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# Lactobacillus acidophilus NCFM, NCFM

>LBA0327 replication protein
MKKAIRARQFMYTQDLDHLPFKKEDLKTLLEKSSAEEWAYILHDKDIGKN
GKTIRPHFHVVMKFKDAKTISRVAKLFNDKQEYIEVWRNTIGNAYSYLIH
ETSNAKDKHHYDPIEVVSSFDFETKIKQIRKKVAKLSKKDIDDLIDDYSN
EILTKTDLQEKIGVLEMAKHKTLLDHIDDILAYKKHQKFLKDFQGQKCTT
YWIYGESGIGKTKMVREILEQLHPNNFVVLGSQRDHFQEYRGEEFIVIND
LRPRDYEYGQLLTLLDPWEIDKMAPARYHDKYLNARAIYITTPYSPMAFY
NESGIVNSLIDSFEQLNRRILSLHLTSDTYNQMKADLIRDDQIAEAIWKI
KKTKSTSQTDNDKSND
>LBA1473 alfa-l-rhamnosidase
MKITNILVNQMEHPLGFDLSNLRITFELTEMENIIGNVYKNISVGKVESE
QPIYFEPDELYENNAFKINMELEPRTKYWVKIGVRNDNEVTSSNTWFETG
KMDEKFYGKWITNKKDVENTLFKKDFELANKQIKSARLYSTTLGVYEVDL
NGVKVGNEFLAPGFTNYDKIVQLQTYDVTKLVTKNSNNELVFSVGDGWYK
GNLGFDGGQTNIYGDKKSILAELHVTYTDNSEQVISTDSSWLTTEGKIIK
SSIYYGEDIDDTKDILDWSSVVILNKSTSIVRDRLSLPIMKKEVLKVKEI
IHTPKNEIVLDFGQNHAGWPVFINRLARGKKITLQMGEILQDGNFYNKNL
RLARAAFTYISDGEEKLIRPHFTYFGFRYVKISGVTDVNKDDFESWVLYS
DLKQTGFIKTNNDKVNRLFKNVIWGQKSNFMDVPTDCPQRDERLGWTGDA
EIFAPTASFNMNTYEFYKKYAKDMLVEQEDNKGMLPIIVPSLKQKSTGMA
IWSDAATIIPWVTYRFFDDLGVLKQNYSQMKNWVDWITQNTKTKYLWIGQ
MQLGDWLSLDNGANPQGKTNEDYIASIYYFVSASIVSKAARLLHYDMESD
YYENLARNIKTNILNEFVTEKGRIAIDTQTALVLALHFGLVHDYQKSQVV
ADLVKKVKDDNKHLQTGFVGTPFLLSVLSNNNQHHLAMDIFMQEDCPSWL
YEVNMGATTIWERWNSVLPDGKMNPEGMNSLNHYSFGAVMMWMYQCVVGL
NQFDAGFKEIYFAPKFDCRLKDIYSEFDSTYGKIKVEYHLETNEKHLIRM
NLVIPFGVKMKVKLPRSAKYLINGKEKIGIVKLEYGKYDISYIPTKSYLN
YYDLNSKLVDILDNNDLVKRIDQIDEKILQKVKRMGNTRSIFINKKIDEL
LDFEEISQEEKNQLVDILHKTIFIKLNLF
>LBA0405 cochaperonin
MLQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSN
GDKLPMVVKKGDVVLYDKYSGTNVEYEGEKYLVLHEKDILAIEK
>LBA0388 putative glycoprotein endopeptidase
MRILSVSTATNHLSVALNDSQQIIVEKNEQDERNHSEHLDPLIDEILKEN
QLTLKDIDRFAVAIGPGSYTGLRIGITTVKMFASVLNKEVVGISTLQALA
KSVKEDALVITGLDARNNNYFAAGYKSGDIPDNVIPDGHYNIDVLIKAIQ
DYTAKNEVKKLVLVGTGLEKQDEKFKALNIPYKYGNDSQNVIHAGLIGQL
AEYSEPVDPDKLLPRYLRRTQAEVDWHKKTGKPFEPDSHYVEEV
>LBA1755 ABC transporter ATP-binding protein
MAVLEIKDLHVEVKDKEENTQKKILKGINLTLKTGEIHAIMGPNGTGKST
LSETIMGNPKYHVIQGKLLLNGEGAR
>LBA1677 conserved domain
MRTFFKFCRNILLLTLIAFGIWSYQNDPNIQIATQDSLSTLNYRINQLLK
NGTVTSSSKKNPEVKTDTDKTANDSTSDSRVWSKPEANVYIDIHDNMQLR
SATIDAMNAWNRTGAFTFKQIDNKKNAQIIVNVVDDSGTDAAGETATTYN
PATGHLLKATVHLNRYYLQNEWYGYSNNRIINTAEHELGHAIGLNHTNSV
SVMYPKGSIYTIQPQDIKNLKKIYHEN
>LBA1754 hypothetical protein
MVKAHVECDTIIMDDMSSSDTIPTNSIENSNVAMEHEATVSKISEEELYY
LQSRGIPERKATEMIIMGFVEPFTKQLPMEYAVELNRLISFQMEGAIG
>LBA1428 hypothetical protein
MSDYLVKSQLENKEWQISNHVRDHNFICDANDKKYDAGPNPVEYLCGSVN
SCIVMSAGMITKAHQLDVKNFNVKNYAKTEKMGYGKSVVTEMRIEVSFDS
EMSKEEKEEFLAHVLHVSTIYQTIKEAIKIYVELT
>LBA0390 endopeptidase
MSEKKDVRILAYESSCDETSTAVIKNGREIESLIVATQIKSHQRFGGVVP
EVASRHHIEVVSQITKEALNEANCSWKDIDAIAVTYGPGLVGALLIGVSA
AKAVSMATGIPLIGVDHIMGHIMAAQLKDEIEYPAIALQVSGGHTEIVLL
KDPTHFEIIGDTRDDAAGEAYDKIGRVLGVNYPAGKTIDAWAHQGKDTFN
