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# Ehrlichia chaffeensis str. Arkansas, Arkansas

>ECH_0214 putative exodeoxyribonuclease VII, small subunit
MSINDEYNFEAAIEQLEYIVKELESDEVTLARSVELYSLGKELYEYCNKI
IEDIELKIEIKE
>ECH_0166 conserved hypothetical protein
MQVDVGSEPDHGYHILFKNNGHVISDFRGVQAENFVFDIKNHNLRASFLV
DPMAPFTELDNSQHPHFVVNMHTANECGSDCVHHNEHDHDAHGRGAASSV
AEGVGSAISQILSLSDSIVVPVLEGNASVSEGDAVVNAVSQEAPAASVSE
GDAVVNAVSQETPAASVSEGDAVVNAVSQETPAASVSEGDAVVNAVSQET
PAASVSEGDAVVNAVSQETPAASVSEGDAVVNAVSQETPAASVSEGDAVV
NAVSQETPATQPQSRDSLLNEEDMAAQFGNRYFYF
>ECH_0820 conserved hypothetical protein
MGKIFSVYCPESFLAVVAKFAFDIFNDNSGNSSSVIIIVPNQEDVKLLYG
QLKLYFHATVLAQVKVMSLSDIDQDLLANEHSFVRIMTPIRKLLLLMEFI
KLWNSENGDNYPLSLGYELSSLLNEMHVHCIPISNLECLFDYDLPAHCQK
AARFLSELSKKWKEVLNKDEVLDILEHRSLYIGNLIKYLQDEVLNCTVIF
AGMVFDNFFVNFIQELYKLPNSRIIFPYVDISIDEKDWQLLEECHYQYYV
KSLLDILKVNRNDIVFLGEPNHSVFVSSVFNFNLFLEKYHQHEIQNYSDY
SRVKLITCISDEEEAQVVSMLIKENVNSSPIVFTNNLLLTKRINSIVNAE
RLLDKPNVGYLILSFILHTLEVVMSKWNPIPLLSLLKHPFVTLGYVKEDY
DALISSFELKVIRSYSGYDFFSMENNVKEKVPDLLPFWEKITSVILPLVK
VKHDVISSIVKAHIVCIQNLLEGNLVIDSNGYSKIQEFFDDLQNSCNGIK
VYGMDVYYEILTSVLYSSFSLENYKLSTVNLFKRGIVIFAGFNEINYGVN
SCGTLLNRWIRTKLGLPSIQREKGYFAYLLHSFFYADKIYITQSLKSFGK
INEESIWIRRLGILAKLYDIENLKCEIYSKISDRFSCDDTKSLAYLRPQP
NPDINNRVIAFNVLSTTSLETLVKNPYVFYLSNILNILPCKSINEKFSMR
DFGIVVHNVLHKYLLCNNNQHRYEDLVEIAASELLDKYKDFPQVETILWP
KFQKIAEQFFEINLERAHYVDEIITERFFSWEINSNIEVISRCDRVECLK
DGSVIIIDYKTGAIPSQSDINYGVALQMIIQALTVKQSLKKEISGLMYWK
ISSEDMRIVPIDNYTELIKKLEVALKQLILDYVEFMKPFTASCDMSKYAD
YDLITRVKEWGYFI
>ECH_0558 putative lipoprotein
MFRRNILNVLLVLIFCFVISCSNKSRYQFSKKYSPVYNPDGEAFDSDVGF
SRAYSIYKERRNALVSGIDESSKKVSVRRKVKPKVQVRDVDLLKEYGDLL
KEENCDLMVDGNGVNLVDVAGAKFIDPIENDDDVIDHDNRHVDVKSSVVK
TKDKNKLQDVKDNKPSDVKLPVIKAEDKNKLQDVKDNKPSDVKLPVIKAE
DKSKLRDVKDNKSTDVKLPVVKAEDKNKLQDVKDNKPSDVKLPVIKAEDK
SKLRDVKDNKSTDVKLPVVKAEDKNKLQDVKDNKPSDVKLPVVKAEDKNK
LQDVKDNKPSDVKLPVIKAEDKNKLQDVKDNKPSDVKLPVVKAEDKSKLR
DVKDNKPSDVKLPVIKAEDKSKLQDVKDNKPSDVKLPVIKAEDKSKLRDV
KDNKPSDVKLPVVENMIIDTSKLNDDGDHKADKKEKGLRSLLKFTKIEND
SKGSDNNVAGNIANDSEEPTFSQPKSDVESPKQVSESDEQKNSHKAVHFL
SFLNEPSEDQNDTTEELQNTEDKKDNLLEENVKISEKDDQQVVISIEEEN
QMLLQSIKKMKEYDEDYSITYYYDDDGMAYYED
>ECH_0021 conserved hypothetical protein
MFFYRYMLFSFILRKMKNLLINLLFFAVFLYFSSFIFIMMKEGIRFAFEY
RDPKNVAIYIYKYLKWCYYNSDSLTYSVFFKAGVSLVIPFWAYLKISKIN
WNEFFRCMFEYICSMFKKNSYGGENLEFRDKTDIDFRQADYREEMYRIKR
NAMMEIEKSINKMTVEILCMKNKKEDCDNVIDKS
>ECH_0793 hydrolase, TatD family
MIVDSHCHLNYFDPSEIKDVVLRAEENNVKLMQTVCTTIAEFSDLVKVAE
SYKQVYLSVGVHPTNSANGESVSVDELVDLAQHSKVIGLGETGLDFYKCS
QVGEQEKNFLSHINASRETGLPVIIHSRNADKRMMEILESEMKESPFLGL
MHCFASSRELAIKAIELGLYISFSGIVTFKSAKVVQEVAGFIPKDRVLVE
TDSPFLSPEPYRGQRNEPAKTKFVVEYLANLWNESLEEVSNLTTKNFFKL
FKKCSEHFHL
>ECH_0536 putative DNA repair protein RecO
MRWQDQGIVIAIRKYGDDQIIISIFTQKHGLKKGLAKYSKKATHRLQIGD
YVNVTWSSRLISNLGCFKYELIKSTLYHYIQDNLKTMCIAFSTVILDQVL
PENEENYIIYNCLDIFINSIQFQDINWKIKYLRLELTLLSELGFGLDLSR
CAVNNTNENLTFISPKTGKAVSKTVGLPYSKSLLPLPQLLYDVYNNYEYK
YSKTDFKLSLNVLGYFFKKHFLTEKNTILIKYREEIIKLIDLRD
>ECH_0158 hypothetical protein
MIGGNTQTPNDYVPIRRHQLSHNSIKSLTKKLFLLNTSIGIVSVIHASFL
IMLFDAMCLQKKPKHTILTLAALIAVISVVSLLLFYVRYTVSKKNKRHLE
SMHANAESFVSLLQDRQLLDNLSHKVHHLQHLAHELESIDEKGVFIEHAS
QRISASRVDVEKQLRNFVKHCEDDISKMYRELEGVTVDMSEVSGILLNPS
FFKENEAGLMSLSERRKLMSQKEHEINLLMKGYCSEILAKIVCIIEMMKL
HQSSSVENKKVSLFSEDDSKVKELIRILVNTKCVLEELDGEEIKYPTFEM
LCNVMWNIGSFLSSMRCMAKESVYKKAENLIQEKGKQVQRFISGILSAVR
KLDVVKQEQGSEATSSEHTMSEEDSIVALRLVQLQSIILKLLFIMQRNKS
YDIHTETCSENSNGPIDSEENPDFAVQNLQSVSCSGIMLT
>ECH_0341 site-specific recombinase, phage integrase family
MKDQKLCIVVNEWVSWIKKERRYATNTVDSYLRDVNKFIEFLYMCVLRPV
TLEDIIGVKVADLRKWFAFRYQANIEAVTNARSLSALKNFFRYLSRTYNI
DGQAVFCLSRPKLKSTLPRTLTQSHIQKIIDYYALLDTDWIVKRDFALIV
LLYGCGLRISEAVNLKFQNIRREELLIIGKRSKERILPILPIVRQSLDEY
VRCCPYHMELNSVKNEYVFVGVRGKKLKRTYFANRIQKICKEIGLPDVIT
PHAFRHSFATHLFLGGADIRSIQELLGHANLSTTQIYTHLDHKSVIDHYK
