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Gene list

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COG category: General function prediction only
Gene type: CDS
Genomic element: pHCM1

Number of genes found: 11

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# Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

>gid:896217  HCM1.125  putative membrane protein
MMTESFFDWVVYCITGVILASAFLEGKRTRFPAAFFYGSIVLLVVLIVAG
ALNWWFYRSKFGSVVVIFAATTLLMTRFRLVIYAFRFRTLVADLQSHVAK
GFRIILVLPENEDEKTVLLSKLSKVIHSGTLFYTRTALGPYSGDLLHALG
QKHRNGEGYLLLCEQQLPARTWLSTVENGQPEKSIAVNFHSIPDME
>gid:896332  HCM1.178ac  putative DNA-binding protein
MSEALKSLNNIRTLRAQGRELPLEILEELLEKLSVVVEERRQEESSKEAE
LKARLEKIESLRQLMLEDGIDPEELLSSFSAKSGAPKKVREPRPAKYKYT
DVNGETKTWTGQGRTPKALAEQLEAGKTLDDFLI
>gid:896388  HCM1.207c  hypothetical protein
MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSGQLHIKE
LYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQAL
GGRINDHIVNYYLHGESLSKLASGI
>gid:896482  HCM1.246c  hypothetical protein
MIAVIFEVQIQPDQQTRYLTLAEELRPLLSHVAGFISIERFQSLATEGKM
LSLSWWENEYAVLQWKNHVLHAKAQQEGRESIFDFYKISIAHITREYSFK
KDKDNV
>gid:896527  HCM1.271  hypothetical protein
MNFRALFLSMQRVFGIFSRRENDVSELMMKDAANFSPFAQIIGEQKYTVP
DHPNPEVLKFIEYPTRPAGIQTFNEQSILSLYRDKLHSISMMLAISDGDI
REDAYTFTNLVLKPLIEYIRWIHLLPASENHHHNGIGGLLSHSLEVAMIS
LKNANHSELRPIGYQDEEVVRRKVYLYAAFICGLVHDAGKVYDLDIVSLN
LSETLTWAPSSQSLLDWARENNVVEYEIHWRKRIHNQHNIWSSVFLERIL
DPVCMSFLDRVKKERVYAKMVTALNVYNDGNDFLSKCVRTSDYYSTGTDL
NVLRDPIMGLRSNDAAARAIGTIKHNFTSININNYKTKPMHIIIVNGEVY
LNENAFLDFVLSDFAAHKFNFPQGDAGKTVLVESLVQRGYVEPYDDERVV
HYFIPGTYSENEIASIFRNGIGKLEFYNLLKLRWIGLIFDSYKIPDSVPG
LFSVNANKDFIYIDEQKTVTEYRRPVPGRESVTRVTDTVNDAIENTPQYG
LQLVNGPDADSNNIISSENTESITDSLEESGADISNEIFETQVVTAIDTA
ETVNADEPEQVEEHDDRSQIHLVEQLHEMLLSAPLPHHAVINIDSVPYLD
LDAAIALIPGIDEAAFCNGPFFQLTYRDGSLDGMWIVRDVNNLRLIQLGD
NCAGMQVSTSEPRNTSSLKSLFDTSMYQPLDIPEAPSVNEAASPPQTPLE
LPQPRLNAPVAEEASSVAEQTNAHSEPDSVIATEYEQYGHLLEETLDSDG
EAYSDLIASDSTEAEYPATDPQSSDFAQLPRETALSVAPGDLDYSEGAIK
PPAPDATGKETILTSPEPAEDVRETVAAVEKASHLSPALARLFAVSTHAE
KKHEKTQEPSPVKEVKNPTSSTTVKAPISIEPPGAEEKEAVEEFTLLNDG
EVTELEYVEIATMLHQILTKLSGSFKRKRKNRFMVLTQNTFYLTQSCIEK
YGTQLNAPELFNQLPQYQVTSGAVVNTKCIAFNIPTLVAASDRAKVDIEL
IINKLKEVGNL
>gid:896528  HCM1.272  putative membrane protein
MTKSKRTNLHAQENFYRPILEYRSASVLLICAVIMLVMGFRSDGVNIAPI
ILYTAVFLLLVCLYRCKTAHPYLMAHWRVFQRQIMFISLKSLRTINKSNF
FSNERKYRQLVQEYKKNNRPVPDRKTYFCNGFEWGPEHADRAYQIANLSS
DKREIALPFVLSPIARHFETMARSMGGNNAIFAVDRRAPIFVTEDNWFGH
