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# Photobacterium profundum, ss9

>PBPRA0206 putative formamidopyrimidine-DNA glycosylase
MPELPEVEVSRMGITPHMVGQTVTKIIVRNPKLRWPIPEEIQQIEGQVIR
KVTRRAKYLLLHTDVGYAIVHLGMSGSLRILPASIPPEKHDHVDLVLSSG
EVLRYNDPRRFGAWLWGLPDLDHKVLSQLGPEPLSNDFTAEYLQERAKGK
RTAIKQFIMDNKVVVGVGNIYANESLFSAGIHPKRAAGEISPEKIALFVD
EIKSVLAFAIEQGGTTLKDFKNADGKPGYFAQELQVYGKGGKPCPRCDNP
LSEMKIGQRASVFCSECQK
>PBPRA0243 hypothetical protein
MFNKMKISLSSCDITETIRNIALINEILLDLKLNDMVCLYLNNLDFLFKE
VLNNTHHLTSPNGVFFIWIGDIPTSSLTYIDVWINSISNEKISLWYDSQF
LLAGKLRKIIHSTYKLNNKDSKDVIQIQNYVFKEIKESMMNNNLSGDDAI
IDFVYKLDKGICITLKEKYNAIKRRYKHIGSYIDLVDINYFIKDVFLSNF
YYDCYIMEILLRYNLAAASDITRLSILYRYGGTYIDVDTLPSLEHVFKRT
NETLGNNILNKNIIDVFKSQLYIEKIKNNNIVKVDLLKATKKLYPALREI
NKYLPDLLIEDIEKLKVENLYEKHSIKKIDANLFSMSANKNSIGEFNNNI
ISAHSNSKSIKIVLNEMKKRYNYISEHGFDLLNSSTASLGKNDYYNRLKN
YRFDAIDNDDYVTLITSGPSLLLEVSIGLSYDILKMDYSTNQVSLSYALQ
TPHLGIGYTDQTMYTSDHIKSSWMKNKELEDTMV
>PBPRA0051 Hypothetical protein
MSSRPLKRVNYSIYLDPVNSNADRYAVGVMQGWAKDRKEMMSDPSAGVAL
HYSLHMHKNIYLAGMFLYLLSPALSNALAGSLTEERIKIDTLEQQLENCG
LALPSTKPSLPALDTHALIDELKAAVNMKSLMDEIQQIKAGLVESNTVTA
AVQNGLSESDIAALQQNLAAEIKAHSQHREIAELKALLKTQNQLIKSLSN
GQPLPEVEKSEPELDLSQQIANIQKVKKKGIF
>PBPRA0214 ALL3135, hypothetical protein
MKIEYCRSKSLNFGDDLNLWLWPKLMGDIFDDEDDNVYFVGIGTILTKKR
IEQQLKHAKKIIIFSSGAWGDSIPELDERCCVYGVRGPRTAKKLGLDDDL
IVGDGAYLLREVELPAVAKKYEVGFIPHHRSEDYVDWQEICKAAHVKFIS
AKQPVDTFLDELRSCNKIVTEAMHGAIVADAMRVPWVAAKFSPLFNEEKW
YDFAESMKIELNIHSLPFYTQHKMRVGKLIENGIKIVLSGLLKNEKWQSL
LFLNKNASEHELAILSDNVSFIAKNVEGILSLDEIVSTTSLKQLNVIKKI
IDDNK
>PBPRA0083 CBU1270, Transposase and inactivated derivatives [Azotobacter vinelandii]
MNSLTIGLDTAKSVFHAVEKNSRGRVLSKAKLTRAKLFTYFANKPPCTVA
LEACGASHYWCRVISAYGHKAVMIAPQYVASHRKGNKNDFNDGNAIADVA
QRDDIRTVPYKSIEQQDIQLLHRVRERLVRQRTALGNQTRGLLSEYGIVL
RQGVAHLRKELPFILEESNNELTELACRQFFLLHEELLVLDEKVKQADNE
IQRVALSHPISQRLMTMSGVGPIISTILLVALGKGEHFRNGRHFSAWCGL
VPKQHSTGDKARLLGISKRGNTYIRTQLINGARSALRNASNKNDQVSRWA
ASLAERIGFNKACVALANKMARFAWAMVHNGQDYQLKP
>PBPRA0080 CBU1270, Transposase and inactivated derivatives [Azotobacter vinelandii]
