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# Photobacterium profundum, ss9

>PBPRA3070 putative DNA mismatch repair protein MutS
MTVKGLETHTPMMQQFLRIKAENPDTLLFYRMGDFYELFFDDAKRASQLL
DITLTKRGSSNGQPIPMAGLPYHAVEGYLAKLVQQGVSVAICEQIGDPAT
SKGPVDRQVVRIVTPGTVSDEALLSERRDNLVAAIYQNSKGFGYATLDIT
SGRFMLSEPETEEAMQAELQRTSPAELLYPEDFTQMHIIEAIKGTRRRPV
WEFDLDTARQQLTMQFGTRDLIGFGVEKTERGLSAAGCLLQYVKDTQRTA
LPHIRAITLDSKDHSVILDAATRRNLELTQNLSGGFDNTLASVLDHTATP
MGSRLLKRWLHQPIRDTKQLNHRLDAIAAFKDTGMFIEVAEVLHHMGDLE
RILARLALRSARPRDLARMRSALQSLPQLADLLADIEQPRIGELAKYSAP
MDELCELLERAIIENPPVIIRDGGVLAPGYNAELDEWRDLADGAKKFLDD
LETREREQHGIDSLKVGFNQVHGFFIQISRGQSHLAPDHYVRRQTLKNAE
RYIIPELKEHEDKVLSSKSKALGLEKKLWEELFDQLLPHLERLQNAASAL
SELDVLANLAERADTLNYCRPELTDQTGIEIAAGRHPVVEQVLSEPFIAN
PTSLHHDRRMLIITGPNMGGKSTYMRQTALIALMAHVGSFVPAEAVKIGS
LDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSKSLVLMDEIGRGT
STYDGLSLAWASAEWLAEKISAMTLFATHYFELTELPSMMDGLANVHLDA
VEHGDEIAFMHAVQEGAASKSYGLAVASLAGVPKAVIKRAKAKLTQLETT
GHQQAIKNPSKAPREEQQLTLLPEPSDVEEALAKVNPDEMTPRQALDELY
RLKALM
>PBPRA3335 putative transposase
MSRNEPLAKAYYLKEKLQAIWKQSERISAEKWVDGWVDEASNSRIPMLKS
FTKTVVRFKEGILAYYEERMSSDPIEGSTIV
>PBPRA3352 putative DNA mismatch repair protein MutL
MPIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGG
SRTIRIRDNGKGIAKDELGLALSRHATSKISSLDDLEAIVSLGFRGEALA
SISSVSRLTLTSRTATQEEAWSAYAEGRDMDVQLKPAAHPIGTTIEVLDL
FFNTPARRKFLRTEKTEFNHIDELLKRIALSRFDVSITLRHNGKTIRQYR
ASQTQIQKERRLVSACGQSFLQHALAVELEHGDLNLSGWICTPQGSRSQN
DVQYCYVNGRMMKDKLINHAIRQAYEANLASDQYSAYVLFIEVDPHQVDV
NVHPAKHEVRFHQARLVHDFIYQGIQSALQQGAMDDQQSYHAPQRASAIA
APYADTASESMESAHSHQIAEAAPALQAIADTPNYPNKAQPEEWLSSSVA
SKSASNTQHQERNDKRVRDYRAVERSDYMSDKRISGSLSPQGKSRDESGR
SSQSNYDAPQRRNNAGYQPESAPSKQEVAAYQRLIQTPPSIPSHASSLGS
PAKASTTLTGESRSTAVTRQNVVDTQVGVGLGKALSIVAERYLLVSRHDG
IHVLSLDHAQRLHHKGQLRLAATEGLKPQPLLIPHSVPVEPDLITCAEQH
ALLLKQLGINLKAKGKSGLIILSVCLPLRQQNLQQLIPNLLTYLLSIAED
PDAQGWDKLWDWLATQCVMPVDTFSLSQAIQLVTELEQLWGSDIEQHNQY
LLRPVDVSTAIEAFLYE
>PBPRA3087 putative DNA repair protein RecO
MEGLQRCFVLHYRPYSETSLILDVFSEDYGRLTILSKGARRKRSNLKGTL
QPFTPLFMKWTGRGSMKTLTHAEPISISLPMRGYILYSAFYLNEVLVRVL