NFHPQVIKKNS
>ECH_0860 helicase, UvrD/Rep family
MEDYITSLNEDQREAVININGPILILAGAGTGKTRTITSRIAYIINNNFA
LPSQILAVTFTNKAANEMLSRISELTPVYNIWLGTFHAIAAKILRQHAEV
VGLKNDFTIINTDDQLQVIKNIVNDMHPEYASDAHKIILNKIQRWKDRGL
IPSNITETELYKPINTVALSTYHIYQERLKFLNCVDFGDLLLYNIQIFTT
QHNVLSHYQEQFKYIMVDEYQDINTIQYLWLRLLAQKYKNLCCVGDDDQS
IYSWRGAEVGNILKFSDDFPNAKIVRLECNYRSTSNILDVATAIINNNKS
RLGKKLWTTNEKGQKVNLMKFWDSKAEAQYICEYIKNLHDYQFNETAILV
RAGFQTRIFEEYFIKYSIPYKIIGGTRFYDRQEIRDIIAYLKITVNPNND
IAFERIINKPKRHIGASTLNKIYLCAKQNNTYFLNAAKILISNNQLPDKA
SRSLNNLLNKIDSWKESLSSDSISNTVKMIAYDSGYVDMLENEGENGLAR
IENIKELFSALLSFNDVNEFLEHISLVTETDSLNYNDNYTYIMTLHAAKG
LEFPIVFLPGWEEGVFPHEKSLQDRTGEALEEERRLAYVGITRAREQLFI
SCVAVRDINNWRQQMKISRFIKELPAEHVQVIKNISSYY
>ECH_0076 putative DNA replication and repair protein RecF
MSSIEKSYINNLRLVNFRNYINLELDTSSKSVVLLGKNGAGKTNILEAIS
LLSKGTGIRGVNTESMQNSLSNSPWSVSYQMHTQNGIYPIAISRNHNKRA
ILISNKNQSYTTLHKITSIIWLIPQLDHIFLKSQSERLRFFDRIAHIFDT
KYAIHIIKYNKAKQERSKLLYNNSIDNFWLSSLESIIAENGINIARIRFN
VLQTLQNTLSQNSKSHAFFKAIIKIQSQVFNLLDQENSIELYKEHLKNNR
SKDSLSNLVNFGVHNDNFQIFHSEKNLIANYCSTGEQKILLLSLILSSVF
AKQNIGEYPILLLDDVMSHLDAYHQEKLLEIIRDIKCQVWLTDIDLTQQN
FTKHKEYFKFFHVANNTATLLQ
>ECH_0856 endonuclease III
MNLLECDVKCITWLILHDRHVCKSRKPLCSQCVVQDLCEYESKSL
>ECH_0211 putative methyltransferase
MLRITSGKYRGRRIFSDKLLSARPAMSIIRESIFNIILSRMSIQGCKILD
LFCGSGSLSFEALSRGAESVLLVDINHYNLSLVKRTSEYLGVVNNVTLMC
CDVEKLPLATDQYDIVFVDPPYTNPNLVDMTLNVLIKLNWVKSSSIVVVR
IRKKVVFVCPIGYRIMVERTYGISKVIMLQREF
>ECH_0746 topoisomerase DNA-binding C4 zinc finger domain protein
MDLISNGKINWKEVLHQFWFLFIDNVNSVKKLEFTEVLKVISCEMENYIF
SSDKSESSRVCPVCNDGTLELNISKNGIFLGCSKYPECKYTKNVGSGIVD
DTDNTQYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSGKRAAIPKNID
ANLLDLQMAEKILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVK
NEHNFLDISIENAINIIANNSTSGVIKSLGITEDNKEVFLTLIMILQKID
HALYDYLGAK
>ECH_0568 phage minor structural protein, N-terminal domain protein
MLNFNKTLSKYYSIVACIAFFMLLVLLIVHLIRVFLKKESVIGHLVTGIL
ALSLLSIILVFGSKYLSDHLEFKNKLLVDLFTEEHKEKVEVQQIGLNEDF
ERSIMRLLELKKLALEDISVDFAESTQHSQSILEKYDREIEHLEALQRRQ
VEIIELSNSLGDKFQLQGWEYDTSLKHIQDNFIEHIKHERYSHYCFCCYL
HEFEVGDSVDFDELSPRVSSAMIYITSSPPITCIFKSAGTLLTAMGKLDA
DDNTLFVEYCQRLYNFDCKMALQIEISLSNRLKCDTYTYNHIDYWINSTR
SYYRQRDTLAIALQEGKHLLTSLADREYSDTVSSFKSRGIESTISQLENT
LNTQLPKGEIDKIIEGSNPIMQKIVRELNFFGKDRMETLNNVQSELPETL
LGRKIIDVIEAEEELKSLIDKKYNLSLEDGPKGKIRQMMCYLQSRFDEVK
DGLLAYSPMLSQDISQIQALLDLDLKSSPLNLQFEGQPLNLEDVETQITY
LSKRLFREEEDQIELLQCVQDAIQCTNGKMPPDLEENFLLKSLDIIIKYY
SDFLQGIQTVFSNQSVAKDEVVYCEHLLNTKSASLQKIFDILYTRYQYLE
ENYCNLEEASLKLSKVQTLNAQWLVAFKNVEHVHILFEKLLKLESQYSAF
QYMVTRLQELMEAVLGVRDGSSYLHLLDISEDEKSSFLAELSQQKEPIEL
LKLLSMKKVEFSMLKSEKLNQLDGKVQAISKSLFTFIDKRDEILVSPIVV
QHLFNEGRMGVHFISKLEKLKGTLTLLSNETRQLIFGEYVNDIDYIIDWI
RGAVNVLYNNDNISVQKGEIIKNYLEYLQQNFLIHDKLLNLFNLKKEIKN
KKESLLPILDRLKIALVQNEELDGELVNLKKEIDDLICQVNRQMLLIIEK
DGEFKEFVELVSGLLNRIDHKDDIPEFLYCMEIFDDSLAKLERGIDCTGD
KENYTKYILENLRNISRLSSELKAKQTEKLPLGGEQSELIEELVSIGQQV
NIKDQLSVLDDLYSFLDVAKYLQEEFNSLYKEAIESVLEIVDVEEEDKSS
FVELVNNKLKSLGNSFSSSEVVSSFMHQERQDVSKLGRLESYISILKEEP
NNLKQLADQLLKFSSFTLPFTGERLHKTLQDMTTLNTLYEVTDYLKTYIS
KSRYIELDQLEGELRKFVEYMINTVKSILPPLHEYEKSTCGCKSCQRVEQ
EMTLYFKIANDLDDLQSLLQQERKIITFGAIQKFQEICKNMKSMFLEDKD
LVDSISNILLHSEHCKKMLGLDSYTTHFLLYIKFLIYSVIEVGFSIEQDM
VMELNVKIYRQEVLVSELKANLRKELDENIRNLLDQPIYYPKDLINVRLI
KRRFIDNGIIFDDLMKILEDSVKEKVQCSSSALVSLMCKERIDSMECLID
TYQSEKVSYSYKLKLYTAIQEFMDNSVDQRNIQYLKEIDDGIRQVPNVLL
FCPGNILLKATDIHAL
>ECH_0829 hypothetical protein
MKGAVKLILHYIPHQYTMSSILDNKKHNIQTTNAYYHNPRLLNMS
>ECH_0387 ATP-dependent DNA helicase, UvrD/Rep family
MNNIATNPFYSFIWISASAGTGKTKILVNRVLRLLVTGHKNILCLTFTNT
AAHEMTERIHSIISTWAILKNEELKKALKDIIPTNITPKEYKRARELFNN
LQNVSLSIKTIHSFCYQLISTFPIETGIAPDCSIKDFSESFTKIFHKLLH
DPTTKHHLSAISHEITEATIYDLLYKLLNKQHYNFNQNSIYKKLNINNIN
NTETYQLFPTDNNTLNHLTKILSEGSIRDKKISENLVKWSNLSQKYKLQK
LNKYVKIFINLPSLEKKSISSIITKKTLTNSPEIEKIVSDIQEEILNFIK
