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# Silicibacter pomeroyi DSS-3, DSS-3

>SPO3461 flagellar protein FlgJ, putative
MDISTTVPIEPRSGKATSPDSALRAVAVELEATFLAEMLKASGLGKARDA
FGGGAGEEQFSSFLVRQQADQLAKSGGIGLAESLFNALKESQNGQ
>SPO3171 OmpA domain protein
MALSRRTGHRFQGSVWPGFVDAMTGLLMVLTFVLTIFMVVQFVLRETISG
QEDELDALAGEVGRLAQALGLEERANSQLQARLGALNATLNDTQDDLSQA
QALIAALTVERDRSRAALDEAATRITAFEAQVAALLADRDRALGDVAALE
DERGRLLSQQEALNLALAQARDEIDDRAEAARLAAARREALEAMIADLRR
SGEENAAQIGTLKQQLSEEEAARLAEAAAAQALREKLENADAELTAMTLA
LEAQRREAEDTLTLLAAADAAREQLNAKLAEALDQIEAARAQARERDELA
ERLTRVLGQMEVARSEDAARVSALEAELDRIRAEGGETRAALAAARAHAE
ETQSALEAALAQQRAATVATRSQYQDELDRLQSEHAAARAALEAELAKAR
AEADTTRTDLEARLARGEAEAASVRAGLEAELARARADLSAARAAADSTA
EDRASVEARLLMALESLERAQAAASDNEVLQRRLLAALDAQTEAESSAAR
QRSLAEERAALLAQARAALSEEQAVSTEAQRQTALLNQQVAALRNQLGSL
QALLDDYKARNASAEVQLQSLGQDLNAALARAASEERKRRLLEEAERKRL
EEEARVLAEQAKDLERYRSEFFGRLRDVLGNQEGVRIEGDRFVFSSEVLF
DPGSADLSPEGQFEIAKVARILRAIAADIPPEINWVIRVDGHTDNVPLLG
TGKYADNWELSQGRALSVVRYMVESLGLPPDRLSANGFGEYQPVNPADTA
EARAQNRRIELKLTEK
>SPO2721 hypothetical protein
MEIEMTDDPTNPKKSMTPHRLNMNDEMSTSITNAIDQLATDGSLYTRWRL
RGVRSREALKLAESALKESMAAKNRTFVVAVGLAEDLARKLLLSDALRNT
EAVEREITHTINDALRNFEGLVTQREQAAYMVELERIAEAQRLLDAGKLS
QQRFEQLVKSINDSTDKIVLGVHETTREILANLRARFNSALRQLGEAA
>SPO3852 hypothetical protein
MSNGIRYLKIFRFERDSAVAEKKDPELETVTDPMSETKQELPEPAVDEAK
AATEAPSEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAE
AEAEAATPPETAPQPAPTETRRGGFAPALIGGIVAAVLGFLAGRADLIDP
LLPPGLRASDGAEAIAALQSKLDQQQAALSALKSDIGKIEMPDISGLSAQ
LGDLSAQLAPLATTAEDLSARTDSQAQALSALTARLSELEARPVAEGASP
EVVAAYEAELSRTREVLAAQRAEVEQMVADAQTLKATAAADAQRAANRGT
LAQLRGQLEAGAAYAEPLAALTAAGIDIPVALSGPAADGVASLAVLRDTF
PPAARAALADLRQETRGTGLLAFLERQTGARSVTPRAGDDPDAVLSRAEA
AVTSGDLATALDLVAALPEAAQAALADWVAQASSRHQAIAAADALAQSLN
SN
>SPO0192 flagellar hook protein FlgE, putative
MTISSSLNAGVAALSANASRLATISDNIANSSTYGYKRVETDFHALVNAS
GRGKYTAGGVRTTTQRLIDQRGSLVSTSNSTDLAVRGRGMLPVMRSSQLA
LPQQDMLLATTGSFRTDDEGYLKSEAGLVLMGWRANPDGSIPNLPRDTSD
GLVPVQLSVNQLSGAPTTEMVLRMNLPATATEAGSAGDTQPLSVEYFDNL
GKSENVQIELVPTVPATGESNEWTMILRDTASGGAVVGEYTLTFSDARTD
GGTLASVTATTGGAYDATTGSVVINVAGGPMEINIGQLGASDGITQLSDT
FAPVSITKDGTAVGTMSRVEVDENGFVYAFFDNGVSRRVFQIPLVDMPNP