FPRAMLEDDDYDFSFSGLKSAFINTCHHADQIHEKLNKYDLAASFQAAVI
DVLAHKTIRAIKEYKPKTFIMGGGVAANQGLRDRMSEEIAKLPKADQPKV
ILPDLKLCGDNAAMIGAAAYNLYNGGQFADLTLNADPSLELPYAKSMLN
>LBA1564 putative membrane protein
MMIRIILGVIIVLAIVYICCGFRIVPQNNEGLVETLGKYSKTVKAGFIFI
WPLFQRLRKVPLALQPLEISKYSIITKDNAEITTSLTLNYLVTDSYRYFY
NNTDSVESMVQLIRGHLRDIIGRMDLNSALGSTKEINDQLFVATGDLTDI
YGIKVVRVNVDELLPSPEIQRAMDKQLTADREKTAAIAKAEGEARTIEMT
TKAKNDALVATAKANAEAVKTQADADAYRVKKMEEALSNAGEGYFRNQSL
DSFNQLAQGPNNLVVVGKDEMTDLGKVPALKKVWDESGQNEDE
>LBA1126 peptidyl-prolyl cis-trans isomerase
MNYPQLNLDKVDGPKAILKTSYGDIEIQLFPEQAPMTVENFVRLAQKGYY
DGTTFHRVISDFMIQGGDPQGDGTGGTSIWNHPFEDEFSRELFNLRGALS
MANSGPNTNGSQFFIVQNKNMPKRYIKQMEPAGYPKEIINAYKQGGTPWL
DGRHTVFGQVISGMDIVDKIAKAKKNKLDKPLEDIKIDSIKINKSIFND
>LBA1652 mucus binding protein precursor; Mub
MVHEKKKMRKNHKKITHKGKKITTGAASVLLGAGIVVGANARPVKATSSR
EDEITEVDTINVISSETEKADVEQRTDTTETVETEGNVDNTNTEVSVPID
ETINTEAQAANNTTQVESTVEDTTQEETTETQQNPSVDNQEPVLSDPPSV
ESPEDSATEVTTTKTTDEVKNAADEANKENKDKLDAEINKAEDNGHTVTQ
DGDKVYKADATNIDKIIEDLNQFTADQITDIETKLAKYKEELEAYKADQV
RYEAELKNYQTAKDAYVKKLEEWGLYKPGDIDPSDISQSLILGEEKNSKV
EVLNKGSVVDEGTGSILNGLLNHFYTIDEKFDGEFLKLQYTNLENITYMG
KNIDSIQIIFSGWNPNYKGKNADKRTSGIYFSDKLTDGFFYVNSDGVTME
MILFENGKTINLDKNSAYITAGSLNSQGTGNDYIEKAEIFNNSSEYGGSA
VTFQDSFIRRHDGTYGGDVLYADQNIEVLAVYPGKDQTLEDAIEEQKKLA
LEAGWKQEIIDKFINWDSSTDRSKAIFGAGAFMVYGNKIKIRFSNGIGSA
WATYSTSIPGMAFREEKPKEPTVPEPPKLDLTYTPGHIELSKSNVHIHYV
DVHDTAQAGKNDSFVPDDGIELDDHVDHQLDLLIGTGYNHDLWNFEDAGY
ILAEEIKDGVQNGTVIKDDQHHYVYLKHKFIPTTDEENEKKDVNQVIHYV
YDATGETAYKDYHAVTLHFIKSGQKDVVNGNIIWGNWTLAQDFAGVKSPS
IEGYHLKDKNDDVVGPYTIEVTEKNYQNNLDVEYTVRYVANATQELNLKK
EVNQVIHYIYENGTKAHDDYHALTLLFEKKGIKDLETGEETWGEWTKTQT
FVVVKSPDIQNYIADRLEVGPYEITVTDENYKTNLDKDDIVIYRARIEEV
TRDKVVNQVIHYIYEDGSTARPDHVSVKLVFTQTGVKNLATNTTNWNGEW
TKTQTFVVVKSPEIEGYTADREEVGPYDITVTNENYNDKLDKEDTVIYRA
NTNVPDNPDPDNPTPDNPDPDNPTPDTPTPDPTPGDDEEIATPPLPEDEI
GNYPSQSDEDDEEERTAPHATGKETRSGTNKNNARVISLENAGSDDSVTP
ENVSTEATDKTDEKQTTVNSTNEKTLPATGEEKDDFAKVMSGLAAALGIT
GLAVTSKRRKATAKRSKKDKKNGK
>LBA1391 hypothetical protein
MKKHKFLKKIIILTMLLGGFANSAPVITSSSTAEAATKVKTKKKTTKKST
QKKTKIKVDSNRKKKNRAVKFVKKTTKNQIPTASIFIYINQNDPNYQTVQ
DAIKAWNATKVIKFKQAFNYQKAQIIVTAHDYGDTSWAGLTEIPDTPRGY
LYGSVVYLNNFYLRQSTPQVALSVAEHELGHAIGLQHNDTQPSVMNSSVT
EQNAYTIQPCDIAAVKAIYNEK
>LBA0205 heat shock low molecular weight
MANDMMNRRNDMMDAMNDWFGFPRNFFDDSEIENIMQSDVAETDKDYVVK
IDMPGMNKDDIKLNYKDGVLSVAGTRKAFKDTNDKERNIIHKERSEGSIS
RSYRLPNVVANEIHAKYDNGVLTITLPKQTAGDDDNSIQID
>LBA1901 putative thioredoxin
MKLLESNLKINNAVLYFNNDGCSLCYTEKKVIHDLEKNMKQQIPIYSIDA
RNQKDLVKKYEILSVPSIVFIKNGQKVDQFNKYLNGKQIETVFTYYFGSL
DND
>LBA1793 hypothetical protein
MNKKNVSMLMLSPAILLMMNSTIVHADKGSTSHEISSKVVSKTKNDDKNV
PESEQETSSNNEIDQSQDKQEKEEQAIPEDQNDQSQNTNNQDPNDASEED
DEDEVSVEDYENNVKDFHRVKMQEVKDLLAEKNNQEHLMYIGRPTCYYCR
QFSPDLKDFNEIVKGKLLYFNIDDEEGAHDYAFKVIGIPGTPTTMRFMNG