MNSLTIGLDTAKSVFHAVEKNSRGRVLSKAKLTRAKLFTYFANKPPCTVA
LEACGASHYWCRVISAYGHKAVMIAPQYVASHRKGNKNDFNDANAIADVA
QRDDIRTVPYKSIEQQDIQLLHRVRERLVRQRTALGNQTRGLLSEYGIVL
RQGLAHLRKELPFILEESNNELTELACRQFFLLHEELLVLDEKVKQADNE
IQRVALSHPISQRLMTMSGVGPIISTILLVALGKGEHFRNGRHFSAWCGL
VPKQHSTGDKARLLGISKRGNTYIRTQLINGARSALRNASNKNDQVSRWA
ASLAERIGFNKACVALANKMARFAWAMVHNGQNYQLKP
>PBPRA0202 CV3079, putative DNA repair protein RadC
MSLKLLPEESRPREKLLTRGAKALSDAELLAIFLRTGIKGMNAVELATHL
LAEFGSLRALFAADQTLFCLHKGLGPAKYAQLQAIIEMSQRHLEETLKEG
DVLTSPQHTRHYLSQLLRDRQREVFYVLFLDNQHRVIAGEVLFEGTINSA
AVYPREIVKRSLEFNAVALILAHNHPSGVAEPSQSDLRITRTISDALALV
DIRVLDHFIVGDGEIVSFSEQGWL
>PBPRA0283 DAM, putative DNA adenine methylase
MKKHRAFLKWAGGKYSLVEEIQRHLPPARKLVEPFVGAGSVFLNTDFEQY
LLADINPDLINLYNILKDDPEKYIEDVRKLFTPEFNQKEEYLKIREEFNK
TQDPYVRSLYFLYMNRHGFNGLCRYNKKGGFNVPFGSYKKPYFPEKEMYF
FAEKAKRATFVCEGYQQTFSRARKGCVVYCDPPYAPLSSTANFTSYTGNG
FSLDDQADLADVAEKAATEREIPVLISNHDTKLTRRLYHGADLSVVKVRR
TISRNGSGRNKVDELLALFKSQEKSPNC
>PBPRA0009 PLU0002, Putative DNA polymerase III, beta chain
MKFTVEREHLLKPLQQVSGALGGRPSLPILGNILLKVEEGYLSMTGTDLE
VELIAKLALEADFEVGAVTVPSRKFLDICRGLPDGAKIAVTLEGDRILIR
SGRSRYSLSTLPAADFPNIEDWQSDVEFTLPQGRMSQLIQSTQFSMAHQD
VRYYLNGMLFETDGSHLRSVATDGHRMAVCAIDLAQELTTKQIIVPRKGV
LELVRLLDNAEAMVDIQIGNSNIRATVNNFVFTSKLVDGRFPDYRRVMPQ
SSNKFVEASCDELRKAFSRAAILSNEKFRGVRVNLSKGEMRITANNPEQE
EAEEFLDVDYQGDDLEIGFNVSYVLDVLNTLKCDQVRLSLTDANASALVE
DCANDEAMYVVMPIRL
>PBPRA0011 PLU0004, Putative DNA gyrase, subunit B
MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDE
ALAGHCEDIIITIHEDNSVSVSDDGRGIPTDIHEEEGVSAAEVIMTVLHA
GGKFDDNSYKVSGGLHGVGVSVVNALSEKVELTIYRHGFIHHQIYRHGVP
DKPLETIGETDKTGTLLRFWPSEGTFTNVVFHYEILAKRLRELSFLNSGV
SIRLIDEREEGKQDHFMYEGGIRAFVAHLNRNKTPIHAKVFHFDFEREDG
IVVEVAMQWNDGFQENIYCFTNNIPQRDGGSHLAGFRGALTRTLNTFMDK
EGYSKKEKTSTCGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAV
ESVMGEKLSEFLLENPSDAKIVCGKIIDASRAREAARKAREMTRRKGALD
LAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGK
ILNVEKARFDKMLSSQEVATLITAMGCGIGRDEYNPDKLRYHNIIIMTDA
DVDGSHIRTLLLTFFYRQMPELIERGHIYIAQPPLYKVKKGKQEQYIKDD
EDMDQYQVSLALDNASLFATEGAPAITGLALEELVKQYNAGMKLIERMSR
