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Gene list

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COG category: Cell wall/membrane biogenesis
Gene type: CDS
Genomic element: chromosome 1

Number of genes found: 19

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# Photobacterium profundum, ss9

>PBPRA0350 hypothetical protein
MLTPLILGGCTLWPPVEDNDPDPPFQVQLRQLEHHGFELQILATRGAKLC
LPGQYQKLEYLYLKARDEAKAGFDKDAEITLLQYQTQQAVIQTQMDWLEY
HTTCFDHSYSEVELKEKLLVFMALDNQFALNRAELLPDYQQALRYAATIL
KRQSHWHLQLTGHTDSLGTSDNNIQLGMKRASAVKRFLIEQGVKSNQIAI
FSAGESMSMDDTHSRTQRLANRKVEAQVLVEHHAQSLHRVYSLKDWNAVR
ESL
>PBPRA0349 putative periplasmic protein involved in polysaccharide export
MRRMLLLLLLIMPFSYVWGDTLTPGDRVFLQLPGEEAFDDPYTINDQGQL
RLPEVGLVNVAGLTVIDAEQRVRQKLASIYRNLDEFKLTIMEQLIRIKVL
GYVEKPGTVSLKPGSNVQMALSAAGGARPGAQLDKFKLLRNSNTKIFNYK
AYLDSGDQTLLPSLKGGDTIFIPASSLLGNIEMNFDDMSIHERGDADEAQ
GITIFGELRNPGTFSFKPNMTVVDALMRANGVTRYADVTKIRVITDGMSY
RFNLSTYLETGDTSNLPPIKPGTTIFAPIEAPEKTSTDDTQGVTIFGELH
KPGTFSFKPNMNVVDALMRAEGVTRYADVTKIRVITDNVPSQFDLKVYLD
TGKTDNMPEVKPGTTIFVPIEVKDINTTSRTIYVMGEAKAAGPYETSPGT
SFIDVLANAGGPTRFADTTNIKILSNTKAPIAINLVEYAQNPAKYTLPTM
SPGDVIFIPEKVDLNEKSWLKVTNDRAIKIMGAVYKPGRYEWHDSMTFMD
LLAHSGGPKQQANLSNIRIIKESTAENKGHEVQFFDLQAFTKQGSPTNLL
PNLNASDTVIVDELPHDPTDNKAGWIRQAAKDSIYIFGEVGAPGRYAFNQ
DLGFLDILSAADGPNSEADIQEILISHRNGKTSRLTRFDLARYFETGNEK
VLPKVSAGDVIYVPKTESVADTKAVKVIGAVNTPGRYKWNNQMSFLDLLA
MAGGPKQEANISNIRIIKESRVGKENVIYFDLESFINEGGNFAGLPRLEA
GDTIVIDELPHDPSDNKASWIRQSSDDSIYVFGQVGVPGRYAFNRELGFL
DILSAADGPNGEADLRQIRISHRDGNKTKVTQLNLSLYFETGDESLIPKV
VPGDVIYVPRRQGDWLDKPAERVVRLMGAVNKPGRYSFNTQMNILDLLAE
AGGPTDNAYIDRIMIVNTSCCGDKSQTFSLRDYVNDPSGSPLPLLRPGDT
VYVPDQDDSVTEQFRQGIRDALGIITLIVLGAAL
>PBPRA0352 hypothetical intercellular adhesion protein A
MILGWIILFVITAVIIYHHFVYTAALVWLGNKRKDEIKEKHKDPLIFPRI
SLIMPAHNEEAYIEAKLANILMLDYPAEKLQVLICCDGCSDNTAEIIAQH
ESQFTAAGISLKCWVKKNNRGKLARLNELMTYAKNKTDIISLTDTSALIS
IDALKQVARNFENEQTGAITCSYLLASPSEGENQYWQWQNNIRFAESQLG
SVIGGNGAFYAMRSHLYSPLPEDTINDDFILPMMVLKQGFNVIFNQNINS
VEIAPTSQNENHQRRQRIGAGNLQQLIRCQFIFTHKSLRVRWLFTSGKGL