KLISAWIGGEKTGQELHDFLYSDTANKLVEQVVIKNQSNDTATQADNDVV
ASESDKTPEVTVEENNQAQSNNDVAITNFAENSVFENAKNVASSTADLTQ
VATGDQDDVAPKAETKNKTVKKPIKHKIVANKVKKQAKLHKTNIIIPMSA
KKREDVKENNQYDTVKVHGTSPNAIKDKQARITMLKELENDTSDTISTVS
LPSTGEKKNIWIQLMGMISVLVSVVLGISLRKKTKEEK
>LBA0161 anaerobic NTP reductase or activator protein
MPKKDKNDQEGPDIRSSLIKVNIDGDTVFVDSNQYKPQVDHAKKLLKQKA
MPKNPKPQEWKTEDYSLHKIADYKPFNFVDGEGVRCSLYVSGCLFDCPGC
YNLVAQNFNYGRPYTQELEDRIIEDMSQSYVQGLTLLGGEPFLNTWVCLK
LINRVRKEFGHSKDIWSWSGYTWDELQKETPDKKEMLSKIDILVDGRFLE
AEKDLTLQFRGSSNQRIIDVPKSLKANKVVIWDKLER
>LBA0422 thioredoxin reductase
MVEAINDQNFEEETNSGVALIDFWATWCGPCKMQSPVIEQLAEERQDVKF
YKMDVDQNQDTAKNLGIMAIPTLIIKKDGNIVDRITGYTPKEKLNQILDQ
YAN
>LBA0286 prepilin peptidase
MNSIYFLLNFFIGACLASHANVIYERWDTRNFIFSRSYCDNCKSTLSLLD
EIPLFSYLLLKGKCKYCQKNIPRELFFFELVGGFAFCTINFSDKSQIITS
IFIFSLLLIAISDYYQNEFDLIFIFPAIITSILFNRIYLFNWIEWLSFLP
VLIVLSIYSFKQKMGLGDLLIYVLISTYFTPTFANLTLLFAALILIIIHF
TENNLASYNYPFIPFIFIGLIISKFIFEQ
>LBA0846 trigger factor cell division
MSVKWEKTGKTTGELTFDISKDEIKLGLDQAFKRIKKNLRVPGFRKGHVS
RVIFDQYYGEEALYEDALNIVLPNAYAAAVKEAGINAVGQPQIVPVSMDK
DKDWTMKATVTVQPEVELGEYKGIEVPKQNTRVYQKDIDAELDKRREQSA
ELVLKKGKAENGDTVTIDYKGTIDGKEFDGGSAENYSLELGSGTFIPGFE
DQLVGHEAGDDVDVVVTFPKDYGAKDLAGKEAHFATKIHEVKSKQLPELD
DEFAKDVDDSVDTLDELKEKIKKDLKDQKEQVANDAIQEAAIEGAVKNAT
IDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTTEDQLRSQFA
KNAAERVKTNLVLEAIVAAEDLKATKEEIDKEIKDLAAEYNMDEKVVRNT
LSDDMLGHDITVRKAMDLITDNAKQVAKSKLEAKDSDDKESK
>LBA0279 heat-shock protein
MNDYLVKSIDKTKNLRLLTITAKGVVSEAQKRHDLWSASSAVLGRTLVGS
LLLAGAELTDKEELTVRLLGNGPVGPAIVTATADLKVKGYVKNPHIALPP
KENGHIDVKKAVGQGWFEVTKDLGLKEPYTGQVPIVSGEIAEDFAYYLTK
SEQIPSAVGLSVFVNPNNSIGEAGGFMLQALPGASDALIDKTIKRINELP
ALSTSFLDGMTPEDLARKILGTDCKILEKDDVAFSCDCSKEKYAGILETL
KSSQLKDMINEDHGAELICNFCGNKYHYTEDELKEILAKKKDDKDY
>LBA0450 ssrA-binding protein
MKEKEENLIAQNKKARHDYFIKETLEAGIALTGTEIKSVRARRINLRDGY
VQIINGSAYLENVHISEYKQGNRYNHDPLRSRRLLLHKKEINRLAKVQAE
RGIAIIPLKVYLKHGFAKVLIGVGQGKKEYDKRQTIKERDQKREIRRKYG
I
>LBA0186 pyrrolidone carboxyl peptidase
MKILITGFDPFGGEKINPAIEAVKKLPDEIDGHQIIKLEVPTIFYESARV
VKNAIEKYQPDMVINVGQAGGRAAITPERIAINFQSGSTPDNSGKGPKEG
KIEADGADGYFTQLPIKKMVTATRKAGVPSEISNSAGNYVCNHLFYELQY
MRVHEFPNLKTGFIHIPFLPSQVKNGRHPSMSLSYMVKGLTASIKAAVDA
>LBA0439 thioredoxin reductase
MHGLNTIVFDSLSEVGGQPQMLYPFKQINDIPAYNSISGTDLIQKLKHDI
KNETEIITNHKVVDVTKQSDGFIIDNIIYARSIIIATGAGAFKPKELPLK
ISDEIKEKIHYFVKDPSQFKNQTIGVFGGGDSALDLALEVAKYANVKLIH
RRDQFRGLESNVKKLKSLKNVEILTPYLPKKIELINNQLDISLKKMGVEQ
LRNVQLDQIVVAYGFRANNRFAKKWGINLEQSNIPVDPTMKTNIDGIYAA
GDVVTYPGRVPLIALGFGEAQIAITSIMRNLFPEKSLTIHSTSI
>LBA1581 thioredoxin
MEKIKELSEDKLQEITKSGRTVLEFSAEWCPDCRFLDPFLPEIEKDFSDA
KFYQIDRDGSVDVAKKLMIMGIPSFVAYQDGKEIGRLVNKDRKTKDEVEN
FLRSLD
>LBA0406 chaperonin
MAKDIKFAENARRSLLKGVDKLADTVKTTIGPKGRNVVLEQSYGNPDITN
DGVTIAKSIELKDHYENMGAKLVAEAAQKTNDIAGDGTTTATVLTQAIAR