RYPLLMLNEFAYQPRLSIEMLSDETAIEAWATQLVAALNEKQSGESQYRF
AIQRDEEKNVFLPQVIVRTHGVEYDYTLSYDLLNSKEYSKLADLSEAFNG
LIEDNAYVQRGERKQSISSFKEGLDWLIKESRRGVYLQRYKGLGEMNPEQ
LWETTMDPESRRMLQVTINDAVAADELFTTLMGDQVEPRRNFIEENALKV
ANLDV
>PBPRA0257 PLU4759, putative primosomal protein N`
MTPNIARVALPVPLDKTFDYLIKAGSFPVVGGRVKVPFGRQQLVGIVIEI
TDKSDFPIAQLKPIYTVIDQAPLWTSPLFSLLSWASHYYQYPLGDTLANS
MPGLLRKGRAASTGTLKYWAITEAGRDQPITALKRAPRQVQVLNILRNGN
RRHEALLAEEVSSATLKTLVDKGWITELQEKPRLVDWHKHFAITEEKPRL
NEEQALTIATINANPEFGCYLLEGVTGSGKTEVYLNALEPILAAGKQALI
LVPEIGLTPQTINRFRRRFNVPLETVHSGLNDTERLSSWLAGRDNQAGII
IGTRSALFTPFHNLGIIIVDEEHDASYKQQDSLRYHARDLAVMRANKENI
PIVLGSATPALESLHNAKTGKYHHLHLTRRAGNAQSARHGVLDVKGLYLD
AGLSAPLIAQMRKHLTAGNQVILFLNRRGFSPAMICHECGWLAECDRCDA
YYTLHQQSGELRCHHCGTQRPIMHQCNSCGSTQLNAVGVGTEQLEQQLAI
LFPEYKTVRIDRDSTRRKGSLEDYLEAIKNNEYQILIGTQMLAKGHHFPN
VTLVSLIDVDSALFSNDFRASERLAQLFIQVAGRAGRASKPGEVLLQTHH
PEHALLQALLHKGYDNFADNALIERKEALLPPYTHLALFRSEANNSDHVC
QLLQQIRGIFESSPLFNQDIFIMGPNPAPLARRAGRYRWQLLLQAPDRKT
LQRMLAIAKPAIQLLPLAKKVRWSIDVEPQDLT
>PBPRA0245 RB787, hypothetical transposase
MTVNSSNAPGVKSLRHHTQSWASTQATWRFYHNEDVTFPMLSGPMLGLAR
SGVKESQSRYVLMAHDWCHINFAKHHSKLDKTKMSHALDVGYELQASLLV
DANTGAPIAPAGLNLLTSNGIYQCRSQELQPKQSHLDSLFDSIHWQEQLD
LDKPLVHVVDREADSAKDLRRLGSVHWLTRTKKGSTFRHEGQFKTAEIIS
RTISPDLKGVISLRGKEGYLFVGETTVELHRKSEKLASAAPTCRFVMSLV
TDDEGKELARWYLLSNVLDVDATEIATWYCHRWNIESWFKLLKSDGHQLE
KWQQTTAESILKRLITASVATTLIFKLYSDSSDEANEFKGFLVKLSGRLT
KRTKPVTQPSLLAGLWVFLQMCEVLDTYTMDEINAMRQIASSFFAQSV
>PBPRA0104 RB787, hypothetical protein
MTLFEQHQLPCILESRLSKRYQTLIMEHMTVNSSNAPGVKSLRHHTQSWA
STQATWRFYHNEDVTFPMLSGPMLGLARSGVKESQSRYVLMAHDWCHINF
AKHHSKLDKTKMSHALDVGYELQASLLVDANTGAPIAPAGLNLLTSNGIY
QCRSQELQPKQSHLDSLFDSIHWQEQLDLDKPLVHVVDREADSAKDLRRL
GSVHWLTRTKKGSTFRHEGQFKTAEIISRTISPDLKGVISLRGKEGYLFV
GETTVELHRKSEKLASAAPTCRFVMSLVTDDEGKELARWYLLSNVLDVDA
TEIATWYCHRWNIESWFKLLKSDGHQLEKWQQTTAESILKRLITASVATT
LIFKLYSDSSDEANEFKGFLVKLSGRLTKRTKPVTQPSLLAGLWVFLQMC
EVLDTYTMDEINAMRQIASSFFAQSV
>PBPRA0091 S3908, putative ATP-dependent DNA helicase Rep
MKLNSRQTEAVKYISGPCLVLAGAGSGKTRVITNKIAYLVQHCDYKARNI
AALTFTNKAAREMKERVGKTLGKKEAKGLMVSTFHTLGLNIIRREYKALG
