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Gene list

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COG category: Cell wall/membrane biogenesis
Gene type: CDS
Genomic element: chromosome II

Number of genes found: 22

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# Pseudoalteromonas haloplanktis TAC125, TAC125

>PSHAb0242 putative transglycosylase
MRHFSLFLPLLCTFTVTNISANTFTEFKKQQLLEATSFSKQYKQDYANFR
EAYLADYDSFRDSLLKHWSVPIQSSTLKQVVYSADLKSRIIIDEQSMTVT
VETLDSHSTLGQAAETLITDKNLASSLELISPTKQELENSLAISKSEIKS
QKELKQNQETLAQEITTQYEQSLSSVDKNTQLKPQQAIQSKQQLAIEKQQ
RIEKLNTSLSTKDNDVTYKNITSRTFSLPDEYLHKKVSPYLNFYLQYEQQ
QLPLLLAISHAESSFNPNAKSHIPAFGLMQIVPNSAGLDVARKHFKKDIA
PTPEELFDPDTNITYGSAYISILDKSYLRKIKDPISRKYCAIAAYNTGAG
NVAKAFNTDKSRNINRAISIINDLDSESVYSHLIANLPYDETKKYLKKVN
KLEQQYQANINQWNLNNKEIKHEK
>PSHAb0390 putative dihydrodipicolinate synthase (dapA-like)
MRSLEQIKQASLITAIKTPYLSSGEIDLATYDRLVELQIAAGVDGIVVGG
TTGEGQLMNWEEHLMLIAHSVNKFSSKLVIVGNTGSNNTREAIKATKYGF
ASGMDAALQINPYYGRTSIAGVKEHLKRVLDIGPAFIYNVAGRTGQDLTP
DIIEPLAKHEHFIGVKECGGNERIAHYEKQGIACWSGNDDESHDARHTHG
AHGVISVSSNLMPELFRQLMDAPNAALNTSLQPLINWLFCEPNPIAINTA
LMMTEAVKPVFRLPYLPLNDAQQQQGEKLINQLSASDVVGGHARCINEQE
FFLIS
>PSHAb0237 putative glycosyltransferase
MKKVLVIGYVWPEPNSSAAGTHMMSLLNAFRAQNWQVEFATPALRTEHMV
NLDDFGISSQSIALNCESFDDYVKAYAPDIVMFDRFMMEEQFGWRVDKHC
PNALKILDTEDLQCLRNARHEAHKGEREFTTNDLHSDIAKREIAAILRCD
LSLIISSYEMSLLNDVFKIEPSLLHHLPFMVDLNTLPTSTKIFEQRQHFM
TIGNFRHAPNWDAVLYLQQIWPLIRKQLPKAELHIYGSYPPPKATALNNP
KSGFLIKGWADNAFEVMQSARVCLAPLRFGAGIKGKLLEAMIMQTPSVTT
NIGSEGMHNELPWPGKIANTAEDFANAAVEMYNNQSEFEQAQQDGNTLLN
TLYDKAQLSAALIQKVDSISSDLNAHREKNFTGQMLKHHTMRSTQYMSQW
IAEKNKKLD
>PSHAb0363 putative outer membrane porin
MINNTHVKRSALTLLCSITALPNMVLAAEYSVYGKAEVQIAKTDTGVMRY
ADEGTQIEAPFSRIGIKGQHTLNEYVSAVFKYEVQVKGFEHDDTNEPFAA
RNTYLGLKGAFGEIVVGRNDTRFKYSEGKLDNFNETQADIAQVIAGQDRL
GDTITYTSNYWHNAQFSFTYAPKDENKDNQAGFAATLIYGDRNLNNTPYY
