGLTDAAGTSWAAQVSKVEGKTVRVAVSPTMPAQKYTVAYRVVSDDG
HPITGSYEFTYASGSATTTAPSGAPSPSSVTAAGESSATALSSSLPWPLI
VAVIVLIGGAVVTLRAATRTKR
>pnf1220 hypothetical protein
MAVRFKLGYYSPLTDDPLNRDYVGYFPRMTEEEAWTAGRGVWKANKERLS
REKFALIIGDSRVCAVAEIRGVSVYEDRVAVDGEALGEGHPVRDAWIGKP
DPVVNASQNPVGYCDLPEEAEFRERPCGCGCGEISTRDFLPGHDVRAFQD
RVRRMFAGSALEFFRWVDRIGAEHGLPLLANPTGGTALPDEHREPPNPDP
GEQSPHDPGISYAALSDSGDLLSGNESRAESGEPV
>pnf11160 putative hydrolase
MPQREIRAICFDIGGVLVQMPRGVLAAELAEVLDADVEHVRDMLIEHAKT
RRTPPGELAAILATACGRPHTADAVADRLRLRVADMADPPLYPDAIPTLE
QLAGLGFRICLLSNAIGPDPDTQPARPPYFAHAEVVLHSWQIGACKPQPA
AFRAIEAAMDLAPQQLLNVGDSARFDIDGALAAGWSAIHLVRNSATPAHP
DVARIGALTDLAPLLKGPVRDQYSR
>pnf1290 putative membrane protein
MALLVSRGAAVWSLIGVLALLNVTVAFGAMFASITGVTTGVASVLSNSAS
LLVVLPAWWLFGERPRLLGITGVAVGFGGLVIIAAPSGGGRGAGLALLAA
FGIAVGALLARRLSSIDLLVLGAWQFLLGGTVLAGIACVVEGPPTTIAWS
SRFTLTLAVLALVATALPYLLWFGELRRASLTAVTTWTLLVPVVGVILGV
VVLDEPITLAGVIGDVIVVAGLAVVARAARPSRAETLSATDTVDYRPLEE
>pnf1650 hypothetical protein
MTRGPITPTEAADDEGADHYLNLPGAHVVATDALLAVRDNLADVIEAKAM
MCVHGDAGLGKTLSVNTSLREQPAGSVCRVQFRARPTPRDIRHTLFEALA
IGGDPPRKPIEFDRVLKDVLAERFRVLVCDEAQWMSRECFEYWRHLWDDR
FTDMAIVFVGGGDCYEVLRREPMLSSRVYVWQEFRRMPRAQVLRVIPAYH
RIWANTDPELIAFADKSAGHGNFRSWAKITAHAARTLDKIGRDTVDGDVL
GYVFSKLSGRSS
>pnf1350 putative transporter
MAALVVALLTVGLDLMVLNVALPTLAQDLGASTTQLQWIVNAYTLVFAAL
MLPAGGFGDRYGRKRLLLVGLVAFVAASAWAAYSGSTGSLIAARAVMGIG
AAIIVPLSLGILPTLFGPDQRRRAIAVWVGALGVGLPLGPIVGGWLLQHF
WWGSVFLINVPVGVAALVACVVLLPESADPHAPPLDWLGIITAVPGTAAV
VFAVIQAPEYGWTDPIVLTTLAAGVVLIVGFLVWERHTRYPLVDLGLFAN
PAFTWPTLAATAGTFTLVGVLFVLPQYLQILRHYDAFGTGLRLVPLVLAI
IIAAAAVDKIVTRVGAKIPIVTGMLIAAAGFVLASRITADSGYGFVAVCL
GVVGLGAGLALAPAVDAVMASLPEHRSAAGAGLLMAIRQVGAAFSVAVLG
TLLTLVYTRDLDPHLSALPEAVVGAARDNVAGAQLAATGVPGPAGADLAA
TSAHAYTEAMSAVFLASAAVSAVLAAAIAAKLPKQTPPPIGTSPAPGPR
>pnf1880 putative ABC transporter membrane protein
MTAVAAVPAPPRPAVWPFVRCFVEDYFRNPVNLIVLLLVPTVFVLVAAGS
IAQAMELLGRSLGSRPAVETATAGWAAAFLSGIAMYFQVRSARATDRRLV
LAGLSPARLVAARAAAGLVLGVLVSAVSLLALTARTGIGDPIRVIPATVM
FAVIYLAIGAVVGILATNPVNGAVVILFVWIIDVFIGQVGDTTEQISRWF
PTHFVARWMVGLPTGHAGRLGDLGASLVWVTAAALVAAAALVTSSRTTTR
RAAGQLRTALRLGVVELSRNPALAVLLIVVPVVFVLLAEITTPARSIVMP
LRENGATVTSTFWFPEVHAGTMTPIAVGSLATLAGLFLALDAADGDRRLR
LAGYRAGVLLTARLGVIAMAVLVVTAAALAITATVFDARQWTGYAAANLL
LAATYALIGVIIGPLFGRVAGVFVAFLIPFLDLGLVQSPMLRPEPQPWAR
TLPGYGGSRVLIDTGLTDHFDEIGALLIALAWLTGLAAVAALLYIGGYPS
HRSIRFGSSHQ
>pnf11170 hypothetical protein
MTARTITDVITRPLPPLPLTAAASAEVLPDWAQPARRHPAAQPWPENLTR
