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# Nocardia farcinica IFM 10152, IFM 10152

>pnf1660 putative recombinase
MADAAKRALQHAAVDRLAVLDQHGDLSSDHVRLTAQTLGVTERTVWRWLA
DRRGAVRKDERRARFRIDAQLRVRFAYWRGNASALHRELRERERAGGPPA
PSLATLHRAIREDMTRGDIAGIREGERSRRKFDVFLKRPSTYRNAAWEAD
HVEAAVEVDVDGRLMKPWVTWFVDTEHCVIMGVAVTPKTPNREAILAALR
AAILRTPPYGPAGGVPTLVRIDQGKDFLSRTVSDAMGAFAVRVVDLPGYT
PHLKGSVETVNGAVERMLIAEMPRYTHAPVGMNGTPTDPDAPALPFEVFV
ADLLGWVNWWNTTTEHNIDRLDGSSPLESWLADPTPLHELDANKLWMFTL
EDDRAHRKITTKGVARGRGRHYVADWMVGMVGARVRLRYMPNHDHEVEVF
DLASSRHLGSAWLADQATGEQIGRVRRARDRKAAQLRRDLKTAEKARRTR
YAAVTTVAPAQRLGAMTVAEVEAELGDEDYTELASLARPNLIPHSPPAPG
WVLPVDLDAPEPQKKGRTR
>pnf11080 hypothetical protein
MFTPVELATLRCKVEDEAYSYGGYNRPLEIFNPGTAPRYLTEGPLKSLSV
GERFGPTWLLVESYLRAHPDLYDETPSSVEARQAHRSAAAKSLTTEAAEH
FRAGRLARARELVDQAELANPYETGTYDGIRSRIDRLAGIVDELGLSRPQ
ERFDGLPGGKQAQVSVGDHSFSLEPRGGGRWVVYPKTGGAEDQSTLAEPM
PTSEVMPRIRAYLASLPDPQNPTPAAHAPSAATTAAAQRDPGNPTTPGDA
PAEPLPIVIEHTAEDTLVRNTDKNNLQLRQALHDAKFNWSRPQRFWYQRR
ATDFAVRTRRVGYLRASLTRLGLPFTETNPAREESTTLTAAGVAEAAAPE
SAHEQQTTAETQHDSTAESAAAAEVSPTASGTPTPPLSSPDVTGNTTTAT
PTSQTESPADRPAGTAEVRVPERPTAPQVDVPRSTQRRIEANLAAARTLQ
LVEAESRPPTAAEREVLAKWTSWGAAPQIFDAEREEFRSDAESLRALIGE
EGWKQANRTVLNAHYTDPMIVRAMWDHLRALGFTGGQVLEPGCGAGAFIG
HAPEAASMTGIELDSTTARIAQVLYPHASIRVESFADTRLPEGHFDAAIG
NVPFSSARLHDPVHNAGEHTMHNHFILKSLALTKPGGVVAVVTSSFTMDN
KNPAARREIAAQADFLGAIRLPNGTHRRVAGTDVLTDILILRRRDGEARR
LGGPFELAVTAELPLTRGQGETESVLVNEYFLNNPEMVLGELRAGTSVYG
GLSVEVLDRGDLEQHLRAALARIAERALSEGIAHQPRELASGERRAAAAA
PGDPNEFPGHLRTTASGFEVLHTDGTYSELKVPSTQADELRALLDLRDTA
VALLENEAASAEDSDEIEALRTRLNQRYDRYVERYGAINRCSWHPTGRVD
DAGEPVMSVRRPPVMRVFRDDPHAPVVLALEDYDATTDSAVKMAIMRQRV
VAPRSPRLGADTAEDAVAICLDTHGKIDLPVIAGLLGVDDDEARVQCRGL
IYPDPADNGRYVPAAEYLSGNVRVKLDQAREAAAANPETYSDNVTALTAV
IPPDLGPAEIDARLGAVWIEAPDVQAFLNEILNDDTITVEHTKAGEWKVT
GGRRGILSTQEFGTSRVPAPKLAQALLRQAPIRVYDPDESGEARIPNPTE
TEAANEKAEQLNERFSEWVWENPVRAARLSEEYNRRFNNLVLRNYEADGK
MLTLPGLSKVYTPRPHQRAAVARMIAEPNVGLFHAVGAGKTLEMAMGVME
LKRLGLVNKPAIMVPNSMLDQFAREFLQAYPQARILAAGTEDLAGEKRRQ
FVARAATGDWDAIILTRGSFQRLEVSRETAHWYFDREIEPRRQYLAELMS
GSAKRSVVKRIEDAILKSEEKLKKKLGGPTDPGITFEQTGIDYIVVDELH
DFKNLATDTQIESAAIAGSQRAQKLHMVVEYLRDKHNGRAITGATATPLA