RTVMPFLFVGYFITSVLMALQGSILALSMVISQLSIYGIASLPLINIHST
IIDKVHYIIGAYYSSLLGMLRYLNGQFKQGWRHLPPLSNYQTQSTQTIKR
MSDIIFSCIGLTLTLPLWPFIAFAIKYDSSGPIFYRQIRVGQISETKVEL
FEIFKFRTMTNDAEKKSGAVWATKNDPRITNTGRFLRATRLDELPQFINV
IRGDMSLIGPRPERPEMCGNLQNALPFYLERTTGLRPGLTGLAQVNSGYD
NGLEDVKNKIAWDHAYAIALSSPIQWLRMDLYILFKTSYIMFAKRGQ
>PBPRA0449 ECS3935, putative ADP-heptose synthase
MKLTLPDYDQASVLVVGDIMLDRYWYGPTGRISPEAPVPVVKVEQIEERP
GGAANVAMNIAALGGHVHLVGLTGIDEPAKALNEKLTSLDVRCDFVSLPD
YPTITKLRVMSRGQQMIRLDFEEGFHGVDKGLILPRLEQSLTHVKTVILS
DYAKGALEHVSAMIKLARDAGKPVFIDPKGTDFERYRGATLLTPNLSEFE
LVAGKVTSDDELVEKGFELIERFDFEALLVTRSEHGMTLLQKGQAPLHLP
TLAQEVYDVTGAGDTVISVLASSVAAGKSLADACKLANAAAGVVVAKLGT
STLSTIELTEAIYGSQDSGYGVIAETELKQAVSVARQRGETVVMTNGCFD
ILHAGHVAYLAEAAKLGDRLIVAVNSDSSVQGLKGPGRPVNPEDRRMAVL
AGLGAVDWVVPFTEETPQRLISEILPSLLVKGGDYKPEDIAGGKEVIAAG
GEVRVLSFEDGCSTSKIIEAIRGGKG
>PBPRA0385 MPL, putative UDP-N-acetylmuramate-alanine ligase
MHIHILGICGTFMGGAATLARQLGHKVTGSDANVYPPMSTLLDSQGIEII
QGYDPAQLSPAPDLVVIGNAMSRGNPCVEHVLNTNMRYTSGPQWLQEFLL
HDRWVLAVAGTHGKTTTASMLAWILEDCGYQPGFLVGGVLGNFGISARLG
ESMFFVVEADEYDSAFFDKRSKFVHYHPRTLVMNNLEFDHADIFDDLKAI
QRQFHHLVRTVPSNGRILAPKGVESIQQTLDMGCWSELEFTGDDGHWIAK
KQVADGSVFDVYLDGLMIGTVRWDLVGDHNVNNALMAIAAARHVGVTPDL
GCEALATFINTKRRLELKGEVKGVKVYDDFAHHPTAIELTLGGLRAKIGD
EQRILAVLEPRSNTMKLGVHKGDIAPALNAADCVFIFQPETIPWSVNEIA
DACSQPAVTDTNLDKLVAEIVAEVKSGDTILVMSNGGFGGIHDKLLAALA
AK
>PBPRA0532 PA0667, hypothetical membrane protein
MLVSKLTKLPRMHQILIALISAAVVMLILLPMPKKAEQTERKFEIGKIYP
LEINIEPNQLRPAQEDDRPNIPALTWKKHQVASGESLAVVFNKIGLSSST
LHRLINADEGTKELTALRPGDTFQFGIDDKNELIQLIQPKSPTEKLIITR
AGDTFKSNIEKKKVDTQLNFAQATITSSFWNAADRAGLTANQIMEIAGIF
GWDIDFALDIRAGDTFSVLFEERFVEGEQIGRGNILAATFSNLGQTFTAI
RSEDGKYYDQNGSAMRKAFLRSPINFRYVSSNFNPKRLHPVTGRVRAHRG
TDYVAPVGTPIWAAGDGIVMKSAYNKFNGNYVFIRHSSTYITKYLHMTKR
SVKTGQRVKQGQTVGTLGSTGRVTGAHLHYEFLVNGTHKNPRTVKLPQAD
SLKGKEKSAFKKYANDRLSQLAQFSQLIADNGPLEQGSHKG
>PBPRA0580 PM0080, putative prolipoprotein diacylglyceryl transferase
MSQGFLTFPTIDPVLIQLGPLAIRWYGLMYLVGFLFAMWLANRRADKPNS
GWTRDQVSDLLFAGFLGVVLGGRIGYVLFYNFGLFLDNPLYLFQVWTGGM
SFHGGLLGVMTAMLWYGHRNKRTFFSVADFIAPLVPFGLGMGRMGNFMNG
