Gene list
Applied filters:
COG category: Cell wall/membrane biogenesis
Gene type: CDS
Genomic element: chromosome II
Number of genes found: 22
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Pseudoalteromonas haloplanktis TAC125, TAC125 >PSHAb0242 putative transglycosylase MRHFSLFLPLLCTFTVTNISANTFTEFKKQQLLEATSFSKQYKQDYANFR EAYLADYDSFRDSLLKHWSVPIQSSTLKQVVYSADLKSRIIIDEQSMTVT VETLDSHSTLGQAAETLITDKNLASSLELISPTKQELENSLAISKSEIKS QKELKQNQETLAQEITTQYEQSLSSVDKNTQLKPQQAIQSKQQLAIEKQQ RIEKLNTSLSTKDNDVTYKNITSRTFSLPDEYLHKKVSPYLNFYLQYEQQ QLPLLLAISHAESSFNPNAKSHIPAFGLMQIVPNSAGLDVARKHFKKDIA PTPEELFDPDTNITYGSAYISILDKSYLRKIKDPISRKYCAIAAYNTGAG NVAKAFNTDKSRNINRAISIINDLDSESVYSHLIANLPYDETKKYLKKVN KLEQQYQANINQWNLNNKEIKHEK >PSHAb0390 putative dihydrodipicolinate synthase (dapA-like) MRSLEQIKQASLITAIKTPYLSSGEIDLATYDRLVELQIAAGVDGIVVGG TTGEGQLMNWEEHLMLIAHSVNKFSSKLVIVGNTGSNNTREAIKATKYGF ASGMDAALQINPYYGRTSIAGVKEHLKRVLDIGPAFIYNVAGRTGQDLTP DIIEPLAKHEHFIGVKECGGNERIAHYEKQGIACWSGNDDESHDARHTHG AHGVISVSSNLMPELFRQLMDAPNAALNTSLQPLINWLFCEPNPIAINTA LMMTEAVKPVFRLPYLPLNDAQQQQGEKLINQLSASDVVGGHARCINEQE FFLIS >PSHAb0237 putative glycosyltransferase MKKVLVIGYVWPEPNSSAAGTHMMSLLNAFRAQNWQVEFATPALRTEHMV NLDDFGISSQSIALNCESFDDYVKAYAPDIVMFDRFMMEEQFGWRVDKHC PNALKILDTEDLQCLRNARHEAHKGEREFTTNDLHSDIAKREIAAILRCD LSLIISSYEMSLLNDVFKIEPSLLHHLPFMVDLNTLPTSTKIFEQRQHFM TIGNFRHAPNWDAVLYLQQIWPLIRKQLPKAELHIYGSYPPPKATALNNP KSGFLIKGWADNAFEVMQSARVCLAPLRFGAGIKGKLLEAMIMQTPSVTT NIGSEGMHNELPWPGKIANTAEDFANAAVEMYNNQSEFEQAQQDGNTLLN TLYDKAQLSAALIQKVDSISSDLNAHREKNFTGQMLKHHTMRSTQYMSQW IAEKNKKLD >PSHAb0363 putative outer membrane porin MINNTHVKRSALTLLCSITALPNMVLAAEYSVYGKAEVQIAKTDTGVMRY ADEGTQIEAPFSRIGIKGQHTLNEYVSAVFKYEVQVKGFEHDDTNEPFAA RNTYLGLKGAFGEIVVGRNDTRFKYSEGKLDNFNETQADIAQVIAGQDRL GDTITYTSNYWHNAQFSFTYAPKDENKDNQAGFAATLIYGDRNLNNTPYY ISLSHVDSLNNIKASRIAGVYKFEQLQLGALYQHSESIDGTKSGNGYVLS ASYTLDKWVPKLQFAKDDSALRQESKATQWSTGLDYVFDKQTTAYLLYTD