TFHTNKIAERTIHLIEIAKCFTKLYQQDKQKLNYLDHNDIIDLALNLLKN
PTYKDWILFHLDSKIDHILIDESQDNSIKQWSIILQLCHEFFSGIGTTEE
LRTLFIVGDIKQSIYGFQNARPDYFNPMCHYFTQQSTQYKHKVLHLTQSF
RSTPPILKLVDKVFNNFCQEISFSTTKIEHEIFRKNDPGYVEIWPIIDIK
NNKNFSLDFENRTDLDTNLLLASTIANKIHSWIINKRILLAKNRPITAGD
FLILVRHRTCFIDHVITSLKKLDIPTLERDKFKIMDYTIIQDLVNLGEFL
LLPENDLALTGLLKSPIFEFNEKQIFDLAYNRNNTYLWEELQSKFSTISN
YLKQLISVSQLHSPLNLYHHIISEHKHKFTKRLGQSNTKIIGEFINLLIQ
CESHNINSLQAFIHWIKNTNPEIKSDINLTKDYVKIMTVHNAKGMQSPIV
FLSDTTTIPKSDTQLVFDEEYTPFWIRNDINDFCENLKSQQKTNEYNEYL
RLLYVAMTRAEDELYITGISPIQNKSWYSIIRNTDYTCKKKFIDLQPMIQ
EKAEVLYLDE
>ECH_1114 dehydrogenase, isocitrate/isopropylmalate family
MSIPITVAYGDGIGPEIMEAVLLILSEAESGLVVETIEVGHNLYKKEWSS
GIAPSSWDSIYRTKVLLKSPTMTPQGRGHKSLNVTLRKRLGLYANIRPCI
SYHPVIKTRYPNLNVVIVRENEEDTYTGIEHRLTNDTYQCSKVITRSGSE
RICDYAFHYAKVHNRKRVTCLIKDNIMKMTDGIFHKSFSKIAENYPDIES
DHYIVDIGMAKVASNPENFDVIVTTNLYGDIVSDIVAELSGSIGLAGSAN
IGNNYAMFEAVHGSAPDIAGKNIANPSGLLNAAIQMLMYLKQFDKAQLIY
NAFLKTLEDGIHTADIYQSQVSKKKVSTMDFAKAVVENFGQSPSQLPKSM
FQDNVDRTGVSYTYEPSYVTRVLVGVDITIGCDGVGLDFKQLINNLQNIT
HDKLELVLIHNKGLEIWPDESVSVNLSYMDQVCCRFYMKSKDDKIMNEHI
NQLLFDIEQKKIDVVKMEKLYLYNDQPGFFTM
>ECH_0477 conserved hypothetical protein
MLNSLLVFDIETIPDVDVCRNLLSDFDETVELSEKREALINYHLDITDGK
NPFLRQPFHKVVAISFLKADIKKMGEYESFHLQEIRSGGKIDSVEKDLLK
GFFQYVSSLRPRFVSFNGRTFDFPVLKYRAMVHGIQAGCLYKIGDKWNNY
FQRYSIDWHCDLLDYLSDFGTSARIKMNEVCSVLNFPGKFGLDGSKVTAL
YDSGKISEIRDYCETDVINTYLVYLRMMHYQDRITTLSYNDSINDLLSYL
DSSGREHFKQFRIEWDKSCGGNFYL
>ECH_0460 conserved hypothetical protein TIGR00250
MLYKNVDEFIKVIDKTKRIMGLDFGEKKIGIALSDRTNLIAIPYSVYVRR
SSRKDLGSLYSIFVENDVGSIVIGWPLELSGVENELCQKVVMFANRIITR
YKINICLHDERYSTAMATRLAKLANIKRKESQAIDDKISAVLILQQVLDI
IKVYQM
>ECH_0056 putative exodeoxyribonuclease VII, large subunit
MTPEFTVSEITKIFQNFVHETFTHIKVRGEISNLSQPKSGHTYFTLKDDA
AVLNAICWNNTKVEFDLKNGLEVICSGFLTTYQSKYQLITENMLLAGIGN
LKIMLEQRKAKLEKEGLFDQSNKKPLPLLPKITGVITSTTGAVINDILNR
VKSRFPSHIVISPVSVQGNESINQIIDAISKLNNADTNKPDVIIIARGGG
SIEDLWIFNDESIVRAVARSSIPIVSAIGHETDFTLIDYAADVRAPTPTA
AVEIVLPTKTQLIEHINSKFNKIKTTLHYKINKKKERLFYLHNNLIKTKH
QIKVLKLQLSEYKNKIEVLLKILLLNKKQSLNALYNKINKFNKEKTLEAG
YAVLYDTNRNHISSIKKLKSNDIISIELKDGIIEAIIK
>ECH_0074 uracil-DNA glycosylase, family 4
MSDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEK
QASIKENTEDYYLLKAQSLAEQCNTIEQLKSAVESFDGCDIKNLATNTVF
ADGNPKARVMLIGEAPGANEDLKGIPFCGASGMLLDKMLQAIGFDRTTVY
ISNAVFWRPPGNRRPTDFEIAVCKPFVEKHIALIVPQMLVLVGSTACYAM
LDSKNPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLRQPMQKRLAWED
LKQIKRYFDTL
>ECH_0803 conserved hypothetical protein
MDQIIGHTLAKNTLIHNTHIQSWLIYGNRGIGKATLAYRFAKYLTQSTYL
NHYNPDLLTINDNEEIIGIDKIRNIKNFLYLSTARLKYRIVIVDSIDSLT
INATNAMLKILEETPNNSIIILISHNLHEVPTVVRSRCFTLGLSDLNPQE
TQQVIQNNFPHLDHKKISHIYPGTPGMVGQHIDQEIELYKALISILTNQY
NNITIENIITTEISFYKVEHILFTIMLDLAKEILGITTNLSIYKHLIDNI
KNKININQLLIKVSQIQQLISYAKKFQLDKKSVMLNLINTIINLL
>ECH_0913 conserved hypothetical protein
MQLTLFDLEDSYSYHYHDYILLEQNRTTYNMLMNQEWNSFILYGKSGSGK
THLAHIWQKLKNAIFIDQHLINTKKDIGDTISNGNAFIIENIDNIDNELS
MLHHYNYIKENKKLLLMTSSIAPTLLNYHTKDLKSRILHTMSAKLANPDE
ELLKIMLIKLFADKQIHIELKVINYILNNTERSFQNLSNIVKCIDRNLPY
YNNGVTIPFVKSIIEKND
>ECH_0883 putative DNA processing protein DprA
MKINKELSHQELISCLRVIRTPNIGPSTFHALIKLYKTCQHILEVLPNLI
KKSKINNKIHNICSIEAAELEIENTTKIGGKIITVFDEDYPEILRNIHDY
PPVITVLGDSSLLKEKTIGIVGSRNPSINGKNFAYKLSYELANSGFVIAS
GLARGIDKSAHSIIYQQLPTIAVMASGVNIVYPQENIHLYNTIVDKGGLI
ITEFPFSTLPRAQLFPQRNRIISGLSLGVVIVEASIQSGSLITANFALEQ
NREVFAVPGSPLDHRCRGSNSLIKNGAKLVEFTHDITESLQFNNNKPYIQ
QSIFDNTTKSDNNLFEINNAKDTILQYITHSPTEIEEIIASTNLNISSIL
IALIELEAAQKIERFPNNKVALMHY
>ECH_0126 conserved hypothetical protein
MKITSSKLHSFFNNLQLTNNILIYGNDYGKISMYKKKIINHVNTNSEFAI
SNIDFSTVNKNPSTLFIELTTISMFCQNKLIILANGEKSISQELKHVLSN
NIGNNYIIITSGELSPDSTLRQYYDNSRNAASIGCYKDDNDNLSFIISDF
LTKNKVQYNATTLQYLHNVLSQNCNALQPELEKLILYIGNNKNLTIQNIQ
ESLLTEIDPISEDLCVSVAEKNLENFTKFSDVLLKNKFTPIALIRILIKY
FSRLEYLIRTIKNGEPINQAIKSIHPPIFFKSIPTIKKHVSAIPYAEINN