ELWGRVTDMPWAMVFPTGGPFPRHPSQLYEAFLEGFVLLIILNIFIRKPR
PAGAVSGLFLIGYGSFRFIIEYFREPDAQLGLFGDWISMGQILSSPMIIF
GALLMLWAYKAQPKTA
>PBPRA0592 S0026, putative lipoprotein signal peptidase
MLAVLVFIIDIGSKFLVMNTMDYGWPNRIEILPFFNLLYVHNYGAAFSFL
NDAGGWQRWFFAAIALGVSGLLAFWMRRTPIQNRLANSAYALIIGGALGN
LFDRLYHGFVVDFLDFYAGTYHWPAFNIADTAICIGAALIILEGFIADKK
ETVS
>PBPRA0594 S0028, putative LytB protein
MKILLANPRGFCAGVDRAISIVERALEMYQPPIYVRHEVVHNRFVVEGLK
QRGAIFVEELSEVPDDNIVIFSAHGVSQAVRNEAKERQLTVFDATCPLVT
KVHMEVARASRRSVEVVLIGHAGHPEVEGTMGQYASEDGGMYLVEKPEDV
EKLQVKDPSNLHYVSQTTLSVDETADVIDQLRKVFPEIQGPRKDDICYAT
QNRQDAVREMAESVDVMIVVGSKNSSNSNRLRELSEKLGTPGFLTDCPED
VQPVWFEGKTKVGVTAGASAPEDLVNQIISRIQALIGGDVEELSGREENM
FFEVPRELQVKNI
>PBPRA0599 S3440, hypothetical D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MCILMFKKILSLSLLVMSLPSLAAFNPQAAINKLPNGHDLALMIVDPATN
QVLYSQRTEQLQAPASTQKVITALAAKLYLDDNYRFNTDLEVSTNNVVLR
FNGDPTLSRTELASLLKTLKKNNLSTIKGNLYLNGNAFSGYERAAGWPWD
ILGVCYSAPSSSITLEHNCVQGALYSNKANGQKTRINIPSHQPIKATTNA
LIVTKEQQKQQHCELELVANPSNNYQLSGCLPQSKKPLPLNFAVQNTEAY
TAAVIQQELKRTGIQLKGKILRNDNIKGKRIARHQSAPLSELIDIMLKKS
DNLIADNLTKTLGREYFKQAGTFNNGVAAIKAILQEQANIDLTDTVMVDG
SGLSRNNRIKASSLMQVITHLYNNPSLGLLKNMPVSGESGTLLYRQSLRQ
APLKGNMVAKSGSLYGSYNLAGMIKTQSGKALLFVQLVNNYFPPDNSMND
KPTTPPITEFEKALYLSIYNEY
>PBPRA0379 SF4267, hypothetical outer membrane protein
MNDVLKRFGLTVVAMVFATPVLANTSLTIKGLKGNLQDNVDAYVSAIPKD
DYSTTLRFREQLEDEIENALKALGYYQPIFTYEIKDDDKKSSIAVTVEKG
PITHIAKSHIVLLGMAESDPDFIGLVKGSGLGLGESLNHGKYESLKSSLS
SLALRKGYFDASLTKSVMEVAPSRNEAFITIEFSSGRRYNFGDTTFTGSQ
IDEDRLQSLIPFEKDDPYLASKLGEFNQRLSTVGWFSSIFVGGDVQHLDD
GTVPIAVNLAPQVRNQIETGIGYSTDVGMRLKLNWKKPWLNSAGHSLSIK
TELSKVQPKIEAAYKIPLDDVLNDYYQVIGGIRYVDNHDTQSIEYNIGLE
RHWRLESDWKRVASLRWLYEDYKQGVDKEGNGEKGILSMIIPGITYSKTR
ARGGAMPTWGDKQLISVEYADPALGSDTRLARFRGRSAWIRSAGENHRGI
LRLDGGAIVADRIEDVPPSMRFFAGGDNSIRGYGYESIAPRNDGGLLVGG
QYMATSTLEYQYRVYGDWWGAVFYDYGSAWISDPEWYSGTGVGVRWASPV
GPISIDFAWGLEKETDKFQLHFTLGPEL
>PBPRA0405 SO3636, hypothetical organic solvent tolerance protein
MSLTSRSLLATMISLALYGPAMANENNKLSEDVNDELALTSDNADEIELV