TLITGNVGTGKTVLQRLLSISMLHLGHVIVVIDPKNDAEWRQSLMDEASE
LGLPFYKFHPAQPSSSVCIDVCNAYTNVSDLTSRLLSLVSVPGEVNPFVQ
YAEALISTVITGLSYTDKKPSIYLIHKNMKSHMSVVNLTIKVMECCFARH
YGPDVWMEKVKYASNDTLQVRFKRLTEWFNAHFLNYEGAEPIEWIDTVGR
LVDYSMSDPEHMSKMTAGIMPLFSRLTEQPLNELLSPSPNTLTSREIVTS
DGMFSTGGVLYISLDGLSNPESARAISQLIMSDLTSCAGSRYNADDGDMS
SHSRISIFVDEAHSAINNSMINLLAQGRAAQIALFICTQTISDFIAAANA
ETANRITGLCNNYISLRVNDTPTQTLVVENFGKSPISTNMVTYTTGSETT
LPHNNFSGSISERKQTTLEESIPKELLGQVPKFHIVARLQDGRKVVGQIP
IAVSEKAMKPNTTLLEMFLKPAGKVTLRQNVGLSYLNKYLRKLH
>gid:896025  HCM1.39c  hypothetical protein
MIHSFKDRRLEKFFRNGKSTAGIPAELINAISCRLETLNNVKNERELLSG
SLRYERLRMTANRYSSIRVNSKYRLFFEWNDGVHNVHLSAHDYKSLIH
>gid:896050  HCM1.52  hypothetical protein
MVYGLENIRIALADNLTTPRITRLQITGGPTADNVELTWSPAGTNVYAPE
YPRLFPSFEPSENYALSVTVSDSQSNSKTYTQKFSYLPNNLVQLHNLRTL
SVSSALKTSLNEPLAYLSTNVLRKSNGEIAKTSRVRR
>gid:896070  HCM1.56c  putative periplasmic protein
MRKILTGCIIATAIASVYPAAAQIFSYSYTDTNQLAKTLKPATQSYLNPA
STMTLNLISGLDRYERVSVTRDSDKKVMYSAVTGKISVADRIVAADGTEY
YGKDLALPALGEGAFTVINDTLDLQQAVVSSSTYHFTIDTTAPKYTSIYP
SQNAGYEMVLSGPVWGLGRGGSGQFSIFADGVDDANGIDKIRLVIKRGNG
TVVSDNTLSYDTAAKRAFYPWIKDSVTQPGMPTSDLNEEFTFNFIITDKA
GNTLNIPPQRFLFDDQIGEYTPFAVHDSRVSTSVVPGISSGYVPFVRGLS
VLENPYRMVIRIPRTNWKPYRNGGITILNNYGGAKVISEDTTYVYVEVKL
PQGALDINYYRPVNTYQWSGGDLTQYASWLNWDPASVKSPAWGSPAIERQ
MSDGTWFNSVNWKYFKASDMPVNLTQIRFNVQARPYDQKITGGATCNIPA
GSTSCTVALTQAITNGTTGYLHSGYEVRSTTESTFFMPIWENVVWHTLGP
SVTGYDYNDTTNILQVYINQPGDGSYFDTVKLSRVWLSDKSRNNADINVT
GTLTGRNTATGNYTYEFNLKLIPEGSYNVQLNAQDSFNNTGSLDYKTVTV
DNTPPSISISYETKPITSSVTVYGLENIRIQLADTLTKPSLTRMTLRGGP
VSDAVELSWVNLGNNLYAPNYPKIFPSLNDGETYTLTVQAKDEMNNVKES
AVEFSYLPNNLVRLENLKTISVSTALKTSDDTPLAVLYASQLRKKDGSIA
TGKQDAILTVRKDAAFGVTVNGVSAAPGESKNVQLDLGLGDSRSFPIFPS
TSGVVGTSEFMLNIEELK
>gid:896449  merC  putative mercury transport protein
MGLMTRIADKTGALGSVVSAMGCAACFPALASFGAAIGLGFLSQYEGLFI
SRLLPLFAALAFLANALGWFSHRQWLRSLLGMIGPAIVFAATVWLLGNWW
TANLMYVGLALMIGVSIWDFVSPAHRRCGPDGCELPAKRL
>gid:896473  tetA  tetracycline resistance protein
MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALY
ALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLG
RLLSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGG
FAGEISPHSPFFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSN
SVYITLFKTMPILLIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFSL
AGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWL
VFPVLILLAGGGIALPALQGVMSIQTKSHQQGALQGLLVSLTNATGVIGP
LLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQAQGSKQETS
A