LDLEENADSSLALGLRYKF >PSHAb0417 putative quaternary ammonium permease MTIWLSAGIIFTLLAVIAILFKWGNVRVVGVTPVRTFTFIAILFTSGLDV GLIMFPLTEFAGYADIKASPEYAFANPLAIEFGYWGFLIWGFYFLTCFYF CVIEPKVKFFDIPWVKFINNVVIIGTCAFTAYLLLTNLPWYLPDFGDGSS VIPVFYLIVLAAIAFAAYSSTDIKYVRILSISTTWMFLALIAFMWAGAFV FGDSELSAFSNNLGAIGTYFANINEFVLPLNDYHEFYLFWWFAWSIMIGQ FTARFVGGLRTYQVLAAMLIFPSIPIAIWFSVLYHYHEAGIPTEGIKNFA MVFVGIIFVINSLDSLIRLYTDNLNLTVKRLGKFKYLTMNIVALSLLTLL FKLEFLQIQWVGALVIALFFICIAYIGYNKLKTVNDIIGSPKANKIDYTK IENMS >PSHAb0108 putative membrane protein MIKILTRLTLCVALFYSFNSAAYNQAMCILIKQEMQQHSNNKTGRSYRNA ARDYNKNCNKPVVTPTQPKPKPHAIVNDPEPQKALPEPITESVKAPIVEP LKTHSETDNTASINTELQASPSQTSQVTTDEPVANVKSSDIKSTDVKSTD IKNPAAKSTQTNTTEISAEPIAAAQKPANIKPTPVSKPNTESAASLLLPS LLLLLIVLIGVMVLVRMRRSKQSNSEVATVLPTSPAVTTPAPKSVVKPAV KSAAKPSPSAVNTQNTTTAQIAAESVSMQQIDAALAKPQASTSEPETVAK TTNTTFINEKPKTKTKAEPNTAEFEAAAKNTLERIKNASDFAEPEVRMFD PDAPLPTKKQRQQQVTQQAPAAINDQTPAQNTIEPANISPEPIIAQQPTT NIHPPVNSTTEQATSFNTEHEFKEPEVRTFDPDAPLPGSKAKPVIKADTN QQPEPVAEPKEQNVQIDNSNPFANLSLDDSWDPNSSVKPKIAEKKREPKS QALIEAEQRAKNMQTKE >PSHAb0370 putative lipoprotein component of a efflux transporter MNKHLIAVALATASLTLTSCADESTAQSAPTAQHQPIDVAKVIVKPVQSW HTYTTRLESPQEVALMPRVSGVIDSIEFNEGDLVNKGDVLFQLDNRSFTA KVASLEAQVNSAKAALEQASSEATRAVRLTQRKAISTEQAQARTSTLRQR EAQLAALQAQLTSAQLDLEFTSVVSPIDGIISRANITKGNNILAGQSVLT SIVSNEKMYAYFDIDERTWNSSFNDVSAASRQPVVMQKVGQDDFAYSGYI NFIDNQINAATGTLRVRAVFADNSGQLRAGSFARIKLAANAITETVIVPD RAIGTDLKNRFVLSVGENNILQYKLVTVGERYGSLRAITAGLTEGDVIAV NGPARVGPGMPISPNTVTIDTSGIAFTLGNSNNQLVAKQ >PSHAb0398 putative protein with Glycosyl transferase domain MNKFCIVIPNYNHTSVIAAVLTSLAEYNLPIIMVDDASNEAAKAVFSALT QQHPLLTIVTHEHNQGKGGAVQSGLHYAYQQGYSHAIQVDADGQHNLADL AQLLRLSNANPQALVSCCPIYDASVPKHRYLARYLTHVWVWIETLSFEIV DSMCGFRVYPLGACEKLLKEVKLGKRMDFDPEILVRLYWRNVPFIFLPSQ VIYPENGLSHFQPLHDNVRISWLHTRLFFGMLVRSPWLIAHKLKRRYGR >PSHAb0509 putative periplasmic