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Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Gene type: CDS
Genomic element: chromosome 2

Number of genes found: 28

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# Vibrio parahaemolyticus RIMD 2210633, O3:K6

>gid:500896  VPA0072  putative N-hydroxyarylamine O-acetyltransferase
MNKTDLNAYLTKLGLPSELPADLESLHKIHVAQHRCLPFENFDISLQRGI
SVEIEDIIQKTVYHSRGGYCFELNGLMLDVLKTLGFEARSLLGRVHVMGT
PTGRSHQITLVTLDEQAWIVDVGFGSNTPRAPLPFILNQVIQTDLQTFRF
VEDAQFGYFLQVLSTDGTDTWNNLYSFDLEFVFAGDIACGNFFTSTSPNS
RFTSARVAAKATESGLVTLLNYTLKYTSQGEQTELELEPGQAYLDALKEY
FGIELDAQYGELRPLPDA
>gid:500901  VPA0077  2-deoxy-D-gluconate 3-dehydrogenase
MILDSFNLEGKVAIVTGCDTGLGQGMALGLAKAGCDIVGVNISEPTETIE
KVEAEGRKFVDIRANLMKLDDIPTIVDRAVTELGRIDILVNNAGIIRRND
AIEFSEQDWDDVMNINVKSVFFMSQAVAKQFIAQGEGGKIINIASMLSFQ
GGIRVPSYTASKSGVMGVTRLMANEWASHGINVNAIAPGYMATNNTAALR
ADEQRNKEIVDRIPAARWGTPEDLAGPCVFLASKAADYINGYTIAVDGGW
LAR
>gid:500949  VPA0125  oxidoreductase, short-chain dehydrogenase/reductase family
MNKVVIVTGASRGIGAATAKKLAEQGYRVCVNYRTQQEAADQVVAEIQAN
GGKAIAIAADVADEQQVLSLFNETEREFGAVTHLVNNVGVLFTQSPLADI
SLERFQTVMNTNVVSCFLCCREAAKRFSAGGAIVNVSSGASRSGAPFEYV
DYATSKGAMDTLTKGLSLELAERNIRVNGVRPGFIYTDMHADGGEPNRVD
RLSPQIPLKRGGTVEEVANAIAWLLSDEASYVTGSFIDIAGGR
>gid:501038  VPA0205  putative C-factor
MNILIVGGNGGIGLAMVKEALVRFPQAQIHATYRRTKSDYEHSALIWHQV
DVTDETQVKNLSQAVNSIDWVINCVGMLHTPNKGPEKNLRMVEPDFFLQN
IAVNTLPSMLLAKYFTPLLKCSGAPKFAVVSAKVGSISDNHLGGWYSYRA
SKAALNMFLKTMSIEWQRTLKNGVVLALHPGTTDTALSEPFQANVPEGKL
FTPERVASDLMGQIVKAAPQDSGAFLTYDGERLPW
>gid:501140  VPA0307  putative pyrazinamidase/nicotinamidase
MTVRVNYQTTAVIDVDPEKGFSELCPDELPVAGALDIVPELLKNHAKGRL
KLVSRDLHPPKAAWDAETPANMLEPVGLPNVDVKWNRHCVLGTTGVELLD
GLPPVLDYDFQVNKGMDPDAHPYGIFFHDVADTKTTGANEFLKCNKIDTV
VVGGLALDFCVKKSVMQALDLGFKVIVNLAATRAVLPDTVDSVIAEMKEK
GALFVKNADDIIVERFA
>gid:501146  VPA0313  hypothetical protein
MEDFYLNSRGLAGYFEAQWFDKFVEDKQVDAITSESKLVPLSFAKSSHCS