LKANFSLFDDQDQMALLKELTEAELDGDKDLLKLLQSAISNWKNEMLSAA
EAQAYAQSERDQLFAHCYELYQRQMKAYNALDFDDLILLPVLLLRDDQEM
RQRWQNKIRYLLVDEYQDTNTSQYLFVKLLVGERSRFTVVGDDDQSVYSW
RGAQPENLGLLQKDFPSLRVIKLEQNYRSTSRILRTANILIANNPHLFEK
TLFSEIPDGEMLKVITAKNEDHEAEKVIGELIAHRFLNNTGYKDYSILYR
GNHQSRLFEKSLMQNRIPYKISGGTSFFSRSEIKDIMAYLRLLTNLDDDN
AFLRIVNTPRREIGPVTLEKLGTYANMRGKSLFASSFELGLEQHLAGRGL
ENLQRFTRWIVEMSENIERGDSVAALRELVRDIHYEDWLYESSPSPKAAE
MRMKNVSQLYSWVTADLEGDNYDNEVKTLKEIVQRLTLRDMMERGEDDDE
ADQVQLMTLHASKGLEFPYVYLVGAEEGILPHQTSVDEGNVEEERRLAYV
GITRAQKELTFTLCKERRQYGELIKPEPSRFLYELPQDDLQWEVEKRPVT
QQERMQKGQSHIANLRAAMFKKN
>PBPRA0010 S4007, Putative RecF
MEAIHYLGHGRSFRSHLTSRVIRHEQQELFIHGRVLTNNQLELPLGINKK
RDGTTEVKVSGESGQKLSQLAQVLPLQLITPEGFELLIGGPKYRRSFIDW
GVFHIEPKFYNAWSRIKRLTKQRNALLKTARSYRELSYWDQELAVLAEEI
SVWRDEYLIAVKQKAAEICQGFLPEYEIQLSYYRGWEKETPYAELLKRNF
ERDCQLGYTVNGPHKADLRMKVSGTPVEDVLSRGQLKLMVCALRLAQGLH
LTEATGKQCIYLIDDFASELDSHRRALLAQRLKETNAQVFISAISNEQIA
DMHDENGKMFHVEHGKITAG
>PBPRA0187 S4077, putative ATP-dependent DNA helicase RecG
MSGQLLETIALTELSGVGAKMAEKLEKVGLTSVQDLLFHLPLRYEDRTRI
WPIAQAMPGQHIAVQGEVLNSSITFGKRRMLTVRIADDSGSATLRFFNFN
AAMQNSLAEGKQVKAFGEIKRGKFGLEIIHPDYSVFAESVSLTGEETLTP
VYPTTEGLRQLTLRNLTDQALSLLDKAAVTELLPEGLYDRQMTMAQALHV
MHRPTPDVSLDQLEAGKHPAQHRLILEELLAQNLSMLAVRSKSQQHSAWP
LAACDNPADSLKEKLLASLPFSPTNAQQRVVADIEADLIKPLPMMRLVQG
DVGSGKTLVAALAALQAIQHGFQVALMAPTELLAEQHAQNFAQWLNPMDI
QVGWMAGKLKGKARETELARIENGEAKMVVGTHALFQNHVSFKNLALVII
DEQHRFGVHQRLELREKGANEGHYPHQLIMTATPIPRTLAMTAYADLETS
VIDELPPGRTPVQTVALPDSRRAAIVERIRTACLNEGRQAYWVCTLIDES
EVLEAQAASDTANDLTAQLPELNVGLIHGRMKAAEKQEIMRRFKAGELQL
LVATTVIEVGVDVPNASLMVIENPERLGLAQLHQLRGRVGRGKVASHCVL
LYHAPLSKTAQKRLGVLRDSSDGFVIAQRDLEIRGPGELLGTKQTGIADF
KIADLVRDQHLIPQVQKLARYIHEQHPNNAKAIVQRWLGQRENYSNA
>PBPRA0081 SO2276, transposase and inactivated derivative [Vibrio vulnificus YJ016]
MKTILKIPGHIGLESVDVWFQDEARFGQQNTTTRVWAKTGTRPRVIKQQQ
FEYAYLFGSVCPSRGIGEAIVVPWSNKDAMKLHLQQVSSATEKGRHAVVI
MDGAGWHTEDTAHSFHNISIIKLPPYSPELNSIEQVWSWMRQHHLANQAF
KDYDEILDKVCSAWNSFLSDTKRVTRMCARSWISLTS
>PBPRA0078 SO2276, transposase and inactivated derivative [Vibrio vulnificus YJ016]
MKTILKIPGHIGLESVDVWFQDEARFGQQNTTTRVWAKTGTRPRVIKQQQ