EGMKNVTAGANPVGIRRGIEKATKAAVDELHKISHKVESKEQIANVAAVS
SASKEVGELIADAMEKVGHDGVITIEDSRGINTELSVVEGMQFDRGYLSQ
YMVTDNDKMEADLDNPYILITDKKISNIQDILPLLQEIVQQGKSLLIIAD
DVTGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAQLEDIAALTGGTVIT
DDLGFELKDTKIDQLGQARRVTVTKDSTTIVDGAGSKDAIKEREDSIRKQ
IEESTSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRIEDALNS
TRAAVDEGYVAGGGTALVDVEKAIKDLKGETSDEQTGINIVLRALSAPVR
QIAENAGKDGAVVLNKLESQENEIGYNAATDKWENMVEAGIIDPTKVTRT
ALQNAASIAALLLTTEAVVADIPEDKPEAPQAGAAGAPGMGM
>LBA1512 PrtP precursor
MRNKKVGSVTTDYSYLNQSRNHLNLVTGKENDSKLKIWRKNFATAAIIAL
ASGTTMLFSAHSVKADEVDDITVQNDKQVNTTIVQNNKDQQSSDTQQNVN
ENRASSQQAIRRPGTGNKLTDQWPDNYQSDQQNNSSQAETTKISTTGYSN
QTEQQSNNTVPSTVASSTVYKESSDDQAGQKDTNGVELPANNQDHIKGNV
QDAWDQGYKGQHTVVAVIDSGVDTSHKDFQTMPENPKLSQAEIEALIAKL
GYGTYINSKFPFVYNAVDHENQSMKGPDGEPHGQHVSGIIAADGQPNGDQ
EYVVGVAPEAQLMHFKVFGDNATSLDLAQEIYDATNLGADVIQMSLGGGV
AAADLNVADQRAVQYAIDHGVIVSISASNNGNAASIQNPSNVTDLDNYEA
GTHVGNYEPFSSSTVADPGAARGAITGAAETSGLGDKSDMATFTSWGPLP
DFTLKPDVSAPGSNVISLANDNGYTTMSGTSMAGPFIAGAAALVRQRLQQ
TNPELKGADLVAAVKALLMNTADPQIQQGFTTIVSPRRQGAGQINVGAAT
KAPVYILANDGTGSVSLRNIKETTNFELTFHNLTDNTETYTFDDLGGGFT
EVRDTDTGLFHDVQLAGARVTGPNTITVNPKETKKIVFTLNLTGLKQNQL
VEGYLNFTNSKDKLSLSVPYLGYYGDMTSEDVFDKKANEDKPDIKGNRLT
NEDNYPRGIADEESLKELVNIEGNYNWQEVAKLYESGKVAFSPNGDNKSD
LIMPYVYLKQNLQDLKVEILDAKGNVVRVLADAHGVQKSYNEDGTGTVDA
LISVDSGKFNWDGKVYNYKTGKMEVAPDGQYTYRFVATLYNDGPHKVQTN
DTSVIIDTTAPILKDVEYDVTTKTITGTYSDAGAGFTDYSYATVTINDRV
FGFKLNDNDNSTFDNTDKTIGHFSFALTPLEQQALTAAHNKVSVCLSDVA
DNTAVKTLDVASVGDGNKIAIWNAVNGVPFNSNSQDYSDKNNSYLLRGSA
TENFYVNGKLVQVAPNGEFVLPVSLDEQNLVFTSDENGQNVLRQFTTYTP
KADFAWQHIDGSERSFGVSVYSIDAADPNDAIVQAAVPKGNNVKAFAKDY
FTGETYVGEVKDGVATFHIHTSINPDPQTGINRRALLQGWVEIDGPTYNA
KQVTDPTAISDRNYIGVYYKPDASSHVYSNRDELGVDDFTDEQADVSDFG
PSKFLYPGHNAPSDGNANISFDYVNDNNISTFGQEAVKAGYYDPIAKVFT
ITGHVDKDVVSLVALQDNPNEDAPENRVAIDKDGNFIIKFHMDDPSTRQL
TYIYKVKDSSTDKIDTVKGSITLILDTVLPTLHVDQLNGADNLTITTNNP
TFKISGNANDDLDDYSVYINGDNVFTQFNGSSFNYIPGMYGDPNQKTPNL
YGGYDFEQEVNLDDENGKPTTHIFNIELIDQVGNKVFKTLTVNYDPNATN
SEDPSNGTGDSGIEVVPTVPRKVQPLSDDNSTNINDKQTLSTELTITLPR
NIFAFDYQGKVARKHGKDIILKKGVVLYNPKEVNIRKHKYYKVSKNVYIK
VTSTRVNKKLKRLILIKNSYVYNLNGKANKVHNKRVLLKRGLAVDVLHGG
KITKVGKYDCYQIGINQYIKVANTALK
>LBA1816 hypothetical protein
MKLVHGFLVVLKSGVNGGKNMKNPMEGVGTHPDISPKDNEFMIKVRELVD
SDPDLLGNSDIMKLVKVALFRAGKNEPVHEIANELDDGLSGYLAKNDFKA
PAGVKKLQAELQKYIEV
>LBA1047 thiol peroxidase tpx
MKITFKGKEVKLVGTPPAVREEMPNFTVLDKNNQEFTKSDLLGKFSLISV
VPNINTPVCSIQTKTFNKAMDKFPEINFLTISTNTIEDQQTWCAAEDVKN
MKLMSDKNLSFGKATGLLIPEFGILARSVWVLDPNCKILYRELVDEITHE
PNYDAVLNELKQLH
>LBA0283 clpC, ATPase
MENSYSKSVNQVLEIAREQAQNFHHRLIGTEHILLALVIETDGEAGKILR
SWGLTPTAIREEIERYTGYGSAPKASYMEMSPRLSLALDYAKRQAEQGGY
KEIKTNHVLLGITASEQVLSAMILKNLSVDISRLRQDAIDSLEQDQDFND
SANWLGNSDSNQKKRKNSTTPTLDKVAINLNQRTREGNIDPVIGRDKEIE
RVIQILSRRTKNNPVLVGEPGVGKTAVAEAIATEIVKKRVPEDLLDKRVM