QVADFITQAVSKNGKPPHALLGVGAALGRNYYELVQRLDSLKQATLVEPS
GMLLNGLKQLLVEEQQVELTYIHGLNTLKTVEVDNRELVQNCAHVDLELI
NQPLEKDTVSKFYDLVVCLNVLDQCESPLRVINALKQATQIGGVLVVSCT
YQWNAKHIKDRAEAVDDIKAYFGEDWRFVSEAEHEYRMRFNERYAMQFLS
HVVAYVRTT
>gid:501173  VPA0340  putative tellurite resistance protein-related protein
MSVSWDPYYQKVAQQPHRVNVEKALQFHTLAKKIAVDAGCGTGRDSSFLL
AQGFRVHAFDNNSDAIKTCETRFSEQPNFSISQACFSDFDYPKCTLFIAS
ASLFFCPKAHFENVWNQIDSSLPSGGVFCGDFLGVNDSWVDSNSHAHLTS
LTRQQVEQCFEGYDIVSMHERDEDGTTIVGTPKHWHVFSVTAVKC
>gid:501215  VPA0382  putative sorbitol-6-phosphate 2-dehydrogenase
MELINKTAIVTGAAGGIGRAIIHKLLEQGAKVLAVDISPQSLNVYQDFDA
EQLRTFVADVTEYQEVEAMVKHAAEQFGSLDIMINNAGIGAPKPLLDHDP
IADFEPISKVNQNGVYYGILAAGRQFQAQGTPGVILNTSSVYARMASEMT
FTYNVSKAAVDMMTKCAALELAPLGIRVCAVAPGRVDTPMLRQYDEIGLW
NHIRKEQMRQTFTQPEEIANVVTFLVSEKANCINGCTVSASDGFENFKYP
LMG
>gid:501361  VPA0528  conserved hypothetical protein
MSVIQVEEKKVEVGKVLCVGRNYVEHIHELDNAIPEQMVVFNKPSTSVST
ILRSFHQEPLHYEAEICFLIKDGQYAAVGLGLDLTKRGLQSSLKKQGLPW
ERAKAFDGSAVFSRFVPLEGIDIHDLNLELLINCVRVQKGHVQQMLYPPF
AILDELSSYTTLQDGDVVMTGTPQGVGEVHQGDVFLGRLKCGDVTLLEIE
WVAD
>gid:501400  VPA0567  sigma cross-reacting protein 27A
MKKVAVILSGSGVYDGSELHEAVLALHAIEKAGATWHCFAPNIDQLHVIN
HLTGEEMDEPRNVLVEAARIARGNIEDVARLNVEDFDALLLPGGFGAAKN
LTDFAVSGAECSINTHVAQACRAFANANKPAGYLCIAPVIIPMIYEHGVK
GTIGNDDATAAAFHQMGGEHVECNVDEYVFDEKHNVLSTPAYMLAQNISQ
AASGIDKLVSKLVEIA
>gid:501407  VPA0574  putative methyltransferase
MEATMAQDWDGLAKNWESNPATEQFAQSVFAQLQQLTQLDGIKVLDFGCG
TGQLSQLLSPLVKDIVALDASEAMIEELDKKELLNVEPVVDALSRGLVAQ
HPAFRGQFDLVVASSVLAFVDDVESSLDIAHSLLNEGGYFVHFDWVAESE
QDGFTLSRSENALSNAGFVDVEAKKVFDITSDGQIMSVLMGVGRR
>gid:501460  VPA0626  putative short-chain dehydrogenase
MAITLAQSGADLALLDVNETGLRETQSQCQMLSAKAFTYPVDVTNESDVE
ATFDAILQDFGQLNGLINNAGVLRDGLLVKAKDGVINKMSLEQFNLVMNV
NVTGTFLCGREAAVKMIESGSQGVIINISSVARAGNIGQTNYSASKAAVA
TMATTWARELARYGIRAAAIAPGVVHTAMADQMKPEAIERLEKMIPVGRM
GEASEIAHAVKYILESDYFTGRVLEVDGGIRM
>gid:501474  VPA0640  putative protocatechuate 3,4-dioxygenase beta chain protein