ISLSHVDSLNNIKASRIAGVYKFEQLQLGALYQHSESIDGTKSGNGYVLS
ASYTLDKWVPKLQFAKDDSALRQESKATQWSTGLDYVFDKQTTAYLLYTD
LDLEENADSSLALGLRYKF
>PSHAb0417 putative quaternary ammonium permease
MTIWLSAGIIFTLLAVIAILFKWGNVRVVGVTPVRTFTFIAILFTSGLDV
GLIMFPLTEFAGYADIKASPEYAFANPLAIEFGYWGFLIWGFYFLTCFYF
CVIEPKVKFFDIPWVKFINNVVIIGTCAFTAYLLLTNLPWYLPDFGDGSS
VIPVFYLIVLAAIAFAAYSSTDIKYVRILSISTTWMFLALIAFMWAGAFV
FGDSELSAFSNNLGAIGTYFANINEFVLPLNDYHEFYLFWWFAWSIMIGQ
FTARFVGGLRTYQVLAAMLIFPSIPIAIWFSVLYHYHEAGIPTEGIKNFA
MVFVGIIFVINSLDSLIRLYTDNLNLTVKRLGKFKYLTMNIVALSLLTLL
FKLEFLQIQWVGALVIALFFICIAYIGYNKLKTVNDIIGSPKANKIDYTK
IENMS
>PSHAb0108 putative membrane protein
MIKILTRLTLCVALFYSFNSAAYNQAMCILIKQEMQQHSNNKTGRSYRNA
ARDYNKNCNKPVVTPTQPKPKPHAIVNDPEPQKALPEPITESVKAPIVEP
LKTHSETDNTASINTELQASPSQTSQVTTDEPVANVKSSDIKSTDVKSTD
IKNPAAKSTQTNTTEISAEPIAAAQKPANIKPTPVSKPNTESAASLLLPS
LLLLLIVLIGVMVLVRMRRSKQSNSEVATVLPTSPAVTTPAPKSVVKPAV
KSAAKPSPSAVNTQNTTTAQIAAESVSMQQIDAALAKPQASTSEPETVAK
TTNTTFINEKPKTKTKAEPNTAEFEAAAKNTLERIKNASDFAEPEVRMFD
PDAPLPTKKQRQQQVTQQAPAAINDQTPAQNTIEPANISPEPIIAQQPTT
NIHPPVNSTTEQATSFNTEHEFKEPEVRTFDPDAPLPGSKAKPVIKADTN
QQPEPVAEPKEQNVQIDNSNPFANLSLDDSWDPNSSVKPKIAEKKREPKS
QALIEAEQRAKNMQTKE
>PSHAb0370 putative lipoprotein component of a efflux transporter
MNKHLIAVALATASLTLTSCADESTAQSAPTAQHQPIDVAKVIVKPVQSW
HTYTTRLESPQEVALMPRVSGVIDSIEFNEGDLVNKGDVLFQLDNRSFTA
KVASLEAQVNSAKAALEQASSEATRAVRLTQRKAISTEQAQARTSTLRQR
EAQLAALQAQLTSAQLDLEFTSVVSPIDGIISRANITKGNNILAGQSVLT
SIVSNEKMYAYFDIDERTWNSSFNDVSAASRQPVVMQKVGQDDFAYSGYI
NFIDNQINAATGTLRVRAVFADNSGQLRAGSFARIKLAANAITETVIVPD
RAIGTDLKNRFVLSVGENNILQYKLVTVGERYGSLRAITAGLTEGDVIAV
NGPARVGPGMPISPNTVTIDTSGIAFTLGNSNNQLVAKQ
>PSHAb0398 putative protein with Glycosyl transferase domain
MNKFCIVIPNYNHTSVIAAVLTSLAEYNLPIIMVDDASNEAAKAVFSALT
QQHPLLTIVTHEHNQGKGGAVQSGLHYAYQQGYSHAIQVDADGQHNLADL
AQLLRLSNANPQALVSCCPIYDASVPKHRYLARYLTHVWVWIETLSFEIV
DSMCGFRVYPLGACEKLLKEVKLGKRMDFDPEILVRLYWRNVPFIFLPSQ