NGLVALDSQTYEPSRESGTFFLWDAGDGPTGDLVSFAREESTTDVATELT
AMIQTQRAYSSSAKVIQTVDEMLQETTNIKR
>SPO3458 flagellar protein FlaF, putative
MNALLQARQAYSAASAPTRTPRNMEYEVLSRITHRMHSAAKRGRAGFGEL
VEALHENNRLWGVLAANVAEGENALPPDLRARLFYLAEFTQVHTSKVLRR
EASPRPLLEINTAVLRGLRQGGARE
>SPO0201 conserved domain protein
MELIADILLVAGALGAGLYCFVLGRRLKRFNDLERGVGGAVAVLSSQVDE
LNRTLAAAREASDNSGAALGDLTGRAEAVAQRLELMMASMHDVAPAQEVS
APPEVVRQEPKPARPDEAKPAPAGVMFMRHDRGNSGTTP
>SPO3459 flagellin protein
MSSILTNNGAMVALQTLKSVNMNLGQTQNAISTGKNVATAKDNSAVWAIS
KVMESDVKGFKAIKDSLSLGESTVAVARNAAETVTDLLTQMKGKIVAAQE
DNVDRNKINADVTALKDQISAVVGAAQFNGLNLVDGTAASASVLSSLDRD
NAGNVTASSITVTGQNLSTGGYTAKAVFDATNTDGVSADGQDTFGFSLDA
NGGTDDNGQIEFEPQGTAAYAAGDSFTIRLGDTEVNYTVTAEDIASTSQA
DVIAVGMKAAIEASGANVTVDYNAANSGRLVITNDGTDSLQVSGQFSNAN
SGGLGALAAIDVSNSAGAAAALGSIETLIDTSIDAAAAFGSVQGRIETQK
TFISNLTDSLKSGIGSMVDADMEEVSARLQALQVQQQLAVQSLSIANQAP
QSILSLFR
>SPO0193 flagellar hook-associated protein FlgK, putative
MTISAALNSALSGLTAASRATGVASDNIANALTPGYARRSLEVAGNTIGG
AGVRILGVVRNSDPVLLASRRGADAAQGYADGVSGFHTRMARLVGNVNDP
RSVPNLIAEFESSLIAAASTPSVQTRLDAVATAASELATALNAASNGLRE
ARNDADRSIGQQVDRLNTVLQNVETLNGRIQSVKLSGGDSAPLLDQRQKL
IDEVNTMIPVNVVARDHGSVALFTDGGAILLDGPAAQLSFTPTLQTMPHM
TLENGLLSGLELNGMPLRLSGPTSAIRGGSLAAAFEVRDDLAIEAQQDLD
AVARDLIERFEAPGLDPTAAPTDAGLFTDNGARFSASAQTGLAGRLKLNA
SVDPGQGGQSWRLRDGLGAAVPGAVGNAQQINAFHQALTATRTPSDPRFG
TGDMTANQVGAALLSRVAQNESLATERLTFASASRTEMQKLELEQGVDTD
VELQMLMQIEQAYAANARMIETVGEMMDTLLRL
>SPO0180 flagellar hook-basal body complex protein FliE, putative
MDIRSLSAAQAYASARPATQADPKDDSATQGLRGTFQDFAATLQHSEELA
QSAMIGKADPHALVQALAQSELAVETAVTVRNKVVEAYQEILRMPV
>SPO3092 type II/IV secretion system protein, TadC subfamily
MEFLNQINDFLTGHLGEFGPLIAVGVLGLFMVLLAVPLLMSQPEDPLKKL
KREMNPNTLAKPKKEQLRQSGRNEQLQRFANFLEPQDADELSAMQLKLRQ
AGYQSKDAVRFFHFAQMALGLVGLVLGVLYVFVIEADKDLDGQAMLIRVL
GPGGAAYFLPRYWITRRVDTRKENITRAFPDALDMLLVCVEAGQSLDQSI
VRVSKELRASYPDLADEFEMVAYEMKAGKEKDKVLRDMGTRCGVVDVSSF
VTVMIQSSQFGTSIAEALRVYAGEMRDKRVMRAEEAANKLPTKMTLATMM
LTVPPLLIILVGPSAKGIMDLGNMSN
>SPO0176 flgA, flagellar basal-body P-ring formation protein FlgA
MRYLGPILALVLAQTAAAEVLVPTRTIRAKEIIGAEDLMLKSAEVPGSFT
DPAEVIGQEARVALYAGRPIRYADIGPPAIVDRNDLVTLFFDNGPLVITT
EGRALGRGAAGDVIRVMNLTSRTTVSGQIRPNGSIEVK