NSITEAYVVQRYLRPDLLEGAGIRNFDEWAATFGKTKTELEMSVDGNSWN
LKTRLVGFRNVPELQRMFHVAADVKLPEDLNLPVPKLARRADGQRAPEVI
SVPATETQLEYVRELGHRAQMVKSRAVDPTRDNMLKISSDGRAAALDLRL
VKSLGLTPGTAEEQGSPTLTTAEGAAIAGYLHSKSPSPSTARYVALFAQR
GRHESQRQESQEIGEEEFGLKLEAAADWMFEKWQAAKDQVYLGRDGQPHP
RRGGLVVAFCDLGTPGEDWNAYDELKAKLIARGAPPELFAYIHDAKNDKG
KAALFTKARNGSIQFLFGSTSKMGVGVNIQDRMVAMLHVDCPWRPADIEQ
RDGRGIRQGNQNEEIAVGRVVTEGTFDARMWAAQARKAAMVNQFMKGSLT
VREIDDIGDAALNANEALAIASGNPLVLEKAEIDIEVTKLERLRRAHQRS
QSMLQIRIRDANDAIPKLEAEIDAYTRAIEHRRPTKGDAFAAKVSGRFYD
HRGDAGDALAARLLKLIEDPRAVWKEFEDHGVAEIAGFTLDARNVPTGRA
ALVSVVFSDIGDDVYVTLDKATLQKGGTAVMLRLENAVNGLDKRLEVATG
RLETERTERERSELRLGKPFEHSERLDALRERQKEINKELLGSKETETEN
ASTDPAAAPGEAESIRSAAMHDAAAMVHQMGGAAVVSGANGITIISDRGG
RAR
>pnf1950 putative recombinase
MRSLRETRSLVTDEELADFELDVLSEFVLARASSGVGDSTIRGDTTHLGQ
VRQWFGRPLWEMEPQDADRYFGTVLRRVSSSTRAARARTVVSYFEFLEIR
YKVVLHEMTGRVVECPIDEVNRPRMSVDTMVRIPPTEAELEQLFTGWRED
LVTCRKFAPSARNYMVARLAADVGLRVNEACMLDLDDIRWELGRFGKLNV
RHGKGAFRSGPRQRLVPLINGADTALTWFVEDVWAQFDADETLPRAPLFP
SERRRAGSSGTRVTRDVIRRALGGAVDRHLPTWSGRLTPHVLRHYCASQL
YRTGVDILAIQELLGHSWITTTMRYVHPYGTRVEDAVTAGHKRAAARWEG
LIR
>pnf1910 hypothetical protein
MSVVVAVPELRLVRSDDYSATVPGVWRLQRCSYYIGRSAIVGGLALPEGL
DVAALCARNATVEGQEFLINSDGRVVVEVNAFFASRRMRNRSASTREKYA
RGLCVWLGYLDAVGGCWRGVGPEDVDAFKFWRMTDEANPLRVAGSSVSDN
IQAINAFYEWAQERLDVRNPVDRRLASWPRQGPLGRAEPFVATPHVVRDR
DVKWLDQGGYACWRDLGLRGLDRSGRELRGWRGRNSQRDCAFTDGLYGTG
LRLSEWATLLTVELPADDESRGYYTCRLASSCGKGGRGRRYWMPRSVLVD
VLSYVESGRAAAVGRARAKGLYDQVSDPLLLVGQDCGRRVRLRAGDGAVS
DVALDTLNARTRARIFRQTRTGLEPVSLWLNETGLPRLAAGWEHTFTQAN
ERLARAGLGSVSATAHMLRHSFALRWFSVGRLIYEQRFAHLSSEELRDFR
AQFGDTWYLVKTLLGHADIAVTMDVYLEPFRDLDVSLLIEHAHGAGMSAL
MAEMFSRHPQVITRPAGVGA
>pnf140 putative recombinase
MRVWMSVYTAKLLHMTSKEIEVYRPAAAPALTDAEIDHIREVLKPLGMAD
VDSGAELTVAPLPSLSSEDVRLIGESTATARARNTIRSYATDWRRFERWC
AANAARGHQALPAHPLTVALYISEAAALRDSKGRRRYAPPTLTRWVAAIG
DHHRAAGYPHPGSARIVAGVLTGIRRACRAKGERRPERAEPVLVDDVREL
VTQARRQAESDAQRIAAHRDAALLLMGFTGAFRASEMTERWLEDITPHRL
DGLHVRLRISKGSQEEEVVVALPRGSEPATCPPCAWRRWLDLVAAHDAGG
RVAVQQVLSKTGDGCEQHVCRGRWPELTNPRNPAFRAVDRHGNIASTALT
AEAVGDMLRRRLMAVGYDKETAASFAGHSLRSGFVTQSYRLGASDYEIQR
QTRHKSVAMLRVYAREHAPLVGNAATRLPW
>pnf1100 hypothetical protein
MLELMDWFCGAGGSTQGASKVPGVCVTRAANHWDKAIETHATNYPEADHF
