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Gene list

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COG category: General function prediction only
Gene type: CDS
Genomic element: chromosome 1

Number of genes found: 21

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# Photobacterium profundum, ss9

>PBPRA3585 BA2308, Putative SpoOM-related protein
MSFFRKSFASLGIGAAKVDTVLKHDVLIPGENLPVVIHVQGGATEQQIDN
INVQLCCRYIDEVPVSRGDSEHRKEKRPQTCVLATWSLPESFVIGVNEAR
EFDVNLELPFNTPVTIGDAKVWLETYLDIPLARDPKDTDTLTVRPEPLMD
GVFTALENAGLRILQVECEAASGFDLPFVQEFEFVPVSGPYHGLWRELEV
VAYRDSDGLQLWFELDRRLKGISGMLSGFLGRGELKRHCHISAQCTPTEA
GQQVLDYLDQTT
>PBPRA3400 C3062, putative transport permease protein
MSVLFPIMHFGIGMFRSSPYGWTSQYLFGFFFTYGVYLPFWALWFAHLGV
DASDIGLLLGLGLGVRCVANVVLTPRIHNVEHLIPALRWFTLACLIACVI
YIFCGGSLWALAAVTVLFNLAAGPIIPLSDALANFYAKGKHLDYGRTRLW
GSIAFIAGSTIVGILAAKYGASVIPWVAIAGLVVALLFSMRTPAIVPIET
EHHDQPRPALIDIVKNNSVMRFLIIVALLQGSHAAYYSFSAIYWKEVGYS
EAIIGYLWSFSVVAEVCVFAFSQRLFAKWSVGMMFRLAAVGVLLRWGVTA
TMTELPALVMAQALHGVTFAAAHLAAIRYIQHAKSNQMVALQALYNALPL
GAFMAIMTALSGWLYGLWGANLFWLMAVMGIPVLLMKIESKPHSNDQPTE
LEQPMSVN
>PBPRA3461 CT0132, hypothetical RNA-binding protein
MKSSNQTTITVIAITIIGSLIFSFVSVPPAIAFAVGAVITGLAIRFMQDS
KPSPEQPIDPSQSSKTIYVGNLPYRANESDVKNLFSEHGEVFAVRLMKDK
RTGKRRGFGFVVMNSSDADTAIQNLNNKEYGQRTLKIREANDPKNLEGEE
VA
>PBPRA3490 CT0928, putative transcriptional regulator
MIAQCKDFLLIFPCLHPFQYTAYLIDSECDNMQPIIITGGPGAGKTTLLK
ALSRKGYLTFPEVSRTLIQQQASLDSGVLPWTNLPAFAELCLEVMSEQRR
LAKKGAMPAFVDRAIPDICAYLTVGGETVSQHYLDAAAGYASRVFFCAPH
EAIYQKDDERPHSFIEAQAIHEQLIMTYEALNYEVMQVPWGSVEQRACWI
LARL
>PBPRA3423 HH1638, conserved hypothetical protein
MILLTIYITIAIGVSFICSVLEAVLLSISPTYIGSLRQQNHPAAPRLAAL
KENIDRPLASILTLNTIAHTVGAATAGAQATVVFGSEWLGVFSAVLTLGI
LLFSEIIPKTLGATYWRQMAPAASTILNWMVWALTPFVWVSEQITRRLAR
GHTPPKLRDELSAMAMLARESGELAEGESKILTNLLQFRDVNVTKIMTPR
PVLFRVEAEQSINAFLSEHKEIPFSRPLVYSEQRDNILGFVHRLELFAES
QAGHGNKELGAIMRPIPVVMNNQSVPQAFERLLKEHSQLILVVDEYGTVQ
GLVTLEDIFESLVGEEIVDEADKNTDMQQLAYQRWEKWKLQHGVIESKDD
E
>PBPRA3398 OB1639, putative sodium/solute symporter