MERRHFLALWTLMFAPFLKAESSMRPTPSQTEGPFYPVVKIPLRQNLILK
PDALIGKAITLQGKVLDVFGRPISGVKIEIWQCDGQGIYDHPNQPSQNKF
DPSFSGFGATVTEEDGRYFFQTLFPVPYSSRPPHIHVKLWRGDQELLTTQ
LYLKGQTGNEWWGGKARDHLQFELINIDGRIVGTFDFVIV
>gid:501482  VPA0648  putative DOPA-dioxygenase-related protein
MYHVHVYFPLQQLEKAQALNEIIRQERQDVLRVYPLVDRLVGPHKMPMFE
MHLESISEEFLAWLDTIRGDFSVLIHPVSERELRDHTESAIWLGRELGVF
EEKLEN
>gid:501609  VPA0775  hypothetical protein
MSANSHFHSTHESHYQCAVCSSIDANPNSLAVNYQCLADSSVVGEFHVLP
RHQGYTDLLHGGIASSLLDGAMTHCLLFRDIQALTAQLDVRYHAPIELDE
HVTITAHCEGERRGIYQLVAQLLVNNEVRVTAKGKFIRPKEA
>gid:501697  VPA0862  conserved hypothetical protein
MSIWKKPISLDILNATSRNTMMEHLQIEYTNFTDDSLSATMPVCSFTHQP
LGMLHGGASVVLAETLGSIAANFCVSEGNYCVGLDINANHVRAMRSGYVI
GTAKPIHLGVSTQVWQIEITDERDRLVCTSRLTIAVKQQKAKLA
>gid:501707  VPA0871  ABC transporter, ATP-binding protein
MQTPVLKAPIVQANLVSKQVSTNQEQLTILKDVNVDIRKGETIAIVGTSG
AGKSTLMTLLAGLDTPTSGEITLLGHELSKLDDEARAKIRADSLGFVFQS
FLLIPSLSALRNVTLPCLLRGEAEDEARATELLSAVGLEKRLDHLPSQLS
GGEQQRVALARAFMTQPELLFADEPTGNLDHQTADKVIELLFDLNSQHGT
TLILVTHDVNLASRCDRIYRMEAGELKEEM
>gid:501708  VPA0873  putative permease
MVRWSLGEIRQGNLWPISVALVLVIASIFALSALASRMEQVIVKQGKDAL
TADAVFVSANPLSDSLLKSTEQLERSVMTRFSTMAFSDNGMQLISVRGVD
ESYPLMGELVLDGNESGRVKPNQLWLDERIMAQLEVTKGDNVTIGDADFT
VSGAVLMEPGLSFNPFQQMPAAYIHQSDVEKTGAIQVGSRVQYRLFLKAD
NAALKQLQDKTELSPSDRWRTQDTASRSNEVFDRTTQYLSLTVAIVIIMA
ATTLVLTCQNYVNSRTQTIAMLKSLGASRRWIEKWVLIQVAILLVTASIV
GLILGSGLEYLLRIPLKDLLPNPLPSYGVTPFIVAVVSAILITVPALGIP
LLGLIKTPALEVLQQGTAQRSWKRLLLVLVPVLPLLALYANNTLVWIVLV
GIAALFVVLAGLSIALTKLFSRFATKPAMKLALSRINRTPITSGLQFGAL
SLSLMLLSIIWLVRSDILADWERTLPADAPNVFALNIADYELANYLETLD
KNGVTRSQAFPIIRGRLTEINGQNVKDVEYEGEGSDAIRRELNLTWGDQL
PEYNDVLSGKWMNANSVSVEADVARDLGIQLGDKLRFVINSQNFDATVDT
IRHVEWRDMKPNFYFIFSSDVMANVPGSYLISYRINEGNESLLTSMSRAH
PTVSVLDIRTMGEKIQALIQQIVSAITILALLGVVAGLLLIFTLLRLSLS
QRQQEIRLYRTLGSSKKRINTTLWAEYGIMALVASSVAVMAAEACVAAVM
KYGFDLNAQIHPELWIALPLATFVTLALVVMSLLKRLLTPVNT
>gid:501787  VPA0951  hypothetical protein
