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# Treponema pallidum subsp. pallidum str. Nichols, Nichols

>gid:10402  TP0016  ATP-dependent protease LA (lon-1)
MLGNLMLGPYCRSSLWRELSWQEVTGIVAPDTIAYLKARAQDHPFLLAHE
RACAAIRLGMRMYGDGYNICVIGASGTGKRTTLQYLLKDFVPRPEQMWDI
AYAYNFVHPHEPQVLQFPAGEGMPFATALRRSVNAILNTAQDIVKSDAFL
RERRTLLADIETRECAELSRIEAELYTRGFRVRWHRKRGTYSFDLVPLLK
GKDSSFEALHDLASRAKLSRCVVHELHARYRLSCDEVSSLLHTLRTARRA
ARRRLAQYYRARLRLIILEQMACIKKRVACYAPVFSPPPVSCAAEQTERE
KTSSSRLIEVPHEFEEMRARIISYIERIQTDVQVRVQCLMSMRISALVKK
RFFDRYTLNFVCVHTEHAGYVFTEHQPNLANLCGSIESKGNEGDTLENGH
LRIRAGALHRAHAGVLIVQLEDLLAEEEAWTHLKRALRTKQVLLPAGSSQ
SQGMLRPEGVPLTCKLVLVGEPCSFERLSQEDSSFRELFKVCAEFDTSMP
NSDKNQVALIAYLDRVVARYGTFSLDSSAYARLLAYAEELAESHTRLSTS
FVQIADLVLESHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQR
MIACGELLVEVQGYRIGRINALAIEEHCGHSFGIVISLTAQASAGKEGVM
NIEREAGLSGEIYDKAHLIITSLLREKCLSAFADAAFDPAVDDLGKGQDS
FPLCLSAALCFEQSYHGIDGDSASAAEFLVLLSAIGRFPLRQDRAITGSV
NQLGQVQAIGGVSEKISGFYDVCALNGLTGMQGVLIPKSSCAQLFLPERV
QDAVRAGTFHVWAVCTIDDALELMVPDDLKEQGSAQLYQCVRARLRDFYV
TVKGHCE
>gid:10421  TP0030  heat shock protein (groEL)
MAKQLLFNEEARKKLLSGVEQISSAVKVTLGPKGRNVLLEKGYGAPTVTK
DGVSVAKEVELEDPFENMGAQLLKEVATKTNDVAGDGTTTATVLAYSMVR
EGLKAVAAGMTPLELKRGMDKAVAIAVDDIKQNSKGIKSNEEVAHVASVS
ANNDKEIGRILASAIEKVGNDGVIDVDEAQTMETVTEFVEGMQFDRGYIS
SYFVTDRDRMETVYENPYILIYDKSISTMKDLLPLLEKIAQTGRPLLIIA
EDVEGEALATLVVNSLRGTLKTCAVKAPGFGDRRKEMLEDIAILSGGQVI
SEDLGLKLESADIALLGQAKSVKVDKENTTIIDGSGKSKDIKDRIEQIKK
QIEASTSDYDSEKLKERLAKLSGGVAVIKIGAVTEVEMKEKKHRVEDALN
ATRAAIEEGIVAGGGLALIQAAAALEKADLSGLTPDEAVGFKIVRRALEE
PIRQISENAGIDGAVVAEKAKEKRGIGFDASKMEWVDMIKVGIIDPAKVT
RSALQNAASVSGLLLTTECAIAAIPEKSSSTPPAPDMGGMGGMY
>gid:10462  TP0071  ATP-dependent Clp protease subunit B (clpB)
MNTDRYTVKASEALNDAISLAEAENHGQVEEEHLLHALLSQKDGIISPLI
EKIGAKPDFLYDELLQCLRRKPRVTGPAAQTRCAPTLSKACARAERLALK
NQDEYVSCEHLLLAISETDSNTARLLHSQGITSKTISAALKDIRGSKRVT
SQDPESTFQCLEKYCRDLTTLAREEKIDPVIGRDEEIRRVMQVLSRRTKN
NPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKGKRLLSLDLGALVAGAK
FRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLK
PALARGELRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIAIL
RGLQEKYEVHHGVRIKDEALVAATVLSDRYITNRFLPDKAIDLVDEAASR
LKMEIESQPVELDQVERKILQLNIEKASLLKESDPASKERLEKLEKELAG
FLERRAAMQVQWQNEKGRIEESRRYKEELERLRIEETMFSREGDLNKAAE
LRYGKIPELEKKIMLLTAEVEKKSGLEGQLLREEVCEEDIAKIISMWTGI
PVSKMMASEQQKYLQLESVLMQRVVGQDEAVRVISDAIRRNKAGLSDTRR
PLGSFLCVGPTGVGKTELARTLADFLFNDERALTRIDMSEYMEKHAISRL
IGAPPGYVGYDEGGQLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDD
GRLTDGQGRVVDFRNTIIIMTSNIGSEHILSARESRTHTSDLPVPETQST
EEQTLPEQIRGLLHTYFRPEFLNRIDEVLIFKRLTRKHIRLITDIQLQMV
VERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALARE
ILSGRFRGGSTIVVDMCKDALCFTEQTS
>gid:10463  TP0072  conserved hypothetical protein
MEKTLTLFGSNHCGQCATALEYLRSNHINFEYVDITGSGKNLKRFLKMRD
SMPLFDDVKKEGRIGIPCLSVNDGEQVFLGVEGLDLSAFR
>gid:10489  TP0098  heat-shock protein, putative
MSERTVPDHYAILGVAADASEEHIKKAFRAQALKYHPDKNPGDACAEDQF
KRINAAYAVLSDRASRARYDAERAGGAFWSSRAGRDASEGFGAWTSRYGR
QGRSAHPLHTHARSLERARAGNRTLRGMVHFLRWFSWKWVELLEQCRRSA
RSGGSYRAHGLQERRGAPSHSGSGARPPGSIRATLLFSIWLLRDRIQRVL
PGARSAHPEGRTLNPP
>gid:10491  TP0100  thioredoxin, putative
MSCSRTTGALRAVPLVFRSVLVLAVWGVSCVQAADVAHNADVPSRSLKAL
ERFRFFVYPKPLDLSSDFHAKALKGEALVPSLFKGKVTLLNFWATWCPPC
RAEMPSMDRMQALMRGNDFQIVAVNVGDSRKQVESFIARGKHTFPIYLDE
EGSLGSVFASRGLPTTYVVDKAGRIVAVVVGSVEYDQPELVALFKELARD
>gid:10492  TP0101  cytochrome c biogenesis protein (ccdA)
MTSVPGVVGSFLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQ
VFLSSVFFVLGLTTVFVLFSIVFSGGVQLAGAGVLTVLTRVAGVGVILLG
LNTIFDVVPFLRVERRMHTTVRRVGVFRAYLFGLLFATGWTPCVGPILSS
LLFYAASSGQLLHAAGLLTVYALGLGLPFVFAGIFFGRAERVFAWVKSHM
HAVKLASGMLIVFFGLLMLTSGLQALSRLFLRAGFALEEYSTRGITPLRQ
IAALLAQWFLYQGV
>gid:10507  TP0113  Lambda CII stability-governing protein (hflK)
MRIPKWTPATWSVVAGCIGGVLGIVIVGIASPIRIISPTDNGVVTRFGKY
HRTLEPGLHYLIPFVEWVYKVPVTKVQKEEFGFRTSKSSEQSHYVNNISH
ESLMLTGDLNIVDVEWVVQYRIVDPRAWVFNVESQERRQTIRDISKAVVN
SLIGDRAILDIMGPERSAIQMRAKDMMNVLLKRIGLGVLVSSVQLQNVVP
PQEVQQAFEDVNIAIQDMNRLINEGKESYNREIPKARGDADKLIQEAMGY
ANERVNRAKGDVARFDSIYAEYVKAPHVTKTRLYLEGLGAILEKTENVLL
IDKKLENLLTLKDISKVSKKVVAGTREE
>gid:10508  TP0114  Lambda CII stability-governing protein (hflC)
MRKRGLQVHARVRPVLNIGIVVGVLLGGVVLLQPFYLIQEGQVALITQFG
EIIKTNNTAGLYVRAPFLHHVHKYTAKLLRVDGDPQKIPTKEKQFIEVDT
TSRWRIEDVKKFYQSLGTYEAAYSRISDIIDSSVRDIITVNGLDDVVRST
NAINESNHSEQFDVPVSQLAFDRGAEKTAHMTIEKGRESLAREISQAAND
QLKDFGIVVVDVIFKGIKYSDELQASVFNRMVKERNQIAQMFRSTGEGKK
AEWLGKLDNEKRSLLSKAYEEAERIKGEADARAAAVYAQSYGKSPEFYGF
WKSLEVYKKSLPDTEKILSTDLEYFKHLYQH
>gid:10580  TP0184  small protein (smpB)
MEDRLECGIALEGTEVKSVRAGHLSFPDAFAEMRGGELWLKNVHIAEYVH
ACSFAPNPDRMRKLLAHRDQIARLKRKVEEKGYTLVPLEFYLKAGRVKVA
LGICKGKKLFDKRAQIKARDNARELSRSLCERHH
>gid:10611  TP0215  grpE protein (grpE)
MCGGDVQGQGVASGCDEALERADSLRASDPVPVESGEGSVPGEHSQELET
GASEETLRERVNVLQEQYLRKAADLENYRKRALRERQEAVEHAYAALLAD
IVAVLDDFDRAIEAADHASSTEVEASSAFREGVLMIRKQLSSVLETKYGL
EYYPVLGERFDPNLHEALSMSPSASVHEKIVGAELQKGYRVRNRILRHAK
VMVLTPEEQTEPDRGDGPSE
>gid:10612  TP0216  heat shock protein 70 (dnaK)
MGKIIGIDLGTTNSCVAIMEGGEPVVIQNAEGGRTTPSIIGFTSDGGRVV
GQPAKNQMVTNPEHTIYSIKRFIGSRFNELTGEAKKVPYKIVPQGDDVRV
EVEGKLYSTQEISAFILQKMKKTAEDYLGEAVTEAVITVPAYFNDAQRQA
TKDAGKIAGLDVKRIINEPTAASLAFGFNKDSKREKIIAVYDLGGGTFDI