RGVCIAPQDRSTDPNNDPIKVTADHAEALDKTKVTYTGDVVVQQGNRTIA
ADQAYLRQPENIVVAEGNVYFHDGTIEVDSERLQSDLDTEDSEMDHAVYN
LTCEPGRGEARRITKTHAQGTQFYRMKDGTYTTCPAEDNSWRFSATTLER
EGDSPFANLYNARFEVLDVPVFYLPYLRVPVGKERLTGFLYPSVSYGSRD
GFEFETPFYWNIAPNYDLTLTPKYMSNRGLQLNTDFRYLTEFGQGSLKGE
YLASDKAADNNDSRWAFNYSHNGTYKSNWLFDVDYSKTSDFNYFTDIDSS
IGNREDNNLLQTAEVSYREQYWDSTLRVRDFQPLTETGQGSQYRLMPQLE
FNYYRPNLPYELDFSMASSISSFANDASNKPDATRVHLEPTLTLPFATPW
WSLTSEAKLLYTYYNQDLKSYSRDGIEETVSRTIPTARIHSGLYLERDTS
IWGQDYTQSLEPQIQYLYVQDKDQSGIYNPVNDDGGGYDSTRLQQDYYGL
FSDKTYSSVDYVAPANQFTVGASTRYFDGNFKERFTLSLGQIFYIDKPTV
DDEVESYSATALETEFNYADWLFFKSSMQYDASDKEVQIANGAIEYRENG
VYIQPNYRYVSSSYLDKYVTNPNSVNDDGDQDGISQLGLSTGFPLNGGLS
VRADYFHDLNVNKMVEGQVGLTYRSACWLIGLTYNKYASSSLGSSNTEYD
NNVSLTFSLLGLQGAKPFGASSDTSNAMSYGNSFSLNN
>PBPRA0450 STY3364, putative outer membrane protein TolC
MNKLLPLIISVALGSFSQTALADDLANIYQQAKQNDPQLLRAASDKDSAF
EAINSSRSSLLPQINLTAGYNVATLDGDADGFNGGLTLSQSIYNRSSWIN
LDIAEKVARQSDASYAASQQDLIYRVAQSYFDVLKAMDDLAFVRAEKAAV
GRQLEQTKQRFEVGLSAITDVHDAQAQYDTVLADEILNENALTNSYEEIR
EITGQAHTNLKILDTARFSASAPQSNVESLLQDAANENLTLLTSRISQDV
ARDNISLAESGHLPTLSFDAGYNYDDKISITDEGTLTAGINLNLPVYTGG
RTTSEVKQAQFNYVSASEDLEGSYRGVVKDVRALYNNINATIGAIHAYQQ
SVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANRQLSSSRYQYIIS
QIQLKQAVGSLNEQDIIDVNKGLIAAKK
>PBPRA0353 VP1461, Putative glycosyltransferase
MEHITLQVVQHLQPGGIEKLVLNLARFASPCHKVYIVALEGNKKAAIKQW
PELRTFESQLFFLNKPIGMNISTIIKLKKLIAKLNVTMLHSHHIGPLFYS
RLALLGHKATHIHTEHDSWHLADKKQCRMTRYLLNTNRVKLIADAPRVAY
QLEKILLLSPDHVICNGIDTQYFTPGNQLIARKQFNLPLDKKLIGCAGRL
VKEKGIDTLIRALHDLPKDHHLVIAGDGPQSLHLRAEAQKWLVTDRIHWL
GYCAQMRNFYRAIDIFCMPSRQEGLPLALLEAQSCGNSIVATTVGAIPDL
ICPQTGILVPPDDETALTKALIQVLEQDPNAANQTVQFIQHQADVRAMTA
AYEALSC
>PBPRA0354 VP1462, hypothetical polysaccharide export protein
MRHVLFARLYPLLHALWRYRYLILIPIIIMPILMTTGGLFKAKRYYSETT
ILVQESALLNPFLEDLSISVNLKQRIKALQVIIHSRNILKNVTHDLNLAP
PDDLLQTDNMINLLRKNLSLSLLGNDLVQLSLIWQTPSEIPLILNKVSDV
FKEKLRAPGRASVDGSELFLQRQLETTQLDLELAESALAKFKAANANNLP
QLQGAKAQNDLQLANQTRETELNLLQAKSKRANLYQRLASTNPIVGILEQ
EIVKFEAELAILRASYTDQHSSVKGVIRRLNRLKQERSRLVDEQQTLNPQ