VIYPENGLSHFQPLHDNVRISWLHTRLFFGMLVRSPWLIAHKLKRRYGR
>PSHAb0509 putative periplasmic lytic murein transglycosylase
MIKKLAMILCGVCLSTSVMAKTQAEFQTYLDALKQEAIAKGYDSQLIDQA
FAGASYKEKIVSADKNQPEVKETLETYLPKRVPQWKIDRARKLYAENQDV
LEKVAKDFGVQARFIVAIWGLESNFGAIQGGHNVISSLVTLAFDGRRETM
YKKQLWAALDILKSGHITLDKFKGSWAGAMGQTQFMPTSFNAYAVDYNND
GRKDIWTTKEDAFASIANYLKQEGWNDSLTWGRQVKLPENFDSKYVLVRG
TKTRKQWLEFWNDSERSLAEWQALGVRRADGSDLPNVDVRAALVMPDDIN
GRMYLAYDNYKVFMHWNRSYYFATSVGYLSDRIGYPKI
>PSHAb0325 putative outer membrane protein oprM precursor of a metabolite export system
MNLKTLGLNALTLAVLTGCQLAPEQQEIALPVPDAYASGAEQAQATQLNW
QQFFNDEKLQALIAQSLEHNKDLQIAALNVQRVRGLYQIEDSALFPSLDI
NGSGSRQRLPGDLSSTGEPRINSQYSATVGITSYELDIWGKVRNQSAQAL
QTLYSTQLSQYSMQVSLIAELANAWLNYATDQQLLALAEETLTSQQSSLS
LTQQSFDLGAASAITLEQLKSTVATAKVDIAKYKRLLKRDKNALDLLVGN
SVASDLLPNASLNHLLDLPEVPVGLPSDLLTQRPDIKAVEHQLLAANANI
GIARAAFYPSISLTANAGTASSDLSGLFDGGSGTWSFVPTINLPIFNMGR
NQANLDVAKAAQQIALTTYQQKIQQAFREVADVLADREGYNAQLSALEQL
VQSRQATFDISQARYDKGADSYLQVLDSQRTWYSAQQQLITGKQALLASK
INLYKAVGGGWQVTSPAVQD
>PSHAb0439 putative multidrug resistance protein (substrate binding lipoprotein)
MHLLRLCVVTTTLLGLIACSEPEPQVKEEPIRPVKLFNIGHDSQVNIRSF
PAEVVANQGSYLAFRVSGELVEFPVLAGQHVKKGQLLAKLDPEDFQLQYN
ERKARYELAKSQLGRIEQLFEKRITSQSELDQAIANKQVAESAFKIAQTN
VEYSQLRAPFAGTVAKVFVKNFESVQAKQNILRLETRDLMDVEIQVPERI
VARFIKGTQYQPTVIFDGYHDKKYTLTLKEWDTQADPATLTYKVVFSLPV
PEDFNLLAGMTGRVLIDLSKVTQSQTAYTILPNEAVFSDPQQSISNNAYV
WLYNEQTGQIHKQAVKVGQLHRDGIEVLSGITEGQQIVSAGVHSLKEGMQ
VRPWNKERGL
>PSHAb0176 putative mechanosensitive channel family protein (MscS family UPF0003)
MKDKLLAFWQSHSETIITLGYKVILALVILIASGVIARAVKRAVNGSKSP
LNKLDKTLLPIISRLSSYLVYIIGSLFILDIFGVNTASLVALMAAAGLAI
GLALKSTLSNIAAGIMLLILRPFKVGDFIDASGTSGTVSEINLFTTIFKT
TDGLYIASPNGKVWGGNIKNFTRNGKRRMDIVVGISYADSIDDGLNVLKQ
IASSEGRLLAEPAPKVMVVSIAESSVNLQLRAWTVNGDYWQTVWDLNKRV
KESIEQAGLTIPFPQRTLHLPESLATSVTINKDTAKVD
>PSHAb0458 putative cyclopropane-fatty-acyl-phospholipid synthase
