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Gene list

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COG category: General function prediction only
Gene type: CDS
Genomic element: pMP118

Number of genes found: 22

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# Lactobacillus salivarius subsp. salivarius UCC118, UCC118

>LSL_1930 Conserved hypothetical protein
MRSNKEVRDDIIEKLTTVVDPELNIDIVNLGLIYNVDLDEDGICLVEMTL
TTMGCPLTNILADMVTRALRDIPEIKNVDVEFVWEPMWTTDRLSRYAKLA
LGIH
>LSL_1934 Putative oxidoreductase
MTNDVVRYGVVGTGYFGAELARAMRDNDGAKIVAVFDPENGETIADELKC
EAVDNLDSLVTRDDIDCVIVATPNYLHKEPVIKAAQNHKNVFCEKPIALN
YQDCVDMVNACKEAGVIFMAGHIMNFFNGVHHAKELINEGAIGDILFVKS
VRNGWEEPQPSISWKKIREKSGGHLYHHIHELDCVQFIMGGLPTTVTMSA
SDVAHNGEQFGDEDDLIMMNLEFPGNRYAHLEWGSAFRWGEHYVLIEGTK
GAIMLNMYDTGGTLRVNGKDTHFLVHESQEEDDDRTRIYHSTEMDGAIQY
GHPGKLTPMWLHSLIVKEMKFLNDVLHGMEVPDEYKKLLDGTAAEEAIAT
ADAATLSNVEDRKVKISEITK
>LSL_1881 ABC transporter, ATP-binding protein
MSVLEVKDLHVTVEGKEILKGVNLKMSTGEIHAIMGPNGTGKSTLSSTIM
GDPAYKITKGDILLNGKSIIDLPVDERARMGLFLAMQYPQEIPGVTNAEF
VKSAINARRPKDDPIPLMDFIKRLDETLETLDMSEEMADRYLNEGFSGGE
KKRNEIMQMMMIRPEFAILDEIDSGLDIDALKVVSRGVNQMRGDNFGSLI
ITHYQRLLNYIVPDYVHVMMDGQLVKTGGPDLAIRLEKEGYAKLRDELGL
DIKLVDENA
>LSL_1804b ABC transporter, permease protein
MTNFLYQLEIDFKRIILRNPAFFMFDLAMPLTFYLLFTKALPQYSSTMQW
KVDYLVSMAIYGILLGSIMTVAHTLSSDIDRKFTLFIDLSPFPKLMYYIE
MIIIFEVLNLLCLVGIGLAGILVNNLTLPTKVWILLLILIPIMSLPLVLL
GILISSFKDSNVINALANILVFPMAICSGLWWPLSVLPQWLQKIGKVTPT
YYISNLSNNILHGNSINYNSLVGLIIWFVVLVLALGISYIFTSKKDWKN
>LSL_1886 Hypothetical membrane spanning protein
METTKITPKVFIDRVLGGTAIGIIVGLIPNAVLAAILKMFGTNPFAVHLG
QAAIIFQLGTPLIIGTLIAQKFGFDGMKMTVVGGAAFVGSGVIKYFPALN
KTGAYVGAGTGDIINTMLTASIAVGLILLIGDKFGSVAIVLTPIVVGAGA
GLIGFYVYPYVTAITSAIGNVINTFTELQPVLMCILIACSFAVLIISPIS
TVAIAMAIQVNGLAAGAAAMGVAATTLVLVVNSWKVNKPGVTIAIALGAM
KMMMPNLFRRPIILVPCFFTAIISAVPVALMSISGSPASGGFGLVGLVGP
LASIEKGLGVVAALLAWLVIPVIASLVGQFLFEKVFKLYDRKDVFEFLG
>LSL_1928 Carbon-nitrogen hydrolase family protein
MTLRIALAQIPVEHGKPEENYKKVAQYLSKAAQAKADVVVLPELWNTGYD
LARLEEIADVEGQRTKEFIQAKAQEYKIDIVGGSVAIKENEQFYNTTYIV
DKQGKLISEYRKVHLFRLMDEDKYLAAGEQKNVFELSGVKSASFICYDIR