SILELGDGVFEVKSTNGDTHLGGDDFDARIVQWLEQGFKSDTGIDLGNDR
MALQRLREAAEKAKIALSSSASTEINLPFITADANGPKHLQRTLSRSEFE
KMTDDLFERTKEPCRKALKDAGISADRIDEILLVGGSTRMPKVAHVIKDV
FGKEGSKGVNPDEAVAIGAAIQGGILGGDVKDVLLLDVTPLSLGIETMGG
VFTPLISRNTTIPTRKSQVFSTAADGQTAVSIHVLQGERGMANQNRTLGN
FDLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQHIRIESSSG
LSESEIDRMVKEAEANAESDKREREKIEARNVADSLIYQTEKTLKEAGDG
VNAADRARIDEAIAELKTVLSGDDVASIKAKTEILQQASYKIAEEMYKRQ
AAAGAAAGKKSDAPSGNEAEGGDVDYEVVKDEDSK
>gid:10735  TP0330  cell division protein, putative
MHSGQQLLEKNSIIISGLPPWAQELSKKYCSKTVNLYFVHGNIRDFLPHR
DIQGSFSFVRINDYISEVIFGNRDIIVFYDKSAGLTFCLQEMLSAYLERM
HAQYPTEALADFLSRDPVKAFAYLERYFIMNMKQNKRMVLIIDYSESLVP
SEDIANLSETDRYCFVTLNRWANDPVFTNEDISVVMLTENITDINSRFTA
SPSTVKIHIPLPNEETRIRFLEYLKTQEEILVLERGLNTEKIGKLTSGLN
LVNLHQLAAETYQTIDANGKPEDNISRLSHTDSATLQFLKRKKQEIIEHE
AGGLLEFVDTSCDLSYVAGNVFVKKRLYNAVRAIKQGRADVLPMGYLISG
PIGTGKSFMVSAFAGEIGIPMVRLCNFQATQPGITQSNLEKTLNILKALT
PVAVMVDEADAVFGRRNAPAGESRIFAQIAGFMGNTQHRGNIIWFLITSR
PDLLPIDLKRQGRAEEHLALFYPETTKEKTEIFEALKKKLRIKLKDVHVP
AIIRRIKFAVSGSDLEAILVRAQLTAAMENRTMVTTQDITRTIEDFIPPA
YPHEIELQNLVAVLECTGKEMLPARYQHLDRSKLVADIRELKLLMGEK
>gid:10755  TP0349  peptidyl-prolyl cis-trans isomerase, FKBP-type (slyD)
MKIANECVVNIEYTLRDDTGEIIDSSDVMGALEYVQGHGMIIPGLETALI
NREEGEEFSVTIPPVGAYGEVQEDLRMTVGRDQFPPNVPIEVGMRFDAGS
GGDSRPVTVTDVQGETIIVDGNHPLAGKTLHFEVAVRSVREATDDDLAAL
LFRESTSGGGCGSGAGGCGSCGAGCH
>gid:10918  TP0506  trigger factor (tig)
MELQKKFTALAQSQVELEVVVAREDAQRHYQRFVEEYLERARLPGFRKGK
VPLAVLERKYGSAIRQDAAAALMEKALEEGFAQASQDSQPLPISRPSLKK
KPVFDPDEDFSFAVIYDVFPSVELRNTSGFSLSVPTVSVTEEDVSRELTR
IQERNALVTDKGADSCAEVGDIATVDYHEVDDSGAVRPGTERAGVVFTLG
VEEGPFALGQDILGMKLGQRCLFAKRAGMLKDEAAQVRVTLKALKQRQLP
SLDDELAQDVSDAFRTLDDLTRSVRQNLAEALEAALHEYKRRQLLRILVR
ENPFSLPESLVVGEMESRWALVMRQFGVSLSGTPQNKLQFFQQWRPEVEE
HLKQRVIVELLLKQEQVSVSAEEIETEYVRIASKTGSKEERVREYYAGEE
KRRALCEGIRERKLCQKLLGRCVTECGPEQSLTDFLQEQSRA
>gid:10919  TP0507  ATP-dependent Clp protease proteolytic component (clpP-1)
MRERMHNLVPYVIEQSGGGERSYDIFSRLLKDRIIFVDGEITDAVADLVV
AQLLFLESQNPDKDISLYINSPGGAVTAGLAVYDTMQHICPEVQTICLGQ
ASSMAAVLLAGGAPGKRFALPSSRVMIHQPWGGVQGQASDVCIQAQEILR
LKTLTIAYFALHTGQSEEQVREDMERDFFLSAEQACSYGIVDTVMKRRKH
AQV
>gid:10920  TP0508  ATP-dependent Clp protease subunit X (clpX)
MLRSKGDLVLGCSFCGKKEDERRRIVTGHGVSICNYCVERCAEYLRDRKP
SALALMTKEEIPTPLELKAYLDQYVIGQDLAKRVLSVAVYNHYKRVAGRS
LDIDSVLIEKSNVLLIGPTGSGKTLLAKTLSQKMKVPFAIADATTLTEAG
YVGEDVENILLKLVQNANGDVALAERGIIFIDEIDKISRKSENVSITRDV
SGEGVQQALLKIIEGTIASVPPQGGRKHPNQDMLRVDTSNILFICGGAFV
GLDGIVGTRVCKNPVGFGADVKTVKERGLQLMHEDVIPDDLVKFGLIPEI
IGRLPVTVALDALSKEDLRNILVRPRNAIVRQFEALFALDDVRLVFDEDA