MEKATHLRCQNNRSWLTNLYKKIVFKAFSSIQTGQITLVDNNERSTFGDL
SSAAKVTITVNNKAMYKAFCLSGSVGAGESYILGQWSCDNLTQLIEIFAI
NQNQLDAFEKKFSFFSNIVNRLNHLKNKNSESGSKKNIIAHYDLGNDLYE
SFLSKEMLYSCAVYPEKEATLEQAQQYKLQRICEQVELQKGDSVIEIGTG
WGAFAIYAATHYDCYVTTTTISDEQHDYVEQKVKQLGLEHKITLLKLDYR
SLKGQYDKLVSIEMIEAVGHDYLPSFFTQCSALLKDDGAMLIQAITIGDQ
RYKHYLKNSDFIQQYIFPGGCLPSLNEMSEQIKNNTDMVIHTVNDIGAHY
ARTLADWRTRFIQSWPDLDSSKFDERFYRLWLFYFAYCEGAFRARATSTV
HLMARKPRFISTDDEIALGY
>PSHAb0524 putative TonB2 protein
MRYLIAFVIAILVTFMLFLGMQALITGGEGAMSEPAKGNVLDFVRLKKEE
SLQTKQRKPQKPPTPKEPPPPMESPKMQNSDANAKANNFDFAANVDAEVN
LAGGLALESSDGEYLPIVKVAPVYPRRALSRGIEGYVIVEFTVTKQGTVR
DPQVLKAEPESLFDRAAMDAALKFKYKPRVVNGEAVEVAGVQNKISFQIS
G
>PSHAb0069 putative membrane protein with TonB domain
MLILLINTNNNSYHLDLKAMKFTIFILLSAVAHYIGLFMQPVSPKAMTFS
QGQKADRVAINIINSTQVNASKVAKKIPAEPKLTASVVKNDNVSTEFSGT
KQHLKVVKKTPENIKKIIDNPPKKPAKAKPVNTAKNTEHKKSVKNAPANK
NKIRPAAPSSSTTKLSNQHSATNQLVTITELPLFKAPKPMLTYPLRAKKR
GYEGVTLLQIELNKQGHIAKLTVLKSSGFTELDKAALNNVAQWQFHPVVK
NNHPIKARFSVPIRFSLNV
>PSHAb0372 putative lipoprotein, possibly associated with the outermembrane
MIKLVQKNLKTSLTTSAILIAAMLSGCAAKIDAASEKNVVSEFIASANIA
SELNNIDETNWWQKLESAQLNQLVTDALANNHNLQTSQLVLKSALARLGE
QQAQYLPQGGVEIGAQRSGLGDTNSRQSSANLALNWQLDLFGRITALVDA
ANASAMSQAEQVRLLQIEVVSSVVKGFVSYQGNVQKQHIVTLQIDALEQS
IAVLQAQVDEGVANELDLNRTMAQLKQQQALMPAIEYAKYRDLSTLAVLS
GQLAQNVKLTNEQAILEHKFTVSLNDANESIALRPDISQALYAFSQANSL
SVAASKALLPDISLSGFAGVLSIGSNSFSDTQQQWQVAPQIQWSILSYPA
LIAQRDAQQLLTQAAYSDYQQVILQALSESELSLQLLVNQAQQKSFAEQR
YQFANNAFLQAQAMYEEGQIPYLELLDARRDVLIAQENAVDSTISSLLAK
VNAYQSFNGRWSYALNNTNQ
>PSHAb0487 putative substrate binding periplasmic component of a multidrug resistance protein (metabolite exporter)
MNIKHVVKNRYTLSIALAVLLSGCSEPEVDTKIEKAPKPVKLITIKDTAQ
SNILTYPATVDAIKSAKLAFQVGGKIDKLNVIAAQSVLKGDELASLEKRN
FINEVNSTKIQYETANNDFNRGIKLSKDGVISARDIEQLKSKKEVAQSRY
DSAKKALTDSTLVAPYDAIVAAVPVEALENVNAGQHIVTLFGKGEMEVVV