ENDTPYPVLFMDYLNALRELAQADNPEPALRRFELALLHHLGYGIDFLHC
AGSGLPIDDLMTYHYREQKGFIASMMTGHFTFTGNQLLAIAARRFETPDQ
LKAAKRFTRIALKPYLGGKPLKSRELFIPRTRNIGK
>PBPRA3207 C0117, hypothetical mutator MutT protein
MEKKTVWISAGIILNPQGDQVFITRRADKAHQGGFWEFAGGKVEVNETAE
QAVVRELFEEVGIRVTEIEHFMALDHNYPDKALKFDFFLVKAFSGEAYGK
EGQPSEWVNLCDLANYRFPEANDAVLAKLASLKSRDPSL
>PBPRA3331 C5026, putative Replicative DNA helicase
MADNSKPKKYKDTQMDAIKMPPHSLEAEQSVLGGLMLDNEKWDRVAEKVV
SKDFYSRPHRIIFEATAALLEGGQPLDLITLSEHLERADKLEDVGGFAYL
AELAKNTPSAANIGAYAEIVRERALIRDMIAVANDIADAGYDPQGRTSED
LLDMAESKVFAIAEQRTNDNEGPQSVDIILEKTLERIELLYQSPQDGVTG
VSTGFSDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMDQEKPV
LIFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILME
KKNMFIDDSSSLTPTELRSRARRIARDHGGLSMIMIDYLQLMRVPGMQDN
RTLEISEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPINSDLRESG
AIEQDADLIMFIYRDEVYNEESALKGIAEIIIGKQRNGPIGSVRLTFQGQ
YSRFDNYAGPAFDDE
>PBPRA3154 ECS3837, putative A/G-specific adenine glycosylase
MLQQTQVATVIPYFERFMERFPTVQDLAAAEQDEVLHLWTGLGYYARARN
LHKAAQIIVSEHNGMFPTDIDQVQALPGIGRSTAGAVLSLSLKQHHAILD
GNVKRTLARCYAVEGWPGKKPVENALWEIAEKNTPDSGVERYNQAMMDMG
AMICTRSKPKCELCPIEAMCEAKAQLRQTDFPGKKPKKVMPEKQTWFAIL
QHGDEVWLEQRPPVGIWGGLWCFPQHDTDDLRALVTQRIGSESHIAETEQ
LHAFRHTFSHYHLDIVPIRMQLSTLMNVVQESGKGQWYSLTTPPKVGLAA
PVQQILEDLRYELNHSKTL
>PBPRA3136 ENDA, putative extracellular deoxyribonucleaseprecursor
MNRPFTWLVLLLLPTTAFAAPPSSFSKAKRLAVEIYQDHPTSFYCGCAIT
WQGKKGLPDLASCGYEVRKQEKRANRIEWEHVVPAENFGRAFVEWREGHP
QCVNSKGKAYKGRSCATKMNPTYRSMQADLHNLTPAVGEVNGDRSNYAFL
PWNGNNGAFYGQCDMKIDFKNRRADPPEQSRGAIARTYLYMNQEYKMALS
SQQRQLMEAWNRQYPISTWECERDRRIANIQDNHNSFVLQACKKAGY
>PBPRA3338 PRIB, putative Primosomal replication protein N
MTNRLELSGVIAKDPKRSQSPAGVPHCHFVLEHRSYQREADLPRQVYCYI
NVVSSGKGLQVLTQDLAVGVHTKVAGFISYQTGRNGIGKLVLHADHIEII
CSGD
>PBPRA3106 RB787, hypothetical protein
MTLFEQHQLPCILESRLSKRYQTLIMEHMTVNSSNAPGVKSLRHHTQSWA
STQATWRFYHNEDVTFPMLSGPMLGLARSGVKESQSRYVLMAHDWCHINF
AKHHSKLDKTKMSHALDVGYELQASLLVDANTGAPIAPAGLNLLTSNGIY
QCRSQELQPKQSHLDSLFDSIHWQEQLHLDKPLVHVVDREADSAKDLRRL
GSVHWLTRTKKGSTFRHEGQFKTAEIISRTISPDLKGVISLRGKEGYLFV