LGDLSTEEAKAQIVKWPVADIFWASPECPQWSSARGKKRDFHNTLQGDLL
DLQRDEEADRSRALMEEVPMYLRGVIERGGRVRAGVVENVVEVRQWDQWH
RWIGEIRALGYGVRVIALNSAHAQPVRTPAAPQSRDRLYVAYWDLKLGRT
PDWNKWLRPMAYCAECGWVQALQAFKRPGADMGRYRTQYFYRCPRYTCRN
AVIEPPVLPAAAAIDWTLPGTRIGDRDKPLAPKTMERIRVGMRRYASMVP
MMVPAGGTWRDDATQVTGPMAARTTRENDGLAIPQPFLALLRSDRPRTIG
LHEPLATVVADGSNHGLVVPPPLMIPMEGRDGKEAQLASMPLRTQTTRNE
TAVAFLPFVAELRGGSSDARPVTEALATVTASGNHHGLVTPPTPPTGMSP
ELWNSLLLPYYGNSTARPVSDPMGTLSTRDRFALVDMITERDIENTRFRM
LEPHEIQDAMAFRKDYIVLGNKRQQVRQLGNAVTPPAAEILISALVEAIT
GEELDRYAPTA
>pnf1210 putative resolvase
MLIGYGRVSTADQNPAHQIDALRRAGVEPGDIHIDTASGAKASRPKLDLV
LTLARRGDTIVITRLDRLGRSMLHLVNLGADLRARGIGLKVLEQGIDTDT
AEGRAMFGMLSVLAEFQRELIVANTRDGLEAARARGRTGGRRPKLTVHQI
EQAQRLYDEGRHTVQQIADILGVKRGTLYGHLDKNSIGTRPHSGPATPLP
TTSAPAAVVVDQADPAPGIAPAITETATATPQTLGVPAGDPTDGRPGSPG
GSSAVVTEAAPTGLVDLGGLVPEPDPIRPLPAADADEHAETNSSTREFAR
ERPNLAWRLKQTARMNLPEPPAVCPNDACGYTAHETSERGRLLEDIKVVW
LEPADDGGLIEARHCHRCRPREVPIADIECAACDCGGPLLTGVYATELRD
TGEIPALVRRWLSVRRWRVTDAGPVCPDHPDS
>pnf1970 hypothetical protein
MTATSCRECGGRIEASTCPRGGRPRQYCLTCRPSKTAERRAEGAKDYRDG
SCVGCGTQLERAARTIGRPRIYCDACRGRRARTPSRSRRRNDAGPAQDNR
SEAYRDRRCTRCDAPIEVDGQRKGRPRIYCDGCFGRRVHEQRRHRTRPRS
LDGLRFAEVFGTITGRVEHEVLERLFDTARVGRWSVATVQRRSEELRRVL
ATAGDEPISLSQVRAELGNVWQSRIAARVLDQCGLLIDDTESPTRQWIDR
RTAELPPGFRDDVRAWLVVLHEGGQRARPRAEATLHAYYSRVLPPLTEWG
STRSHLREVTQADVSVALNRLNGHKRVGTFVALRSLFRFAKRHRLIFLDP
TRRLRAGAAPSRVLLPMTTGQVDAVTATAVTPLQRVVVALVAVYAVRAHA
LRQLVLDDLDLARRRIRIGGSVHQLTEFTHDVLTDWLTYRQQRWPGTPNP
HVLVSSDSVLGNSPVEDYYLTWHLSLLGIQLEHIRGDRILEEALSTDTDP
LHLTIMFGLSEKSAADYARLARGITERPIEAVSHYPADWD
>pnf1170 putative integrase
MAGDSSVADRGVLTAEEARWQVAVQRAEVIGRLAQGDRVSVAAADEAAAE
LGVTQRQVYALVKRWRAGEGVASDLLPRRSSGGRGGERLSDEVEEIVRAV
LRARYLTRQRRSVAVICREIDRECKVRGLRPPSRSAVQRRISRLDPVKTV
TAREGQGVARSRRPAGGVAPAVTGVLERVQIDHTPADVIVVDEHHRLPIG
RPYVTAAIDEATKCVPGLVLTLEAPSATSVGLCLAHMAIDKRAWLERIGV
QAVWPMSGKPVQLYTDNATEFKSEALRRGCGQHGIAIDYRPPGAPHYGGI
VERLVGTMMRMVHELPGTTFSDTRERGDYDSDAKAVLTLAELQRWMALAV
ACYHGEPHDGLGGRTPGGVWAEKVAAHGAPPTVTNETAFLVDFLPVERRS
LRRTGFVLDHVQYYSDALKPLIARREQLEKVVLRRDPRDISRIWALHPET
GEYLEVPYRMWSRPAISLWEQRAAVARLREQGRAEIDENALFAMVEQMRH
ITADATATSRRARRNTERRKATPARSRAQAIPPAPPVPTPGAAPVAVAPF
EVIEQW