LDAIAQQAIDQKTGARGLRSIVERLMLDAMFEAPSLKGKKELCITKKVVT
QEEKASVRLVSERTA
>gid:10921  TP0509  alkyl hydroperoxide reductase (ahpC)
MESLIGKRVIDFKLPAYVGGKFTEVSNASIKGSWAVFMFYPADFTFVCPT
ELADLARVYPSFVEIGCKVYSVSTDSEYVHKAWADATDTIKNLPYEMISD
KAGKLAGFFGVLLPDTWHALRGTFVVDPEGLVKAFEVHDMGIGRDADELL
RKVQSAQFVAKHGDQVCPARWKPGAKTLKPGIDLIGKI
>gid:10935  TP0524  ATP-dependent protease LA (lon-2)
MAKNTDIEHDAHEPAGHGDVRESAVENPSASAVSDGEERATFAPEVAPQT
DTESAQGAAQESEPEVQRAGEAEKGVPEKAKAVVPLDELLPQKVHLIPLT
GRPIYPGIFTPLLISDEDDVRSVESAYSDSGFIGLCLVKTDTQNPTISDL
YEVGSVARIVKKINLPDGGLNVFISTQKRFRIRKHVHHSKPIVAAVQYLS
DLIEGDPLEIKALVRGLIGEMKELSENNPLFSEEMRLNMINIDHPGKIAD
FIASILNISKEEQQRTLEILDVRKRMEEVFVYIKKEKDLLEIQRKIQNDL
NSRVEKNQREYFLREELRSIKEELGLTTDPKERDQRKFRALIDSFHFEGE
VKEAVESELEKLSLTDPNSPEYSVGRTYLETVLSLPWHAPEKEEYDLKKA
QKLLDEDHYGLENVKERIVEYLAVRKLRADTKGSIILLVGPPGVGKTSVG
KSIARAIHKPFFRFSVGGISDEAEIKGHRRTYIGALPGKVLQGLKIVKTK
APVFMIDEVDKIGSGARGDPAGALLEVLDPEQNTTFRDHYLDLPFDLSHI
VFVLTANSTDPIPRPLLDRAEIIRLSGYIDTEKVEIAKRHLVPKTLEKNG
LKRACVSYRKEVLLHLVHSYARESGVRGLEKSLDKLHRKLATEIVLGKRS
FDDKCLMDEALIGTFLGKPVFRDDMLKDANKVGTAVGLAWTGMGGDTLLV
EAITIPGKASFKLTGQMGAVMKESASIALSWLRRYSAQQRIASPNWFEKR
AIHLHIPEGATPKDGPSAGITMTTTLFSLLTQQKVKPRLAMTGELSLTGQ
VLPIGGLKEKTIAARRGGIKEIIMPKANVRDLDEIPEHVKKGMVFHLVES
MEEVLSLAFPKGKRVRAGTAAQSASPETLTG
>gid:10957  TP0546  periplasmic serine protease, putative
MAGRACRRYSPRYLCLQCGGHQCRGFHPRLCYRCCGAGAAHGRRACRFSG
VFLCSAQGEYLQGCLCGGYFFRRFSGCIRRGVARCCPTFCCRLRAVKTAS
LCLRSAWLNVALGGVLGVLSGCRVFDERADVRVDRTGKEYLDAQVACAKE
ELRARPLRALMCAIALKRNAPAHQKVAQLYAQALARVKEAFRYSVEKQKW
SEALVFFRSLSALRIPLKDWTERSLHRAQIEQWKKEGAHVLVAAQEKRAG
TSAARSPAAMIKGTVTILVDRGIRVEHGRGFADRVIGSGFFIDKRGYIVT
NYHVIRSEVDPAYEGYSRAYIKLPSDNTVKVPVRVVGWDALADLALLKTE
ITPEVVFGLGSSKNLDVGSKIYAIGSPAGLERTLTSGIVSAKKRKLLSVG
GGVLQIDASINRGNSGGPVIDEEGCVQAVAFAGVEQHAGLNFAIPVELLK
QVLPSLYRGGLVTHPWLGAFGETHRVWKNAGVGGVLSSYVIPGSPLSYAG
IPEGAIITTVNDASVSCVADLQAELEKYVPETIVRLAGYRLRDKSKLHDL
AAYEQDEWYCQLGVRPEHPARILYKYDLSYRAFLPLFGMRLARTGTRNTY
RVESLVPGNFADEHGFSTYDVIEIQNIYMIEASEAIVADVYAKRRKAGYI
DTFMRLVAALDNPSFF
>gid:10960  TP0549  ATPase (clpC)
MLQDLSANARKVLLELGQTVAREARASLLQPEHILLALIQHKVGRGYKLI
EKLIEDVATVRLILEQHVLTNEGDVASPQDLPVSGRVKHLLDIAAMEARS
LRCAYIGTEHLVIAFAREEQNPLFQSLIREGLSLDDLRNASIISSPHSDT
TRTRLERKVASVLDEYGTDLTERARAGALNPVIGRNKEITRVIQILCRRG
KNNPVLIGEPGVGKTSIVEGLAYAIVREEVPHILLHTRVVSLDLAAVIAG
TKYRGQFEERLKRIIKEVEETEKVILFIDELHTLIGAGGTQGSLDAANML
KPALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTI
LRKIKSHYERHHQVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGA
MKRVQQRADTQVLRSFSIKVANLTTETERAIALEDWARARSLHTDVVQLR
RRLHALKVEWSAREALSIFAEDVAQAVSLMTDIPVHSLEGDELCRFTNIE
RDLCATVRGQREAIATLARAIVRARVGISSDTRPIGSFLFLGPTGVGKTL