MDIQTWTFILVGITFSVYIGIAIWARAGTTSEFYVAGGGVHPIANGMATA
ADWMSAASFISMAGIISFVGYDGGVYLMGWTGGYVLLALCLAPYLRKFGQ
FTVPDFIGERYYSRTARMVAVFCAIFVSFTYVAGQMRGVGVVFARFLEVD
INVGIIIGMGIVFFYAVLGGMKGITYTQVAQFCVLIFAFLVPAVFTSIMM
TGNSIPQLGLGSTLTGSETYVLDKLDGLTTELGFTAYTDGSKSMVDVFFI
CSALMVGTAGLPHVIIRFFTVPRVKDARISAGWALLFISLLYTTAPSVAA
FARINMIETINGSDMQGVSAEQAPGWVKNWEKTGLVTWEDKNNDGKMFYS
GDERNEMNINRDIIVLASPELANLPNWVVALLAAGGLAAALSTAAGLLLV
ISTSISHDLLKKGFKPDMTDKQELLAARIGAALAIVGAGYLGINPPGFVA
QVVAFSFGLAAASFFPAIILGIFYKKMNKEGAIAGMLTGITFTASYIIYF
KFINPAASTPDNWFFGISPEGIGTLGMCLNFVVSIVVNKFTAEVPKEVQD
MIESIRYPKGAGEAHDH
>PBPRA3502 PLU0390, putative ATP/GTP-binding protein
MVHFTQFYIKVISLLHEDLTELTVNQPLNYRNTGFITSAPDIRHLPQDTG
VEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEVTQGCNL
IDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHPMKDLD
QQMIFWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSFGGDVQIE
LFSSLKGIGLDQVRRKLDTWFGPELERQLMLAAAENGETYTGESLSDKSD
D
>PBPRA3392 PLU4138, putative Anaerobic C4-dicarboxylate transporter
MIGVELFIVLAFIYLGARIGGIGIGLAGAAGVIVLSLILGVPTSQAFIPV
DVILIIMSVITAIAAMQVAGGMDWLVELAENFLRKNPKHITFYAPIVTYV
MTLMAGTGHTAFSTLPVIAEVAKEQGIRPSRPLSIAVVASQVAITASPIS
AAVVFFSGLLEPMGIGYLTLLAICIPTTFIACMVGAFVANFLGCELKDDP
IYQDRLAKGLIKLKGSGKREILPTAKPATFIFLGAIAFVVCYAAAISSSV
GLIENPALGRNEAIMTVMLAAAAAIVTFTKIDASKIAAAPTFRSGMTACI
CVLGVAWLGSTFVNSHVDGIKEVAGALLSDYPWMLAIILFLASMLLYSQG
ATTVALMPAALAIGVAPLTAIASFAAVSALFVLPTYPTLLAAVEMDDTGS
TRIGNLVFNHPFFIPGVVTISTSVGLGFLIGGIIL
>PBPRA3589 S3817, Conserved hypothetical protein
MVLDVAAMTQQSFSFSDLTPDLLLDALDSVGVYAESGLLALNSYENRVYQ
FKADDGARYVAKFYRPQRWTNEQIQEEHDFTLELADQEIPVAAPIVFSGE
TLTHFKGHRFTLFPSMGGRQYEVDNIDQLEWVGRYLGRIHNIGKSKSFVH
RPTMSLDEYLYQPRKILENADFIPDYLKKTFFSDLDLLIKELDQRWHSDW
QSIRLHGDCHPGNILWRDGPLFVDLDDARNGPAVQDLWMLLNGDRNEQLA
QLDTLLEAYTEFSDFNPKELQLIEPLRGLRMVHYMAWLAKRWQDPAFPRA
FPWFADAKYWEGQVLSFKEQLATLNEPPLQLMPQW
>PBPRA3509 S3858, putative RarD
MEEQTKKTQRGVILALAAYTMWGIAPIYFKALQNVSPLEILSHRVIWSFF
FLAALIFFSKGWVKIRAVIAKPKMLLMLTVTALLVGTNWMIFIWAVNNNY
MLDASLGYFINPLFNVILGMVFLGERLRALQWVAVVLATCGVAAQLIQFG