ALNMGNLVAGTKYRGEFEDRMKKILDEIAKDGKVILFVDEMHTLIGAGGA
EGAIDASNILKPSLARGDVQMIGATTFDEYQKYIEKDQALARRFQQVRLN
EPSKKDTLAILEGLKPKYEKFHHVTITEESLEDAVDLSSRYISDRFLPDK
AIDLVDEASAAVKIKNNVNSDDELVQINNKIKNLIDQKNEAAASQNFVKA
AQLQDEQNNLQARREKLVNTLHEKISANATVEPEDIAKVVSDWTGVPVTQ
MKRNETRQLANLEGILHKRVIGQDKAVSAVARAIRRSRSGIKDERRPIGS
FLFLGPTGVGKTELAKSVAAAMFGSEDNLIRLDMSEYMDQIASSKLIGSA
PGYVGYEEGGQLSEQVRRHPYSVVLLDEVEKAHPDVFNLLLQVLDEGFMT
DSKGRKVDFRNTIIIMTSNLGSRSLFDGNAVGFNADKIDQAKVRQAKVQQ
AIKQFFRPEFLNRIDETIVFDELTKKQLRNIVSLLTNKLVVRLQRKGITL
KLSRAALDKIVQDGYDPENGARPLKRAIQNDVEDKVAEMLINGEVKSGDT
LKIGSQHGNLKFEVVAPKKEVEKVK
>LBA0638 clpE, ATP-dependent Clp protease, ATP-binding subunit
MLCQNCHQRPAAIHLFTKVNGQSREIDLCQQCYQELRNQQGNLENMNNNN
EFFGDFDDLFNALNGNNNNAANNNNNMKNNDPRMQMGGGNGGQGGRSLLD
QYGTDLTALAKKGKIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGK
TAVVEGLAQEIVDGSVPAKLQNKRIISLNVVSLVQGTGIRGQFEQRMEQL
IRELQQNDDIILFIDEIHEIVGAGNAEGGMDAGNIIKPALARGELQLVGA
TTIKEYRDIEKDSALARRFQPVEVKEPSIDETIRILKGIQQRYEDYHHVQ
YSDDSIESAVKLSARYIQDRFLPDKAIDLLDEAGSRMNLTIPYIDKGKMQ
ERINAAEQLKEESLKNEDYEKAAYYRDQIEKYEKMKDQKVDPDKSPIITD
KIMNKIVEEKTGIPVGDIQKQEENQLQNLASDLKSNVIGQDKAVEKVARA
IRRNRIGFNKSGRPIGSFLFVGPTGVGKTELAKQLAKQMFGSEDAMIRFD
MSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQVRHNPYSLILLDEIEKAH
PDVLNLFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKNASVGFTA
ENDDESSESARNNMSQFFKPEFLNRLDDVIEFNELTKPDLLEIVDLMLQN
TNNMVKDQGLHIDVTSAAKNKLVEEGFNPALGARPLRRTIQEEIEDKVAD
YKLDHTESKNLKADVINDQIVISDETAQ
>LBA1910 clpE, ATP-dependent protease
MAYFDNDFDNLFNELNSSFFNDDFGSRRSDNNGNSGSIPMNYSSNMSSSP
RTIQQNPQQPNEKPIGVDLVEEAKNNKFDPVIGRDEQIDNVIEILSRRKK
NNPVLIGPAGVGKTSIVEGLAERIAAGNVPAKMANMHIISVNINDMVAGS
SLRGSFEERLKKVIDKAKSDPNIVLFIDELHNIVGAGSTDSENNNGDAAN
ILKPALASGELKLIGATTTSEFQRIEKDPALSRRFQAVQVPEPSTDVAIK
ILEGLKKKYEDYHHVKYTDDSLKLAVELSERYIQGRYLPDKAIDLMDEAG
AKKALLVQPTDEKSLKNQISALEAKKAEAAKAEDYDKAAEIKEKIASLES
QLKSVDSKNTPEVTAKDIYQIIEQKTKIPMSELHADEAQKNLDLAKKLKK
NVIDQDRAIDVITDAIARKQIFKDSDRPTGSFLLTGPTGVGKTELAKQLA
IQLFGNKEHLIRLDMSEYQDEMAVNKLIGSAPGYVGYGEGGQLTEKVRHQ
PYSLILFDEIEKANPQVFNALLQIMDDGRLTDAQGRTVSFKDTILIMTSN
AGFSDKLLEDGKVDQDKLISALENYFRPEFLNRLDAIVPFNSLTEQDMGK
IINIYLKKMSHVLAKKGVTVEVSDEAKEFLAEKGYDKKFGARPLRRVVEQ
NLETPAAKLILREPDTKKIEFTADDKHLYLNGKAIFDISPKVEEKVKEDE
AKAEGKKED
>LBA0694 clpP, ATP-dependent Clp protease P
MLVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFL
DAQDNTKDISLYINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMAS
ILLTSGTKGKRFALPNSTVLIHQPLGGAQGQQTDIQIAANEILKSRKKIN
EILHETTGQPLEKIQKDTERDNYLTAEEAKEYGLIDEIMVNKKSN
>LBA0847 clpX, ATP-dependent protease
MANQFTDQEEIKCAFCGKTQDQVKKMIAGNGVYICNECVDLAKKIIDDEL
RADSLKTASELPKPVEIKKQLDQYVIGQDRAKKVLSVAVYNHYKRISQMD
VDSSTELQKSNIAMIGPTGSGKTYLAQTLARILNVPFAIADATTLTEAGY
VGEDVENILLKLLQNADYDLERAQRGIIYIDEIDKISKKSENVSITRDVS
GEGVQQSLLKILEGTIASVPPQGGRKHPQQEMIKMDTTNILFIVGGAFDG
IEQIVKSRLGKKTIGFGAENEVNKVDADDWTRHLTTADLVKFGMIPEFIG