LAKTLAEFLFGSADALIRIDMSDYMERYNTSRLMGAPPGYVGFENGGLLT
ERVRHRPFSVILLDEIEKAHPDVFNVLLQVLEEGELQDNLGHTVNFRNTI
IIMTSNAGTRGLGENVPGFQTARARNIEYRQLRVQALREIKRIFSPEFLN
RVDECVVFAPLERETLQEILECELKKLAERLRGKDIVLRYSAAAKAYCLE
HGFDPFLGARPLRRVLQQEIENELALRMIHGTLRAGSCVHIDSDGARLHL
STEKSYLTLHPQEI
>gid:10975  TP0563  T. pallidum predicted coding region TP0563
MSMTSFYERIGAILRDRLNSDEDPFDQWDNRGGKYRTCAGRMERRPPPKK
NPPPGPVRVPVPPELVEDFAVLSVPAGLPLSYCKQSWKRLLKKYHPDVFT
CTHTSEQAADIVRRINSSYKRIETWFETGALPTDNKS
>gid:11027  TP0611  ABC transporter, ATP-binding protein
MPTLLDIRDLCMSIADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTI
VGNPHCTIERGEIYFQGQCINDVPVYERARRGIFLSFQTPEEVPGLSVEE
FLRAAKEAVLGTKVSVLDFHTQLRAKLARLRISEAYASRGLNVGFSGGEK
KKNEILQLAVLEPKLAILDETDSGLDVDATRIVFEGIDDIRTPDMGFLII
THHREVLEYIKPDVVHILVDGTIVKTGDVSLVHYVVEHGYADFATPRAGE
QGGTPVSPE
>gid:11028  TP0612  conserved hypothetical protein
MNTQQQRQLLQPRRRTYVSDIKRGIYDVKDAVTYTYSTGKGLNAQVVEKI
SRRKREPQWMLDLRLRSLRYFMKRPMPEWGADISDLDIQEIVHYIVSDFK
PIAESWDDVPEEIKKTFDRLGIPEAERRSLAGVGAQYDSEVVYHNLRADL
EQQGVVYLDMESAVHKHEDIVRAHFMHLIKPNEHKFAALHGAVWSGGSFV
YVPKGVQVDLPLQSYFRLNANQSGQFEHTLIIVDEGASLHFIEGCSAPKY
YKNALHAGAVELYVKKNARLRYSTIENWSRNLYNLNTKRAIVDEDGVIEW
ISGSFGSRVTMLYPMSILRGDRSRSEFTGITFASAGQYLDTGTKTVHLGR
NTVSEVHARSISKNGGTANYRGLLSIGPKADGAKAVAECESLMLDNQSHT
DTIPIIDVRTDNVDIGHEAKIGRISDRVVFYLMQRGLDEQTAISLIVRGF
VEPVSKELPLEYAVELNNLISIELEGAIG
>gid:11029  TP0613  conserved hypothetical protein
MKKREFFKRLGYHAQDVASQPFSRTQVTSSSALVRSSSIEHFLCTEPERA
ARAFDFRTRDRQRHCGLGEAYVQEVKEKRNAGVYLSVPRTSETVHVLIRF
TMDTHNRVLYDQTFLDIQEGARVKVLVCVDAQGYTPQDAPALVGPQALER
APFRNGLVSVQVGRGASVELIKVQNTHPTAVNFETVHLHAQESAQVRCYD
VQIGAQISGVSNSAFLRDEWARVEIHPLYFIDKARRMDLEHNLIVEGKNS
HAHICACGVVKDGARKTFRGNIFLHRGCSHSVARFSDRTILLDRTAVGVS
IPTIFCDEDDVVGEHAASFETIGSDVLYYLMSRGLDEYGAKRLIIEAAFK
PVFALIDDAHIRETLVRNFDESLDRAHRKRKA
>gid:11049  TP0633  protein-methionine-S-oxide reductase (msrA)
MLANLQHLSDIQYRVTQQSATETPFKNEFWNSYQPGFYLDVVSGELLFLS
EDKFDSGCGWPSFSAPAYARAVIEKEDRTHNMLRTEVRSRNANSHLGHVF
KDGPPERGGLRYCINSAALRFVAREEGTALFAAGCFWSTEAYFRRVKGVL
RVRVGYTGGTTKSPTYRNVCTGTTGHAEAVEILFDPQVISYEDLLKHFFR
MHDPTSLNKQGGDVGTQYRSAIFYLSGTQKQQAETLMGRYAGAGKFTRPL
VTTLEEARDFYPAEEYHQDYLTKNPGGYCHVSLHLASEPLE
>gid:11101  TP0680  o-sialoglycoprotein endopeptidase (gcp)
MNVLGIETSCDETAVAIVKDGTHVCSNVVATQIPFHAPYRGIVPELASRK
HIEWILPTVKEALARAQLTLADIDGIAVTHAPGLTGSLLVGLTFAKTLAW
SMHLPFIAVNHLHAHFCAAHVEHDLAYPYVGLLASGGHALVCVVHDFDQV
EALGATIDDAPGEAFDKVAAFYGFGYPGGKVIETLAEQGDARAARFPLPH
FHGKGHRYDVSYSGLKTAVIHQLDHFWNKEYERTAQNIAAAFQACAINIL
LRPLARALQDTGLPTAVVCGGVAANSLLRKSVADWKHARCVFPSREYCTD
NAVMVAALGYRYLIRGDRSFYGVTERSRIAHFSKRGGDRLAAQRSAASQP
LF