MIADGGESNTYIRLVRFDGDTSTHSWLTLSEVELMTRPPEMNGRDSNDLS
FQNEVSEYVRNWCDVEYGTNTDYDKALEAVMEPGEASNAVYPWQDGWDYF
GPEKPSESKDTIFFISDGEPNPSEGAVTSPDLTERWEDYKQTHDAKVYGI
GIALSDNVKAAEALDELSDKVVFIDSGEDLGQYLNQFSPDPIAGELLAGS
QDADGDSMTISLAEGDFTLLSADLHGVTVNQPLVSSTSDVDGQLHIQTAF
GTLEVSSNGSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLT
LNDSGTDIAQTERHASVGDEFANSITGGESIDILLGQAGEDTLSGGAGDD
ILVGGLGNDILTGGLGSDILTGGEGIDTFTFTQESLDMTSSRDVIKDFRL
DEDKLDLSDILEFFGDDTTDMDNLLEHVSADYDSAQDTLNLTITGEGSNT
MSVALENFDLSGLELGSSATSHEIVDQLFHHQVFSVD
>gid:501903  VPA1061  putative enzyme
MRTWIMLKHTTSSEKAAHPIPQEAFDWYDEYAHGKISRREFINRLGGLAV
LGFSMTALVDALTPNYALAEQVSFNDPEIKATYETFSSPNGHGEGRGYLV
MPQKKTIKSPTVLVIHENRGLNPYIKDVARRLAKDGFIAFAPDALYPLGG
YPGNDDEGRAMQKEMDRAKIEQDFIAAAKFIKQHEHGNGKLGAVGFCFGG
YVVNMLAAVMPNELDAGVPFYGTPAAEEIQKQVKGPLMLHFAGLDKRVND
TWPSYEQQLIASGAKYQALMYENVNHGFHNDSTARYAPEEAALAWERTLA
FFKEHLIAS
>gid:501960  VPA1117  putative short-chain dehydrogenase
MELANKVIAITGAGQGLGKQMALSLAQSGVHLALIDLNSDQLAETKAECE
SLGVTARFYVANVTDELQVCTAFAQVEADFKQLNGVINNAGIMRDGMFIK
VKDGQVNAMSLEQFQSVLDVNVTGTFLCGREASKVMLNTDSKGVLINISS
VARAGNIGQTNYSASKAAVATMATVWAKELGRFGIRSVAIAPGVIKTAMT
DQIKPEAMERLVNMIPVGRLGLADEISSTIKYVLTNEFVTGRVLEVDGGM
RM
>gid:501989  VPA1146  hypothetical protein
MKSKDSPIINEQFWDALFFNGTMPWDRSQTPNELKHYLKRIADKTHSVFI
PGCGAAYEVSHFVDCGHDVIAMDYSAEAVNLAKSQLGQHQDKVMLGDVFN
ADFSREFDVIYERAFLAALPREIWGDYFAMIERLLPSNGLLVGYFVISDD
YRSRFPPFCLRSGEIEQKLEANFHLIESTPVTDSVDVFKGKEQWMVWQKK
>gid:502048  VPA1205  acetoacetyl-CoA reductase
MKKVALITGSKGGIGSAISSQLVNDGYRVIATYFTGNYECALEWFNSKGF
TKDQVRLFELDVTNTAECAEKLAQLLEEEGTIDVVVNNAGITRDGVFKKM
TAQAWNDVINTNLNSLFNVTQPLFAAMCEKGGGRVINISSVNGLKGQFGQ
ANYSAAKAGMIGFSKALAYEGARSGVTVNVIAPGYTGTPMVEQMKPEVLE
SITNQIPMKRLATPEEIAASVSFLVSDAGAYITGETLSVNGGLYMH
>gid:502056  VPA1213  hypothetical protein
MKWLDRLKIANYHRKRYKQFGNDKARTLGWQDEYSQISRFEALTRSLCLE
AVSILDIGCGFGDLLEYIESQNQYPARYVGIDLQKQFITKARKKAFKTPV
NFICGDFSKLVLPQSDYVFASGSLNYKSSNANHTIEMIEKMYRAARIGCV