RIPIITTLDKLDNKDLVRVLTEPKNALVKQYKKLLSLDGVELKFTDGALK
AIADLAIQRNMGARGLRTIIENSIMDIMYETPSEEDIESVEVTKDVITRH
AQPRITRKNAEEVQVKANDN
>LBA1246 dnaJ, heat shock protein
MAQEDYYKVLGVDRDASDQEISKAYRKLAKKYHPDLNHEPGAEEKYKQVN
EAYEVLHDKQKRAQYDQFGSAGVNGQGGFGGAGQGFGGAGFDTSGFGDFG
DIFGDIFGQGARQQRVDPTQPQRGQDLDYTLTIDFMDAINGKKTQVSYTR
DETCETCGGNGCEKGTHPITCDKCHGTGVMTVTQQSMLGMIRRQTTCDKC
NGRGVIIEHPCKTCGGKGTVERKNTIEVDIPAGIDNGQQLRYQGQGEAGR
NGGPYGDLYISYRIKPSKDFERRGQNIYTEVPISFAQATLGDEITVKTVH
GDAKLTIPAGTQPNKKFTLRGQGVPYLRGNGNGDQITTVNIVIPKHINDK
QKEDLTNFVHDGGGNITPQEKGFFERLKDKLSGE
>LBA1247 dnaK, heat shock protein
MSKVIGIDLGTTNSAVAVLEGKEPKIITNPEGNRTTPSVVAFKDGEIQVG
EVAKRQAITNPNTIVSIKRHMGEADYKVKVGDKSYTPQEISAFILQYIKK
FSEDYLGEEVKDAVITVPAYFNDAQRQATKDAGKIAGLNVQRIINEPTAS
ALAYGLDKDDDDEKVLVYDLGGGTFDVSVLQLGDGVFQVLSTNGDTHLGG
DDFDNRIMDWLIKNFKDENGVDLSKDKMAMQRLKDASEKAKKDLSGVSST
HISLPFISAGESGPLHLEADLTRAKFDELTNDLVEKTKIPFDNALKDAGL
TVNDIDKVILNGGSTRIPAVQKAVKEWAGKEPDHSINPDEAVALGAAIQG
GVISGDVKDIVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQIFSTA
ADNQPAVDVHVLQGERPMAADDKTLGRFELTDIPPAPRGVPQIQVTFDID
KNGIVNVSAKDMGTGKEQKITIKSSSGLSDEEIKRMQKDAEEHAEEDKKR
KDEADLRNEVDQLIFTTEKTLKETKGKVSDEDTKKVQEALDDLKKAQKDN
NLDEMKEKKDALSKAAQDLAVKLYQQNGGAQGAAGQAGPQGGNPNDGNNG
GAQDGEFHKVDPNK
>LBA0278 ftsH, cell division protein
MKNNRNRLLSNGLFYIVVFLLLLWGINWALGGSNNSGSSENISYSQFVKD
LRQGKVKNFSVQPANGVYTVSGSYKTAQTAKNQSNSSFDFFSNNSSRKVS
SFSTTMLQNDSTVSNVQNLAQKSNARMTTQGESQSGNWISTIVMLVPTVL
FIVMLWMMMNQSGAGRGGSGGIMNFGRSHVKPEDPSKNKVRFSDVAGEEE
EKQELVEVVEFLKDPSKYTKLGARIPSGVLLEGPPGTGKTLLARAVAGEA
NVPFYSISGSDFVEMFVGVGASRVRDLFSNAKKNAPSIIFIDEIDAIGRR
RGNGTGGGNDEREQTLNQLLVEMDGFEGDEGVIVIAATNRSDVLDPALLR
PGRFDRKVLVGRPDVRGREAILKVHAKNKPLAPDVDLKEVARQTPGFVGA
DLANVLNEAALVAARRNGTEITASDIDEAEDRVIAGPAKKDRLIAEPERR
RVAFHEAGHSICGLVLSDSRTVRKVTIVPRGRAGGYNIMLPKDDQFILTK
NQLFEQIVGLMGGRAGEEATIGDKSTGASNDFEQATQIAHSMVVNYGMTE
SLGMVELEKEGESNPYGFKPYSEATAAKIDEAVKKILDEAHAKALEIVKE
NKEKHRIIAEALLKYETLDEKQIMSLYKTGKMPEKDETEYPSESKASTYE
EAKAAAEKREVEKAEKKDSDQALADQEKDALETPLEKNHEVEEHNPENPE
KDEKTNSNNDSSADDEQR
>LBA1248 grpE, cochaperonin, Hsp70 cofactor
MSKEEFPSEKNLDKEENTSKPKKAVKKEAAKGEETKKNNENQKLAKEIAD
LKEKNKDLEDKYLRSEAEIQNMQNRYTKERAQLIKYESQSLAKDVLPAMD
NLERALSVEADDDVSKQLKKGVQMTLDALVKAMKDHGVVEIEADGVKFDP
TLHQAVQTVAAENDDQKDHVVQVLQKGYQYKDRTLRPAMVVVAQ
>LBA0985 hslU, ATP dependant protease, ATP binding unit, heatshock protein
MAIKTPKEIVKILNEYIIGQDEAKKSVAIALYNRYRRMQLPKQMQREITP
KNLLMAGPTGVGKTEIARRLATIVEAPFVKVEATKFTEVGYVGRDVESMV
RDLVGEAVRMEEKDQFARVKPQATKEANKELVRLLAPGEKREKRENQVQQ
MQDMMSMLMGGMNNQTNNNQEEISEEVRNQRMDVAEKLNKDLLEDREVTI
EVEQAPKANPMSDMMGQMGMDMGSMLNDIMPKKKVKRTLPVREAREVLIQ
EESRKLVDYDTIYQRAIERSQNNGIIFIDEIDKIIAGNKRNSGEVSREGV
QRDILPIVEGSTVNTKYGPVSTDHILFIAAGAFAESKPSDLIPELQGRFP
IRVELNALTKDDFVKILKDPQNSLLKQYIALLKADGIKLIFTQEAVDKIA
EIAFDVNQGTDNIGARRLSTILEKLLEDVLYEGPDMEMGEITITEAYVEE