>gid:11188  TP0765  cell division protein (ftsH)
MRIIPFSEFKDRIASGEIVKVVVGSPYFVGYTSARPAPSARGFSLLSERE
APTYHAIGVLSDSFLSMLDERQVVYSIKPRERNYLIETFQYLFPLLILFF
VWRFFFKRMASNVSGLGSSIFSAGHARSAAVEEGKVTTRFADVAGVDEAK
EELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEASV
PFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAIGKSRL
NAIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGR
FDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLA
NVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQKKSRVIREEERRIIA
YHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDRHIVTEQQ
LLAEVDVLLSGRAAEFVAFGEVSTGAGNDISRATDIVRKMITDYGMSEKF
QNVALTRRGTGYLAEPQLAREYSECTQQYVDEEVARVLAERYRAVVALLT
EKKELLEYIATRLLERETIERDEFEEVIRCEHDLEGLKKRLSQQQEGASA
PAQGQSPPS
>gid:11196  TP0773  periplasmic serine protease DO (htrA-1)
MRNKVRVLAVVAALAAACAVGFFLGRWFDFSARSSVLEAADSLSVSSSEA
ASFSTVVAEGDPYTVDERQNIAVYRSANEAVVNITTEMVGVNWFLEPVPL
EGGSGSGAIIDARGYVLTNTHVIEGASKIYLSLHDGSQYKATVVGVDREN
DLAVLKFVSPPGARLTVIRFGSSRNLDVGQKVLAIGNPFGLARTLTVGVV
SALARPIQNKGSIIRNMIQTDAAINPGNSGGPLLDTQGRMIGINTVIYST
SGSSSGVGFAVPVDTAKRIVSELIRYGRVRRGKIDAELVQVNASIAHYAQ
LTVGKGLLVSQVKRGSPAAQAGLRGGTTAVRYGLGRRAAVIYLGGDVITA
IDNQPVANLSDYYSVLEDKKPDDEVRVTVLRGRRQHVVAVRLTERSDE
>gid:11226  TP0801  ATP-dependent Clp protease subunit A (clpA)
MKIIISASVQIILDQAFDLARKRRHEYITAEHVLFSALAHPAALEIINLC
SADIALIHSNLSEFLKTQVPVDLSHTPSQSLGFQHLLKRAVLYCEANKKS
ALEVGDLLVSLLQAETNYASYYMRMSGMSTARLIEVIARVNGIRHGDKNV
SMGSNAQERYSESDDVGESAGHGPPLDGTEGDGNTADVHVHYEHCAHKRT
DADTHRYTVLEKYTVNLTERARRGELAPLIGRTQEIERTIQILCRRQKNN
PVHVGEAGVGKTAITEGLAQRIVRCDVPEALEGVEIFSLDMTSLLAGTKF
RGDFEERLKRLAEELEKKTQAILFIDEIHTVVGTGSGGSGGLDASNLLKP
LLSSGKIRCIGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILE
GIRTLYEDFHAVHYSDEALAAAVRLSVQYIQGRHLPDKAIDIIDEAGACA
KLSRGKHGTEGVCSVIGESDIDEIVAKIAKIPKQRVSASEIEKLRNFERS
ISEKIFGQGEAIDLVTRTLKRARVGLRVKHKPIANLLFVGATGVGKTELA
RTLAQELGIVLHRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTDAVRK
QPHAVLLLDEIEKAHPDIFNVLLQVMDYATLTDNQGRKADFRNVILIMTS
NAGARNMGVSLIGFHKGQVGTAVIDEAVERIFSPEFRNRLDAVIRFDALS
LETMERIARKELALVCEQLQKKHIRFDITDDALALLAERSHSGGSGARNV
ARLVEQEVANVLADLMLFGGVAEGDALRCTVKDRHAQCNFLRIECVQSSY
SGSIQDALG
>gid:11238  TP0814  thioredoxin reductase (trxB)
METDYDVIIVGAGAAGLSAAQYACRANLRTLVIESKAHGGQALLIDSLEN
YPGYATPISGFEYAENMKKQAVAFGAQIAYEEVTTIGKRDSVFHITTGTG
AYTAMSVILATGAEHRKMGIPGESEFLGRGVSYCATCDGPFFRNKHVVVI
GGGDAACDESLVLSRLTDRVTMIHRRDTLRAQKAIAERTLKNPHIAVQWN
TTLEAVRGETKVSSVLLKDVKTGETRELACDAVFFFIGMVPITGLLPDAE
KDSTGYIVTDDEMRTSVEGIFAAGDVRAKSFRQVITATSDGALAAHAAAS
YIDTLQN
>gid:11265  TP0841  periplasmic serine protease DO (htrA-2)
MPSADTIARRVAGDSGNAGGRTLLPVGVSRESVQLLERLQNANRQVTAEV
