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Gene list

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COG category: Cell wall/membrane biogenesis
Gene type: CDS
Genomic element: megaplasmid

Number of genes found: 10

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# Silicibacter pomeroyi DSS-3, DSS-3

>SPOA0428 mandelate racemase/muconate lactonizing enzyme family protein
MRLQDLDIIVTAPPAPGWGGRYWILVKVTTDTGITGWGECYASSVGPDAM
THVIRDVFDRHMAGENPENIELMFRRAYSSGFTQRPDLTVMGAFSGLEIA
CWDILGKDRNRPVHALIGGRMNQRIRAYTYLYPLPHHDIAGFWTSPDQAA
ECAAEMVRRGYTAVKFDPAGPYTIRGGHMPAMSDISLSVAFCKAIREAVG
DKADLLFGTHGQFNTAGAIRLGQALEPYAPLWFEEPTPPDNLEDMARVAR
NVRIPVATGERMTTKTEFGAVLRAGAAEILQPALGRAGGIWEMKKVAAIA
ELFNAQMAPHLYAGPIEWAANIQLAAAIPNILLLESIETPFHDALIKGSI
RVDNGFVIPPDAPGLGIEVDEELARAHPFTGNDLHLNMQEAPCDYASGNA
FQGGAPTI
>SPOA0245 galactonate dehydratase, putative
MSKIKSVRTRVWNWTGPTVPPTGNFCTNASDVLWDKGDAMSSFRFHQWLT
CEVETDDGTIGIGNAALAPTVVKKAIDDWFAPMVIGEDPFDYAYLWEKMY
RRSHAWGRKGIGMTAISAVDLAIWDLMGKLTGKPVFKLLGGRTKEKIPVY
YSKLYSGPIDTMQAEAEEARKNNYPGYKMRFGWGPKDGMAGMRENLKRVE
AVREVIGYDVDLMLECYQGWNLDYTKRMLPKLVKYEPRWLEEPVIADDVE
GYRELNAMNIVPISGGEHEFSVIGCKDLIEKKAVSVLQYDTNRVGGITAA
QKINAIAEAFQVPVIPHAGQMHNYHLTMANANCMISEYFPVFDVEVGNEL
FYYIFEGDPAAVDGFLDLDDNIPGLGISITDKYLKHFEIQE
>SPOA0004 OmpA family protein
MAAALATVLALTGLTTAPATAQSTRTVIGERYVPTIWVDPDGCEHWVMDD
GAEGFMTPHVRRDGTPVCRRGALCGTMPADQFFATDSYRISSEGQARLRQ
FFQETGANGYIITGHTDSRASDAYNLRLSVNRANSVARVGRATGARIVDV
RGYGERDPRVPNTSAANMAQNRRVEIICVN
>SPOA0267 dihydroxydipicolinate synthase family protein
MSNIFTGTMPALMTPCRADRTPDFDALVRKGTEMIAAGMSAVVYCGSMGD
WPLLSDEQRMEGVERLVKAGIPVIVGTGAINTRSATAHAAHAQAVGAAGL
MVIPRVLSRGSSLVAQKNHFKSILSAAPELPAVIYNSPVYGFATRADLFF
ALRSEHPNLIGFKEFGGKDDLRYAAEHITSQDDQVTLMVGVDTEVFHGFV
NCGATGSITGIGSALPKEALLLASLSQKAAAGHPEARKRALELEDALGIL
SSFDEGTDLVLFYKYLLVLNGEEEYRLHFNETDALSDAQRNYCEQQYALF
RTWFAEWSKQGGVLAECM
>SPOA0244 dihydrodipicolinate synthase family protein
MSTRYTGIWPVAPTPFHDDGSLDLDGMKRVLDCLIDQGADGICILANFSE
QFLISDAERETLTRLCLEHVAGRVPMIVTISHFATQIAVERARFAKGLGA
DIVMMMPPYHGALLKGTAQQTFDQFKAVGEVGIPIMVQDAPLSGVDLPVP
LLVRMAQEIDMVRLFKIECPRAANKLRALIEQGGAAIEAPFDGEEAITLL
ADLDAGATGSMTSGMIVDQIKPVLTHYHAGRLDEATAAYGRVAMAINHEN
RQCGWQSCKAAMVEGGVIRSDFCRHPIDPLHPAIRARLIDLLRPLDPLVL
NWGK
>SPOA0378 mandelate racemase/muconate lactonizing enzyme family protein
MKLVKLETFSTEFVCFVRATAEDGAQGWGQVAPYYADITAQVLHRQVAPY