lytic murein transglycosylase MIKKLAMILCGVCLSTSVMAKTQAEFQTYLDALKQEAIAKGYDSQLIDQA FAGASYKEKIVSADKNQPEVKETLETYLPKRVPQWKIDRARKLYAENQDV LEKVAKDFGVQARFIVAIWGLESNFGAIQGGHNVISSLVTLAFDGRRETM YKKQLWAALDILKSGHITLDKFKGSWAGAMGQTQFMPTSFNAYAVDYNND GRKDIWTTKEDAFASIANYLKQEGWNDSLTWGRQVKLPENFDSKYVLVRG TKTRKQWLEFWNDSERSLAEWQALGVRRADGSDLPNVDVRAALVMPDDIN GRMYLAYDNYKVFMHWNRSYYFATSVGYLSDRIGYPKI >PSHAb0325 putative outer membrane protein oprM precursor of a metabolite export system MNLKTLGLNALTLAVLTGCQLAPEQQEIALPVPDAYASGAEQAQATQLNW QQFFNDEKLQALIAQSLEHNKDLQIAALNVQRVRGLYQIEDSALFPSLDI NGSGSRQRLPGDLSSTGEPRINSQYSATVGITSYELDIWGKVRNQSAQAL QTLYSTQLSQYSMQVSLIAELANAWLNYATDQQLLALAEETLTSQQSSLS LTQQSFDLGAASAITLEQLKSTVATAKVDIAKYKRLLKRDKNALDLLVGN SVASDLLPNASLNHLLDLPEVPVGLPSDLLTQRPDIKAVEHQLLAANANI GIARAAFYPSISLTANAGTASSDLSGLFDGGSGTWSFVPTINLPIFNMGR NQANLDVAKAAQQIALTTYQQKIQQAFREVADVLADREGYNAQLSALEQL VQSRQATFDISQARYDKGADSYLQVLDSQRTWYSAQQQLITGKQALLASK INLYKAVGGGWQVTSPAVQD >PSHAb0439 putative multidrug resistance protein (substrate binding lipoprotein) MHLLRLCVVTTTLLGLIACSEPEPQVKEEPIRPVKLFNIGHDSQVNIRSF PAEVVANQGSYLAFRVSGELVEFPVLAGQHVKKGQLLAKLDPEDFQLQYN ERKARYELAKSQLGRIEQLFEKRITSQSELDQAIANKQVAESAFKIAQTN VEYSQLRAPFAGTVAKVFVKNFESVQAKQNILRLETRDLMDVEIQVPERI VARFIKGTQYQPTVIFDGYHDKKYTLTLKEWDTQADPATLTYKVVFSLPV PEDFNLLAGMTGRVLIDLSKVTQSQTAYTILPNEAVFSDPQQSISNNAYV WLYNEQTGQIHKQAVKVGQLHRDGIEVLSGITEGQQIVSAGVHSLKEGMQ VRPWNKERGL >PSHAb0176 putative mechanosensitive channel family protein (MscS family UPF0003) MKDKLLAFWQSHSETIITLGYKVILALVILIASGVIARAVKRAVNGSKSP LNKLDKTLLPIISRLSSYLVYIIGSLFILDIFGVNTASLVALMAAAGLAI GLALKSTLSNIAAGIMLLILRPFKVGDFIDASGTSGTVSEINLFTTIFKT TDGLYIASPNGKVWGGNIKNFTRNGKRRMDIVVGISYADSIDDGLNVLKQ IASSEGRLLAEPAPKVMVVSIAESSVNLQLRAWTVNGDYWQTVWDLNKRV KESIEQAGLTIPFPQRTLHLPESLATSVTINKDTAKVD >PSHAb0458 putative cyclopropane-fatty-acyl-phospholipid synthase MEKATHLRCQNNRSWLTNLYKKIVFKAFSSIQTGQITLVDNNERSTFGDL