SLPWIALALAGSFGCYGLLRKKINLDAQTGLFLETCVLLPLATIYILFIT
DSPTANLADNPLQLNLLLVAAGIVTTLPLLCFTGAATKLKLSTLGFFQYI
GPSLMFLLAVLVYDEPFSVDNGMTFIFIWSALILFSFDGIKRHRDSKKVA
PST
>PBPRA3533 S4240, conserved hypothetical protein
MIVKSNAKTILEPERVVQLALICENPERQNELDELAQRWGLSHDENSIFA
LVLTDTQLELRKLDEAKLGAVFVDLVSGAAAHRRKFGGGRGQAIAKAVGL
KKGVMPRVLDGTAGLGRDAFVLASLGCTVQMVERHPVVAALLDDGLARAK
QDPEIGGWITERLSLLHASSQDALVKLLEDPDFIAPDVVYLDPMYPHKKK
SALVKKEMRVFQTLVGADNDADSLFAPAMALATKRVVVKRPDYAEFLANA
KPSTAIETKKNRFDVYVKAAMT
>PBPRA3399 SO2742, putative Signal transduction histidinekinase
MAQGWIVVPVSLAYLGLLFFIAWYGDKKVKWMAKYRPWIYSLSIAVYCTS
WTFYGTVGQASQNAWSFLPIYLAPIIVFTLGWRILARLILIAKREHITSI
ADFIAARYGKSQGLAVLVTIIAVVGILPYIALQLRAITMGIDQIAPDLGS
GIGINEMDTAWLVTLALAAFTVLFGTRHIDTTEHHRGMMMAVAFESLVKL
AAFLIVGVFAVGLLFELPDLQVVKTSYLESSMPNIGSLLIHTMLTMAAII
CLPRQFHTIVVENSRVKDLHKARWIFPLYLVLMGIFVLPLALAGQALMMS
SVSADTYVISLPLQQGAESIALLAFLGGTSAASGMVIVSTIALAIMVSND
LVLPLVLRRLRVSGKNFSAFSGLLLNVRRALILLLLLSAWGFYQILDNIP
SLSAIGLLSFAAIAQFAPALLGGIYWRKGNKKGVYAGLFGGSAIWVITMM
AQTSMLAGNADTNVLLWLLTPPQLPILQAITSVDWGMLLSLLVNIALYTS
VSLVTRSSLTERLQAATFVGAPLPETENASLYQTRVTVAELEMLAARFVG
RKRVHHAFRQFAEQHQAPLLPQQQASGVLIRHTERVLAGVFGASSARLVL
TSALQGRNMQLEEVATIVDEASELFDFSRGLLQGAIEHISQGIAVVDKQL
RLVAWNQRYLELFTFPPSLIQVGRPIADVIRHNAMEGLCGSGDPEKHVAK
RVEHLQRGTAHTSSRVRADGQVIEVQGNPMPGGGFVMSFIDITAFRQAEQ
ALKDANEHLEARVQKRTQELEQLNRRLVNATQQAEQQAQSKSRFLAAVSH
DLMQPLNAARLFSSSLSELAKEDETIKLSRHIESALGAAEDLIGDLLDVS
RLEAGKLQVNVHPFPICEVFDTLSAEFGVLAKQQGIQFAVLESNAVIVSD
PKLLRRALQNFLTNAFRYNPHGKVLLGVRRIKGKLQIEVWDNGPGIPLEK
QADIFDEFTRIQTSGADHGLGLGLAIARGISRVLEHPLSLRSWPGEGTVF
ALSVSRGIVTQKQQTVISQLAAEKAAPLNGVRVLCVDNEPEILLGMETLL
VRWGCDVRLAESVVGAIQQLEDGWVPEFVLSDYHLANNQTGLQVLQQCSL
RLGKSFKGAVISADRTSETQQAVRGHGFSFISKPVKPLKLRALLNQRMKS
AVKS
>PBPRA3505 SO4716, conserved hypothetical protein
MRIRQASLAEAIIVLNQISEFDHPETEASLMQRLAGHASLILVAEHEGSL
VGVKIGYRFSDSTFYSWLGGVAPAGRRMGIAQALLDAQETWAIEQGYQEI
KVKSRNCFPSMLMLLLKNAYIIENIEKKGRVADYRIYFSKLLTNKKYSK
>PBPRA3470 STM3494, putative MutT/nudix family protein
