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Gene list

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COG category: General function prediction only
Gene type: CDS
Genomic element: chromosome 1

Number of genes found: 25

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# Photobacterium profundum, ss9

>PBPRA0407 ATU5333, putative 2-hydroxyacid dehydrogenase family protein
MKNHSSIEQPSVSETPLTQKIAFLDRATIPKHIQLPSPNFPHEWQEFATT
KPEQVIQRLQHATIAIANKVILDADVLSQLPQLKMIAISATGTNNVDLAY
CHQHKITVANIRGYATNSVPEHVIAMMFALKRNLMGYHQDIQAGVWQQKK
QFCFFTHPISDIAGSTLGIIGNGGLGQAVAALAKALGMEVLYAEHKGKET
CRDGYSVFNDVIAHADVISLHCPLSEQTHNLIGNDEFNRMKPNSILINAG
RGGLVDEDALVSALKNGDIAGAGVDVFTQEPADMSNPLIANADLPNLILT
PHVAWGSDSAIQTLANQLIDNMNAYVAGQPQNLV
>PBPRA0579 BPP2504, conserved hypothetical protein
MLEGTLWLFAMCLLLGSVVGLFAGLLGIGGGLLVVPALVWLLPLAGIDNS
LVMHMALATSLASIVLTSGASARNHIKRGNIDYSIVKSMAPGIVLGGLGG
SVIAEMVPTELLPKIFATIVLLLALQMLLSMRMTSQRPIPSSIACACSGG
VIGVISSLAGIGGGSLTVPYLSWHGVEMRRAIGCASLSGAIIAVAGMVGF
IFSGLNEEALPPMSIGYVYLPALIGIVSTSVITTRYGAALASRLPTMTLK
KIFAIFLLFIGSKMFLG
>PBPRA0589 CV3748, hypothetical protein
MVLLLGIPAMLGMLVLAKPMLMVLFMRGEFSLYDVNQAAMSLWALSAGLL
NFMLIKIFAPGYYARQDTKTPVRYGIIAMVSNMFFNAIFAYFFSYVGLAM
ATALSALINAGLLYRGLHIANVYRITKKTLFFVLRLVIAGAAMVASLLWL
MPNIDLWSEWSTLNRATWLAGLIAVGAFVYLIFVMILGIRPHHLRTDS
>PBPRA0577 HD0172, putative MutT/nudix family protein
MIDGDGYRPNVGIVICNSHGQVFWARRYGQHSWQFPQGGIDEGETPEQAM
YRELYEEVGLTKKDVRILASSRHWLRYKLPKRLVRWDSKPVCIGQKQKWF
LLSLECDESRVNMQRGSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRALKE
FAAIAMPFKERKERKLKRYKSKRG
>PBPRA0617 HD1589, hypothetical lipoprotein precursor, NlpI
MIANRLKLVCIAAVMVLTGCASSQAKWTHPPMAVPFQPTIQQQIQLARID
QLLKRDDLDKATVAQMFYERGLLNDSLGLRDLARLDFNQSLSLKPNQPDV
FNILGVYFTQSAHFDAAYEAFDSTLELNPQHPFALRNRGIALYYGGRLAL
AHDDLLVHYQQGVNDPYRVIWLYFVEFEQDSETAAQKLKLRYDASDKQDW
GWQIVRLYLGEITEAQFLNEIATKSESNDQLAERLTEGYFYLAKVYQQQN
DFSAAVMLYKLALAGNVYEFVEHRFSLLEISRIMTAYEAQNGPKDTN