SSAAKVTITVNNKAMYKAFCLSGSVGAGESYILGQWSCDNLTQLIEIFAI NQNQLDAFEKKFSFFSNIVNRLNHLKNKNSESGSKKNIIAHYDLGNDLYE SFLSKEMLYSCAVYPEKEATLEQAQQYKLQRICEQVELQKGDSVIEIGTG WGAFAIYAATHYDCYVTTTTISDEQHDYVEQKVKQLGLEHKITLLKLDYR SLKGQYDKLVSIEMIEAVGHDYLPSFFTQCSALLKDDGAMLIQAITIGDQ RYKHYLKNSDFIQQYIFPGGCLPSLNEMSEQIKNNTDMVIHTVNDIGAHY ARTLADWRTRFIQSWPDLDSSKFDERFYRLWLFYFAYCEGAFRARATSTV HLMARKPRFISTDDEIALGY >PSHAb0524 putative TonB2 protein MRYLIAFVIAILVTFMLFLGMQALITGGEGAMSEPAKGNVLDFVRLKKEE SLQTKQRKPQKPPTPKEPPPPMESPKMQNSDANAKANNFDFAANVDAEVN LAGGLALESSDGEYLPIVKVAPVYPRRALSRGIEGYVIVEFTVTKQGTVR DPQVLKAEPESLFDRAAMDAALKFKYKPRVVNGEAVEVAGVQNKISFQIS G >PSHAb0069 putative membrane protein with TonB domain MLILLINTNNNSYHLDLKAMKFTIFILLSAVAHYIGLFMQPVSPKAMTFS QGQKADRVAINIINSTQVNASKVAKKIPAEPKLTASVVKNDNVSTEFSGT KQHLKVVKKTPENIKKIIDNPPKKPAKAKPVNTAKNTEHKKSVKNAPANK NKIRPAAPSSSTTKLSNQHSATNQLVTITELPLFKAPKPMLTYPLRAKKR GYEGVTLLQIELNKQGHIAKLTVLKSSGFTELDKAALNNVAQWQFHPVVK NNHPIKARFSVPIRFSLNV >PSHAb0372 putative lipoprotein, possibly associated with the outermembrane MIKLVQKNLKTSLTTSAILIAAMLSGCAAKIDAASEKNVVSEFIASANIA SELNNIDETNWWQKLESAQLNQLVTDALANNHNLQTSQLVLKSALARLGE QQAQYLPQGGVEIGAQRSGLGDTNSRQSSANLALNWQLDLFGRITALVDA ANASAMSQAEQVRLLQIEVVSSVVKGFVSYQGNVQKQHIVTLQIDALEQS IAVLQAQVDEGVANELDLNRTMAQLKQQQALMPAIEYAKYRDLSTLAVLS GQLAQNVKLTNEQAILEHKFTVSLNDANESIALRPDISQALYAFSQANSL SVAASKALLPDISLSGFAGVLSIGSNSFSDTQQQWQVAPQIQWSILSYPA LIAQRDAQQLLTQAAYSDYQQVILQALSESELSLQLLVNQAQQKSFAEQR YQFANNAFLQAQAMYEEGQIPYLELLDARRDVLIAQENAVDSTISSLLAK VNAYQSFNGRWSYALNNTNQ >PSHAb0487 putative substrate binding periplasmic component of a multidrug resistance protein (metabolite exporter) MNIKHVVKNRYTLSIALAVLLSGCSEPEVDTKIEKAPKPVKLITIKDTAQ SNILTYPATVDAIKSAKLAFQVGGKIDKLNVIAAQSVLKGDELASLEKRN FINEVNSTKIQYETANNDFNRGIKLSKDGVISARDIEQLKSKKEVAQSRY DSAKKALTDSTLVAPYDAIVAAVPVEALENVNAGQHIVTLFGKGEMEVVV NIPSSIVATVDSRTGSRAFVLLESAANTPIPATFRRANLEADTSSQTYEV