NIPSSIVATVDSRTGSRAFVLLESAANTPIPATFRRANLEADTSSQTYEV
RFSFAVPQNLNILPGMNASLRIEFDNKSTTNEITLPTFAIFEENGQHYVW
TVSESMIVSKTVVTLVNGIGEELVVTSGIKAGDVIVGAGANYVTDGMKVR
AWTKS
>PSHAb0323 acrE, putative lipoprotein component of efflux protein (exporter)
MQRSRIALLVFSALVGSVVLTGCDQAAEQPKATASQGTPVGVVTIKSQTL
TLKQELPGRVSAYQIAEIRPQVSGIVQSRLFTEGTQVEKGQALYQINPAI
FEAELAASEAAVARAEASIASSKSKAARYKELLAIKAVSQQDFDEADATA
KQAKAELLTAKAQLQAAQINLDYSHVASPISGQISKSSVTVGALVSANQA
MALATVTQLDPIYVDLTQSSNELTKLKKALSSGLLSVDADIQTEVELYME
DGSVYPHKGTLQFSEVTVNPSTGSVTLRAKFSNPEKLLLPGMYARASIVE
GVQENAVLVPQRGVTRNTKGQPTAMVVSENNTVESRVLEVDRTIGSNWLV
TKGLSAGDKLIVEGLQKIRPGAPVIVTEATPLATQAQ
>PSHAb0044 blc, outer membrane lipoprotein (lipocalin)
MNKIKCFLLTITLFSLSACTSPPEGITAVKNFDLQKYQGKWYEIARLNHS
FEEGMEQVTANYTINDDGTVKVINKGYITKEQQWKNAQGLAKFVGDSDIG
HFKVSFFGPFYGAYVIFELEQADYQYAFITSYNKDYLWFLSRTPQVGDEL
KEHFLKTVKDLGFATEQIIWVKQK
>PSHAb0194 csgG, putative assembly or transport protein for curli synthesis
MYKLLITIILLTLTGCTTIGNLIPPSQQKAISLEPTEIFADLKNLPKPMG
SIPVSVYSFRDQTGQYKPQTNVSSFSTAVTQGANSILIQALHESDWFTPV
EREGLQNILTERKIIRAAQSENPNQADLPPLTTAKIILEGGIISYDTNVK
TGGLGMEYFGIGASELYREDAISIYLRAVDVRTGQVLLSVATSKKVLSQE
MRAGFFRYVSYKRLAEAEAGYSDNEPMSICVTQAIEKALTDLITKGIDKG
LWAKKAS
>PSHAb0163 dsbE, putative thiol:disulfide interchange protein
MLSISLGPFVIAISQLIILLGLGVFWLLTYLQTRKQPQQKAILDIVFKAF
VVGFIVARLMFVLTMWDAYQENWWQLINISDGGFMPSYGWVAGALVLALY
ARGKKAVLKTYFIAAIVALFTIMVPTFAASIYKAGVELPQSAVYNLRGKE
VDLQSFKGKPVVINFWASWCPPCRKEMPVLQAAQKNNPNIAFVFVNQGED
LFTVQKFINAEQLDLRNVFFDQNSNVSRESGAAGLPTTLFYSSDGKLVTS
HMGELSHASLRYYMQAINQQSAQ
>PSHAb0156 nanA, N-acetylneuraminate lyase (aldolase)
MNKLTGLIAAPHTPFDKNGDVNLPVIDQLAELLIKQGVKGVYICGTTGEG
LNCSVAERKAIAERWVTAAQGKLSITVHTGALSIADSLELTKHAETLDIF
ATSIIAPCFFKPGSVDDLVHYCATVAAAAPSKAFYYYHSGMSGVMFDMEQ
FLIKADKVIPNLAGIKFNHGDLYEFQRCKRACGGKFDIPFGVDEFLPGGL
AVGAIGAVGSTYNYAAPLYLEIIEAFNKGDQETVTALMDKVIALIRTLVQ
YGGVAAGKAAMQLHGIDVGNPRLPIRALNDDEKKDVVAKMQAAGFMDHQP
A