KLGDIIMNKDLTKFIL
>LBA0984 hslV, ATP-dependent heat shock protease
MTTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAG
GVADAVSLQDMLEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAF
DDKDLLLISGNGEVLEPDENVVAIGSGGNFAQAAAIAMTRHAKEMKADEI
AHEAVKIASGIDVFTDDHIVTDEI
>LBA0096 htpX, putative heat shock protease
MLYQQIARNKRKTALIMVLFVVILTLVGAGLGYLFSNSPWTGIIIALAGS
LIYLLIMWQNPANMIMSLNHAQEIQEADNPELWHIVEDMAMVARVPMPRV
FIIPDPSPNAFATGRDPEHSAVAVTQGILELMNREELEGVLGHELSHVRN
YDILLSTIGVVLVGVISFISGIASRYIWFFGGNRRDDEDRDTNAFEIIFK
VIAIVFVLILGPISASLAQMALSRNREYLADASSVELTRNPQGLISALRK
IEGSQPMRQADRSSAGLYIENPFHNHGLSHLFDTHPPTEDRIKRLEHM
>LBA0083 htrA, putative heat shock related serine protease
MILGNMRGELSMVENQNNNQRPRKNSNAKIITTAAIVGVVGGLIGGGVSY
YAADQMNNATDTTTAQTSVSSNSSKVSEKSAKTSGTMTTAYNDVKGAVVS
VINLKRQSSSSSANSLYSSLFGDDSDSSSGKSGKLETYSEGSSVVYMKSN
GKGYIVTNNHVISGSDAVQVQLANGKTVSAKVVGKDSTTDLAVLSIDAKY
VTQTAEFGDSKSLQAGQTVIAVGSPLGSEYASTVTQGIISAPARTISTSS
GNQQTVIQTDAAINPGNSGGALVNSAGQVIGINSMKLAQSSDGTSVEGMG
FAIPSNEVVTIVNELVKKGKITRPQLGVRVVALEGIPEAYRSRLKIKSNL
KSGIYVASINKNSSAANAGMKSGDVITKVDGKKVDDVASLHSILYSHKVG
DTVNITINRNGRDVNLKVKLEGN
>LBA0642 mecA, negative regulator genetic competence
MQVDHINENTIRVRINKDELARRGLRVLDLLGDKEKIQKFFYSILSEVDT
DHTFTKGVPVTFQVMPNNGGLDLMITKVKPDEANNLRQMMSGLGDDDNQT
QEEPDSRRSFFDLDPKDDLDAQLDQDDEDKDLDANEDASDIEYWKFQKRH
AYSFDELGDLIELADNLKVSDLASSLYYQRGKYYLELAFLDENYAELKPA
DAWAIANEYGIKIDNEEMNTVKETGKCILNQDALGHIRYYFLKQMN
>LBA1208 msrA, peptide methionine sulfoxide reductase
MSENNKHIKATDIKENPKYDTAIFAGGCFWCMVEPFDNITGVEEIISGYT
GGHTINPTYADVCTGKTGHTEAVKITYDPGKISYNQLLNYYWQVTDPTDA
MGQFQDRGDNYRPVIFYNSQFQKEAAEKSKQELANSGKFDKPIVTSIEKA
MPFYPAEDYHQDFYKKDPERYALEESGGRSDFIKKHWSK
>LBA1374 msrA, peptide methionine sulfoxide reductase
MVLDESKKKQALKKLTQEEYDVTQNAATEYPFTGKYDNFYEKGIYVDVVS
GEPLFSSQDKYDAGCGWPSFTKPIEKLQYHRDQSHGMERTEVVSPEAQSH
LGHVFTDGPVDRGGLRYCINSAALKFIPYDQLNEAGYGEYKKLFK
>LBA1275 pepO, neutral endopeptidase
MRRYFAVRGGAGDVAEPDVNAKPQDNLYLAVNSEWLSKAEIPADRISTGV
NSELDIKIEKRMMKDFADIASGKEKMPDIKDFDKAIALYKIAKNFEKRDA
EEANPIQKDLQKLLSLGSFVELVKQAKDLFMGPYVFPFVFDVDADMKNTD
VNALYFGGPSTFLPDTTTYKTDDAKKLLDVLQDQSINLLMMAGIGKTEAR
MYVDNALAFDAKIAKVVKSTEEWADYAAIYNPVSYDEFISKFKSFKMDEF
LGKILPEKPESVIVMEPRFLDYAEELINADNFAEIKGWLLVKYINSVAKY
LSQKFREASFPFAHAISGIPELPSQIKQAYRVANGAFDEVVGIFYGKKYF
GEKAKHDVEDMIHNMLKVYEERIGSNDWLSEDTKKQAIIKLKALVLKIGY
PEKIEKIFDLLQVDSEKSLYENEAAMDKVRTKYMLDKLTKPVDRSVWLMP
GNLNNACYDPQRNDLTFPAGILQAPFYDINQSRGANYGGIGATIGHEVSH
AFDNEGAKFDEHGNMNNWWTKEDFEEFNKRVGKMVDIFDGLQYGPAKING
KQVVSENIADLAGLACAVQTGKNDGVDLKDLFENYARSWMEKQRPEAIKT
EVQTDVHAPQPTRVNIPVQCQDEFYEAFGVKDTDGMWLDPKDRITIW
>LBA0165 pepO, neutral endopeptidase
MSNKVTVRGGAGNILEPKVGTRPQDNLYLAVNSDWLEKAKIPSDRSRIAS
FDSIDLNVEKSLMKDFADFADGKKEVADVPNLKKAVELYKLARDFKRRDE
DGAKPIQADLFLLESISDFADFNLKAADLFKASFSLPFGLDIDADMKNTK
INVLQFIGPSTFLPDTTTYKTEAAGKLLEVLKKQSINLLKMAGVSEGQAK