RFSFAVPQNLNILPGMNASLRIEFDNKSTTNEITLPTFAIFEENGQHYVW TVSESMIVSKTVVTLVNGIGEELVVTSGIKAGDVIVGAGANYVTDGMKVR AWTKS >PSHAb0323 acrE, putative lipoprotein component of efflux protein (exporter) MQRSRIALLVFSALVGSVVLTGCDQAAEQPKATASQGTPVGVVTIKSQTL TLKQELPGRVSAYQIAEIRPQVSGIVQSRLFTEGTQVEKGQALYQINPAI FEAELAASEAAVARAEASIASSKSKAARYKELLAIKAVSQQDFDEADATA KQAKAELLTAKAQLQAAQINLDYSHVASPISGQISKSSVTVGALVSANQA MALATVTQLDPIYVDLTQSSNELTKLKKALSSGLLSVDADIQTEVELYME DGSVYPHKGTLQFSEVTVNPSTGSVTLRAKFSNPEKLLLPGMYARASIVE GVQENAVLVPQRGVTRNTKGQPTAMVVSENNTVESRVLEVDRTIGSNWLV TKGLSAGDKLIVEGLQKIRPGAPVIVTEATPLATQAQ >PSHAb0044 blc, outer membrane lipoprotein (lipocalin) MNKIKCFLLTITLFSLSACTSPPEGITAVKNFDLQKYQGKWYEIARLNHS FEEGMEQVTANYTINDDGTVKVINKGYITKEQQWKNAQGLAKFVGDSDIG HFKVSFFGPFYGAYVIFELEQADYQYAFITSYNKDYLWFLSRTPQVGDEL KEHFLKTVKDLGFATEQIIWVKQK >PSHAb0194 csgG, putative assembly or transport protein for curli synthesis MYKLLITIILLTLTGCTTIGNLIPPSQQKAISLEPTEIFADLKNLPKPMG SIPVSVYSFRDQTGQYKPQTNVSSFSTAVTQGANSILIQALHESDWFTPV EREGLQNILTERKIIRAAQSENPNQADLPPLTTAKIILEGGIISYDTNVK TGGLGMEYFGIGASELYREDAISIYLRAVDVRTGQVLLSVATSKKVLSQE MRAGFFRYVSYKRLAEAEAGYSDNEPMSICVTQAIEKALTDLITKGIDKG LWAKKAS >PSHAb0163 dsbE, putative thiol:disulfide interchange protein MLSISLGPFVIAISQLIILLGLGVFWLLTYLQTRKQPQQKAILDIVFKAF VVGFIVARLMFVLTMWDAYQENWWQLINISDGGFMPSYGWVAGALVLALY ARGKKAVLKTYFIAAIVALFTIMVPTFAASIYKAGVELPQSAVYNLRGKE VDLQSFKGKPVVINFWASWCPPCRKEMPVLQAAQKNNPNIAFVFVNQGED LFTVQKFINAEQLDLRNVFFDQNSNVSRESGAAGLPTTLFYSSDGKLVTS HMGELSHASLRYYMQAINQQSAQ >PSHAb0156 nanA, N-acetylneuraminate lyase (aldolase) MNKLTGLIAAPHTPFDKNGDVNLPVIDQLAELLIKQGVKGVYICGTTGEG LNCSVAERKAIAERWVTAAQGKLSITVHTGALSIADSLELTKHAETLDIF ATSIIAPCFFKPGSVDDLVHYCATVAAAAPSKAFYYYHSGMSGVMFDMEQ FLIKADKVIPNLAGIKFNHGDLYEFQRCKRACGGKFDIPFGVDEFLPGGL AVGAIGAVGSTYNYAAPLYLEIIEAFNKGDQETVTALMDKVIALIRTLVQ YGGVAAGKAAMQLHGIDVGNPRLPIRALNDDEKKDVVAKMQAAGFMDHQP A