LPSVVTLDVVETRKVRVRDPFGGFPWFFFRGPEGPGAGPGGGSGNKGEAE
EREYKTEGLGSGVIVKKTGKTHYVLTNYHVAGKANEIEIKLHDGRIVKGK
LVGGDQRKDIALVSFEDADPNIRVAVLGDSDAVRVGDIVFAVGSPLGYTS
TVTQGIISALGRFGGPGNNINDFIQTDAAINQGNSGGPMVNIYGEVIGIN
AWIASSSGGSQGIGFSIPINNVKSDIESFIQYGQVKYGWLGVQLVATDAD
TVASLGIAKGTKGVLAAEIFLGSPAHKGGLKPGDYCVKLNGKEVKDVNQF
VRDVGALRIGQTAVFDLIRGGVPMTLSVRITERDEKIVNDYSKLWPGFIP
LPLTEAVRKRLDLKASVRGVLVSNAQSKSPAALMGLKSADIVVAVNDQRV
SSVREFYAVLARQTREVWFDVLRDGQTLSTVRFRF
>gid:11267  TP0843  heat shock protein, putative
MHFSMCPDTMASPWKVWPLVEDYYRVLGVSHRASTPEIKCAFRKKAKALH
PDLVSHTAELECEAVARERALRRILTAYEVLSDPGRRAKFDLLYARFCAR
PAPAGFDYRVYLRAQGTLCAMVELILFDLFHGFECDAVRAYLSLKCRPEG
FNLATHLTREDFMDCGFVLAEELHVRGECYECFTLLQDIVFEELRCAYFR
HFFPEVLKLAEHIALGTASVRGRNGKSCVYCARAHACLPAQEIVTFYACL
VEYYERTGDRRRARGYAQKMDSVR
>gid:11271  TP0847  T. pallidum predicted coding region TP0847
MLNLGQVKVLEEKVAKAVHLVQMLKEENAALRAEIDGRGKRITELEQLVL
XFQDDQTKIEEGILKALNHLSTFEDSAYGEALTQHAAKVLENREHAGLSE
ELTSRTQMEIF
>gid:11286  TP0862  peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa (fklB)
MILKKEAAGVCSFALLLLAGMSIFSCRKGAEGVSSAGEAADKKALTADQL
DPRKVQEQERQKTPLSKKSVGYAFGVLMGVTLQDSKLDVDLGQVWKGLKK
TVSADKDKQALADAQDVLQRAFEAYRQKEVEKNSQEAKAFLEENAKKPGV
QVTSSGLQYEVVKAADGPKPQGGQRVRTQYKGTLLDGTVFDASRDKPAEF
PVDGMVPGVSEGLKLMPVGSTYRFYVPSSLGYGERGIEGVIPPGALLVFE
IELQEILPDSASKK
>gid:11299  TP0876  conserved hypothetical protein
MNILAINTVAHALNVAAEGAQGTAVVSIEGAHCCIQQQLVRALDVVVKRA
GFPVQETQIVACPRGPGSFTGLRTGFAVAKALQLGVGARFIAVPTLRLAA
HPFRAFTGRVLSILDAKRGRFFWNCFKSGEPLFEDSHNHAQEIVKKVDTR
VPCLVCGTGTALFKSVMESQDNTVPFMYVETDAHEGAKTLLALVKVLNHS
AATPGERGAPQYTTRTYAKGS
>gid:11342  TP0919  thioredoxin (trx)
MALLDISSGNVRKTIETNPLVIVDFWAPWCGSCKMLGPVLEEVESEVGSG
VVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTL
IQKNA
>gid:11369  TP0943  flagellar protein (fliS)
MAYEDPALSAYRQVDVKTASQGELILLLYDEGIKQLGCAIELMDVQKIPA
SDIERVHRHILKAQEIITELSVSLDMEAGEKIAQNLLSIYAYFNQQLFHA
NIQKRADELVTVRDMMRQLREAWFQIVRSPASSVTSASPASYNVNLAG
>gid:11373  TP0947  peptidyl-prolyl cis-trans isomerase, cyclophilin-binding (cyp)
MNTQVWRVCVGVMLFCFVGRIGCAEEKMVREEGLAVADGIYAVMETNRGT
IVLSLFFEKAPLTVCNFVGLAEGTLAVCKGRPFYQGLTFHRVIKDFMIQG
GDPQGNGTGGPGYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHV
ATPWLDGKHTVFGKVVEGMEVVHAIIAGDTIRSLKIVRRGAAAKRFVCDQ
AQFDQLRKRVSAASK
>gid:11385  TP0959  T. pallidum predicted coding region TP0959
MNVHRVLSLGMQSVPSVTLSKTGKMEGSGSFAARLSAAQQGAACSAEKND
ALYTQARELETLFVRVMVQSMRETLSGQTLAGERSFSGRLYEDALYEHFS
AQLAAQGGFGLAEKVYRQLNPRREAAPGA
>gid:11410  TP0984  heat shock protein 90 (htpG)
MAQYEFQTEVSQLLTLIIHSLYSHKEIFLRELISNASDALDKLKYEALVD
GTYKQLHCEARIDIAFEEDAQRLVVRDTGIGMNAEDLRANLGTIARSGTK