IIKKLVEIEIQCKKSDSNQEVIFKYYLTTMITRK
>ECH_1010 DNA polymerase III, beta subunit, truncation
MSAQLLYDIVKKLPNDIEIKFFIGEDGRLTIKCGRTEFFLPVVDIEKFPI
IENNELQNKFTLQVSELVSLFGKTKFAISIEESRFNLNGLYVHTSNNILC
CAATDGHRLSLTKLSQSQNVLSNFGIIVPKKTVNEILKIVSHGSGNDLIS
ISLSDRKICFEYKEYILISKVIDSTFASDYIL
>ECH_0277 DNA-3-methyladenine glycosylase
MPHYILKKSFYEQSSLTVAGKLLGKKLLFNQHQGIITETEAYIGQDDPAA
HSARGYTKRTSVMFGSPGFSYVYFIYGMYYCLNVVTEQEGFPAAVLIRGI
VLLSENKPNTIINGPGKLCKILQITKEHNNTDITQKYNFCICNTDINIDN
YICTPRIGISKGKEKFWRFVIPDLTFLLNV
>ECH_0093 conserved hypothetical protein
MFTKKNYKRVIYNIVGYLGEILIIWFLKCKGYYIIKHRYKCILGEIDIIA
CKNKYLAFIEVKTSIFGSEIPITNKQQRSIIKAAKSFITYHTKFEEYNIR
FDLYFFSLSKGLIHIPHAWQEF
>ECH_0884 DNA mismatch repair protein, MutL/HexB family
MSIILLDPRTINRIAAGEVIECPASVVKELVENSIDAKATAISITIERGG
RNLIIVSDNGIGIKKEDMEIAFARHATSKLPDGDLTKVRSLGFRGEGLTS
IAAVGKVKMVSKYRDSDTAWLMVFEGGEKTQELTPDALSCGTYIEVRDLF
FATPNRLKFLRTEKAEVQSIIDMMNKLAMVNHNVMFSLFVDNKQVFKYLT
QQSNIDRLSEIKTLGMEFCKNSLPVNVKEEQIQLSGYIGSPTLSRGKSSL
IYTFVNSRPVYDNLLIGAVRYAYSDFIEKDKYPVVVLYLDIPCDQVDANV
HPNKSEVRFQDKKLVYRTVVNAIKEVLSINLNTKLKSISEFENDHFVHAS
MVNSRNIGNSVSSEFFKCFQNRKPLLNNDVQKYSSKNVETDDQSLLDTNV
SFCTDSKMITNKLKEERVYENSREHINKGDSKIEVSNFDILGEKKNFVNL
ANNLLQESPSIDSGKFNTSKKVPSDSLIDTYPLGYALCQIHSRYIISQTQ
DSIVIIDQHAAHERLTYEYMKQVMAKEGIKRQILLIPEIIEMNNHLDLEL
LVEYKEKLLKLGLLIEPLGNLSVIVREVPALFGSFDVKSLIINIVDSIME
VGDTLFLDDKIKDICGTIACYSSIRSGRKLKIEEMNAILRNMENTAHSGQ
CNHGRPTYVELNLVEIDRLFSRR
>ECH_0809 dnaA, chromosomal replication initiator protein DnaA
MNDGGTGLLGDCVKEKLQSDNQVIWKDIQVKLHKFYGNAIYDSWLSVLVY
INNEGGKVLLSAPTRFIKEWILVHYLDQILKYWQDEDQSVCSVDICVVNN
QDTNLLVNIKDQQDKEVRNNYDHLSSPLDPRFTFDNFVVGKPNELAFAAA
RRVAESNEPISGSNPLFLYGGVGLGKTHLMHAIAWYIIKSSSKRKIAYLS
AEKFMYQYVTALRSKDIMLFKEQFRSVDILMVDDVQFISGKDSTQEEFFH
TFNALIDQNKQLVISADRSPSDLDGVEERIKSRLGWGLVADINETTFELR
LGILQLKVEKMGINIPNKVLEFLAKNIKSNIRELEGALNKVVAHSSLVGC
SITLDSASDILSDLLRANHKSVTLECIQRKVAEFFNIKITDMYSTRRLRT
LARPRQVAMYLSKKLTQKSLPEIGKSFGGRDHATVIHAVKQIEKLIDTDS
KLRDDINLLTRMLR
>ECH_0451 dnaB, replicative DNA helicase
MELKSNTSKNFGQLMSELPCNIEAEQILLGSMLRDNRICDAVEDIITSDV
FFDSLHRRIFEQIVKINKRGLVANEVSLKMFFDNDEDLIESGGVDYLAKI
AAKASIIFDIKNVANIVVDTYLRRCLISFGQDLISGAYNYDVDNSAVYQI
ESAAQKLFLLGNQGKSDKTYHQFALLVANIKKRIEFAKNNEGTLQGVSVG
FRDLDQLLNGLQKSDLLILAARPSMGKTALALNMALNACKILSNSSQYNG
QHIGFFSLEMSAEQLASRVIAIESDVSSYKALSGKISGEELKKVLDASTK
VCNLPLIIDDSSSISISSLRTRIRRMHQLYNLEAVFIDYLQLVKGTTKRS
GENRVQEVSEVTQGLKAIAKELNIPVVALSQLSRLVEQRDDKKPQLSDLR
DSGSIEQDADVVMFLYREEYYELRKQPSEGTAKHVEWQERMNSISNVADI
LISKQRNGPIGNIKLFFEAEKGRFRDYTAKYNPADFNF
>ECH_0922 dnaE, DNA polymerase III, alpha subunit
MSQIFVHLRSHSDYSLLHGMIKIDSLVNLCVQYNMPALALTDSGNLFGSL
EFSDYASSLGVQPIIGCNIMMSYNGDSIGELVLLVKDQIGYNNIVNLVSN
SFKDSQSNKVNRVDLEKLIDLKDGIIVLTGGHDGFLSQLLLGNVIDYGII
DKLLLAFNGNLYVELQRHGMEEEKIIEKTLVNFAYEKDLPLVATNDVLFA
KKNDFLAHDVLSCISDGNYIAQEGRKMFTEEHYFKSSDEMYRLFKDIPEA
VSNTVLIAQRCSFMPETRKPMLPHFPCSSGKNESQELISQAINGLDNRLK
SKSLSTEQVSKYYERLHYELDIIISMDYAGYFLIVSDFICWSKRNDIMVG
PGRGSGAGSLVAWSLQITDLDPIEFGLIFERFLNPDRISMPDFDIDFCQE
KRDYVIEYVRKKYGYVAHIITFGKLQAKAVLRDVGRVMQMPYFQVDRICK
MIPHNPVKPVTLSEAIEMDKNLQKEQDDDETVAKLLEISLKLEGLYRHVS
IHAAGIVICDRELEELLPLYYDSTSSLPITQYNMKYTEKAGLVKFDFLGL
RTLTVINQICHLVNRGGHSVDISRIPLNDRKTYEMLSAGDSVGVFQLESS
GMREVISKLKPDNINDIIALISLYRPGPMDNISIYIARKHGFEKPDYIHP
ILEDVLRETFGVIIYQEQVMEIAKIMAGYSLGEADLLRRAMGKKIKEEMD
NQRRTFINGAVSNGIEEEKASYIFDLVAKFAGYGFNKSHAAAYALISYQT
AYLKANYTLEFFTASMNLDIMDKDKLEMLCHQAKLHGIEILPPDINSSKV
LFTIEGASSIRYALGALKNVGQHSAKEIVDDVAYKDIWDFIDRVSTKCVH
KRILESIIKAGVLDSIHSNRKQLFESVFLFLDIIEYNKYNANFNQFSLFN
DKNHYKLSETDDWTKEEKLNNEFSSIGFYLNHHPMENYKYLLDKLNIGFI
HYDDKSSYNNVIVGIISNVKVRSTNKDKFAVVTLSDPFNIHEIVFYNGNI
IEDNKDLFTTGASVIIEMDNTFYSASVRLLGKNIYSFENKISSIIKTMVI
HVNAKNSVVIKELSSLLQNRGSTVVLIDLVLPNDHVTIQLPNSFLVTPLI
FAQIFKLNWVKDIEINSILV
>ECH_0761 dnaG, DNA primase
MNVIDIIKSKIKLSDVVGQRVKLTKRGNSVIGLCPFHGEKTPSFTVNDEK
GLYYCFGCGANGDVIQFTSDINALDFKGAINYLAEIYGIDLPQSTNNKTS