GETTVELHRKSEKLASAAPTCRFVMSLVTDDEGKELARWYLLSNVLDVDA
TEIATWYCHRWNIESWFKLLKSDGHQLEKWQQTTAESILKRLITASVATT
LIFKLYSDSSDEANEFKGFLVKLSGRLTKRTKPVTQPSLLAGLWVFLQMC
EVLDTYTMDEINAMRQIASSFFAQSV
>PBPRA3068 RECA, putative RecA protein
MESRMDDNKQKALAAALGQIEKQFGKGSIMRLGDNKTMDIETVSTGSLAL
DIALGAGGLPMGRIVEIYGPESSGKTTLTLEVIASAQKAGKTCAFIDAEH
ALDPIYAQKLGVDIDQLLCSQPDTGEQALEIVDALARSGAVDLIVVDSVA
ALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKNANCMCIFINQIRM
KIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNETRIKVV
KNKIAAPFKQAETQILYGQGFNRNGELIDLGVKHKLVEKAGAWYSYKGNK
IGQGKANSCKHLVENPAIAEEIEKLLRDMLLSPVGEEVEKADVKKDAKKD
AAEALK
>PBPRA3297 SO2276, putative transposase
MKTILKIPGHIGLESVDVWFQDEARFGQQNTTTRVWAKTGTRPRVIKQQQ
FEYAYLFGSVCPSRGIGEAIVVPWSNKDAMKLHLQQVSSATEKGRHAVVI
MDGAGWHTEDTAHSFHNISIIKLPPYSPELNSIEQVWSWMRQHHLANQAF
KDYDEILDKVCSAWNSFLSDTKRVTRMCARSWISLTS
>PBPRA3299 SO2276, putative transposase and inactivated derivative [Vibrio vulnificus YJ016]
MKTILKIPGHIGLESVDVWFQDEARFGQQNTTTRVWAKTGTRPRVIKQQQ
FEYAYLFGSVCPSRGIGEAIVVPWSNKDAMKLHLQQVSSATEKGRHAVVI
MDGAGWHTEDTAHSFHNISIIKLPPYSPELNSIEQVWSWMRQHHLANQAF
KDYDEILDKVCSAWNSFLSDTKRVTRMCARSWISLTS
>PBPRA3298 SO2874, putative transposase and inactivated derivative [Vibrio vulnificus YJ016]
MDSLNNIDFKSLASKQTSIQMKMRFLALAHFQDGHSRTQIAKYLKVSRTS
VNKWIQVFLEEGLDGLKEKPRTGRPSFLSHQERQLLAKYIEENAAKPDGG
RLTGHDIHNYITQTFGKAYHPDYIYILLKKMGFSWITSRSKHPKQCDKIQ
DDFKKI
>PBPRA3296 SO4533, hypothetical protein
MDSLNNIAFKSLASKQTSIQMKMRFLALAHFQDGHSRTQIAKYIEENAAK
PDGGRLTGHDIHNYITQTFGKAYHPDYIYILLKKMGFSWITSRSKHPKQC
DKIQDDFKKI
>PBPRA3289 SSB, putative single-strand binding protein
MELSMASRGVNKVILVGNLGNDPEIRYMPSGSAVANITIATSESWRDKAT
GEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYIEGQLQTRKWQNQQGQD
QYTTEVVVQGFNGVMQMLGGRQGGGQQQQQQQQQGNWGKPQQPAAAPQQS
VAPQQQQQAPQQPQQAPQQPQQQYNEPPMDFDDDIPF
>PBPRA3290 UVRA, putative excinuclease ABC, subunit A
MDYIEVRGARTHNLKNINLSIPRDKLIVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT
ITEIYDYLRLLYARVGEPRCPTHDVTLAAQTVSQMVDKVLELPEGSKMML
LAPIVKARKGEHVKALANLAAQGYIRARIDGEVCDLSDPPTLELHKKHTI