EINQLWQRIANSNQSNDPTKQPILLSQFEKLQHAESQIQALSEELTLLKE
QTNELSEKRMEFADLEKQLKILQRNYKVKSRVYNQLFERYEMAKITGHLG
RFEEPEKLKVIVQPIEPKKPLNWPWWINSCLGIVVGFGLGASLVGVVILF
DTRLYQTNHIAKLTQSQVLVRVPLF
>PBPRA0356 VP1463, hypothetical glycosyltransferas
MEFLVFGEDWGRHPSSSQHLFSVLMHDHSVTWINSIGLRQPNLTMRDLKR
INEKITTALTNYEPPAISIKPRKIIKPLVWPLAKSSNMLKINQFLLRRQI
PLKKYHRIIWAALPTAVDYLEISESDLVIYYCGDDFSALAGVDHQYVAEA
EQRLIQVSDIILTASPTLQQKFPQDKTRLLPHGVAINNFKQPTSKPTEIC
ADQPSIGFYGSINNWLDMELLKSLATSRPHINFYLVGREDIDTFKLKQLS
NIHLLPACPHNQLAGYLQHWSIAILPFVDNPQIQACNPLKLREYLASGCP
VISSNFPAATEYQPLVTIATTVNQWLEAIDKLSQLSELERQHYANRAQDK
VKDESWENRAQEVLQLISSTLKQKKYSS
>PBPRA0357 VP1464, Putative membrane protein of ExoQ family, involved in exopolysaccharide production
MKRCNQLWIAFGGCILTYVAWAQLGTNSLLLCAIIIFPFVINHSFTICVF
FILFSYFRLHEAFPVLMPFHIPLLLATFSIAGLCIHLWLKRDEIQWHSLQ
SFFLLFSFWVFISCLFATNRAEAFATFNSSYIKIIIMVFAISWLPTKQKQ
LKSIPILLILCGVSLSIIALYNQINGIGLVEGTRVTIGRDIGSILGDPND
LSLALLFPLSFALTNVFHGNKAQRTMNVLFLIILISAIIATQSRGGLLGV
TAAFFTLMLLRSRSIVIPSMISSIGLVILVVFAGISDRSSGGSAETGVDE
SAMGRLFAWEAAFRMALANPFTGVGLENFYFNYFFYSPHWDGKNHAVHST
WFQILGETGFIGFTLFICLLIGTFTLSYRLLSRLRNHEMKPIAEGLWIGL
ITFCVSGTFLTQGTTWPLYILISLLIALDRLTSNVTTARSISTQ
>PBPRA0421 VV21321, hypothetical protein
MKLNRKLLLVPAILFGIMVLVVAIKWRPSPSVKAAASRERAVDVIQLQQQ
SIAPLVSGFGRIKPKVEWQAIAEVTGKVIYRHPNLEKGRVMDAGTVIIKI
DPLDYELTLAQAEADLRSSQALLAKLVQEEENLKSTLKIEKNRLVISKKE
VTRKEELRRKGLTSQSELDLEKQSWLSNQKTVQDIENQLFILPNERNVTL
AQLYVNESRVAEAKRSLEKTVITLPIDVRISNVDIEQNQVVNLQQSMLVA
YGIEKVEVDAQVALHDMQVLASSLTQYTAHADGRPRADQLALTASIQLSS
GSFQQLWPATVTRISDTVSVTQATVGVIIEVEQDYSALVPESAPPLVNGM
FVEAKIEGQANLHWVIPERALHGDKIYTVDNNALKIQTVTVLFRRDGMVV
VGGDLVDQQLLILNDLLPAVSGMAVKVVTRNGKKIDPNNEALGDTAQ
>PBPRA0600 VV2720, ompL_phopr porin-like protein L precursor
MNKKLIALAVAAASISSVATAAEVYSDETSSLAVGGRFEARAVLADVNKD
ENVTNTASSEVSDKSRVRINVAGKTDITEDFYGVGFFEKEFSSADSDNDE
TRYAYAGVGSQYGQLVYGKADGSLGMLTDFTDIMAYHGNEAGNKLAAADR
TDNNLSYVGSFDLNGDNLTVKANYVFGGSDENEGYSAAAMYAMDMGLGFG
AGYGEQDGQSSKNGNEDKTGKQAFGAISYTISDFYFSGLYQDSRNTVVNN
DLIDESTGYEFAAAYTYGKAVFITTYNFLEDSNASGDASDLRDSIAIDGT
YYFNKNFRTYASYKFNLLDANSSTTKAQASDEFVLGARYDF