MAVGVVDSTGATGWFGPVSATVARMVFDQVAPAVIGRELAAWRAMASLAP
HGRHRQGAHLRLAVSAVELAAWDLRSHATGVPVGALLAGERRERIPVYAT
ALGIDIDHPLAPDIAAWLVDEGFWAQKWGLPGAARGETPRADAARLRRLR
EAAGERARIGVDVGGRWPADYARQMLPVLAEAGVCWVEEPGPISDADLAR
HGLARAAGEHDYEPTDQLRTLGGDIQIWQPDPTWCGGLAHTLSMVELAAR
LNIRSLPHGSGLAAALALAASAPAAAVPAIEYHLTLEPLRQDHQLDPLVP
AAGHLDARTAAGLTSGYRFGEGDAGAAA
>pnf160 hypothetical protein
MMAADSPALSSVGESVNGSATTDHPIAGSRPPWSRVFFRGLAAVTLVYPL
VYCSSYAVVVGDTPLAVAVAFCFGVLASGVIGIGAFMVRPRSSMVTETRV
VCGLLGFRRPEPARWRRRPLLVWCVVVPVLLAAVHFGLDTVIGAVWHPVS
DAEQLRANAERAEILTRNGALSAAVLYPFLVAAVPEEIRYRALVLLTQRA
VGACTIPRWVGFLVVAAVAGLSIALFAAAQAEYGPMNLVTSAIGGVIYTG
LVLYTRSLWPAISCHGFYDLMAISLTIL
>pnf1810 putative transporter
MSVLAKFRSFDLPARLLMINQFGINLGFYMLMPYLAGYLAGPLGLAAWAV
GLVLGVRNFSQQGMFLIGGTLADRLGYKPLIVAGCLLRTGGFALLVFATS
LPGLLVASAATGFAGALFNPAVRAYLAADTGDRRVEAFAVFNIFYQAGIL
AGPLVGLALMALDFRMTAAAAAVVFAILTVAQLFALSTRRAEIRAERTSV
LDDWRTVVANRRFVWFAVAMIGSYVLSFQIYLALPLQAEFVAGAQAQTLV
SALFAISGLVAVAGQLRITAWFRDRWGTGASLVVGLGILAASFLPLALIP
DPDRFGVPAAAAALLLCAMLLAVGTAAVFPFEMDTVVSLSGGRLVATHYG
FYNTVVGVGILTGNLATGAVVGAARAAGMDWALWVGLSVIGVVAALALHR
LDRPQHAEEDGQSTDVRGRHRIPEDHAIGTTLVEQEFDYTGRGHWPTKIP
AGRR
>pnf1310 putative membrane protein
MNQQQQSAVTERSPQQPLPPDSPGLLYRWGVLMARRRRTALAIWGVLLAV
CAVAYPLLENRLGAMDFGVEGSESTEVDRLVAQHFPQFGAEQAVIVLQSG
ALTATDSDFRAVVARTVTAAEEVQGVVDVVGPYDGLPGSQISADGHVAIA
LAGMDGDMAERARVARDLQDAIASTGDDSIDVGLTGYSAVQNAATELQNA
DLARAEAIGIPVALILLVLALGALAAAAVPIGVAIAGLLTAVGVLFTLTT
VTAFDSLTVAMATMVGLGVGIDYAMFIVSRFREELAHHTVADHAAIAAAV
GRSLATAGKTILVSGLVVMISLCALIIIQAPIFRGIAIGVATAVTSMLIV
AVTLLPALLAALGPAINRGALPARWRPADSTANAPGALSGRWARWAYLVM
RRPVLFGTAAVAVLVIAALPVFGIRYGLDMGTTALDDTPTGRATTALTTN
FPAGALSPVEIIATGPGDTPLTGDPAAQVNRFLAEIADDDRIDTVLPAQL
NDGRVLALALPSVAFDSMEATDLIRDLRNTATDAAGAEIRIGGSTAEFVD
LSDEMTSKLPLVVALVLTASLIFLIAAFRSIALPIKAIAMNLLATGAALG
ITVAVFQWGLGENILDFTSPGFVQVYLPTVVFALLFGLSMDYEVFLIRRI
REYWDTTGDNEHAVAAGLTHTARPITAAAAIMIAIFASFLTADILELKQL
GLALAVAVFLDAVLIRLVLVPALMRLLGDWNWWLPTRPSIRPDTNTGI
>pnf11090 putative methyltransferase
MNEPSNPAASHRESKEREPDMTKTPSTPPSWPMRPGYREDLFRGAAEYYS
RYRPAYPQPLLDDLINRVGEGGVLVDLACGTGEIAIPLHTRFGHVYAVDL
EPDMIEVGRAKAEQAGAINISWSTGKAEDLVIDEPAAQLVTIGNAFHRLD
RPLIAERVRQWLAPGGCLAILGSSTPWSGTEPWQAVAVDVVARWSGEPGR
PASAAPAPAESNTPARRTHEDVLREAGYVDVAEHQFPTPHTWTMDEFLGF
LWSTSYTARIRQDPTLAERFETDLRAQLLECEPSGQLRESIAHYYILGRN
PEPALK
>pnf11460 hypothetical protein
MKQAAWAFVLATVLTVAGAGAVHAQPPTTTPAPTPSQQLSPQSPGGGGSG
EQIPIQDPKTGGVQWDKFGGDPANAPENLDSFIADALGWLRTLALACAVG
GVLITAGVLMIGIRGRSEQAKKALHSLPVVLGATVLSGSAYTVIHVFL