>PBPRA0541 MT3973, putative glutamate synthase, small subunit
MGKPTGFLEFGRELPQKVDPSVRIQDNKEFVLNDDFGDKINTQASRCMDC
GVPFCHNACPIGNIIPEFNDAVFRDSWEEAWNILSSTNNFPEFTGRVCPA
PCESGCVLGINQDPITICNIEKTIVETAYREGYAKPKTPRTRTGKTIAII
GSGPAGLSAAEQLNSAGHCVTVFERDEKVGGLLRFGIPDFKLGMDIIDRK
IDLMSDAGVKFEVNAHIGVTVNAQQLRHEFDVVLLTGGSTVPRNLPIPGR
ELTGVHFAMEFLAQNNRRANDMDLKTEEIHAKGKHIVVVGGGDTGSDCVG
TSNRHGAASITQVEIMPIPPGQRPTNQPWPSYPMIMKTSTSHEEGCDRHW
NILTKEFIGDEAGNVKALRIADIQWQEAKPGERPGFDEIAGSERIIPCDM
AFLAMGFLHPEPTGVIAQLDIKLDERGNIATTGFATSQKGVFAAGDMRTG
QSLVVRCINEGRECAREIDDFLMGNSNLEAKDDSLMLSQA
>PBPRA0588 NE2405, putative MviN protein
MNIRQTNLVGTCGITRLIWRQILPAFGLEVTFLSHLYEVFFVSKRLLRSG
LIVSAMTLISRVLGLVRDVVVANLMGAGAAADVFFFANKIPNFLRRLFAE
GAFSQAFVPVLTEYHSSGDIDKTRQLIAKASGTLGVIVTLVTLVGVLCSG
AVTAMFGAGWFIDWLNGGPDAGKFELASLLLKITFPYLWFITFVALSGAI
LNTIGKFAVSSFTPVFLNIAIIGCAWLISPNLEQPEIGLAIGVFLGGFIQ
FVFQLPFLAKAGLLVKPQWGWNDPGVTKIRKLMLPAIFGVSVSQINLLLD
TFIASFLMTGSISWLYYSDRLLEFPLRLFGIAIATVILPALSR
>PBPRA0453 PLU3952, putative cyclic AMP phosphodiesterase
MQTYSLPQTNPNSVVLLQITDTHLFADESGCLLGVATKDSFNAVIDAVDA
SARPFEAIVATGDISQDHTDESYQHFSDGISRWSQPCFWLPGNHDYQPAM
HSVLPSPQIKSCEQVLAGDYWQVILLDSQVQGVPHGELSEAQLLMLDATL
KAYPERHALILLHHHPLVAGSAWLDQHQLHNNEAFWQVIDKYPKVSAVLC
GHIHQELDCIYHGVRVLATPSTCIQFLPDSNDFALDKTNPGWRYLELTRE
GQLNTDVCRLQGRRFIPLFNSAGY
>PBPRA0451 PLU3953, Putative MutT/nudix family protein
MTQKVSLSENQPFYTKDDVEILSSEKVYNGFFSMVKYRLRHKLFNGSWSK
PLERELFERGHAAALLPYDPIEDKVVILEQFRIGAMVAEFTPWQLEIVAG
IIEPGESAHDVACREAVEEAGLTVTDLEKVTRYLSSSGGCSETLDVFVGR
VDSTQAQGIHGLIDEGEDIRVHVITRQEAYQWVESGKIENAASIIALQWL
QLNYLRLQSK
>PBPRA0389 RB0282, putative immunogenic protein
MAFKKLLQMSALAGVVMTAGMANAQEFVTIGTGSVTGVYYPTGGAICKLV
NKNSKEHNVRCSVESTGGSIYNVNTMRAGELDFGIVQSDWQYHGYNGTSK
FEKQGPYKKLRAVFSLHTEPFNIIARTDAGIDSVEDLKGKRVNIGNPGSG
DRATMGVVMDALGWTNADFKLTSELKGSERSQALCDNKIDAFVYVVGHPN
GSIKEATTSCDAKLIPATGAKIEKIVADNPYYTATTVPGGMYKGSNEDVN
SFGVAATMVSTTDVSDEIVYEVVKAVFENFSTFKRLHPAFANLKKEDMIK