ITPILDAATLWFEEQLRNNHVAIEYIRSRKISNDTVKKFRMGYAPTYGLG
KYLLSLGFNIDDIKNTGLLNSQNQDYFYNRVIFPICNSSGNIIGFGGRSI
ISTQNPKYLNSKGSAFFQKRENLYASHFAVREAKKQGKIIVVEGYMDVLM
LHQMGISNVVGLLGTSMTSEHVMYLWEITSEIIVWMDGDIAGKMASIKSA
SLALSLIRPGCIIKFVDVFTGKDPYDICINDGVDSVIALLDSAKLLSEFI
WDYELARVNVNKNSIMPEQCVMLEARIKHYLSQISDNNVVKYYKKYFYSQ
IRNLQYSKDKSKFLSTDNPVSKVDNRLKYVSDEFFLEEYNQLRVVYVIME
FPELLDDPIIFDQFSKFNISDKNIYVLQQNIINIKVTLCNHVISKEVLLS
ELKKNNLDEIVNFVIKRMSTSNFMVLQDREYSVDVSKKEIEKIMLLDHLQ
CIQKEILDLRLKGQRDLAERLSNQAQEIDNRLRELWNY
>ECH_1009 dnaN, DNA polymerase III, beta subunit
MNFFVSKDKLLQALSYINSIVEKRHSIVVLSCVRIEARDQEIKLTSTDLD
ISIIASITAHVNVNGVVVVSAQLLYDIVKKLPNDIEIKFFIGEDGRLTIK
CGRTEFFLPVVDIEKFPIIENNELQNKFTLQVSELVSLFGKTKFAISIEE
SRFNLNGLYVHTSNNILCCAATDGHRLSLTKLSQSQNVLSNFGIIVPKKT
VNEILKIVSHGSGNDLISISLSDRKICFEYKEYILISKVIDGTFPDYNSI
IPRSHDKNVLIESETLSNAIDRVSVVVFDKVKVIKLRFVSNKLILSAASS
DQGDAREELEVDYSGEDMTIGLNARYLMEALYCIKGKCLLSFYDAGTSVL
IQEEENIDDFTYIIMPMRI
>ECH_0014 dnaX, DNA polymerase III, subunits gamma and tau
MGCIAHFLCYHSTMSFALKYRPSNFKDLIGQEVLVRVLHNAFHLNKIPES
ILLTGISGVGKTTAARIISMCLNCISGPTSDPCNTCQNCISIKNFNHPDV
IEIDAASNTSIEDVKVILENSRYMPISSKFKVYIIDEVHMLSNSAFNALL
KVLEEPAPYVKFILATTEVKKIPVTIISRCQRFDFQRISTDKLVDHLKVV
AKKENVSFDEESIKLIAYNADGSIRNALSLLEQAAIYSNKILSENITKEM
LGYVSRHTLLEIIEPLIIGNATEALNKFEEACNSYNSVIILDNMLQIIYE
ICYFSITKKDNSTSDNSIITYIKNEKILSPTFLSRLWQMLFKGIQEVKSS
SCIKQAANMLIIRLCYLSSLPSPKQIIDKIQGKINNTSDINRKALLELLK
SNNMQDLYNQIYESESEVKNYKDEALNIETNQALSKDFHEDSLNFFNNST
NKKCNVPIEQNFDINKSSNPCYNQHLDPTVCNILQEFDGAKVINIENIKK
NNNKE
>ECH_0858 gyrA, DNA gyrase, A subunit
MSDVNNVIPVSIEQELEDSYLSYAMSVIVSRAIPDIRDGLKPVHRRILYS
MYKSGYDYGKPYKKAARVVGDVMGKYHPHADAAIYDSLVRMAQDFSLLLP
LIDSQGNFGSIDGDPPASMRYTEARLAKAAHFLLNDIDEDTVDFRPNYDE
NEVEPVVLPAEFPNILVNGAGGVAVGMSTNIPSHNLGEVIDACIAYIDNP
EITFDELINIVRGPDFPTGGTILGDAGIRSAFMTGKGTIIIQGKTHLEDL
PSGKQAIIIDEIPYQVNKAKLIERIHELIKEKKIEGILDLRDESNKMGIR
VAIELKKQVSHQVILNQILGLTPLRTSFSINTLVLDNNKPKVMSLPDIIS
TFVEYRKEVLTRRTQFRLRKVRERAHLYIGMYIAVLNIDKVIAIIRSSRD
TAEATKRLLECKWDALTSVREMIELVADSKSIVIDNVCQLTGVQVKSILE
MKLQRLTNLEKEKLELDLKSMVSMIKQYTELLKNKESLLQLIKDGFKEIK
AKLAVPRRTTIDYSHFETDIEDLIPKEDMVVTVTMSGYIKRAKLSNYRAQ
KRGGKGRIGQAIKEEDVITNLFVVNTHTSVLFFSNIGRVYKLKVYKLPLG
EPTSRGRSLVNIFPLSENESITSVMPLPDNVEDAEILNIVFATASGNLRR
NALSDFQYVPSNGKIAMVLDTGDTLISVKVCKEEDHVLLSTRLGKSIRFS
VSNVRQFKGRMSDGVRAIKLSSDDNVISMSVLLAMDIDSEKKDLYLKVPL
DKRMCVKEEGVVNGGIAKILCDLGLEQDIFVTMVQNEQFILTVTENGFGK
RTSAYEYRTTLRGGVGVVNILTTARNGNVVASFPVESNDHIMLITDKGKL
IRIAVSDIRIIGRSTQGVTLFKTEKREKVVSVAKIIDAKDNSDIDGNI
>ECH_0620 gyrB, DNA gyrase, B subunit
MDDYNASSITVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVIDNSIDEA
LAGFCNKIDIVIQSDGSVSVVDNGRGIPVDMHEDEGMSAAEVIMTQLHAG
GKFDHNSYKVSGGLHGVGISVVNALSSWLELTIWRNGKEYFMRFEDGITV
KSLSVVGENTTKKGTKITFLPSKNIFSSINFSYSTLENRIRELSFLNSNI
NMNLKDLRGAQILNSSFGLKDNSKVNDIEDRGTAAFVKYLDRNKTAVTKV
VHIEGIVLEHGISLELSMHWNDSYYENMLCFTNNIRQKDGGTHLAGFRSA
MTRCINNYATNEGFLKKAKVNILGEDVREGLTCVLAIKLPDPKFSSQTKD
KLVSSEARTAVENIVYEKLTNIFETNPKLATSIIERIIRSAKGREAARRA
RDLIKSKNGFDFTILPGKLADCQEKSPELSELFIVEGNSAGGSAKQGRDR
RSQAVLSLKGKILNVERASLDRILSSAEIASLITAIGSNIGTENFDIEKV
RYHKVIIMTDADVDGSHIRTLLLTFFFRYMREVIEKGYLYIAQPPLYKVT
KHKKEFYIKNDDMLHDYIINNAVKDLTLNAGESYSGNSLSKVLHQCMNIS
KITKSYDRVIPQHVLESLIIFFRKHNFDSAGAISDHLNKVFCEYEWSVEI
PKEDEISIFRLSHGLVDKYYINSAMMNSEDIKHVIAMCDGIEDIFYNMPI
LSTKDNNIKISSPTSLVDNIIEFGKKDMTLQRFKGLGEMNADQLWDTTLN
PETRTLLKIKIADCEAADSIFSVLMGDFVEPRRDFINNNALNVQNIDA
>ECH_0804 hup, DNA-binding protein HU
MSKDMVVRTLMGELGLTKKVSSQAYDLVMLSIQNALETSHLIRLHNVGTL
HVIQCAEKKYHNPKTGKLETLAPKKRVRFRSSKKLSNAINLLDN
>ECH_0162 ihfA, integration host factor, alpha subunit
MTQTLTKSKIAEVINRDVGLSREDASSVVGEILDEMLNALVKDRILKISS
FGTFKSYKKKARMGRNPKTSEEFVIKERYTVSFYPSILIKHSINSDDSTE
>ECH_0400 ihfB, integration host factor, beta subunit
MLKSHLIQHISKKNPSLSEEIVSKILNIFFSLIVDYLKNDCRVELRGFGS
FTVRSYNIKTANARLAKSKYKKVYFRASSKFIKIINQ
>ECH_0301 ligA, DNA ligase, NAD-dependent
MVDQEKAKLELDKLNKQIQHHDVLYYVQDNPEISDAEYDELCRKRNLILN
