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COG category: Secondary metabolites biosynthesis, transport and catabolism
Gene type: CDS
Genomic element: chromosome 2

Number of genes found: 24

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# Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808

>RSP_3834 conserved hypothetical protein
MGLKLEAAELAAFLAREFPEVADDFEVLSAGEELAMRLKVGPQHLRPGGT
VSGPSMFALADVAMYLAILSRIGPVKLAVTTNISMDFLRKPEAARDLIGT
ARILKLGRVLAVGDVLIRSAGSEAVVARAGLTYSIPPDRAA
>RSP_3468 hypothetical protein
MAELRGLAPGLSVVGYGMWTALGPDGPTTVAGLDARLIVSQSGDLREPLT
GAALPCFRLAAQHWWAGPSFLSEMLLPVLGECAEQLAALPAPLRRPASEV
PVLIAVAPCGRPARPDDLEARLLAELEARLGPLPEGSAVVGAGRVGLPHL
IARAARQAGRHPVQILIGVESFLLQEIVDHYADRHRLLSEENSSGFVPGE
AAAALIVAPRGMAPGLALKGLGAGREPSGAGGSRDAPVTGEGLTDAIRAA
LAAAEIPLFDIPIFLGDLNGEHFKFKEAMIATMRLDRLPPENVSRRPRGH
PEHWNAIEGLGEIGAALMPAQLGWAFEASRSGRLPQGRALAFAGEDDGAR
VAIVAAAAGGPVR
>RSP_3063 AMP-dependent synthetase and ligase
MADALATLFARMAAAEGKTALIEADGTAVSYAALLRRVEEALTRLACEGV
PRGASVQLCGDFGAASVVWLLALWRHGACVSPVAPTSFERRADFAAVARA
SWRIEAADEGLERLGGGSDHPLLDRLRAEGAPGLVIFTSGTTGAPKGAVH
DMRRLLGKFAAPGKDLVTLAFLLFDHIAGIDTLLYALSNGSTLVCLPDRS
VPTVMDRIRRHRVEVLPTAPSFLNLLLLNAGEGLSLPSLRIVTYGAETMP
QALLERLADALPGVQLTQKYGTSELGALRSRSEGGRSLWIRLEGAGTAWR
VVEGRLEIRTATAMLGYLNAPDPFTADGWYRTGDLVEVEGDRLRFLGRAG
DTINVGGQKVLPAEVEGALLALPGVAEAAVHGAPHPILGAVVVARVRMAE
AGLAPAEQRTALRRGLAGRLEPYKIPQKIEIVAEALTTERFKQKRG
>RSP_3539 Hemolysin-type calcium-binding region, RTX
MVGLNLEGTDGADLLIGSRGADVISGRMFNDTLMGGAGNDSLYGNGDDDR
LYVNEGNDSLYGEEGNDWLHGGQGDDLVVGGDGNDTLAGGLGNDTLQGGA
GNDTASYETATEGVTVSLALQGEGQFVNAQEGNDPLTSIENLTGSNHDDT
LIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNL
ARDGQAQIIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADL
ATGGAGNDTILGGAGSDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGF
GDDTLAGGVGDDVVDGGDGIDTVEFQTATAGVTVDLSLQGQAQRISAEEG
TDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGNDTAMGQAGEDLIFGGD
GNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSDTLNGGVGDDVL
VGGQGFDLLTGGTGADTFVFGSLDSADADRITDFEQGVDQIVIADQLMWA
LENAELNLADQIVWNAETGMLSIDLDAGEATRLVDLAQIDHDGTLNITID
DFQFLR
>RSP_3452 TRAP-T family transporter, small (4TMs) inner membrane subunit
MRRGEGPARIPPLRLRDAAPPSPRRPLSSMTSLAPTRFRRTLAVIDGVTD
LGGYLAALCLLGILVLVAAEIFSRNLLAYSIHFSWDLAGYFMGTCFLLAS
GSALKGGSHVRVTALLESMPRAVGRTLEFAACLVGLAICAYLSWALIEMA
WLSAQRGSTAATSFRVPLVYPQAALATGATILTLQCLAQILRLLRGEELS
VGPGLE
>RSP_3169 FAA-hydrolase-family protein
MAAYVLPTAAQAHLDVVGSDEKFPVRRVYCIGKNYVAHIREMNADERDPP
VIFMKPADAVVRNGGEIPYPVFTENFHYECELVVVLKSGGYNISVADAAS
HIYGYAVGLDMTRRDHQKGVLEKGLPWEVTKAFDLSAPIGPVTRAEECGV
LTSGQLTLKVNGEVKQDADIGLMIWKVDEIIAKLSEQHRLQPGDIIMTGT
PAGVGAVVTGDVLDCTMEGLEPMQVRIGPKAV
>RSP_3372 TRAP-T family transporter, periplasmic binding protein
MTAFEKKAAYSRRSFLRTGALAGGAAAGSVLAAPAVLAQAPLVMKMQTSW
PASDIWMDFAREYVTRVEEMSGGRIKVDLLPAGAVVGAFQVMDAVHDGVI
DASHSVSAYWYGKSKAASFFGTGPVFGGSATTMLGWFYQGGGQDLYRELT
QDILGMNIVGFYGFPMPAQPFGWFKTEVNGVADIQGFKYRTVGLAADLLQ
AMGMSVAQLPGGEIVPAMERGVIDAFEFNNPSSDMRFGAQDVAKNYYLSS
YHQASESFEYTFNRDFYEDLDPDLQAILKYAVEAASTSNTALALRQYSAD
LATLAAENGVAVHRTPKDILSGQLEAWDKLIVDLEADEFFKKVLDSQRAW
VEQVSYYELMNAADLGLAYEHHFPGKLKL
>RSP_3607 hypothetical protein
MTLLLGVDTGGTYTDAVIVDPEAERVVGWAKSLTTRADLALGIGRAIDAA
LAEAQVAPEDVGLVSLSTTLATNALVEGQGGRVALIFIGFGPGDLERAGL
PEALAGDPVISLPGGHHHSGAEAAPLDLARLEAEVAAVAPQVAAFAVAAS
FATRNPAHELAARAVVHRVAGCPVTCSHELSARLGGPKRAVTAVLNARLI
GMIGRLIAACEQHLTERRMTAPLMVVRGDGALISARLARERPIETILSGP
AASLVGARWLTGVRDALVSDIGGTTTDVAVLRDGQPEIDPEGALVGGFRT
MVEAVAMRTTGLGGDSEVHPPEGLEGLFRLGPRRLIPVSLLAADHPGPVH
AALDRALLSDAPGEHEGRFLLPTGLPAAGLTGREAQLMERLRPAMPLAEA
LRSRMDLAALERLIARGLVIVAGVTPSDANHVLGRLASWDAAAAEKALTL
MARRRTARGERLAPDARTLAEAILDRLTERTAECLLEVALAEDGYADPAL