NGLSIPLHPGAIRYYKEAGLLTK
>PBPRA0624 RIMI, putative ribosomal-protein-alanine acetyltransferase
MINKIVPLESQHHDDVWRIERAANTFPWAESMIRKEPNNIATNFVLLVDD
ILVGYCYGQLVAGEATLLNIAVDPNLQGKGYGKALLEGFIDILQQRNAED
IWLEVRASNARAYKLYEAAGFNEINRREGYYPSENGREDALIMTYLVM
>PBPRA0556 S2814, putative formate acetyl transferase-related protein
MIYINTSFPLSRYIISSSIKNLKTNYISSENKVMITGIQITKSANDDLLN
SIWLLDSETNEARCVVAKAGFEEDQVIAAADLGEYESRDVAIEVPAKVEG
GQHLNVNVLKKETLEDAVAHPEKYPQLTIRVSGYAVRFNSLTTEQQKDVI
ARTFTSSL
>PBPRA0376 S4535, hypothetical transcriptional regulator
MNKKPMIALLAAALLPGMVSAHNIQLGQKTPNVSVADKGEIVLSNDEIAY
QEWDNSDLVGKVRVIQAIAGRSAAKEMNAEFIEAIKVAQLPNENYQTTTI
INQDDSIWGTGGFVKSSAEDSKRDFSWSSMVLDASGSVQSAWDLQKESSA
IIVLDKQGNVLFIKEGKLTSTEVKQAIMLVKENI
>PBPRA0539 SF3253, putative glutamate synthase, small subunit
MSQNVYQFIDVARVDPAKKPLNIRKIEFVEIYEPFTQQQAGAQADRCLDC
GNPYCEWKCPVHNYIPQWLKLANEGRILEAVELAHQTNTLPEVCGRVCPQ
DRLCEGSCTLNEDFGAVAIGNVEKYITDKAFEMGWKPDMSHVEWTDKKVA
IIGAGPAGLSCADILVRNGVKPVVFDRYPEIGGLLTFGIPSFKLEKEVMI
NRRKVFTEMGVEFQLNTEIGKDIQMNDLLKGYDAVFLGVGTYKNMRAGLE
NENAAGVYDALPFLVSNTYKVMNLNTEIDFTDMKGKRVVVLGGGDTAMDC
VRTSIRQNAKNVICAYRRNAANMPGSRREVKNAREEGVKFMFNLQPLSIK
INDQGQATGVNVVKTKLGEPDEAGRRHPELVEGSEHLLEADAVIMAFGFQ
PHAMPWLEKYAVDIDQRGRIKAPETATFPFQTSNEKIFAGGDAVRGSDLV
VTAINEGRLAAQGILDYLEV
>PBPRA0388 SMB20291, putative TRAP-type uncharacterized transport system, fused permease component
MTKTTDTSPDVQDMVAQADTGARNPAGIAGRILWLVPLCWSLFQLWYASP
LPFIFNFGILNDTEARSIHLSFAIFLAFTAYPALKNSPRDHIPVVDWILA
LAGSFAAGYIYIFYTSLAERSGAPTPMDIVVAVMGMILLLEATRRALGPP
LMVVAAVFLLYTFGGPHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGV
STSFVFLFVLFGAMLERAGAGAYFIKVAFSLLGHMRGGPAKAAVVASGLS
GLVSGSSIANVVTTGTFTIPLMKRVGFSAEKAGAVEVAASTNGQLTPPIM
GAAAFLMVEYVGISYVEVIKAAILPALISYIALLYIVHLEACKAGMTGLP
RRYKPTMAQSLLSFVVTILGLIVISGAVYYGIGWTKDVFGAAATPMIAVV
ILVAYVALIKVSASYQDHTMENPDEELTEVPEPGPTIKSGLYFLLPIVVL
VWCLTVERFSPGLSAFWATVFMVFILLTQRPLLALFNKEKTLTDAAREGA
NDLIESLVSGGRNMIGIGVATAAAGVVVGVVTLTGIGLVMTDFVEFISGG