AFPKLTQSNDYQNNIGSSPDTKFAKVKHEEKMFSLDNAFNQQDVEKFITR
TKKFLNINDNQSIPLSCELKIDGLSFSVIYKKGEIYQASTRGNGYFGENI
TTNVKTIKNLPHIIHNAPDLLEVRGEIYIDRCDFIQLNNDGNNFANPRNA
AAGSVRQLDHNITAQRKLKYFMYTIVNTACLTQEELLYQLKIWGFCVNEH
TITTDNIEEAFNFYNQVYNNRSNINYDIDGIIYKVNDIKSQHILGTTSKS
PRWAIAYKFPAAEAKTQLNKISIQIGRTGVLTPIAELSPINIGGVIVTRA
SLHNKNEIERKDIREGDYVIVKRAGDVIPQIVDVDKNLRTQELTKFVFPT
TCPSCGSSVYQAKQEASIYCTGELFCKDQILEKIKHFVSKDAFNIIGFGK
KQLLFFYEQRLITNITDIFTLEEKISNSDVKLESLHGWGEKSMSNLFSAI
NNSKVISLENFIFALGIRFIGKYIAKILANHFSSYETWYNEMLKLAQNED
YSLNIQQIGSKTIGSLKMFFSQPHNLNMINDLVKHLTITDTQSSSYLSLI
HGKIIVFTGELSSMSRSEAKIRSETAGAKVSSSLSKNTDFLIAGNNPGSK
YKKAQSLNVQILTEDLWLQYTQSSEN
>ECH_0250 mfd, transcription-repair coupling factor
MNNINKIFNIPQTLEPLVIIKMYIKKLIHSAIYIVNQETQLHNLASIFKF
YVPNLEIIIFPAWNSIPYKKNSPHNSVMAERIKTLYSLITRHNDNPYIII
STINAITQKVLHQNIILQSVLKITSLQNITKNHIEDYLTNHGYSQYSIVQ
DIGEFATYNNIIDIFPTTYKNPIRIHLNNNLIQSIHYFNRQTQLIDNNSS
LNEVVIYPTSEIIKQKKNIDIFSKTYKTKPNQDQNLLNTIISGKKHIGEE
NFLPLFYKEELQNIFNYISQNTTLIFNDKLINEIKEYNNQIYLNYRSQLS
YQVPPPQLYVDSEEFKIITKQFHKTIFSQSDNTSNNSAYTDRNIHTSSFN
ITEKIQNVPNFKTLVQNKQIDIFEILTQYIKTTCHTKKLIIACYSTGSLE
YIQNRLRTLNIKLCKIENYQEICSSYNIAILPIYHSFISKYTIVIAEHDL
LYKQETTNKSNISNIISNDTNLDIGDIVIHKDYGIGKIVALETTKVFDSY
HDFIKIEYYNNDKLFLPVENINLISKYGQQNVNVTLDKLGSTSWQQRKTK
IKNHIKKIAKELLTIEAARRLSTGKSFFPDENYKHFCNEFSYTETEDQLQ
AIKDMEHDLSSGKIMNRLICGDVGFGKTEIALRAAFLVASQNYQVAIIVP
TTLLCRQHFIVFTERFKKFPNIKIKQLSKIVARSEIKKTKESLSCGQVHI
IIGTHAILAQDVTFANLSLLIIDEEQQFGVKQKELLKKIKTNVHVISLSA
TPIPRTLYMSLCGIKDLSLIKTPPKNRLAVTTYTTYYEETIIKDAIIREH
NRGGRVFYVCPQISNIKSISDKIRKLVPEIKMNTAHGQLSPTQLDTIMND
FFDGKFTILLTTSIIECGLDIPFANTIIIHNADMFGLAQLYQLKGRVGRS
STKGFAYFILSEKATNKSAIKLEIIQSIDSINSGFNLSLHDMDIRGFGNL
VGEEQSGNIKDIGIELYQQMLEEELNIYSEYPKDLDHINININVNIRIPE
HYIQDIGLRMRVYKKIGSLKTKEDIDNYYIELTNKFGKLPNEVENLLNTI
YIKQLCANIGIYEVEQIKNSILLKIDSNTTLKQKILNYFINNPLTFKIQN
NSILMLINNSSNCIISFIIHHISKINLLNKKAIL
>ECH_0602 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVEIVCRALSSQILGKTILDIEVNRYDLRVPVTQNLCDIAVNSSV
FQVLRKGKYIVLVLSNQYYLVIHLGMSGNLIYSESYIKQKKHNHVIFHFS
NNNLLIFNDPRRFGIVILLTYSQYIEFFKNFGVDALSDEFNTNYLYNTSN
KRCTIKSLLMNNKFVTGIGNIYSTESLFLAGIAPNRFVKDLSIIECNNII
DGVKNILLYSIENGGSSIKDYTSPFGIRGTFQNHFLVYNRTRQQCYKCNS
SILVIKQNGRSTFFCPYCQL
>ECH_0824 mutS, DNA mismatch repair protein MutS
MNHDSKITPIMQQYMMLKSQYKEYLLFYRLGDFYELFFDDAIETSRILNI
VLTKKGNVPMCGVPFHSSESYLNRLVKLGYKIAICEQLETSEEAKKRGYK
ALVKRDVVRIVTPGTILEDSLLEAKENNYLSCIVNVDHNYAIAWLELSTG
LFYYHTTELHKLDSDLFRINPKEVLISDKLVELDSIYSILRKYKFSVTQY
SGSFFDVSRSYNTLCNVYGISTLKGLGDLKNEEIAVCGSLLEYVKATQKG
NLPQLEFPKAYSKGDFMFIDAAALRNLELFCTQSGDLEGSLISSIDYTIT
ACGGRLLKRCLSAPLACSHAINRRLDIVEFFVNDRTLCRGVRETLRGIAD
IERILTRIKVGKCSPKDLYALKLTLDKIFVLLDLLHKFDSSVVGDFCSRL
GKYDDLCKTLDDVLIPNNVNNVKDGGFINPDYDAQLSEYIYIQSYSNDLI
QELRDKYRNITNIQSLKILYNNILGYYVEVSSSYLISDKDFIHRQTLANS
IRYTTSELKALESKIISARDAAINLEVKIFGQLCTCIIEVADKITMTAHA
IAEIDMLTSFAELAIQYSYTKPIVDDSYEFNIKKGRHPVVERNGKFVAND
IDLSLMQRVHLITGPNMAGKSTFLRQNALIGILAHIGSFVPAQHAHIGVI
DKVFSRVGASDNIASGHSTFMVEMTETAAIINQATDKSFVILDEIGRGTG
TYDGLSIAWSVIEQIHNVNKSRAIFATHYHELSKLDRYLENIKCFCMKVE
EWNGKVVFLHEIIPGSTNKSYGIHVAKLAGFPQSVLDRAEDLMSKLKANE
DLLT
>ECH_0857 nth, endonuclease III
MNRRNINLLFTKFKEHNPHPRIELKYTNSFTLLIAIVLSARTTDVSVNKI
TDKLFEVADTPRKMLDLGEKGLKNYINTIGLYNSKSKNIIALSGIIINQH
NSNVPLDFNTLVALPGVGRKSANVFLNTWLNLPTVAVDTHVFRVSNRIGL
VKESNVLKTEDALLNVIPKKWLLYAHHWLVLHGRYVCKSRKPLCSQCVVQ
DLCEYESKSL
>ECH_0080 polA, DNA polymerase I
MRVFTIIDAYGLLFRAYYALPNLRTSYGLPIGGVYGFINIFLKYIEKHVT
DYLVVVFDTGSKNFRHNIYPEYKGNRPKLPDDLIPQFSLLREAVNAFNIA
SEEVVGYEADDVIATLSKKYCKLQGVKVTVVTSDKDLLQLLKYNICIFDP
IKNKYIEEEDVQSKFGISSNQLLDFLSLTGDASDNVPGIPGIGVKTAAKL
LNDFGSLDNLLLHVHEVKTNKCRESITQYSDQAILSRQLVTLCDEVDICG
DIEKYSFQISGIQELVEFLKKYELQSLMNKVDKFFKVGNASSAVNQNTSS
SDKTMGGDKVIHHEPQSSMNEVDKFFKVGNASSAVNQNASSSDKTMGGDK
VIHHELQSSMNKVDKFFEVGNTSSTVNQNASSSDKTMGGSEVIHYSTESL
KVFLENCKGEGIMAFYMEMADNVIDSVSLSYKDDILLYIDKDHVTDALEL
IKPVLGLNYVLKVIYDVKTLLKVIPDVEIVAFDDIMIMSYILSPSVHDHS