FEYAYLFGSVCPSRGIGEAIVVPWSNKDAMKLHLQQVSSATEKGRHAVVI
MDGAGWHTEDTAHSFHNISIIKLPPYSPELNSIEQVWSWMRQHHLANQAF
KDYDEILDKVCSAWNSFLSDTKRVTRMCARSWISLTS
>PBPRA0082 SO2874, transposase and inactivated derivative [Vibrio vulnificus YJ016]
MDSLNNIDFKSLASKQTSIQMKMRFLALAHFQDGHSRTQIAKYLKVSRTS
VNKWIQVFLEEGLDGLKEKPRTGRPSFLSHQERQLLAKYIEENAAKPDGG
RLTGHDIHNYITQTFGKAYHPDYIYILLKKMGFSWITSRSKHPKQCDKIQ
DDFKKI
>PBPRA0079 SO2874, transposase and inactivated derivative [Vibrio vulnificus YJ016]
MDSLNNIDFKSLASKQTSIQMKMRFLALAHFQDGHSRTQIAKYLKVSRTS
VNKWIQVFLEEGLDGLKEKPRTGRPSFLSHQERQLLAKYIEENAAKPDGG
RLTGHDIHNYITQTFGKAYHPDYIYILLKKMGFSWITSRSKHPKQCDKIQ
DDFKKI
>PBPRA0122 STM3976, putative tatD gene product
MTGLILTGTSIEESQQAQQMAQQWPQYCYSTAGVHPHDAKSVEDFTLPDI
RALAATPEVVAIGECGLDFNRDFSPRPQQEAVFDAQLALAAELNLPVFMH
CRDAHERFLDILRPWRTKLPAAVLHCFTGSEQELKECLELDLHIGITGWV
CDERRGTELRDIVHLIPDNRLMIETDCPYLLPRDYRPKPKSSRNEPQYLP
HIASVIAQCRQQEAAEVVCNSRATTQAFFVIGPPETL
>PBPRA0152 T3950, conserved hypothetical protein
MTRHKQQTGRNMPNNRRDGFVRIISGQWRGRKLPVHDVDGLRPTTDRVKE
TVFNWLAQDIYQAKCLDLFTGSGGLSFEALSRGAESITMLELDKKAANQL
QQNLTTVGATNANVLNTDSLKYLAQTGTPHDLVFIDPPFRKDLIQNIIVL
LEANNWLTPHAMIYIEAEKELGEIVTPSHWRLHREKIAGQVCYRLFEREK
V
>PBPRA0008 VV0011, Putative DnaA chromosomal replication initiator protein
MSSSLWLQCLQRLQEELPATEFSMWVRPLQAELKDNTLTLFAPNRFVLDW
VRDKYLNNINRLLNEFCGTDIPILRFEVGSRQVVVPSSQIIAPAAPAVTL
APRPLPATRILQDDAPSRSWEPAPSPVQPESKSGYRSNVNPKHNFNNFVE
GKSNQLGLAACRQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIADRK
PNARVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANK
ERSQEEFFHTFNALLEGNQQIILTSDRYPREINGVEDRLKSRFGWGLTVA
IEPPELETRVAILMKKAENHNIRLPDEVAFFIAKRLRSNVRELEGALNRV
IANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMSD
MLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRK
IVQLREESHDIKEDYSNLIRTLST
>PBPRA0210 WAVC, conserved hypothetical protein
MEELCFDNQRIWFDPNLLQEDPKACFDASFWQQQGKVIGSAQGRGTTWFV
QGETLPMALRHYRRGGLFGKLIEDAYVFTGWEKTRCAEEVALLSTLAVGG
VNVPRPVAARATRHGLVYRADLLVEKIDSAKDLVDLLQQAMLPDHVWYAI
GRTVRKMHDLQVCHTDLNAHNILVDSRELVWLIDFDKCYTQEGEAWKAKN
LSRLHRSFVKEQGKRNIHFSATSWQVLCQGYELPDN