FPEWLRTVAKEKLSIIYVVAQWPQTRIEQWKALLVARAIENQAYVVAVNR
VGDNPDNKFNGHSLIINPLGEVLSDSGDQETLTVYDLDTSEMEKFTQQIH
VFEDRRPELYD
>LSL_1871 Predicted hydrolase
MYYNAALVLEGGAMRGLYTSGVLDTFLEHDIQFDCVIGVSAGSLNGANFV
SKQYQRTYNVNVKYRKDHDYISLARPFKHESIINLDFLFDDHGLDWHNFD
NKAYLKSETDFIVVATSLESGKAVTLRNPQPGQDLIDALEASSSMPFISK
PHNTSKGLCLDGGIANSIPFDIAQKMGFQKIVVVRTRPRDYRKKPTSFAL
KRLYSNSFKEYPEFVKTAIRRPEMYNHSVEVLNKLEHNDEIFCLAPNDPV
KVGRLEHNTKKMTELYNIGRNDAESNLEAMLNYLQKSEPLYD
>LSL_1790 Transport protein
MEFPIMCKKNQSKAKRSVLAFYVYFNYFVWGSSIILVSQFHSWFMELWHT
DLKGISIVISMLGLGHLITVLLAGWFSDKFGRKNTIIIGTISNIIFLIGL
LISRNIWMASICSLFLGNANSFNDSGSYPLLTEKFPEKPASMNALVKASM
SLSQTILPLVIAAVHSAYIIIPAMAVMLGLLLLKVSVTNFGKNGSIVKET
VSEQKEILETSTNKPSVLIDGVGMVILGFTLSFIFYMYSQYAPVFAEKVI
GSTPVFSKTLISWYAISSLISVFITSTVVRKVHPFKVLLTYSIVAAAMLA
VMVVHPTPTIARLTSIAIGFFAAGGIWQVGLTILSRYFPREKGRVTGYYS
FAAALTYFVGPIVSTFILDDTAASLVHVFVLDVAVSVLGIIVMIILAVRC
FKYKFI
>LSL_1941 Hypothetical membrane associated protein
MKIAVVGGTGLVGQGILLELSKDTTLELHSISRNGKRPNSIAGVNYHSFD
LAHDTSWHSLLQTSDWVIDCVGILLPNKSKNQTYENSSIEPAKLIIDSIA
NFDNKFLFISANSAPFFLNNYLHAKRTVENYASRKLGNRAISVYPGLVYS
KFRRSNYYPAVILDFLLKFKLFSFLRKFRPISRERFAKEIHYIIEGKNSS
LTYRI
>LSL_1789 Transport protein
MKKQNYAGVAASVYINFALVGMATIIISQYSSYFQKAWNTDVKGISTVLS
VVGIGRILTILFAGVISDKIGRKKTMIIAITSDIIFLLGAAFAHNLFMAC
VAALFFGVTNSFGDSACYPALTDAFPEKSATMNSLVKAAMSLCQFLFPFW
VASVSNARLTAIILAVALFLDILLVMWTPFAPHDESKKTEPKAEVKQETT
TVSSANQPKMAIDGSLIIALGFTICFTFYVFSQYIPNFGINVLGVAPATA
KTLLSWYAMSSMISVFVTAIVVTKVKRLTLILLYSTLSALGLLLMVLSPS
LMTARIGSIAVGFFGAGGIWQVGLSVLTSYFPTGHGKLTSYYSFMASLTY
FLGPLLSSFVISDTAASVLSVFWITAVDTIITVVVTLLLIQRSRKFDVK
>LSL_1746 Oxidoreductase
MALTDTYKLNNGVEIPVVGFGTWQTPDGEVARESVKTALEVGYRHIDTAA
AYGNEVSVGQGIKESGINRHDIFLTTKLWNDSHGYEATKKAIDLSLQRLN
TDYLDLYLIHWPNPVAIREHWAELNAESWQAMEEAVKAGKIRAIGISNFR
RHHLEELLKTANIIPAVNQNYLNPSDLQPDVLAANKEHDILNEAYSPFGT
GDLLRNELVAEIAAAHNHSVPQVLLRWSLQHGFLPLPKSVHAEYIKSNTD
IFDFKLTDDEMKKLDGLRGVTHLATDPDTATF
>LSL_1900 Hypothetical dioxygenase/reductase
MNRITEMLGIKYPIIQGAMQDVAKAGLVAAVSNAGGLGVLASGQDTPEQV
REEIRKVKELTDKPFAVNLMFLNKKVPEIVDVVIEEGVKIVTTGAGTPKL
YMPKLKEAGIKVMPVIPNVKIAKKMENLGVDAVIAEGMESGGHIGTMTSQ