LVNHPLLRAGLARRPGALALSARLALPVVGLGASARSFYAGVGERLGCTT
ILPEQGGVANAIGAVAGLVSQRLSLQVTSPGEGRYIVHFPDGPESLPDPE
AALAAAEAHLATRVARLAAEAGAADPRVALTRAVREATVEGRPLFVEATV
TATATGRPRIARDPVFALDASRHIP
>RSP_3530 Oxidoreductase
MSPQYDAIIVGGGHNGLTCGAYLARAGVKVLVVERQPMVGGAAVTGEIAP
GYRSSLASYYQGLLQPKVILDLELQKYGFEVIPAAPTVFALEGGRTFTLW
DDPEKFAAEIAKFSNVDGAAYAGYRAHMLKIAPHMKQLLWEVPVDPASGK
IRDLKRLAGFVWRFRKVGPQFYDIYNLLTMSAWDYLSRWFTSDEVKLVLG
FFAGGGGANSSLKTPGSAYMLARGIVRDGGTAAGPAGFMKGGMGAISEAI
RRSGEAHGMEVRTACPVERILVENGRAVGVRLEGGEEIRSKIVIANATAR
TTFTKLLDPAELPEEFNRDIRNIRCESTVFRVNLALSALPEAPVFGQTNP
QGSIVPQMTVAPNVAYMERAWHQAQGGEIAEAPFLIVKVPSMVDPTLAPE
GHHIMNVFGGHAPYTLARGDWDSRREELWGRVLAVLKTQFPDIESRILHR
QIMTPLDLERIFDLPNGHVHHGEISADQMFFRRPSPQFADYRSPVDRLYQ
ASASVHPGGGVTGVPGHNAAKVILEDRRKWS
>RSP_3440 Putative short chain dehydrogenase
MDLGIRGKTALVLGAGGGLGGAIARSLAREGARVALGDIDLAAAEATAEA
IRAEGGTALPLAWDLADLGAIETNVSLIEAELGPVDILVNNTGGPKPSPI
AGQEAALWRASFESMVLSVISITDRVLPGMKARKWGRIITSTSSGVVAPI
PNLGLSNALRISLVGWSKTLAREVGRDGITANVVLPGRVATKRITFLDEQ
KAAREGRAVAEVAAESVASIPLGRYGQPEEYGDAVAFLASARASYITGST
IRIDGGLIASV
>RSP_3427 conserved hypothetical protein
MRPAYPLPNPDPQPSPGLEPREVFRFYFRNAPEVAADPEIEGRILALADA
MAEASLTQADPEGESSIPAVFTYFGQFIDHDITANTDRDEPGFDIDRAGI
DPQPRDLVEKEKLNLRNGRLNLDSLYGDGPGQSPAAAKMEAAMRDPADPA
KMRLGPVQPVSNGSPGFIRPDLPTDNLADIPRIGAAIDDGSLTLEEAREL
IGEADDAKLRLSALIGDGRNDENLIVAQLHHSFLRLHNALVDKLRADGAA
AGDDALFALARQHTTWIYQWMVVNLFLKAVCDPSVVEDVLEKRAPLYRGF
FEAHKASVPEGALPMPLEFSVAAFRYGHSMVRGDYDYNRSFGVAADGTPQ
TRASFEQLFAFTGGGNMSGFGLTSLPDNWIIEWDRFIRADGPPGRTARKI
DSRLALPLKEMRNPAPGVSGIMRHLAARNLRRGYVFNLPDAQAILSELAY
QGTRIEPLTADEIASGATGAAIRDGGFDSSTPLWFYVLKEAEVRAEGNHL
GPLGSRLVAETLIGLLVTDPSSYLQQGAFGSWTPDEAAQPKGEPITSFAA
MLVACGLLAPVPAAPAAPQPAATF
>RSP_3183 3-hydroxyacyl-CoA dehydrogenase type II
MDLRDQAALVTGAGSGLGEATARALAAAGARVALLDFNLPAAEAVAAEIG
GLAIGCDVASAEGAEAAVARAAAEQGVARILVNCAGVAPAKKMLGRAGVM