LQEIINYNVKQDVVNVKTAITLLLLHKLLKKNLFVNQLYTIYERVEKPLI
RVLDSMEKVGMLIDIDILKTLSSTFSEKVSVLENEIYRLAGTEFNIASSK
QLGTVLFDKMGIKKSKKLSSGSYSTDAEVLNDLVFNEIEIADKILQWRHF
TKLKSTYTDALGKQINSNSGRIHTFYSMISTATGRLSSSNPNLQNIPIRS
EEGNAIRRAFVARKGYKLVSADYSQIELRIMAHIAGVQAFKDAFFLDQDI
HSITAEQIFCTQSLDKNLRRKAKSINFGIIYGMSAFGLAKQLGISRSEAN
AYIDNYFKSYPEIQSYMNNIKIYAKTYGYTRTIFGRKCFIRDINSSNAAA
RNFSERAAINAPLQGTSADIIKMSMIHLFDKITHGSLILQVHDELLFEIL
EEYVDYAVEVITKVMEGIVKLSVPLKVDIRIGTNWADLVPYSKK
>ECH_0483 priA, primosomal protein N'
MIAEILLPVPINKTFYYTIPENDMFCVGEYVLVPFGARTLVGVILKLNDM
IPSDCNVEKLQLKVVISKNSLPRVNVALLNFIKWVSDYNIVPAGLVLKMV
FSNVVNAKSFSKLKFYAKQNDRCNSVEINLSNEQRIAYNSIVNKISGYSV
IVLDGETGSGKTEVYCEVIRELIKRDSTAQALILLPEIVLTLQLIKRIKH
YFDSYYPVEWHSNLTLKNRKEYWLSIAYGQSLIVIGARSALFLPYKNLKM
IIVDEEHDSSFKQECGVLYNARDMSIVLAKNLDIPIILSSATPSLEAINN
VLKSQYYHVKLTQRFGNAKLPSVRIVDLCKSKMVNVWLSNKLYNSILETL
QRQDQVMLFLNRRGYAKLRLCKACGFKINCKNCATWLVEHKKKNILLCHY
CGYSCPMQDECTNCSDKSSLISYGVGVEKIAEDIVALIPNAKVAIISSDI
SSKDVSVMIDMIMRNEVNVIIGTQVIAKGHNFPRLTLVGIIDADLSLNNS
DLRATERTYQLLHQVSGRSGRFADNGEVILQTYDTNSPLIKSLSSYNREL
FYSLELESRLLTKMPPYTRLIGIIISGKDETHVINVSKQIVKSLPHTLTV
LGPAPAPISFLNRKYRYRILIKVQHNVIIQKLLAKYKEYYAKANKIRITI
DVDPVNFM
>ECH_0363 radC, DNA repair protein RadC
MNIKDERQKQQIGHRKRLRQKLLSKGNKGLLDYEILELILCSAHPRKDVK
PIAKKLIEHFGTFAKVFFADYSQLKQISGIGEVAISAIFCIREALNRILR
ENIDKGTIINQWQKLIEYLRIKIGNGSVENFHILYLNTKYKLLADETQDV
GTVNQTPLYVREIIKKSLFLEATSIIIAHNHPSGDAKPSKADIEITNQLA
RACSDVGITLIDHVIVTSNAHYSFKTHNLL
>ECH_1109 recA, recA protein
MSDSKNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSI
ALDTALGIGGFPKGRIVEIFGPESSGKTTLALHVIAESQKKGGNCAFIDA
EHALDIMYARKLGVNTGDLIVSQPDTGEQALHIVEYLVCSGAIDVIVVDS
VAALTPRAEIEGDMGDQHMGLQARLLSHALRKLTSIVSKANCVLIFINQI
RMKIGVVYGNPETTTGGNALKFYSSVRLDIRKVSAIKDKDVIIGNQTKVK
VVKNKVAPPFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNS
VRLGQGKENAKSYLKANCDTAHEIEQKIRSILASDNEVSCFNAEVNDNLH
EVEETVF
>ECH_0062 recG, ATP-dependent DNA helicase RecG
MHNLSIFSSMYMLPGVNNVVGSLLKKLCGGDKIIDLLFHIPQSYVDRRTA
LSEDSVGKIVTFIGTVKCHGFIGRKRKSQYKIVLDTCIGEVSLIFFNYSL
KYLRSVLKVGSTCVVSGTLIRFLGCLQITHPDYIVTDIKKFQDISIIEPI
YPLIRGLTSKRISKLVKLSVRLLPDFPEWIDEKLLRDNRWNSWKESLIKI
HHPDTLEAVHLHRARLAYDELLSHQISVKMVRKFDYQQGVSIVSKQLYYN
DILNKLPFKLTEGQKEVISQITKSQASENRMVKLLIGDVGSGKTVVALFA
ILNVIENGGQVAFMAPTEILAEQHYRWIRAILSDISVDVELLTSKVRKKQ
NIKKKLQLGECNVVIGTHALFQDGVDFNNLNLIIIDEQQRFGVLQRMRLI
NKSNMADVLFMTATPIPRTLEQVVYGDIDCLRLKDKPHNRLPIQTSIVNI
ERLFEVIAKLQLALQEGNKAYWICPYIEDSELLDIAAAEKRFFTLQEVFG
KDVGLIHSRLPKIEKDEVMMSFYNGNIKLLVATTVIEVGVDIPDATIIII
ENAEQFGLSQLHQLRGRVGRSDKSSFCILLHGNMLSKIAYKKLCILRKFQ
DGFYIAEQDLLLRGSGDVLGIKQSGLSNFKFADIYKDQGLISIAVEQAGA
ILDANKTELGDHFNQLLHMFGYDVSTINY
>ECH_1115 recJ, single-stranded-DNA-specific exonuclease RecJ
MLHCNLENLEYIGVTGALWKPYNVNFRDVLTITQKLGISEIVARVLSTRK
VNIEEINDFLYPTLRSSLPDPFHLLDMDKAIQRICHAIYNKERIVIFGDY
DVDGATSSALIKQYLTQIGVPTTIYIPDRICEGYGPNTQALLKLQEIGHS
LCITVDCGTIAHEPISVAKSVNLDVIVIDHHMGLNTLPDAIAVINPNRLD
ENSPYTYLAGVGVSFLMLVALNKTLKEKGFFTNNNEPNLINYLDLVALGT
VCDVMPIIGLNRAFVKQGLKIMATRQNIGLKVLSDVIGLEDKPNTYQLGF
NIGPHINAGGRVGNASLGARLLSSNSEEEALEISEKLQNFNLERKELEHR
SFNEAVEQAEALISTNTNLIIVAGNWHPGIIGIVAGRLKDKFFLPSIVIS
LDKGIGKASARSIPDVDLGAAILSAKLEGIITEGGGHAMAAGFSIQEDKI
KTLNEFLSQRFHNINKQKVFKVDGIITAAAVNLTLWKELQFLEPFGIGNP
EPRFILTNIKIKNPEIIGDSHIRCLIHDNKTFIKGICFRCTDTELGLALL
ERTAIMLLGKISVNYWKGNENIQFIIEDAITKSHNDHKL
>ECH_0843 recR, recombination protein RecR
MDINKLIAMFAKLPSFGPSSSRRIVLHLLRNKEEIMLPLASGIQDLAFQA
KECPVCFNIDVKSPCSICSDTKRDHQLLCIVEELGDLWAFEKGKIYQGVY
HVLGGTLSAIYGIGPDQLNLDSIVERIKKFNVQEVIIGIGNTMDGQVTTH
YITQMVKELGIKVTRLACGIPMGGEIDYLDEGTLSAALSSRYIIS
>ECH_0263 rnhA, ribonuclease HI
MKDELNKVVIYTDGACSGNPGPGGWAAVLLFDDNEKTICGNDSDTTNNRM
ELTAVIEALKLLKVAYNVDLYTDSVYVKDGITLWIRKWKVNGWKTANKMP
VKNLELWLELDSLANFHKVTWYWVRAHVGDLYNQKADMLARSQIVR
>ECH_0946 rnhB, ribonuclease HII
MPDFSIENEISKLINNKHCTIVGVDEVGYGSLAGPVVSAAVFFPKHDNHI
TYNIQDSKKLTPKKRLEIYNIITPMVKWSIGLAEVHEIDQYNILNATHIA