TLWPQVVDAVNIPVIAAGGIADNRGVKAAMAMGAEGVQCGTIFSISKESP
VGDNWKKVIIESKDTSIGVIGTKMGVASRTVVNKKAKELYELEDEMTDKL
KFNQLLDEAYQKAVYQDDVEDGIIFAGSVAGMIHESKSAAEIIADLMR
>LSL_1749 Hypothetical membrane spanning protein
MYIDFRKRFMFLVLSLLINATGHALTISTNLGSAVWTASAVNINNCFSIN
SLSLVIFLEGLAVNCLVSLIDKKRKISKFLLDLLFITPFSILVQYFTNCL
EGLNLQHQLLLIRIALDILGIVFISLATSLYQRANIVLHPNDDFMQTIRF
MFLHGDATKAQIIHFLVPLSIIVITTVISHAIWAVGIGTIISFFFQGSMI
KWFDIHAFKHLKHYDI
>LSL_1813 Putative conjugation-related ATPase
MKKKELLELESAGYQLEMISKTQPQGNVKQHSQYLQFGDGYIACLRVYHY
PPHGLPMFWGITLTNTDSTMTMMSIGTEDKDKIKDQLSRSAGEKHSQISG
KAKAADNVDAANTYNDQMNLLKDIIQRNEIIKKVYFRIFVYAQTKEELEK
KIKLFVRKNGQFRMARYADEQLLDFETNLVPTSNQENMINRPSSTPMSAY
SLSGSYPFNHVKLEDPRGSYYGYTSTQGEMIWDPFHRDEKRTRSFFFVTG
NAGMGKSTLLKKINDDVFARGAIIRNFDISNEYKEQTRSQGGVVIRLDKP
DYLINPFEVFATVIDDQGQVDEISSFGQHKEKLKNFFKFLNPDVNSDDLT
MFDTWLTDFYITQNLWIKNPQSYSEPLKITGLPHDMYPTLREFVVYANER
KRQAERDPRIKLTDVDTTSMNRITSTFMNAEAAQGDMLDGITRFPDLSGE
QVVTFDIQGLHAQGEAIFNAQLYSVLTLLSADIIKNGQKLRKQLADGILD
ENLISWYYLNIDEVENIINPKFSFGVEFLASMMEQMRKNFCAITMAAPTI
KDLIMAGSTHDPYILAVQKIFSLFQIRFFFQISDDDIPRLATALGGSTTA
DELQSLTKLQRGHCLMNINGDRNIQFKVDLTADEERRYGGGM
>LSL_1894 Short chain dehydrogenase/reductase family protein
MSENWLNLNEKVYIVTGGSSGIGEAIVKELLNDGAYVYDADLQPAKEEHD
HLTFVETDVTNKEQVDALVARVVEEHGHIDGVVNNAGINLPRLLVDAKES
NSKYELTENDFDKMFNVNVKSVFLMSQAVARQLVKQKSGVIVNMASEAGL
EGSQGQSIYSGTKAAIVGLTRSWAKELGEFNVRVVGVAPGIMEATGLRTP
AYEEALAYTRHKTVEDVRAGYKSKSTTPLGRSGKLSEVADLVAYYLSDRS
SYITGVTTNVAGGKSRG
>LSL_1793 kduD, 2-deoxy-D-gluconate 3-dehydrogenase
MTEWLGLRDKVVVITGAAGGMGTKFSHDFAEQGAKLVLMDIAEERVEKLS
KELADEFKVETLAVVCNSTDEHDVDEAVKKVVDKFGRVDVLVNTAAILRF
SPLEDLTFDEWKQQINININGYFLTSQRFGRQMIKQKKGTMVHISTVASH
FPETYSGAYSTTKAAVNMISKQIAAEWGQFGVRSNCVLPCLVKTPLSKDF
YKDKEVEDGRSRLVASKRIGELKDISNTVLFLASDRSDYTNGDEINVDGG
IGIMMQDMIPKPGGRRQYAIDHHKK
>LSL_1887 ldhD, D-lactate dehydrogenase
MVSIKMFGVRDEERPMAENWAKEHNVNIDMTSDILTSDTIDEVKGFDGLT
LMQVAEVTDDLYPKLKEFGIKQIAQRSAGYDMYNLDAAKENGIIITNVPS
YSPESIAEYTVTTALNLVRKFPLIEKRVKEHNFSWEPEIRGRVVGDMTVA
VIGTGRIGYHVAKIFHGFGAKVVGYDLYPSDKLDGILEYRDSVEDAIRDA
DIISLHMPAFKENHHMFNYEMFKKFKSDAVLVNMARGALIDTEDLLKALD