ALGMACEDIDAMLDIVRDREHKFPGSYLRRAMGGVDTALWDMHGRRAGKP
VCVLIGGTPGPVRAYGSSMKRDITPRDEAARLVRLRDEQGFDAFKFRIGA
EVGRDRDEWPGRTEEIVPTMRRAMGDDVALLVDANSCYSPARAIEVGRML
EQHGISHYEEPCPYWEFAQTKEVTDTLDLDITGGEQDCLMERWQTMIADR
VVDVLQPDICYLGGLSRTLRVARMAEAAGMPITPHAANLSMVTLFTMHLL
RAIPNAGKYLEFSIEGLDYYPWQQGLFTSDPYRIEEGHATVTDAPGWGVD
VNPDWLARSDYRVSELG
>SPOA0062 aspartate racemase
MTRRVVGILGGMGPEATILLQQRLLATVRAADDADHLPLLIDMNPQVPSR
IAHLIQGTGTDPGPTLAQMARGLEQAGATALGMPCNTAHHYAPAIEAAVS
IPLLNMVSLSVARARALVAPGARVGLLASPAVRMAGVFDAALAEAQLTPL
WPEDADRMLTAIRTIKAEGPVPAARAILTAAAEELADKGAALIFVACSEF
SLIADSLPSSPPVIDTVDVLAEAIRDHTLAKP
>SPOA0010 cutE, apolipoprotein N-acyltransferase
MSLLAGWYLWQRMMLALGLGAVAALGLAPMSLWLATIGALLALPALFLAS
PGWRQAAWTGWAFATGYFGHALAWIVEPFLVDVARHGWMAPFALVLMAGG
LALFWAAAFALAAAPARGPERRVMLLVLTLSLAEMARGYVFTGFPWAGLA
QIWVETDAALLLAWTGPHGLALATLAAVLPPGVALARGLGGRALLLRCVP
ALALGLAILAVDGARVPLEGSGKVVRLVQPNAPQHQKWDPDWYPLFLERQ
IRFTAAGTAPDLVVWPESALPYWLDDAGPVLERIAAAARGTPVLLGANRA
EGPRIYNALALIGAGGRIEATYDKHHLVPFGEYVPLGDLLEQFGISGFAT
RSGRGFSAGPGPVTLAIPGIGAALPLICYEAVFPRDARGTAERPRLLVQA
TNDAWFGTWAGPYQHLAQARMRAIEQGLPMVRVANTGVSAMIDPQGRITA
ALALGREGYLDVDLPPALAPTVYGRTGDLPLLVTLLVLLAAAARIQGRNL
LPNSD
>SPOA0140 glmS, glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
MCGVVGVAGVGDAQKEILGMLTNLEYRGYDSSGMAVLSNGRLHVVKRQGA
LSELKKELAKPSVPLHGSSGIGHTRWATHGAPSDINAHPHLSSDGKVAIV
HNGIIENYKPIKEQLLDDGYVFQSETDSEVIANLAAKLYQECGAGSYRQV
LSRLQSRLVGAYAVVIQFADAPDLIGGIRNECPLNYIQNDGQSAISSDLS
SLVSYGRDVFCLKDKQCVILGNEGVEVFDESGAESEAIAITINWSVEKAR
KDGYDTFLQKEIHEEPAAAQAFCREIRNHRAALDAYLKQHSFTKIVVVAC
GSASFSAIFAEALARQFELPVDVISEVGSEMRYNPPIISSTTLVLAISQS
GETADTIGAVKAAKQKGAQVVAFVNVAGSTLEFVSDLVLPLSAGPEISVP
STKTVTNMFLAVYFFLDAMRQALSGARDESWFTSAEDFRAALAEMVGRER
EFRSIADRISGYQSCFAIGRGVDFSIAKETALKFKETSYLHCEAMNAGEF
KHGSISLIEYGMPVLCILTDQAQRKKMVSNINEVRARGAQCIVISDLQPT
EIEDAEAMTVITVPAVGPVWNTILTLVVAHYISFLIGTLRGIDVDRPRNL
AKSVTVE
>SPOA0137 murA, UDP-N-acetylglucosamine1-carboxyvinyltransferase
MDSILVTGNGPLNGQIPIAGAKNACLTLMPATLLSDEPLTLTNAPRLSDI
KTMTLLLQSLGAEVSSLQDGKVLAMSSHDLTSHTADYDIVRKMRASNLVL
GPMLARLGQAVVSLPGGCAIGARPMDLHIEALEALGAEIELRDGYLHAKA
PGGLKGAVHEMRFASVGATENMVMAATLAKGTTVLKNAAREPEIVDLVRC
LRAMGAQIEGEGTSTIEIQGVDRLHGATHQVVTDRIELGTYMLAPAICGG
EVELLGGRLDLVGAFVEKLDAAGIDVAETDKGLKVSRRNGRVSAVNVTTE
PFPGFPTDLQAQMMALLCTAEGTSVLEEKIFENRFMHAPELTRMGARIEV
HGGTATVRGVERLKGAPVMATDLRASVSLILAGLAAEGETLVSRVYHLDR
GYEHVVQKLEAVGARIERIKG