EVVVDRFKVRDDLQLRLAESFETALELSGGNVLICPMDDDQPAELLFSAN
FACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPDRVIQNGDL
SLSGGAIRGWDKRNFYYFQMLKSMAEHYDFDVESAFNELPRKIKDLILRG
SGKTEIEFKYINDRGDITVRRHPFEGILNNMERRYRETESNAVREELAKF
VSTKHCSSCHGSRLRQEARHVFIADTNLPTICEMSINETYNFFDTLSLVG
QRAQIADKILKEIKDRLTFLVNVGLNYLNLSRSADTLSGGEAQRIRLASQ
IGAGLVGVMYVLDEPSIGLHQRDNERLLKTLNHLRDLGNTVIVVEHDEDA
IRAADYVIDIGPGAGVHGGEIIAEGTMEDILNAPKSLTGQYLSGKKSIAI
PEHRTPMDPDKTVKLLGATGNNLKNVDVEIPVGLFTCITGVSGSGKSTLI
NDTFFRIAHHQLNGATTGEAAPYREIQNLEHFDKVIEIDQSPIGRTPRSN
PATYTGIFTPIRELFAGTQESRSRGYKPGRFSFNVKGGRCESCQGDGLIK
VEMHFLPDVYVPCDACNSKRYNRETLEVRYKGKSIHEVLDLTVEDAREFF
DPVPAIARKLQTLMDVGLSYIRLGQAATTISGGEAQRVKLARELSKRDTG
QTLYILDEPTTGLHFHDIQQLLVVLHRLRDRGNTIVVIEHNLDVVKTADW
IIDLGPEGGNGGGEIVAAGTPEQVAQVAGSHTAHFLKPLLP
>PBPRA3228 VV0603, conserved hypothetical protein
MVSPLPLNKRQQGQVYEVMAEQYLQRHHLKPVERNFTCRSGEIDLIMRDK
SCVVFVEVKFRKQNHFGSAAEAVNWRKQQKLKRAALLWLKKNSLSTEHTE
FRFDVVAIQGPDQQIEWFTNTLVEG
>PBPRA3168 VV2757, hypothetical ATP-dependent helicase HrpB
MSQLPIDTVLPDLLTTLAISPQLILKAPPGAGKSTRLPLELLASRSKAIR
GGARFGRIIMLEPRRLAARNIANYLSKQLGERVGETVGLRVRGESKVSKA
TQLEIVTEGVMTRMLQQDPELKGIDLLIFDEFHERSIHADTALALALEVQ
EALRDDLKLLVMSATLDADALKGLLPDAGYIESYGRCFPVEYRYKSVSDH
YQLLESCCRETLQLLDAESGSILIFLPGAGEIKRLAGMLTERVADNVLIS
PLFGQLSNEQQQQAIMPAPKGQRKVVLATNIAETSLTIEGIRLVVDCGLK
RIALWDPKTGISRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEEQLSR
QPMTPQPEILRADLTSLAMELAQWGCNDASELRWSDMPPQPALLQSRRLL
QQLGIMDQRFQLTDVGKQTQTMGTDPRHAVMLIAAQQFDANHTSGSTLAM
TTAALLVALLEDPPRGMNSPDLHFQLNLLESGKLPRARQYQLRAKQHLAK
LNQSASLSLSISAEWIAPIMAAGYPDRIALSRGTDGRYQLSNGQGVMLPA
DEPMANEAMLVVADVVKTRQGDSRVFSCVATDSNRLQELLPHLFSEREWL
DWDDKKGRLTAEKHLCCGKLILQRSVMDTPDPAKASEALLNAIMRKGLSV
LPWNEKTSNLLTRARCAHEWLPDLGLPEMDDETLLADAEQWLLPFMTGIT
TLKSIARLDLKAALEARLGWEQAKTLDVVLPTHFQVPTGSRYPIRYQVGH
KPALAVRMQEMFGEKTSPQIANGRVPLVLELLSPAQRPLQITQDLAAFWQ
GSYRDVQKEMKGRYPKHVWPDDPANHLPTRRTKKYM
>PBPRA3140 YQGF, conserved hypothetical protein
MSNSRSVLAFDYGTKSIGVAIGQELTGTANPLAALKAKDGIPNWDDIGKI
LKEWQPDLVVVGLPLNLEGGELESITPRAKKFANRIHGRFGCVVELHDER
LSTVEAKAELFEHGGYRALSKGNIDSQSAVVILESWFERQYG