PLEEFRRTVEVNLVGSFNLLRLFAAGAAELAPLETGERGVAIHTASVAAW
EGQIGQTAYAASKGGIVGLTLPAARELAPLGIRVCAIAPGIFETAMLKGL
PEAAQESLGAAVPFPSRLGRPAEFAALALHILSNPMLNGETIRLDGALRM
APK
>RSP_3532 AMP-binding enzyme
MWKDEVLAQAVVPYEDRRRRIEAEPLPENIGALIDAAAAEAGDRVVWNFF
ESGETLTYGEMRRKVNGLAARLVALGIGKGTHVGVMLPNVEAFPLTWLAL
GRIGAVMLPINPGYTPREIAHVMKVAEADWVVTHDSTRAVLDEAHAAGLI
ALPAERLIVVGGALGGAHDWAELASEPQDHFTPPEPVGHDDLLNIQFTSG
TSGFPKGCMLGQRYWISAGKVNAFRDGRIYRRILASTPFFYMDPQWLLLM
TLYQRGTLFVAARQSTSRFSGWLEEHEIDFCLLPWVLHGMAPQQHDAQNR
VVRANIYGCPRDLHRGLEERFDLNAREAFGMTEIGPAMFAPIERADKVGS
GSCGVPCPFRECRIVGEDGQPVARGEIGELQIRGPGIMLGYYNNPEATAE
VLKDGWFSSGDLFRQDEDGFFYIVGRKKDMIRRSAENIAAREVETVLAAA
PGVAEVAVVGVPDPLRGEEVKACIRLKEGVVADAAILEGIVATAQAGLAP
FKVPRFYAFVEDFPRTASLKIAKPRITEGVADLRAGSFDRTSGEWIPATE
GASA
>RSP_3602 ABC efflux transporter, ATPase subunit
MSETILALRDARLTLAGNAGPVEILKGISLDVRRGETLGLVGPSGSGKSS
LLMLMGGLERATGGTVTALGQDLTAMDEDQLARFRRGNMGVVFQSFHLIP
TMTALENVAIPLELAGAPDAFDRAEAELRAVGLGPRIDHYPSQMSGGEQQ
RVALARAAAPRPAILLADEPTGNLDGVNGAAIMDLLFGLRDRHGATLVLV
THAPELAARCDRVVRLADGRIAGEERKAA
>RSP_3370 TRAP-T family transporter, DctM (12 TMs) subunit
MTDPQVALLMLGIFISLVFLGFPIAFTLMALGIGFGYYAYFDASRMWRAF
NRLGEEADGWTSASTWVEGFFNNRIFDLFINQTYTVMSNEVLTAIPLFLF
MGYIVERANIVDRLFTTLNIASKNIPGSMGVAALVTCALFATATGIVGAV
VTLMGLLALPAMLKSRYDHAFASGIICAGGTLGILIPPSIMLIVYAASSG
VSIVRLYAAALLPGLTLVGLYLVYIIGRAILQPHVAPRPAPGEVPDVPGG
KLFLMLLTSFFPLAVLILAVLGSILFGLATPTEAASIGALGGMVLAVLYR
AMTFERLRESVYLTVRTTAMVCWLFVGSYTFSAVFSYLGGEQVIADFVGS
LDLTPFQFLILAQIIIFLLGWPLEWSEIIIIFVPIFLPLLRIFDIDPLFF
GVLVALNLQTSFLTPPMAMSAYYLKGIAPAQVRLTQIFAGSLPYVGMVFV
CMALMYLFPQIVFALPEFVYGAR
>RSP_3424 hypothetical protein
MRSSPGIRIAAGCGGAGCARPVDPAGADGSGWASVGEVRAAAGREGGMRS
LIVGASGGIGAALLAACGEGAVGLSRRDHGLDVADEAAVERLLAALDSPF
DRVIVATGALEIGGVAPEKTLRALDPANLARHFALNAIGPALVLKHALRL
LPRDRPVRFAALSARVGSIGDNRLGGWFAYRAAKAALNQIVHTAAIEIAR
SHPQAVVVALHPGTVETGLTARYSATHPVVTPQRAALNLLSTLDALGPEE