MAADKNKPEILSTEVVAQSRLFKIESLELRFSNGVERTYERMMPSGRHAV
LIVPVTADGNLLLIREYSAGTDNYELGFPKGLIDAGESAEQAANRELKEE
IGFGSNSLQALKEVVLAPSYFSSRMTLFLAQDLYPEQLEGDEPEPLEIVR
WPVSQGEELINHLDFAEARSITALFLALKQLSQ
>PBPRA3519 STM3950, conserved hypothetical protein
MQFYRNLQPIKALTFDLDDTLYDNRPVIVRAEQAMYDWLAEYHPCSHTLT
RQDWMALKQHIAMADPMLKHDVTVWRYELIKIGLMQLGYRLADAEKAAHH
GLEVVLAVRNQVNVPAETHRVLSELAQRVPLLAITNGNVDADKIGLGQYF
SRVLVAGRDGLAKPAPDLFAQAAALLGLPAEHILHVGDHLVTDVGGAKKN
GFQACWYNDQLRQLHSEPRSRLLPDIEISQLAPLLTLVS
>PBPRA3390 STM4327, putative FxsA protein
MFPVLLFLFILVPIVEIGLFVQVGGFFGLWPTLAFVLVTAVVGASLVRSQ
GIATLMSVQSRLQQGEIPAQQIVEGVMLAVAGVLLLTPGFMTDALGMLVL
LPAPRAMLAKQLMSRVKVNGMGSGFSAGFGGGQGFDNQSPFGQQGPFDGA
DPFEQQRSQETRNTDNRDGDVFDGEFERKDDKNNDQNNRLN
>PBPRA3487 STY3849, conserved hypothetical protein
MFRLITPKTDDDFARYYDFRWRMLREAWRMPVGSERDAYDELSAHRMIVT
DNGETIAIGRLYMTPDNDGQIRFMAVHPNYRHQGMGAIVLMALESLARQD
GAKRLVCNAREDAIPFYLKNDFTSQGELSDERGPVRHQQMLKHLDPLTDV
VRHPEWCQELQELWQYQIPISDKMGIKISQYTGYRFEVSALINANLNPSE
FMFAGSIFTMATLAGWGFIWMLIKERKLEADIVLVDSHIRYVSPVKERPR
AVVSVETLSGDFDRLAAGRKGRVIVEVNVYSGETLASTFTGTYMLFPSQA
EADSRC
>PBPRA3569 T4105, Putative carbonic anhydrase, family 3
MHSALRSYKGITPTLHENVYIDSSAVLIGDIELNTDTSIWPLVAARGDVN
HIKIGARSNVQDGAVLHVTRKTPDNPTGHPLIIGDDVTIGHKAMLHGCHV
GHRVLVGMGAILLDGAIIEDDVIIGAGSLVPPGKVLKSGFLYIGSPVKQA
RPLNDNERTFLPTSADNYVRLKNEYLAESENL
>PBPRA3447 VP2933, hypothetical protein
MTKLRFHHLEPLRFPLVNRLYKSYYPAGKAKKDEIIWVGDNEKGIICVVR
FKQFENIQLLTGMLVHPEFREQGLAKNLLAATKTQINCKPCYCFAFRELI
PLYSNANFHLVDKIELPEVLSNRLIRYISSGKDLVAMRYEA
>PBPRA3463 VV11174, conserved hypothetical protein
MKPINVIVSWSSGKDSTLTLIKLLNDPNYKVVGLYTTYFIDEVPFQATPL
EVVKKQAALTGLPLVTIELPEVFPPNDIYQSLVVNGLCNSGLEIDAVAFG
DMFCNGIADYRRSYIEPAGWECVFPLLGQDSQRLAQEIIECGIETLVVTV
DTSQLDGKFCGEWYSHQFISSLPMHTDPCGEDGEFHTLVVKAPCFDGELK
IELDECDREGRFHYQRYHLVKE
>PBPRA3584 Y3285, Putative Hemolysin
MVKSVALKQGYSVAEEIANSVSHGLGLIFGIVGLVLLLNQGNAANAGFMS
MASLSIYGSSIILLYLASTLYHAIPYERAKRALKTFDHSAIFLLIAGTYT
PFLLISLRTPLAITLMSVIWGLAIIGIALKIIFVYRFKRLSLITYLTMGW
LSVIVIYQLAISISTGGLVLLGLGGVIYSLGVFFYVNKRIPYNHAIWHMF
VLGGTVCHFFAIYYYVKPI