NIMLMLLFTAIISLILGMGLPTTANYIVVSTLMAPVIVTLGAQSGLIIPL
IAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQGFTYDIRTA
ILPFMFIFNTQLLLIDIDSWWHLTLTIVSAVIAMLTFSAATQGWWLTKTK
WWEVALLLLITFSLFRPGYWWDMVYDAKHEMPGTLIVDAADKLAVGQPLE
LQVSGENLEGKYITKHVLLPFDEDAIDPNDRIASTGLMLRQDGEKMIVDM
IEFGSPAEAAGIDFDWEITKVSLPAVRPMKEWVFVPTLLLLGALGWNQRR
RAKAELTK
>PBPRA0563 SO0948, hypothetical O-methyltransferase
MSGSNRQIFTYIGIILLINKGGRMAKGFTFKQFHVDDGGCGMAVSTDGVL
LGAWATLPKQGKLIDIGTGSGLLALMMAQRTAPAPCSIIAIELDDSAADA
AAKNFSNSPWSSSLHCVKQDIQQWNRTQPKNNIGNIICNPPYFNFGLQAD
SQTRATARHTDTLTHDALLQSITHLLAPEGIVSLILPEYEGRQLIQAAEK
YGLQCQRLCEVKSTEKKPVSRLLIELTSSTVKSAPQKEALCIHDSGQYSA
QFIALTRDFYLKL
>PBPRA0454 STM3182, conserved hypothetical protein
MLYIHGFNSSPLSLKAQVMAEYCKQHRPDIRVEIPQMPCYPAQAATFIDD
LVSNFKQDYTIGLVGSSLGGYISTWLNSRHQLPAVLVNPAVKPYELLQDY
LGEQVNPYTNEKYWLEPQHINELRVMDVEQLVDPKQFWLLQQMGDEVLDY
RQAVAKYAASKQTVEPNGDHSFVDFERFPADVIQFLNL
>PBPRA0397 STY3480, putative GTP1/Obg family protein
MKFVDEAVIRADAGDGGNGTVSFRTEKYVPRGGPDGGDGGDGGDVYLLAD
ENVNTLIDFRFERFHAAERGENGRGGNCTGHRGEDKILTVPVGTRAIDEE
TGEVIADLTDHGVKVMVSKGGFHGLGNTRFKSSVNRAPRQKSMGSKGEIR
HLRLELLLLADVGMLGLPNAGKSTFIRSVSAAKPKVADYPFTTLIPSLGV
VRVDAERSFVIADIPGLIEGAADGAGLGIRFLKHLERCRVLLHMIDLLPA
DGSDPVENAFTIINELDKYSDKLANKPRWLIFNKVDLLSEEDTQAKISEV
LEALAWEGDYYCISALTRDGTKELTYNLMTTIESLPQNKYDEIEEKVEKV
EFKWDDYHAEQIKKAEEDDDDDDWDNWNEDDYDVEIIYKP
>PBPRA0396 STY3481, putative membrane protein
MSTHNPAVGMALALTTAVFWGALPIAMKQAVEVMDPFTIVWYRFVAASIG
LGAWLFWRKQLPQVKSARLPDIGLLLLGSIGLAGNFVLYNSALKFLDPSV
VQVIIQLAPVILLLSSVWLFKEKLGVHQIIGVSCLVFGLLLFFNEKLVDL
LTSFTGYTLGVLLAVVAALVWVVYALAQKCLLKQFSSPQILLMIYVICAL
MLTPMAQPEQLLLMDSRQLGMLMFCCINTLVGYGAFAEAMARWQASQVSA
VITLAPLFTILFVDLASLIWPQFFVAADLNTLGYLGAMVVVSSAMFCAIG
HKIIRQHK
>PBPRA0634 VC2346, putative SerB-cotransposed membrane protein precursor
MVIMKVKKTRLQQTWQLFVLVFSLGGLVAMLEYGSDVNIRNYEVLSEQTQ
SLSRLVVRQAAESASKDVVDNNQDKLKALVQQVSQEALILDASIYDLEGI