>SPO0182 flgB, flagellar basal-body rod protein; FlgB
MKLIEGEAPMFSDLNVFKMAYAMATHAGTRQAVIAQNMANADTPGYRERD
IAPFAETFARETAGTAMQASRTSHLNGTAASAASWAPFETNAAGDPNRNN
VSIEEQMLKAVEVKRQHDRALAIYKSSMNMLRVGLGRG
>SPO0181 flgC, flagellar basal-body rod protein FlgC
MREAEMSEFSKSLSVTASALRAQATRLRHVSENISNADTPGYRRKTVPFE
VERGRDDGVERVTTGRVKLDRRQLPDIFDPSHPLADETGHYQGSNVDLMI
EIADAREAQRSYEANLKLFDQARQMSASLMELLRK
>SPO3463 flgD, basal-body rod modification protein FlgD
MVETVHSTRPGATSQAPQTTTPEKRSLSSDFDTFIRMLTTQAKYQNPLEP
LDSSEYAAQLAQFSMVEQQTKTNDTLTALVEKLGATDMAKLSNWIGKEVR
AVAPANFDGTPVTISPAPLAAADKAFLVVRDAKGETVERYQVPVSADPIS
WSGLNDDGEPRDNGLYSFAVQSYKADELLLEEAAAVYHPVSEAQIENGEV
ILILEGGQAILANMVTGVRANG
>SPO0178 flgF, flagellar basal-body rod protein FlgF
MANNIANSATSGYRQQGLVFSEFVRGGLGTSSLSMARGQVRNTSQEQGVL
TQTGGDFDLAIDGEGFFMLETPGGERLTRAGSFTPNAQGDLVNPDGYRLI
DANGAPIFVPPDIDGVRIGPDGTISGAGRLLGQIGLFKPVDPHGLIREGG
VFFRADDGTEPIEGASIMQGFLEGSNVNAIDQVARLVEVQRAYELGQSFL
QAEDERIRNAVNSLLR
>SPO0177 flgG, flagellar basal-body rod protein FlgG
MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFADLHYQQIAR
AGTVNASDGTVLPTGVQLGLGVRPAAVTVHLEQGALSATGNDLDLAIEGR
GYFEVTLPSGQSAFTRDGSLKRSAEGLIVTSDGLSVVPEITIPSDARSIS
INAAGEVYAYFDDAAEGQLLGQVTLAGFTNAKGLEAIGSNLFKETEASGS
PITGNPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGYEMNAKVISAV
DQMMSATTQVR
>SPO0175 flgH, flagellar L-ring protein FlgH
MMQKCLSPKTLIAALVVLSACGRADHLGKAPSFTPNTESPEHVAMLWPGL
PLHTQPQRSVDRASLWSGGQNSLLGDQRAMKKGDILTVVIEIDEKAEISN
DTNRSRSGSESLGVPHLLGLPQRIDEKLPEGASMSNAVAVDSSSASGGKG
SVKRKEKLTLRVAATVVDVLPNGVLSITGSQELRVNFELRELLVSGYVRP
EDISRQNEITYDKIASARVSYGGRGQITDVQQPRYGQQVLDMVLPF
>SPO0195 flgI, flagellar P-ring protein FlgI
MTLIRLLACLLFLPCLAQAGAVRLKDLVEFDGVRGNDLVGYGLVVGLNGT
GDGLRNAPFTEEIMSNILERLGVNVTGEDFRPKNVAAVFVTAALPPFARV
GSQIDITVSAIGDSKSLLGGTLIMTPLNAADGQIYAVAQGTVLAGGASAE
GQAASVVQGVPTSGVIPAGARVEREIEFDLGSLTQLRLALREPDFTTAGR
IETAVNSAFNGRVAVMRDSGTVELDIAATQARSPAHVIGRIENILVEPER
KARVVVDQRSGTIVMGADVRISRVAVSQGSLTLRVEEAPIAVQPNPFADG
DTVVVPRTNAEIEQEPGIKLAEVPESASLSDVVAGLNALGVSPRDMIDIL
KTIKAAGALHAEFVVR
>SPO0170 flhA, flagellar biosynthesis protein FlhA
MPKLTTETLFSPTVLLAIALMAIIVMMILPMPAWVLDIGLAASFALAILI
FTLTLFIERPLDFSAFPTILLASLMLRLSLNVSSTKLIIGQGHTGPNAAG