EYVEDALKFDKKLSEVVKSSEEWADYPAMYNPTSMEDFEGKIKNFKIDYF
LKEALGEVPDRIIVTEPRFLKHFDELMNEENFDEIKGWMIVKFINNVASY
LSQDFREASFQFSQALTGQPELQSQEKQAYHLANGLFSEVVGVYYGQTYF
GEEAKKDVLTMIRQMIDVYEKRIKENSWLSEETKEKAIVKLRALILKIGY
PDKIEEIYNRYNITPASEGGSLYSNVRAADIEQVKYNVEKLHKPVDRSVW
LMPANLVNACYDPQRNDLTFPAAILQAPFYDLKQDRAENFGGIGTVIAHE
ISHAFDNNGAQFDEFGNMKNWWTEEDFAEFKKRTQAEIDLFDGIKYGPVT
LNGKQIVSENIADQGGLTAAIKAAKDEGDDLKKLFENFARIWANKQLTES
IKTQVSFDVHAPGPERANVQSQCQEDFYEVFDVKETDGMWLDPEKRVVIW
>LBA1588 prtM, PrtM precursor
MKSYMKKVAAVVAVAGVALSTAACSNSGSNSTVASYKGGKITQQQYYDEM
KKSQAGKSTLANMIINRALEQQYGKYVSSKKVDKQYNNYKKQYGSQFSAV
LQQNGMTASSFKENLKTNLLSEQALKHIKKITKKQEQQAWKSYQPKVTVQ
HILVAKKSTAQDIIKQLKDGKSFSSLAKKYSLDTATKNKAGKLPSFDSTD
NTLDSAFKTAAFKLKTGEVTSTPVKSQSGYHVIKMINHPAKGKFADHKKA
IDDEIYASMAQDQSTMKDVIATVLKRADVSIKDSDLKDVLSAYVSTGATK
>LBA0346 radA, DNA repair protein
MARVKTQYKCRSCGYISASYLGRCPNCGAWNQFEKETEEVQKRSTKATAS
RLIQKTGVNEPVKLDKIKAEKEERISTKSEELNRVLGGGIVPGSLVLIGG
DPGIGKSTLMLQIMSDLAEKHKVLYVSGEESANQIKLRADRLGIGQSNML
LYPESDMHDIREQINDVKPDFVVIDSIQTMNEPSLDSMTGSASQVREVTS
ELMKIAKMDAITVFVIGHVTKEGAIAGPKIMEHMVDTVLYFEGDEHHTYR
ILHSVKNRFGAANEIGMFEMVNEGLKEVTNPSAIFLDQRLPNSTGSAVVV
SLEGTRPLLAEIQALVTPTAFGYAKRTTSGIDYNRAALLLAVLEKRGNLM
LQNQDVYLTATGGIKLNEPAIDLAIAMSVASSYTDKEISPTDCFVGEVGL
TGEIRRVDKIEARVKEAAKVGFKRIFIPKHNMYQGLTNNGIEVIPVSSIP
QALKLVFN
>LBA0027 repB, putative replication initiator protein
MKKAVRARQFMYTQDIEHLPFKQEDLKELLEKSNAEQWAYILHDKDVNEK
GEPIRPHFHVILKFKDAKTISRIAKLFNDQQQYVEVWHNTINNGYSYLIH
ETTNAKNKHHYDPSEVVASFDFVTRIKQIREKVNKPSRHDIENFIDDYSN
EQLTKEELQEKIGVLEMAKHKTLLDHIEDILAYKKHQRFLKDFKGQKCTT
YWIWGSSGIGKTKLVREVLEELHPNNFIILGSQRDHFQEYKGQEFIVIND
LRPNDYDYGQLLTLLDPWEIDKMAPARYHDRYLNARSIYITTPYDPLSFY
FECNISNQVVDSF
>LBA0483 repB, putative replication initiator protein
MCVINFRKKRMKEKGKKIVRARQFTYVQDTDHLKVEPKQFQDFLSKSGAV
EWAYILHDKDADQNNKIRDHYHVVLKYANPQTISKIANIFKDKEQYVQIW
NGRIDNAYSYLIHETSDAQNKYRYSPKEVVASFNFEKRIEKIRTSIKRKS
SFKNDIEEKLKDYAENIISLYELRKSIGDYAFTTPSIQRHIKEIKKLHDE
DNHQKWLRSFDGKKMKVIWLYGEGGTGKTRCARAMTKDDDVVVLGSSNDY
FQAYDGQRVIIINDLRPSDFKFGDLLKLLDPYEHSKEAPRRYRNVKLNLE
KIIITTPYSPISFYNHCYIEDKKIDKIEQLTRRITQTIEVTNEFTKKFLK
EHERDEKSDS
>LBA0679 trxB, thioredoxin reductase
MADKYDVIVIGAGPGGMTAALYATRANLNVLVLDRGPYGGQMNNTDAIDN
YPGFTEVKGPELSQKMYDTLMKFEPDYKYGNVQSVELDGDEKVIKTDDEE
YRAPVLIIATGADHRHLNVPGEEEYSGRGVSYCAVCDAAFFKDEDVVVVG
GGDSAIEEGIYLSQMAKSVTVIHRRDQLRAQPTLQKRAFANEKMKFIWNA
QTEEILGDGNRVTGVKYLDKENGETKEVSAAGVFIYVGVLPQTEPFKKLG
ILNEQGWIPTNEHMETKVSGIFALGDVRDKDLRQIANAVGEGSVAGQAAY
NYFQDLKN
>LBA1898 trxR, thioredoxin reductase
MKKYDVAIIGAGPGGMAAALYAARANLTVAMIDRGVYGGQMNNTAEVENY
PGFPSILGPELGEKMYQNTVKQGVNFVYGDVQGIEVKDDKRIVKLGSEDS
DIETKAVIIGTGSSNRKLGVPGEDEYSGKGVSYCAVCDGAFFKNENVVVV
GGGDSAVSEGLYLANVTDNVNVIHRRDQLRAEQVLQKRAFKNPKMDFTWD
SEVKEIIGDENKMTGVKVHNKKTGKDETIDANGAFIYIGNIPNSEPFRDL
NITDKDGWILTNDQMETEVPGIFAIGDVRKKKLRQIITAVNDGGIAGQNA
YEYIQKLTEN