DGLLAGAGLDVYEHEGPLVPIDLTGKDIEDETFKKVLESDKIIYSPHVAY
YTDEAVRNLVEGGLNATLEVLETGDASTRVN
>LSL_1751 proP, L-rhamnose-proton symport
MASNKKFATWAVSLTNFLDSSCIVAGASGLTLWTSALKLDNFQVGLLGAL
SANAFGSAIGALIGGHLSDKYGRKVIYTYDMLVYMLGTLIVVFSMNFPML
LAGFIITGIAVGAGVPASWTYISETSDEGNRAKNIGISQFSWSMGPVIIF
VAGTLLAPLGLLGNRILFALLTLIAFIAWLLQRGLDESQEWVEQKQKEKE
TGERPHPYKDLFSNAVSVKSVLFLIGVYMFWNLVAGAMGFFMPFVYETVG
GLSNLQANLLQAVLWIFTALAGYFGFAMYGDKVNHRGFYFVGAAMAVISW
LILTYVGMSWTALIAFVVIWGISAGIGAQAWYALWATELFPTKYRAGSQG
VMFFVVRGSAGIWSIFFPLILQNMGFKAAGTFMIGLLVVSLVIGTLWTPK
TRGKSLDEITKERYGDSEK
>LSL_1877 sufB, ABC transporter-associated protein
MISEDIKDIGGQYKYGFKDDIEPIYTTGEGLSEEVVRNISKAKNEPEWML
DIRLAAYEKYKTLKMANFGPDLSELDLDHINYFRRDTDTVARKWEDVPQE
IKDTFDRLGVPEAERKYLAGSSAQYESEVVYHNMKEDFAKKGIIFMDTDS
AVQEYPELVKKYFGKLIPADDNKMAALNTAVWSGGTFIYVPKGVKVETPI
QSYFRINAGNSGQFERTLIIVDEGASVNYVEGCTAPNYSQDSLHAAVVEV
NVLKDAYCRYTTIQNWSNNVYSLETKRARALENATMEWVDGNLGSKVTMK
YPSIYLDGEGAHGNMLSIAFAGKGIDSDTGARMIHNAKNTYSSTVSKSLC
KDGGIADYRGYVRFNRDSDGSFAHVECDTIIMDDESSSDTIPFNEVLNSN
VSMEHEAKVSKISEDQLYYLMSRGISEEKATEMIIMGFVEPFTKELPMEY
AVELNRLIEYQMDGSVG
>LSL_1880 sufD, SufD protein
MKQLSIDELIELRKEPEWFKAKRNEAKQLIETTKLPSFQKIKYHDWNINV
DGTTAIDNQPEFDTNADVYQYASDKAQIKLPQEFLDKGVIVEDFEDALVN
HEDIMKKYFMEKGLKMDDNRLLAEHVANLQSGVLVYVPKNVDLETPLTCE
YIQNSRVEGDYVHHVLIVTEANSSLSYVERLKTDGDKSNTANIVVEVIAG
DGSRIHFASVDNLSKNTTAYMNRRGYLQRDSKIDWAMGMMNSGLTIGDFD
SDLVGDGSHAELKVVGISTSDQIQGIDTRVTNIGKNTIGHILQHGVALDA
SELTFNGIGHVMKRSKGSDAQQESRILMLSPQARGDANPILLIDDNDVTA
GHAASIGRVNPEQLYYLMSRGLQKRLAEKLVIRGFLAPVLDEIPLKEIRN
EFSELIERKVSYDEEN
>LSL_1953 tdh, Ribitol-5-phosphate 2-dehydrogenase
MEEKIISHVYRLTEPHKIEEQDIERNLREGWVDVEPTMASVCHADTRYFA
GNRRPEALKKKLPMALLHEGIGVVKKSNSKKFKEGDRVVVAPNVPGYIYE
GKEKNSCIPDNYNPDSHFLSSGYDGLAQSDIVHPDSCLVKIPDNVPDEIA
IFSEVSTVGYHASSHVKDLLMKPNVKVALFGDGPVGYMAAAAIHFIWGID
SENLVVFGAEKDRLDKIDFAEKRMVTEYDFDNSPEEFDVIFEATGGRFSS
SAINEGIKVIKRTGSFVLMGVTEDLVPIDTRDVLEKGLTLHGTSRSTTSD
FRIVVNALSRNDEYMEALRKLLPKEKTIINNGRDLEDAFENIIANRQWEK
AALKFEW
>LSL_1772 wecD, Acetyltransferase
MIREFQISDTQIVMQLWIAGNEDAHSFIAKEYWQANFEEVEKQLLKADTF
VYDLNGEIKGFIGLMDEYIAGIFVDKAYRSQGIGRQLLEYVKQLHSTLSL
NVYQKNERALRFYRENGFTIVSKQNDEHTGEIEFTMIWNKNKVE