DVIEGFAQFVMGGSVFLGLVVFGVLLIVNFMVITKGAARMAEVGARFALD
GMPGKQLAIDSDMSAGAIDHQEAKARRELEQQETTFFGSLDGASKFVKGD
AIAGLLITLLNLVMGLIMGVVVHGMPMSAAFETYAILTVGDGLVSQIPAV
IISIASALLLARGGTQGATDNALFAQLGKHPAALATVALLMVLFALVPGL
PFLPFISGGAVLGYAAWRMRLKQKQEAESAARITEEQTPVARQGIGDILD
LDDVHLEFAPDLVGMALDPGTGLDARIANMRTHVASIYGLILPDIRLTDQ
AELPQGTYVIKVQGVEQVRGVLHPDLVLALMTDHPDALPAGEDVTEPVYG
APARWILPKDQEAAALSGATIVSPPEILATHLLEVIKQNFARLLTLKSLR
RLLSEMTRLSDPVRSEANQKLLDELIPDKVPIDTLHAVLRLLLEERVSIR
NMPLILEAVAEARLATTQPEAICEHVRQRLGFQLVAEMKRADGSIPLVQL
APEWEDAFATYQVDGAGGGLDIALPPDLFNKLADGVAKRLSQTAGQGIFA
ALVTSTRRRRFLRTILRARGIPNPVLSFEEIGMEARPALVGQVPA
>SPO0172 flhB, flagellar biosynthetic protein FlhB
MSGQDDDSDKSYEPTPQKLQKAREKGEVAKSADLSVVAAYAGLLLALSAL
GAASITKLGTALTVLIGQADGLSRLVFEGRAVGPVGGLMGTVGASILPWF
LVPAAAVILSVVAQRAFVMAPSKLVPKISRISILQNAKNKFGRGGLFEFA
KSFVKLLLYSVCLGFFIKLNLSDIVSSAGMEARQSVLLMARLLMRFMFLV
ATVALVIGAIDYLWQHAEHIRKNMMSRKELMDETKDAEGDPHMKQKRRQK
GQEIAMNQMLADVPGADVVIVNPTHYAVALKWSRLPGAAPVCVAKGVDEV
AAAIRRSAAEAGVPIHSDPPTARALHAGVEIGQEISEEHYRPVAAAIRFA
EAMRKRAKGRAW
>SPO0199 fliF, flagellar M-ring protein FliF
MQQIRSVWASLDKKKQFIVIGAALVVFLGVLGLTRMAGSPNMQLLYAGLE
SGSAGEVVRSLEQQGVPYEVRGGSIYVPAARRDELRLTLASEGLPANGGR
GYELLDSLSGFGTTSQMFDAAYWRAKEGELARTIVASPHVAQARVHIANS
SSNPFQRSIEPTASVSVVPSGSEVTPAQANAIRYLVASAVSGMVAEGVTV
VDSNGNVIGTPETPTSSTSEDRAQQMRERVLRLVEARVGRGNAIVEVSLD
TVTETESIRERRFDPNGRVAISTDVEERSDASKNQTTDVTVASNLPDGDG
AVGDESNSSTSATRERVNYEVSETETEILRTPGAIKRLSVAVLVNGLPGA
AQDGSSQFTPRPEEELAALRELVESAVGFNQDRGDVITLKSMELPNLEPQ
GTLASSSMLQGLTFDLMSLIQMATLALVTLVLGLFVVRPILTKPAVSAPL
LAVAPPPNQSGAQSAGPALTGEIDDGSPRQNQLPGAATQQRGTVPALVGS
SGTPVDRLRAMIGDKQEETVEILRSWLEENEEKA
>SPO2308 fliG, flagellar motor switch protein FliG
MGGQPVADAPRRVPRQLSNLEKAAVVVRLLLNAGAEIPLEELPEELQARL
TKQMGQMGLVDRITLDAVAEEFAEALDGIGLSFPHGLAGALSAMDGKIAA
TTAARLRREAGVRQMGDPWQRLRALPPEELAEIAQAESTEVAAVLLSKLD
TAKAAALLGQLPGPVARRITYAISQTGRVTPEAVDRIGWSLAAQLDARPI
LAFADRPEKRVGNILNQSAPATRDQMMSALDEEDATFASSVRKVLFTFTD
IPARLSPRDVPAVVRVADQDQLILALAAATEGDEAAVAEFLLANMSTRMA
DNLRDEIRDKGKVKRSEGEAAMTALVGVIRGLADDGTLQLIDPDEDSED
>SPO0183 fliI, H+-transporting two-sector ATPase, flagellum-specific
MTAPDPLALKAEFDSLSLVRHVGRVTGVAGGVIQIQGLARQAQIGDRVEL
KRNFGPSLGGEVLQVEGSTINMLPDSAPEGVSLGNRVVLHPIPGFAPGRH