SGGFFDATGARIPW
>RSP_3037 Putative short-chain dehydrogenase/reductase
MDLKDRTAFVTAGGAGIGRAGALAMARAGATVVVTDLDASRAEAVAAEIA
AAGGRAEGLGLDVGDDAALEAAILSAAARHGRLDVLHSHAGAQVPGRLDQ
VSVADMDLSWRLNVRAHFVAAKAAMSIMAPRRQGSIIVTSSNSGVQYDRE
MIAYCTTKHAVIAMVRQIAVDYARHNIRCNALCPGFVDTVFNAGFEAQMG
GRAALESYVAETIPMGRFGTPEEIGEAVLYLASDRSAFMTGHALVIDGAE
SL
>RSP_3603 Possible ABC efflux tranporter, fused inner membrane domains
MRNAARIARRELRGGLRGFRVFLACLTLGVAAIAAVGLVRAAIEAGLTDQ
GAVLLGGDAQMEFTYRFATPEEKAWMEARAERVSEVVEFRSMAVVGEDRA
LTQVKGVDGLYPLEGEVELDPPFPLEEALADRGLPGAVMDRVLADRLGLS
VGESFRLGTRNFRLGAVLVREPDSITGGFSFGPRTLVHSSALTSSGLLEP
GTLYETEYRLDLPAGTDLAAAQAEAEAAFRDKGMRWSDSRRASPGVERFV
DRTGSFLVLVGLAGLAVGGVGISAAVRAYLEGKVATIATLRTLGAEGRTI
FLAYLFQIGALTALGVAAGLLLGVLLPLAASPFIEASLPFPVTFGIYPAP
LLEAAFYGILTAFIFTLWPLARAESVRAAALYRGTGEGGRPRWPWLAAIG
GLTALLVGGAVAFSGTALLALASAGGIVGALLILAMAALLLRRAARSAAR
SRLARGRTALRLALASIGGPRQEATSVVLSLGLGLSVLAAVGQIDANLRS
AIERDLPARAPSYFFVDIQQDQIEGFLSTLRGDAAVSRVEAAPMLRGVLT
RINGRPAREVAGEHWVVRGDRGISYAARPDETARVVAGTFWPEDYQGPPQ
VSFAAEEAAEIGLKLGDRLTVNILGRDIEAEITSLREVDFSSAGMGFVMV
MNPAALAGAPHTFIATVYAEPEAEGRILRELATAYPNITAIRVKDAIERV
SEALSAIATATAWAAAATLVTGFVVLIGAAAAGERGRIYEAAVLKTLGAT
RARILASFALRSGLLGGAAGLVAILAGGLAGWAVMTFVMDASYRFEPVSA
LAIVVGGVLATLLAGLLFALRPLRSRPAQVLRAQE
>RSP_3527 Probable acetylpolyamine aminohydrolase
MKTIFSDKHALQSVEREFYRGGWVEAFEIPRRAELVLAAVTRAGLGPVTA
PQPFDLGPVLAVHDAAFVRFLEGAWESWVAEMGPVPAYPNLWPPRRSRTI
PTVRPGAELGRYVVDMSSPVLTGTWEAARAGVDCALTGVALIESGEPAAF
ALSRPPGHHAGRDYFGGYCFLNNAAIAAQQFRSLGAERVAVLDIDYHHGN
GTQDIFYDRGDVLTVSVHADPVQDYPYYIGFADETGEGEGAGANLNLPLP
WGADFASYRSALAEGLARIRAFAPDRLVVSLGVDTFMDDPISQFRLESGD
YPRIGAMIAALGLPTLFVMEGGYAIEAIGENVVQLLKGYEAERG
>RSP_3371 TRAP-T family transporter, small (4 TMs) inner membrane subunit
MRAFIRFADRLSAAFGHAFGWLVVLMTLGVSYEVLVRYAFNAPTPWSLDV
SFIMYGTLFMMGGAYTLSRNGHVRGDFLYRMWKPRTQAAVDLVLYLIFFF