AFLSTLTRDQKQDSNLIGQFGVGFYSAFMVASKVEVITKKAAENTVWKWT
SEGQNAYTLDEVDAAAFPVLEGVAEGSAGTCVVLHLSQENSEFATRWRLE
EVIKKYSDHIAFPIYLHYLQKEYDKDGAVTDTQKKVDQVNDAGALWKRPK
SELKEEDYHRFYQTLTRDSTPPLLYVHTKAEGTQEYVTLFYVPAKAPFDL
FHADYKPGVKLFVKRVFITDDEKELLPVYLRFVRGVIDSEDLPLNVSREI
LQQNRVLAAIKSASVKKLLGEFKRLAECDGKKYDEFITQYNRPLKEGLYS
DYEHREQLLELVRFRTLSESVPEDGWTSFAEYVSRMKPDQKAIYYIAGND
DRVLRQSPHAESYRLQGFEVLVMSDDIDGIVMPSVSKYKEWELRAINRLG
SEEELRPNEETDAAAQREQGFKPLLERLTHILSDSVKEVRLSKRLSDSVS
CIVIDENDPTVQMERLMRATGQTHKSKIKPILEINASHTLVQKLKESTDE
AFVEDLAFVLLDQALLIEGMDVGSSVDFVKRVNRLLARG
>gid:11425  TP0997  protease IV (sppA)
MYSLRVLFRRLLRGLNAVRLVSLNVIFFLLLFLFFKVLVGDRSRRPSQKV
VQSGTVLLMRPVGVVTEQRPRVNLGTVFLNPKGSAILLSDITQALRNAAT
DRRIESVFFDLSNMSGWTSGHFVEMESALSEYKKSKKPLYVFSTSYSLAD
YYIASFADEIILDPMGSVDLSGFYTETLFYXGMEEKIGVRWNXVHAGVYK
GMAEIFSRKDFSPEVRRNYQSVFARLWQQYLSDVSRNRALEVQHLARYAD
RRLELLQKYNGDGARTALAEKLVTRVCSYDEAGVALKFLKEDDYESAKNF
VGLDDYNRDRAQRQVQDQVGIIHLAGPIAAHRDTELGGTISDEVSALLDV
AMSDPDIKAVVLRIDSGGGEVFASERIRRALARAKRRGKKPVIVSMGAIA
ASGAYWVASAADYIFASPYTITGSIGVLSVLPTFETFLERYAGITVDSVQ
VHGVRQPSLLRSGTAEDTARMQLDVMATYRTFLSVVSAGRNLTLDRVAAV
AEGRIYAGEDAVSLGLVDALGGLDEAVAHAAKESHCRQYSVRVLKRSATY
GEEFLQSLWDVLQKRSLAFGERVIIGELLQLDLSKGTYVYEPLRLHWR
>gid:11441  TP1013  chaperonin (groES)
MKIIPLADRVLVKTDKSETKTASGIIIPDTAQEKMQSGTVIAVGSDSEKI
KVSVGQRVMHDKYAGNPVKIDGEEHLLLKGADILAVIE
>gid:11444  TP1016  basic membrane protein (tpn39b)
MGRYIVPALLCVAGMGFAHAQSALQPIAEVNLFRREPVTLGQIKARISAI
EKEMGKKLSTAERRQFMDSLIDEKLFAQAAEKAGIQVTDAEVNQYFNGML
SQQIGRAVTEAEFANYVKEKQNISLDQFMKQQNGMTMAEYKKFLKTQVST
QRYVAQKKADEFRNLKGPEDSQIRSYYELNKQAFFRPDTVKLFLISVPKG
SGPAAAKAKAQEFVKKLKSSGVKATADIKSKANGAQAGYSAGEIYLGKTA
VTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAKILTL
SDLVEPDKTVSLYEFIKNLLTSQIQQKALEDAIREVSAELRKSGTYKVFL
ADAELGKVLDW
>gid:11450  TP1022  DNA repair protein (sms)
MAKKTERAFSCVGCGYVHPKWLGRCPECGEWNSFEETPSLSSGDVRAVKK
ASSSPVQAFPLCAVRAQDAQRISCGIAEFDRVLGGGAVRRSAIMIGGEPG
IGKSTLLLQIAAACGKSVLYVSGEESPGQIRGRADRLNIPIQNIELLCAT
RVEDVERVLNTRCPTFVIVDSIQTVFSPEAGAIPMTINQLKYCANELIAW
VKERDSVLFFTAHVTKDGNIAGPKVVEHMVDTVISFERNEEDIRFLRALK
NRFGSVDELGIFTMGENGLSAVQDTAGFFISTRQGMFPVGSATVPVCEGS
RVFMVEIQALTVPAKSSVTRVFSDRIDSARVSRVAAVIEKRVGLKFSDQD
IYVNVAGGIRLYEPAVDVALAMALYSARQNTPVKTNAAFIGEVSLSGEIR
PVRRLKTRLKTAYGLGFSTIYVPIGVEHDTPPPYTLRVVGTLAQTIAEIF
SKAKA
>gid:11469  TP1041  ATP-dependent Clp protease proteolytic component (clpP-2)
MLFKRSFYATLSGSCLVWGCCATVYREHAREKWGVGVVMRCDATQEKRAH
SESGESVFFQKFLETRQILLSGEISKDLAEGIVRQLFVLESLSVSKPIYM
YVDSPGGDVDAGYAIFDVIRFVKTPVYTIGMGLVASAGVLVLLAAKKDCR
FGLRNSRYLIHQPLSGMRGVATDIEIHARELEKTRSKLNALIASETGVSL
DKVAQDTNRDYWLDASQALEYGLISNLIEKRADLPKK