TLAKTEEAMPLEQVTGLSTPLAIASFGRQQIVEPIFSGDNIIGFMRITLE
HGKLLENANNQIEEMTSIVRGLIIAALLIGFLLAYTFGRRKDIWHFPFLL
TANAKD
>PBPRA0528 VP2476, putative permease
MPKPFKVESRHWMLIVALGIAVYASYRLIEPYIGPIVMAFIISLLYYPLH
ARIESKISNKPNSAAILSCILLTFIIVIPLLIVFSSIVHQGTTFSKDSYT
WFSSGGAKELLAHPYVQKVLLLIEKWSPFEGIDTQAILQKIASAASKFGA
QLLNISAKILGDATNFVISFMLMLFVLFFLLRDHTKMVNAVRHVLPLSRS
QEDVLLTEVEQVAKSAVLGSFLTALAQGFAGGFAMWLAGFPGLFWGSMMA
FASFIPVFGTALIWLPATLYLLLINQWEWALFLSGWGIIVVGSIDNILRP
LLMQGNSGMNTLLIFFSILGGLHLFGLIGLIYGPIIFAVTLVLFKLYEVE
FKDFLDQQNQS
>PBPRA0485 Y0747, putative permease
MIIVRYLTRETLKSQLAVLFVLFLVFISQKFIRILADATDGSIPGDLILT
LMGLYMPSMALLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIQ
AALLLAMITGSVAAFNSLWLAPWSSEQETQVMERVESDVGLDLLVKGQFQ
PAPDGKGVVFVNDITDKGSKLEKVFVAQIVARDTMRPSVMVAERGYVSEL
DDGRQVLDLKDGTRYEGVPTRLDYSVTEFENYQALIGQRAIREKNRDWDA
LPTPTLMQHSELAARAEFQWRISMFLCIPLLTMVVVPLSSVNPRQGRFAK
LFPAVLIYLVYFLAISAAKSAVEDGSLPSYIGLWSINAAMFVVAIALNSW
DTMPIRVLKDKLRRRG
>PBPRA0543 YHCC, putative Fe-S oxidoreductase
MQLHELVNTFGQDLQRRYGEKVHKLSLHGGFSCPNRDGTIGRGGCTFCNV
ASFADEQAQYLPIRQQLAQRAVKTDRANRYLAYFQAYTNTYAEVQLLKNM
YEEALQAANIVGLCVGTRPDCVPDAVLELLASYCEQGYEIWLELGLQTAN
DKTLKRINRGHDFACYEKITKRARAMGIKVCTHLIVGLPGDTKEDNLETL
KRTIAVGTDGIKLHPLHIVEGSIMAKAWKADRLEALSLETYTEIAAEMIR
LTPPEVVFHRVSASARRPTLLAPTWCENRWLAMIDIGKYLDQHGAQGSAL
DNSFIYQPILPKKS
>PBPRA0622 YPO3476, putative acetyltransferase
MLIRTEAPADILPIDRLLKTVFETDAEADLVMRLRENSHRTLSLVACSDD
GEVIGHILFSPVTVDDVDDNWQGLAPLSVKPEYQRQGIGKALMEEAKIML
ADFGYPVVVVLGHSEYYPQVGFEKASEHGLGCIWEVPDEAFMVLEVIPEH
LAGKSGVVKYSEEFSAL
>PBPRA0486 Z5874, putative permease
MFKILDWYIGRTIIATTALTLSTLVGLSAIIKYVEQLRKIGDGTYDLWKA
LIYVLLSMPRDIEMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDI
GLSVLKTAVPLMLIVMVLGQWGAPQAQKSARELRAIWTSGGNILSVQSGV
WAKDGNDFIYIGRVHEQSTLNAVNIWQFDDKNTLSKMVFAKSASFTEQQG
WLLADVTVTNISKIQQTNTKFDTLPWKTSLSPDKLAIVMVKPEELALSGV
YDYVSYLKESKQDASRYELAFWRKLLQPISIAVMMLLALSFVFGPLRSVT
MGARVLSGVIFGFTFYISNEVFGPMSLVYRLHPAIGALGPSIVFLFITIY
LLRRKL