PGITALILSGWKYSARSWGYAEVSVNSPAGIPIYQFKSVMVAAGLLLFIQ
GLAQVCRCLLCLREGYWLSAEQDVEETEAALVRDHGGEAT
>RSP_3322 acoR, acetoin transcriptional regulator, sigma54 specific, AcoR
MEHELSHVREIEAAAEGRPPGRDRVVVESWLRCLNQHRLDPTARSEAFIL
PETALREHRQRSEALIAIARSGIESLYGLVAGQNYVLLLADRAGVTVEYL
GDEAQKQELRRSGLYMGAEWSEARAGTCALGACIETGEPLVIHQSDHFDA
THTGLSCTAAPIYDTLGRLSAVLDISLLSSPRAKASQSLALKLVTAAARR
IEMANLMAENRREWVLRLSASPDFLDVDPEAALSLDGTGRVLGLTHGAAR
ILAQAAGQDWRAAGGLIGRPVSDFLNVRVDRLDDLMRQRPAAERFIETRD
GHRLFAHAIEPRRAPARTVPAPVSLPPPLRGLAGDDPTMAALLRAAAALA
PQRLPILIEGETGTGKLTLARAIHAAGRGGPFTVVRCAEIGEEEALLFGR
QTGRRQEEGLIAAAHRGTLVLDKIEDLPPRTQARLLRLVAEGSYLPVGGL
RPVPVDVRILSTALPGGAEGLRPDLLHRLGGAWLRLPPLRARQDRLWLAE
RLLGSGDRPLSLAPEALAVLASHLWPGNLRELEHMAQTLRALVPGAEVGL
ADLPETIRAGTASGPGVPQAAGAVLAQVLRQTGGNVSEAARRLGVNRSTI
HRQIRRMGVTR
>RSP_3509 expE1, Hemolysin-type calcium-binding region, RTX
MARIKGTARNDILQGTDAWDIIYGGSGNDRIYGGAGNDELKGGFGNDRLW
GGTGRDDLEGGSGDDILSGGAGDDELEGDAGNDRLWGGAGNDELEGGSGA
DRLHGGSGNDRLDGGTGNDVLTGGAGRDVFEFERGDGRDRITDFTNGQDR
LELDDFTRMQVQAVIDDARQVGGNVVLTLSADTQVVLENMKLAQLDMSDF
LF
>RSP_3177 fabB, 3-oxoacyl-(Acyl-carrier-protein) synthase
MRRVVITGIGIVSPIGNNAAEVEASLRAGRSGISFSEDYAHHGFRSQIHG
MPDLVLEDHVDKRDLRFMGAGAAYNFIAMEQAIKDSGLEATEVSNPRTGL
VMGSGGPSTSNFFQAHKIVIEKGSPKRMGPFMVTRCMSSTNSACLATPFK
IKGVNYSITSACSTSAHCIGNGTELIQMGKQDIVFAGGGEELDWTLSCLF
DAMGAMSSKYNDAPETASRPFDATRDGFVIAGGGGVVVLEELEHALARGA
KIYAEVTGYGATSDGADMVAPSGEGGERSMRLALGTLPEGRRVDYINAHG
TSTPAGDVTEVRAIRRIFGEGKVPPISSTKSLTGHSLGATGVHEAIYSIL
MMQGDFIAASANVTQLDPEIQPDEIATTLREGVEIDSVLSNSFGFGGTNA
SLLLSKFNN
>RSP_3062 fabG, 3-oxoacyl-(acyl-carrier-protein) reductase
MSRVIAITGTRKGIGRALAETYLARGWTVVGCSRDASDLTHPAYRHYTLD
VADERAVAGMMQDVRRTHGRLDALLNNAGIASMNHALLTPGSTVERVFAT
NVFGTFLFCREAAKLMGRRRTGRIVNFATVATPLKLEGEAVYAASKAAVV
SLTEVLARELAPMGITVNAVGPTPVPTDLVGAVPEEKMRALIARQAIPRY
GKMEDVLNVCDFFLRDESDFVTGQTIYLGGV