FNLLDEEKLPSMRMLESHNKVGVLRYCRWLCPDAQLIEGYSDHDFTIVMI
KKAEPVS
>gid:502149  VPA1304  putative 3-oxoacyl-(acyl carrier protein) reductase
MKSEKVAVVTGAARGIGQAICEQLLEDGFHVVGLDISPVEWSHSAQLSSY
QVNLCDAAAVSEVVDSIVEQHGRIDALVNNAGITRDALLPDMLEQDWDSV
IDVNLKAVFLLTQRVAPVMLEQGTGSIVSISSIVGTDGNIGQSNYGASKG
GVIAMSKGWAKELSRKGAQIRVNCVAPGFITTDMTKNLPEKVIQMMESKT
PLGRMGSVQDIANGVAFLVSDKSAFITGQVLKIDGGLVL
>gid:502296  VPA1445  putative secreted calcium-binding protein
MSTSDNDTYLGDAGANNNIADFDGGDDLFIGYGGNDSFVGGGGDDYIIGG
AGNDRLTGGAGDDVLRAGTGNDYLGGGTGNDLLLGLLGDNKLNGGVGEDI
LVAGSGDNVLVGGSDSDKFVFTDKFGGHGEAKVVDFTIGEDSLHIISDTV
TEFGDLTFSYDAAGNAVFTDGADLTVKLIGVTETDINTYGADLFVI
>gid:502510  VPA1659  hypothetical protein
MNHNALYLTQRLIDTCLREDMFGILSNAKFSSAAPKGVIVPQLEQVWLTF
DNPDFTLYLPVVPTYYMQHWCYGQANGEAPLGWWVEKNGQVEHQQHYQEW
IALLTTLAHESSHELLAGYLQELECAEKHKALCDQAFRHHADHISQPISE
LGSWHKKLLLADQIASYLDHPYYPTARAKFGLSDEDLAKYAPEFAQSFAL
HWIAIEKSLVTLTSEQPDCWPTMEQVGFPADFALSHVLFPAHPLTLRSLE
TLPEGMIEAPFTYLDVTPTLSVRTVVVNDAPHIHIKVPLIMRSLGTKNIR
LIKPSTLYDGHWFERLLSHLEQTDADLNSRLFHCNEKHGGHVGEDKTFAY
IVREYPLSHCEDKALVPVAALASPMPDDRLFLEHLAEQYYQQDTLAWFQD
YVDLLCQVHLTLWLRYGIALESNQQNAIVAFDQQGKMTLAMKDNDAARIW
PERFNFATEHAAQKHGAGTTPVNCDELLDQRIKVDNELALGQMFTTITLQ
LDIAAIVEAMAAKGIASSASLYAIVAKSIAEQLNRLEGEGLETKLARELL
QEAPDLYAKYLLSSGSLLSKEASGASDINKFYGLSAPNFLLLSSEEAQRA
YLEAIKKSVR
>gid:502512  VPA1661  putative AcsD
MLQTQSSQTSELRAHDVQLNREKAQLNTIMGVLNCYLREFALPNQQVEWH
YQSTSLPQTLKRNYSAKQRVAVHLSQQNGVLVLPIHYASKLGKIKLAELP
WAKMPGSGWAKLDATQTLTLLLNYLKQVLAIPFNHELIEQLENSVLVTEQ
FLNVAPKSHHNEFIASEQSLIWGHTFHPTPKSRSGVTMDDLLAFSPEVGA
QVPLYWFEVDTSLLDVLSSDGEANPAQRMLQQLAPQHTTSNGKTLYPCHP
WESYTILSNPSVRRAIEQGKITPLGLGGEKMQPTSSVRTLYHPDMDWFAK
FSINVRLTNCVRKNAWYELDSAVQLTSILKPIRENEQLHNPVFKVMTEPY
ATTLNLESVAERNWDDNTKARESFGILYRENFSLSEVDILKPTLAGALFA
YDKNGNSCIAQRLKNKARTTQNRYSDIATLWFERYLHCLIPGVFNYYFKH
GVAFEPHLQNTLIGFEQEMPCCVWIRDLEGTKLLPEFWPAETLTDLSERA
RQSVYYSREQGWNRIGYCTFINNISEAIFFIAEGDEPLEQTLWNAVQSAI
VRWQSVNGKQPELEALLNGGHFPSKNNFTTRLMQKADKESGYTQVAAPWQ
QHEKGAQHA