WLGRVVDPFGRPLDGRPLMRGSKARDLMRAPPPAVQRKPLGQRMATGLAA
LNTLLPIVRGQRVGLFAGSGVGKSSLLATLAKSMQADAVVVALIGERGRE
VNEFVAKALGPEGLARSVIVAATSDQSALVRRRCAWAAMTVAESLRDEGL
NVLYLADSITRFAEAHREISAAMGEAPALRGYPPSVTPLITGLCERAGPG
TEKQGDITGVFSVLVAGSDMDEPVADILRGVLDGHIVLNREIAERGRFPA
IDISRSVSRSLPDAATPEQNALIGEARRLIGAYEQSEVMIKAGLYSEGAD
PLLDQAVRVWPELDAFLARLDPQGIEHSFSRLQLVLRRSKSGPRH
>SPO0200 fliL, flagellar basal body-associated protein FliL
MTDATADEVEPEKKSGKKGLIVGLVLALVGAGGGFYATVSGLIPLGAQPA
EEHGESGGDHGAVVPDALPNVAYVDLQPIMVSLLGEGGQRHLRFHAQLEV
PEQYLADVEKIRPRIVDVLNGYLRAIEISDLSDPLALTRLRGHMQRRINI
VAGEGRVKDVLVMEFVLN
>SPO0197 fliN, flagellar motor switch protein FliN
MRWTPSCIRPKRYRDMSDPQKPIEAKNPFNSVPIEITVSVGRARPLIRDL
IGLGENAVLTLDKRVEDPVDLYVGDRLVARGQLEELTGEQAGQLAVRLTE
ISDLASDLG
>SPO0196 fliP, flagellar biosynthetic protein FliP
MRRAAPVLAAITLLTGAMLAGPVAAQDISLSLGEGGSVSARTIQLILLIT
VLSLAPGLAIMITCFPFLVTVLAILRQGIGLQQSPPNMLIVSLALFLTYF
VMEPVFTEAWTTGIAPMMAEELALEPALEKAIAPFKAFMAARLDADTFFA
MANLRPDGAALTATPEAPLSVLVPSFMLSEIARAFQIGFLVFLPFLIIDL
VVAAVLMSMGMMMVPPATVSLPFKLAFFVLADGWSLIASALVRSYMP
>SPO0179 fliQ, flagellar biosynthetic protein FliQ
MMSEGLFYDTVRQGLWIAVITSVPILSVALIAGLAVGLFQALTSIQEMTL
TFVPKLAAIVIVFWISMGFMTQTLVNYFTTTLIPLISGGV
>SPO0171 fliR, flagellar biosynthetic protein FliR
MIALPPELLALISGELWQLFAVFLRVSALVSVLPAFGEQSIPMRVRLGVA
AAFAVIVAPATPQAPEITNVLQFAMLAGTEALAGLVMGLGIRLFAMALQV
AGMIAAQATSLSQLLGNAVAEPTPAMGHLLMMDGLALAVMSGLHVRVAEF
LIHSYTIFPIGKLPHPGDLSQWGVAQIGRMFALAFALAAPFVIASLIYNL
ALGAINRAMPQLMVAFVGAPVITFGGMALLLVGTPLLLSVWLDALWSFFQ
DPVGARP
>SPO0203 motA, chemotaxis protein MotA
MIGILGIVVIFVMVFGGYLAAGGKMTIILKSLPFEMMMIGGAATGAFLIS
NDMGGVKHTLKDVGKVFKGPKWKPEDYRDLLCLLFSLIRIARQNPVEVEQ
HIEDPASSALFSKYPRIQADHEAVDLICDTMRSASMNYDDPHQVEEVLEK
RMEANLHHAMHSSHALQTVADGLPALGIVAAVLGVIKTMGSIDQPPEVLG
RLIGGALVGTFLGVFLAYGLVGPFASKVKAVVEEDNHFYLLIKEVLVANL
HNHNPAMCIEVGRQNTPSHIRPGFTDLEQALKDLKQDAA
>SPO0191 motB, chemotaxis protein MotB
MIMKVVEMGAHTNAAPIIIKKKKSGGGDGHHGGAWKVAYADFVTAMMAFF
MLMWLLNATTEKQRKGLADYFSDSIPINPVSGGGDGSFGGDSMFSENAMV
TTGTGGVNRRRADADRSRGSTGVDRQGGEGEPLEEFKTLEAALQGRGGES
LVSEQLRKHIVTRVTDEGLIVELISTDESPLFETNSDRPTQLMKELAKVV
VRAADMVSNGIAVGGHIRAHPVVLARNPVWELSTARAERTRVLFEGLGMK
EERIQRVTGHADRKLTDPNPMAARNDRIEIIFLRS