MQRALRGLNSNIDYVIVDGNKVPELPWNAKAVVDGDNISISIAAASIIAK
VTRDKLMETLHIQFPQYNWNKNKGYGTKHHLESLHKYGKTIHHRNTFAPA
SGITKLYNK
>ECH_0320 ruvA, holliday junction DNA helicase RuvA
MIGSLTGIIEEIYNNYIILNVGNVGYIIYVSHKVLQSCKTGNNIKLYIET
YVNRDNLTQLYGFLDKQEQDYMRMLVTINGINHKTAISILSKLSPEQIFS
AVVSNNKNAFRGNGIGEKLAGRITTELQYKISKMPIEETLIIKEDDSLAA
LISLGYDKLKAFNAIQEIKANFPDDSIQEIIRKALQKLSQ
>ECH_0319 ruvB, holliday junction DNA helicase RuvB
MKNILQSTECLEDQQNVSMRPNLLDDFIGQSSVVNNLKIFINAAYTRKEP
MDHVLLYGPPGLGKTTLAHIIAKELKVNFRSTAGPLLSKAGDLAAILTNL
QAKDILFIDEIHRLNRNIEEILYSAMEDFCLDIIVGEGCGARTLRVDLPP
FTLVGATTRIGLLSNPLRDRFGIPIHLEFYSTEELTKVIQRAAKVIKTNI
SNSGAQEISLRSRGTPRIALRLLRRIRDFMEVTEHNKIITDTFADKALLR
LGIDKLGLDRQDIQYLKFIYDSNNPTGIDTISSGLSEDTGNIEETIEPYL
IKINFIQRTPRGRVITEKAISHLREQEYI
>ECH_0028 ruvC, crossover junction endodeoxyribonuclease RuvC
MKIMGLDPGLNCTGWSILSVSKDIKLIDKGTVVTNSKEDTGQRLRKIHTD
VLDILRLYQVDSASMEEIFINKNPKSSISLCYARGILLLTLSTKDIPVFE
YSTNYVKKSITGNGHAKKEQVSFMIEKILNVKCSGTYDISDSIAVALCHA
YSKKSF
>ECH_0815 ssb, single-strand binding protein
MSTIGVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMRT
EKTEWHNVVVFNEGLVKIIKNCIRKGSKIYIEGSLRTRKWTDQNNVDRYT
TEVILQGFNSALYMLDAKNNTMDNNGISEDYATESFNKENSLNSSCDDII
IDDEIPF
>ECH_0750 topA, DNA topoisomerase I
MSLIIVESPSKAKTISKYLGSKYKVVASFGHIRDFPAKSGSVDPDKDFAM
TYEIISKSEKYVNKLIQVANKETQGIYLATDPDREGEAIAWHIIEVLKEN
NAIDDNVVINRMVFNEVTKSAILESIKRPRSINMDLVYAQQARRALDYLV
GFTLSPLLWRKLPGSKSAGRVQSVALRLICDRESDIEKFITQEYWDIEAK
CCNTEGKQFSAFLSCYAGKKLEKFDIKNEEDAQKLSEEVRSRSYSVINVE
KKHTKRNPYPPFITSSLQQEASTKLGFTAKNTMLIAQKLYEGIDVGGEIV
GLITYMRTDGFYIADEALEHIRSIIVSMFGKEYLPESARKYVKKVKNAQE
AHEAIRPTNITITPGSLSNYLTPEQLKLYDLIWKRTVASQMNSAVIDQVI
VELGSLDKVVTLRATGSSLFFDGFYKVYGHGEDDDSKNNMLPLLQKNDKC
PLDEVVPHQHFTNPPARYNEASLVKKMEEIGIGRPSTYASIISVLQDRQY
VILNQKRFFPTERGRIVNVFLVNFFSRYVEYDFTADLEEKLDLISNGKIN
WKEVLHQFWFLFIDNVNSVKKLEFTEVLKVISCEMENYIFSSDKSESSRV
CPVCNDGTLELNISKNGIFLGCSKYPECKYTKNVGSGIVDDTDNTQYPKI
LGIDAATGQEIYLKKGPYGLYLQIGNDKSGKRAAIPKNIDANLLDLQMAE
KILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVKNEHNFLDISI
ENAINIIANNSTSGVIKSLGITEDNKEVFLCKGRYGFYLKYDKLNVALKK
DTDIEQISLSDAIKLISEKL
>ECH_0785 uvrA, excinuclease ABC, A subunit
MTDLISIRNAKEHNLHNINIDLPKNKLIVITGVSGSGKSSLAFDTIYAEG
QRRYVESLSSYARQFLDSCTRPEVESITGLSPTIAISQKLLSKNSRSTVS
TTTGIYDYLRIMYSKIGTPYSPITGLPITKQSLSQIVETILKLPIGTKIS
ILGILIRGKRGEHNKEIYEIKKQHYKLLKIDGITYDINNIPQLDRNKKHD
IHVIINQISVLENSIDNITENIKTALKIGNGITHIEILDLPQEYKSDTYY
KNQVLVFSENFACPETEFSIEEVEPRLFSFNTSYGSCKICSGIGKKYSVD
KNLVIKNDNLSISEGAIHPIGPIDIKTINYKINSQFSYHYSNIILSLAKH
YSFDLTTPWKKLDDNIKDIILFGSKEVQIPTHYQHEGYKYSRNKPFEGII
NILNNKEDIVIEKLAEQYSSINICNECQGFRLRQEALSVKIDNKHIGELT
RLSVIDAISWCKALPSRLNDQQKHISHKILDEIIKRLIFLKNVGLGYLTL
DRESGTLSGGESQRIKLASQIGSGLTGIIYVLDEPSIGLHQRDNTLLINT
LKTLRDIGNTVIVVEHDEETITNADYVVDIGPGAGQNGGYVIASGTPKEI
MDNHNSITGQYLSNKKIIPNFKKHRTFYKWIEIIGAHVNNLQNIDVKIPL
HAFTCITGVSGSGKSSLINNTLYQHATDQLNNINCIYSKCTSISGLEHID
KVIKIDQSPIGRTPLSNSATYTGLFTHIRSWFAELPLSKERGYTISRFSF
NSKGGRCEACKGDGQVKIEMHFLPDVYVKCEQCKGSRYNKETLEVTHQGK
SIADILDMTVDQAYEFFIHLPLIKEKLDALRSVGMGYIKIGQTSNTLSGG
EAQRIKLSKELSKRSTGKTLYILDEPTTGLHFADIDNLLHVLHKLRDLGN
TIVVIEHNLHVIKTAEYIIDIGPNGGDDGGQVVATGTPEEIVQNPHSITG
QYLKPYLNAQS
>ECH_0173 xerD, tyrosine recombinase XerD
MDNQRYVNIFLEAIVAEKHVSHNTYQSYRTDLLGLCKFIDRNDLLLTDAS
IHELQDYIRFLYEKGYKANTVSRKISAIKNLYGFLYRDNIIENDPTVYLD
SPKLSRSLPKTLSYEEVNILLDVAALDVSPDGRRINAIVNILYSSGIRIS
ELVYLKFREVREALDDGDTEICHMKIQGKAKKERIILLNSSAVTSIQKYM
EVYEYFIPNGYKMSQWLFPGTKFDNPVTRQRVGQLLKNLAMNAGINVTHV
SPHKLRHSFATHLLNNGSDIVFIQKMLGHANLATTQIYTHVASERLKSIL
LKFHPLRNK
>ECH_0675 xth, exodeoxyribonuclease III
MTLKIATWNVNSIRKRLDHLCNWLINSAIDIALLQEIKCTDEQFPFFDVE
SLGYKCYVHGQKARNGVAIITRYPIVGELVTSIFSSDYKSKLCYELSSEN
FIYNCDESRYLECVVLHHNIKIRIASIYVPNGQSIDSDAFQYKLGFFDQL
REHALSLLKKEEILILGGDYNVAPYPIDVYDPEVMDGKLCFHKSEREKFR
SILNLGFTDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDNLLLSPQATD
KLLSCVIHDKLRGLDTPSDHAPVVCELDLSS